* fix: 🐛 Local file: failing when retrieving segmentation data Fix segmentation data retrieval issues for local file. Changed from fecthing to use cornerstone loadAndCache method BREAKING CHANGE: DICOM Seg Closes: part of #838 * Switch SEG retrieval to WADO-RS * Forgot a debugger * refactor: 💡 Code refactor. Minor changes into methods * fix: 🐛 Load local files: PDF Items: 1. FileLoaderService: used for serveral operations on local files(load it, get list of studies, group them, accepting dicom and pdf) 2. DicomLoaderService: used for loading dicom based on dataset and studies. Depending on type of dicom loader might change. WIP 3. Refactor PDF and handleSegmentationStorage to use DicomLoaderService * fix: 🐛 Code review * fix: 🐛 Code review. Changed:Folder organization and dicom file Move fileLoaderService and others to a specific folder. When loading dicom file change to only retrieve the file(not use cornerstone to cache or anything else). * fix: 🐛 Code review. Move dicomLoaderService to core Moved dicomLoaderService to ohif/core and localFileLoaders to a specific folder. * fix: 🐛 Code review Simplified method to get study for dicom file. Added error handling on file loading. DicomLoaderService to be exposed on ohif/core/utils instead. * fix: 🐛 Reduce local load to one method only Reduced local file load to one method only * fix: 🐛 HTML to use dicomLoaderService. Prefer wadors than (uri) * fix: 🐛 Code implementation for multiframe files * fix: 🐛 Code review. Default local loader to dicom Closes: 838 * fix: 🐛 Code review. Use relative path to require DICOMWeb Closes: 838 * fix: 🐛 Code review. Fix unit test. Added DicomLoaderService mod Closes: 838 * fix: 🐛 Code review. Add 'Seg' on left thumb When getting/creating dataset get modality for file/image read Closes: 838
89 lines
1.9 KiB
JavaScript
89 lines
1.9 KiB
JavaScript
import React, { Component } from 'react';
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import dicomParser from 'dicom-parser';
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import TypedArrayProp from './TypedArrayProp';
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// TODO: Should probably use dcmjs for this
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const SOP_CLASS_UIDS = {
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ENCAPSULATED_PDF: '1.2.840.10008.5.1.4.1.1.104.1',
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};
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class DicomPDFViewport extends Component {
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state = {
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fileURL: null,
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error: null,
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};
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static propTypes = {
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byteArray: TypedArrayProp.uint8,
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};
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renderPDF = (dataSet, byteArray) => {
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let pdfByteArray = byteArray;
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if (dataSet) {
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const sopClassUid = dataSet.string('x00080016');
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if (sopClassUid !== SOP_CLASS_UIDS.ENCAPSULATED_PDF) {
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throw new Error('This is not a DICOM-encapsulated PDF');
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}
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const fileTag = dataSet.elements.x00420011;
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const offset = fileTag.dataOffset;
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const remainder = offset + fileTag.length;
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pdfByteArray = dataSet.byteArray.slice(offset, remainder);
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}
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const PDF = new Blob([pdfByteArray], { type: 'application/pdf' });
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const fileURL = URL.createObjectURL(PDF);
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this.setState({
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fileURL,
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});
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};
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parseByteArray = byteArray => {
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const options = {
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untilTag: '',
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};
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let dataSet;
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try {
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dataSet = dicomParser.parseDicom(byteArray, options);
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} catch (error) {
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this.setState({
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error,
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});
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}
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return dataSet;
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};
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componentDidMount() {
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const dataSet = this.parseByteArray(this.props.byteArray);
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this.renderPDF(dataSet, this.props.byteArray);
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}
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render() {
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return (
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<div
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className={'DicomPDFViewport'}
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style={{ width: '100%', height: '100%' }}
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>
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{this.state.fileURL && (
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<object
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data={this.state.fileURL}
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type="application/pdf"
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width="100%"
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height="100%"
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/>
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)}
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{this.state.error && <h2>{JSON.stringify(this.state.error)}</h2>}
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</div>
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);
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}
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}
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export default DicomPDFViewport;
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