Files
ohif-viewer/extensions/cornerstone/src/commandsModule.js
T
James PettsandDanny 1d85f7a74e Instance metadata/metadata providers overhaul (#1481)
* Instance metadata plus metadata provider overhaul.

Fix consumption of wado-uri urls

fallbacks + datatype agnosticism.

WIP DICOMify things.

fix various issues with naturalized variable naming migration.

Remove metadata provider.

Fix consumption of multiframe images and addition of CWIL metadata.

Fix strange build issues.

Fix CWIL style windowWidth to array from naturalized DICOM.

Fix PT, CT, CR and DX issues for cornerstone + DX issues for vtkjs.

Move color palette fetching down to the natuaralized JSON level.

Remove unused StudyMetadataSummary

Remove redundant dicom metadata dictionary.

Working local + json routes.

Fix SR read.

Finished first round of testing + cleaned up debugging etc.

* data => metadata for instance naturalizedJSON

* Update dcmjs version

* Correct github isssues.

* Fix erroneously replaced files.

* Danny's recommended changes.

* Instance metadata plus metadata provider overhaul.

Fix consumption of wado-uri urls

fallbacks + datatype agnosticism.

WIP DICOMify things.

fix various issues with naturalized variable naming migration.

Remove metadata provider.

Fix consumption of multiframe images and addition of CWIL metadata.

Fix strange build issues.

Fix CWIL style windowWidth to array from naturalized DICOM.

Fix PT, CT, CR and DX issues for cornerstone + DX issues for vtkjs.

Move color palette fetching down to the natuaralized JSON level.

Remove unused StudyMetadataSummary

Remove redundant dicom metadata dictionary.

Working local + json routes.

Fix SR read.

Finished first round of testing + cleaned up debugging etc.

* data => metadata for instance naturalizedJSON

* Update dcmjs version

* Correct github isssues.

* Fix erroneously replaced files.

* Danny's recommended changes.

* Update JSON CI

* Update casing of import.

* Fix jump for SR.

* Fix unit tests for measurements service

* Fix json CI test.

* fix: update yarn lock

* Fix local non-encapsulated pdf view

* CI updated to new sucess message.

