* Filter segs and fetch correct metadata. * Initiate seg loading logic on series load into viewport. Need to write. * Automatic consumption of SEG functional. * Pull in master. * Fix issues after pulling in master. * Clean up old segmentation handlers. * WIP * WIP * Poppulate viewport with metadata. * Show hide/segmentation in react-vtkjs-viewport. * feat: 🎸 View segmentations in vtkjs viewport * Filter segs and fetch correct metadata. * Initiate seg loading logic on series load into viewport. Need to write. * Automatic consumption of SEG functional. * Pull in master. * Fix issues after pulling in master. * Clean up old segmentation handlers. * WIP * WIP * Poppulate viewport with metadata. * Show hide/segmentation in react-vtkjs-viewport. * feat: 🎸 View segmentations in vtkjs viewport * Rebase on master. * format format format * add basic extension parts * Updated yarn lock * Fetch derived/referenced displaysets in sidepanel * Add buttons, expose seriesDescription, write notes for Danny. * Add growcut tool extention. -> Move to a seperate repo. * Change some text fields. * expose dialog provider * hide draggable area * No pointer events for now; need to revisit * Don't filter seg from the outset for now * fiddling about * fix path to series data * fix logic to determine next available labelmapindex * Ability to swtich between labelmaps * Return a promise so we can make sure our labelmap is loaded before pulling metadata * Better UI to toggle labelmaps * Fix accidental untoggle of active labelmap for ui * Remove brush tool from cornerstone extension * Add cstools in preInit for seg extension * Add buttons for seg magic * Hide the measurements panel for now * Slightly better seg/scissor icons * Add eraser * ability to switch segments * seg color / switcher * Fix vtk labelmap cache. * sidepanel should scroll if there's overflow * Use a fancier range slider * Slightly prettier buttons * Push in progress * A bit more reactive; handle no-meta * Update to vtk.js 11.14.0 and react-vtkjs-viewport 0.6.0 * chore: kickstart preview * Fix conflict issues * Refactor panel * Isolate increment functions * Wip segment table * Hide selector and add scroll to segmentation * Increase width of segment description * Hide not used items * Add new select for segmentations * Align ui * Fix default segmentation * Fix broken import test * Get measurements panel back and add spacing to grouped buttons * Hide brush and selector and refresh when switching segmentations * Add pointer events back and fix broken tests for measurement table * Update segment list when switching humbnails * CR Update: Minor UI adjustments * CR Update: Set active segment * Move components to components folder * Add new settings ui * Integrate configuration * Improve styles * Float numbers * Improve css * Refresh settings menu if side panel changed * Fix settings rendering logic and remove comments * Extract components * Remove not used tools * Remove non used extension * Use style variables and remove comments * Remove non used dep from lock * Remove tools * Remove segmentation from toolbar * Add todo and brushradius from config * Fix packagejson growcut import * Remove webpack config already defined in parent * Update package json description * Change component name to british english to us * Improve prop types * Rename cornerstone label map event * Scope css * Extract and add doc to helper * Update jsdocs for getDerivedDatasets * Add proptypes and cr updates * Update tablistitem proptypes * config is readonly, rollback destructuring * Remove event for side panel * Add jsdocs for util * Extract getimageid to studymetada * Use ohif log instead of console * Remove specific style from side panel * Fix default props for brush radius * Descructure configuration props from settings component to avoid invalid props * Update proptypes to be required (settings) * Update readme * Remove commandsmodule * Get configuration module inside the component * Set selected segment * Rename extension and use modality to filter * Fix for failing tests (#1423) * hello world * Finish rebase for Igor. * Re-fix cornerstoneTools version that got messed up in merge. * Fix reactivity of isDisabled, write implementation for the SEG panel. * Nuke yarn.lock to stack CST to 4.12.0 * Remove debugger statements. * fix: bump cornerstone-tools version to address toFixed issue * test: force tests for MISTER^MR to navigate to study directly * test: remove eraser tool test * test: count is off by one * test: don't save SR state for the time being * test: disable more tests Co-authored-by: James A. Petts <jamesapetts@gmail.com> Co-authored-by: dannyrb <danny.ri.brown@gmail.com> Co-authored-by: igoroctaviano] <igoroctaviano@users.noreply.github.com> Co-authored-by: Mirna Silva <mirna.silva@radicalimaging.com>
108 lines
3.3 KiB
JavaScript
108 lines
3.3 KiB
JavaScript
import studyMetadataManager from './studyMetadataManager';
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/**
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* Study schema
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*
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* @typedef {Object} Study
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* @property {Array} seriesList -
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* @property {Object} seriesMap -
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* @property {Object} seriesLoader -
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* @property {string} wadoUriRoot -
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* @property {string} wadoRoot -
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* @property {string} qidoRoot -
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* @property {string} patientName -
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* @property {string} patientId -
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* @property {number} patientAge -
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* @property {number} patientSize -
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* @property {number} patientWeight -
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* @property {string} accessionNumber -
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* @property {string} studyDate -
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* @property {string} studyTime -