Co-authored-by: Danny <danny.ri.brown@gmail.com>
2020-03-09 19:03:23 +00:00

378 lines
11 KiB
JavaScript

import cornerstone from 'cornerstone-core';
import cornerstoneTools from 'cornerstone-tools';
import OHIF from '@ohif/core';
import setCornerstoneLayout from './utils/setCornerstoneLayout.js';
import { getEnabledElement } from './state';
import CornerstoneViewportDownloadForm from './CornerstoneViewportDownloadForm';
const scroll = cornerstoneTools.import('util/scroll');
const commandsModule = ({ servicesManager }) => {
const actions = {
rotateViewport: ({ viewports, rotation }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.rotation += rotation;
cornerstone.setViewport(enabledElement, viewport);
}
},
flipViewportHorizontal: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.hflip = !viewport.hflip;
cornerstone.setViewport(enabledElement, viewport);
}
},
flipViewportVertical: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.vflip = !viewport.vflip;
cornerstone.setViewport(enabledElement, viewport);
}
},
scaleViewport: ({ direction, viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
const step = direction * 0.15;
if (enabledElement) {
if (step) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.scale += step;
cornerstone.setViewport(enabledElement, viewport);
} else {
cornerstone.fitToWindow(enabledElement);
}
}
},
resetViewport: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
cornerstone.reset(enabledElement);
}
},
invertViewport: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.invert = !viewport.invert;
cornerstone.setViewport(enabledElement, viewport);
}
},
// TODO: this is receiving `evt` from `ToolbarRow`. We could use it to have
// better mouseButtonMask sets.
setToolActive: ({ toolName }) => {
if (!toolName) {
console.warn('No toolname provided to setToolActive command');
}
cornerstoneTools.setToolActive(toolName, { mouseButtonMask: 1 });
},
clearAnnotations: ({ viewports }) => {
const element = getEnabledElement(viewports.activeViewportIndex);
if (!element) {
return;
}
const enabledElement = cornerstone.getEnabledElement(element);
if (!enabledElement || !enabledElement.image) {
return;
}
const {
toolState,
} = cornerstoneTools.globalImageIdSpecificToolStateManager;
if (
!toolState ||
toolState.hasOwnProperty(enabledElement.image.imageId) === false
) {
return;
}
const imageIdToolState = toolState[enabledElement.image.imageId];
const measurementsToRemove = [];
Object.keys(imageIdToolState).forEach(toolType => {
const { data } = imageIdToolState[toolType];
data.forEach(measurementData => {
const {
_id,
lesionNamingNumber,
measurementNumber,
} = measurementData;
if (!_id) {
return;
}
measurementsToRemove.push({
toolType,
_id,
lesionNamingNumber,
measurementNumber,
});
});
});
measurementsToRemove.forEach(measurementData => {
OHIF.measurements.MeasurementHandlers.onRemoved({
detail: {
toolType: measurementData.toolType,
measurementData,
},
});
});
},
nextImage: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
scroll(enabledElement, 1);
},
previousImage: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
scroll(enabledElement, -1);
},
getActiveViewportEnabledElement: ({ viewports }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
return enabledElement;
},
showDownloadViewportModal: ({ title, viewports }) => {
const activeViewportIndex = viewports.activeViewportIndex;
const { UIModalService } = servicesManager.services;
if (UIModalService) {
UIModalService.show({
content: CornerstoneViewportDownloadForm,
title,
contentProps: {
activeViewportIndex,
onClose: UIModalService.hide,
},
});
}
},
updateTableWithNewMeasurementData({
toolType,
measurementNumber,
location,
description,
}) {
// Update all measurements by measurement number
const measurementApi = OHIF.measurements.MeasurementApi.Instance;
const measurements = measurementApi.tools[toolType].filter(
m => m.measurementNumber === measurementNumber
);
measurements.forEach(measurement => {
measurement.location = location;
measurement.description = description;
measurementApi.updateMeasurement(measurement.toolType, measurement);
});
measurementApi.syncMeasurementsAndToolData();
// Update images in all active viewports
cornerstone.getEnabledElements().forEach(enabledElement => {
cornerstone.updateImage(enabledElement.element);
});
},
getNearbyToolData({ element, canvasCoordinates, availableToolTypes }) {
const nearbyTool = {};
let pointNearTool = false;
availableToolTypes.forEach(toolType => {
const elementToolData = cornerstoneTools.getToolState(
element,
toolType
);
if (!elementToolData) {
return;
}
elementToolData.data.forEach((toolData, index) => {
let elementToolInstance = cornerstoneTools.getToolForElement(
element,
toolType
);
if (!elementToolInstance) {
elementToolInstance = cornerstoneTools.getToolForElement(
element,
`${toolType}Tool`
);
}
if (!elementToolInstance) {
console.warn('Tool not found.');
return undefined;
}
if (
elementToolInstance.pointNearTool(
element,
toolData,
canvasCoordinates
)
) {
pointNearTool = true;
nearbyTool.tool = toolData;
nearbyTool.index = index;
nearbyTool.toolType = toolType;
}
});
if (pointNearTool) {
return false;
}
});
return pointNearTool ? nearbyTool : undefined;
},
removeToolState: ({ element, toolType, tool }) => {
cornerstoneTools.removeToolState(element, toolType, tool);
cornerstone.updateImage(element);
},
setCornerstoneLayout: () => {
setCornerstoneLayout();
},
setWindowLevel: ({ viewports, window, level }) => {
const enabledElement = getEnabledElement(viewports.activeViewportIndex);
if (enabledElement) {
let viewport = cornerstone.getViewport(enabledElement);
viewport.voi = {
windowWidth: Number(window),
windowCenter: Number(level),
};
cornerstone.setViewport(enabledElement, viewport);
}
},
};
const definitions = {
getNearbyToolData: {
commandFn: actions.getNearbyToolData,
storeContexts: [],
options: {},
},
removeToolState: {
commandFn: actions.removeToolState,
storeContexts: [],
options: {},
},
updateTableWithNewMeasurementData: {
commandFn: actions.updateTableWithNewMeasurementData,
storeContexts: [],
options: {},
},
showDownloadViewportModal: {
commandFn: actions.showDownloadViewportModal,
storeContexts: ['viewports'],
options: {},
},
getActiveViewportEnabledElement: {
commandFn: actions.getActiveViewportEnabledElement,
storeContexts: ['viewports'],
options: {},
},
rotateViewportCW: {
commandFn: actions.rotateViewport,
storeContexts: ['viewports'],
options: { rotation: 90 },
},
rotateViewportCCW: {
commandFn: actions.rotateViewport,
storeContexts: ['viewports'],
options: { rotation: -90 },
},
invertViewport: {
commandFn: actions.invertViewport,
storeContexts: ['viewports'],
options: {},
},
flipViewportVertical: {
commandFn: actions.flipViewportVertical,
storeContexts: ['viewports'],
options: {},
},
flipViewportHorizontal: {
commandFn: actions.flipViewportHorizontal,
storeContexts: ['viewports'],
options: {},
},
scaleUpViewport: {
commandFn: actions.scaleViewport,
storeContexts: ['viewports'],
options: { direction: 1 },
},
scaleDownViewport: {
commandFn: actions.scaleViewport,
storeContexts: ['viewports'],
options: { direction: -1 },
},
fitViewportToWindow: {
commandFn: actions.scaleViewport,
storeContexts: ['viewports'],
options: { direction: 0 },
},
resetViewport: {
commandFn: actions.resetViewport,
storeContexts: ['viewports'],
options: {},
},
clearAnnotations: {
commandFn: actions.clearAnnotations,
storeContexts: ['viewports'],
options: {},
},
nextImage: {
commandFn: actions.nextImage,
storeContexts: ['viewports'],
options: {},
},
previousImage: {
commandFn: actions.previousImage,
storeContexts: ['viewports'],
options: {},
},
// TOOLS
setToolActive: {
commandFn: actions.setToolActive,
storeContexts: [],
options: {},
},
setZoomTool: {
commandFn: actions.setToolActive,
storeContexts: [],
options: { toolName: 'Zoom' },
},
setCornerstoneLayout: {
commandFn: actions.setCornerstoneLayout,
storeContexts: [],
options: {},
context: 'VIEWER',
},
setWindowLevel: {
commandFn: actions.setWindowLevel,
storeContexts: ['viewports'],
options: {},
},
};
return {
actions,
definitions,
defaultContext: 'ACTIVE_VIEWPORT::CORNERSTONE',
};
};
export default commandsModule;