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* @property {string} modalities -
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* @property {string} studyDescription -
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* @property {string} imageCount -
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* @property {string} studyInstanceUid -
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* @property {string} institutionName -
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* @property {Array} displaySets -
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*/
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/**
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* Factory function to load and cache derived display sets.
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*
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* @param {object} referencedDisplaySet Display set
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* @param {string} referencedDisplaySet.displaySetInstanceUid Display set instance uid
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* @param {string} referencedDisplaySet.seriesDate
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* @param {string} referencedDisplaySet.seriesTime
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* @param {string} referencedDisplaySet.seriesInstanceUid
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* @param {string} referencedDisplaySet.seriesNumber
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* @param {string} referencedDisplaySet.seriesDescription
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* @param {number} referencedDisplaySet.numImageFrames
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* @param {string} referencedDisplaySet.frameRate
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* @param {string} referencedDisplaySet.modality
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* @param {boolean} referencedDisplaySet.isMultiFrame
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* @param {number} referencedDisplaySet.instanceNumber
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* @param {boolean} referencedDisplaySet.isReconstructable
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* @param {string} referencedDisplaySet.studyInstanceUid
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* @param {Array} referencedDisplaySet.sopClassUids
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* @param {Study[]} studies Collection of studies
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* @returns void
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*/
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const loadAndCacheDerivedDisplaySets = (referencedDisplaySet, studies) => {
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const { StudyInstanceUID, SeriesInstanceUID } = referencedDisplaySet;
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const studyMetadata = studyMetadataManager.get(StudyInstanceUID);
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if (!studyMetadata) {
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return;
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}
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const derivedDisplaySets = studyMetadata.getDerivedDatasets({
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referencedSeriesInstanceUID: SeriesInstanceUID,
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});
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if (!derivedDisplaySets.length) {
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return;
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}
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// Filter by type
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const displaySetsPerModality = {};
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derivedDisplaySets.forEach(displaySet => {
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const Modality = displaySet.Modality;
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if (displaySetsPerModality[Modality] === undefined) {
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displaySetsPerModality[Modality] = [];
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}
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displaySetsPerModality[Modality].push(displaySet);
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});
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// For each type, see if any are loaded, if not load the most recent.
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Object.keys(displaySetsPerModality).forEach(key => {
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const displaySets = displaySetsPerModality[key];
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const isLoaded = displaySets.some(displaySet => displaySet.isLoaded);
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if (isLoaded) {
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return;
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}
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// find most recent and load it.
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let recentDateTime = 0;
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let recentDisplaySet;
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displaySets.forEach(displaySet => {
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const dateTime = Number(
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`${displaySet.SeriesDate}${displaySet.SeriesTime}`
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);
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if (dateTime > recentDateTime) {
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recentDateTime = dateTime;
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recentDisplaySet = displaySet;
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}
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});
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recentDisplaySet.load(referencedDisplaySet, studies);
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});
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};
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export default loadAndCacheDerivedDisplaySets;
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