ohif-viewer/platform/core/src/utils/loadAndCacheDerivedDisplaySets.js
Igor Octaviano e8842cf8ae
feat: Segmentations Settings UI - Phase 1 #1391 (#1392)
* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Rebase on master.

* format format format

* add basic extension parts

* Updated yarn lock

* Fetch derived/referenced displaysets in sidepanel

* Add buttons, expose seriesDescription, write notes for Danny.

* Add growcut tool extention. -> Move to a seperate repo.

* Change some text fields.

* expose dialog provider

* hide draggable area

* No pointer events for now; need to revisit

* Don't filter seg from the outset for now

* fiddling about

* fix path to series data

* fix logic to determine next available labelmapindex

* Ability to swtich between labelmaps

* Return a promise so we can make sure our labelmap is loaded before pulling metadata

* Better UI to toggle labelmaps

* Fix accidental untoggle of active labelmap for ui

* Remove brush tool from cornerstone extension

* Add cstools in preInit for seg extension

* Add buttons for seg magic

* Hide the measurements panel for now

* Slightly better seg/scissor icons

* Add eraser

* ability to switch segments

* seg color / switcher

* Fix vtk labelmap cache.

* sidepanel should scroll if there's overflow

* Use a fancier range slider

* Slightly prettier buttons

* Push in progress

* A bit more reactive; handle no-meta

* Update to vtk.js 11.14.0 and react-vtkjs-viewport 0.6.0

* chore: kickstart preview

* Fix conflict issues

* Refactor panel

* Isolate increment functions

* Wip segment table

* Hide selector and add scroll to segmentation

* Increase width of segment description

* Hide not used items

* Add new select for segmentations

* Align ui

* Fix default segmentation

* Fix broken import test

* Get measurements panel back and add spacing to grouped buttons

* Hide brush and selector and refresh when switching segmentations

* Add pointer events back and fix broken tests for measurement table

* Update segment list when switching humbnails

* CR Update: Minor UI adjustments

* CR Update: Set active segment

* Move components to components folder

* Add new settings ui

* Integrate configuration

* Improve styles

* Float numbers

* Improve css

* Refresh settings menu if side panel changed

* Fix settings rendering logic and remove comments

* Extract components

* Remove not used tools

* Remove non used extension

* Use style variables and remove comments

* Remove non used dep from lock

* Remove tools

* Remove segmentation from toolbar

* Add todo and brushradius from config

* Fix packagejson growcut import

* Remove webpack config already defined in parent

* Update package json description

* Change component name to british english to us

* Improve prop types

* Rename cornerstone label map event

* Scope css

* Extract and add doc to helper

* Update jsdocs for getDerivedDatasets

* Add proptypes and cr updates

* Update tablistitem proptypes

* config is readonly, rollback destructuring

* Remove event for side panel

* Add jsdocs for util

* Extract getimageid to studymetada

* Use ohif log instead of console

* Remove specific style from side panel

* Fix default props for brush radius

* Descructure configuration props from settings component to avoid invalid props

* Update proptypes to be required (settings)

* Update readme

* Remove commandsmodule

* Get configuration module inside the component

* Set selected segment

* Rename extension and use modality to filter

* Fix for failing tests (#1423)

* hello world

* Finish rebase for Igor.

* Re-fix cornerstoneTools version that got messed up in merge.

* Fix reactivity of isDisabled, write implementation for the SEG panel.

* Nuke yarn.lock to stack CST to 4.12.0

* Remove debugger statements.

* fix: bump cornerstone-tools version to address toFixed issue

* test: force tests for MISTER^MR to navigate to study directly

* test: remove eraser tool test

* test: count is off by one

* test: don't save SR state for the time being

* test: disable more tests

Co-authored-by: James A. Petts <jamesapetts@gmail.com>
Co-authored-by: dannyrb <danny.ri.brown@gmail.com>
Co-authored-by: igoroctaviano] <igoroctaviano@users.noreply.github.com>
Co-authored-by: Mirna Silva <mirna.silva@radicalimaging.com>
2020-03-13 15:45:26 -04:00

108 lines
3.3 KiB
JavaScript

import studyMetadataManager from './studyMetadataManager';
/**
* Study schema
*
* @typedef {Object} Study
* @property {Array} seriesList -
* @property {Object} seriesMap -
* @property {Object} seriesLoader -
* @property {string} wadoUriRoot -
* @property {string} wadoRoot -
* @property {string} qidoRoot -
* @property {string} patientName -
* @property {string} patientId -
* @property {number} patientAge -
* @property {number} patientSize -
* @property {number} patientWeight -
* @property {string} accessionNumber -
* @property {string} studyDate -
* @property {string} studyTime -
* @property {string} modalities -
* @property {string} studyDescription -
* @property {string} imageCount -
* @property {string} studyInstanceUid -
* @property {string} institutionName -
* @property {Array} displaySets -
*/
/**
* Factory function to load and cache derived display sets.
*
* @param {object} referencedDisplaySet Display set
* @param {string} referencedDisplaySet.displaySetInstanceUid Display set instance uid
* @param {string} referencedDisplaySet.seriesDate
* @param {string} referencedDisplaySet.seriesTime
* @param {string} referencedDisplaySet.seriesInstanceUid
* @param {string} referencedDisplaySet.seriesNumber
* @param {string} referencedDisplaySet.seriesDescription
* @param {number} referencedDisplaySet.numImageFrames
* @param {string} referencedDisplaySet.frameRate
* @param {string} referencedDisplaySet.modality
* @param {boolean} referencedDisplaySet.isMultiFrame
* @param {number} referencedDisplaySet.instanceNumber
* @param {boolean} referencedDisplaySet.isReconstructable
* @param {string} referencedDisplaySet.studyInstanceUid
* @param {Array} referencedDisplaySet.sopClassUids
* @param {Study[]} studies Collection of studies
* @returns void
*/
const loadAndCacheDerivedDisplaySets = (referencedDisplaySet, studies) => {
const { StudyInstanceUID, SeriesInstanceUID } = referencedDisplaySet;
const studyMetadata = studyMetadataManager.get(StudyInstanceUID);
if (!studyMetadata) {
return;
}
const derivedDisplaySets = studyMetadata.getDerivedDatasets({
referencedSeriesInstanceUID: SeriesInstanceUID,
});
if (!derivedDisplaySets.length) {
return;
}
// Filter by type
const displaySetsPerModality = {};
derivedDisplaySets.forEach(displaySet => {
const Modality = displaySet.Modality;
if (displaySetsPerModality[Modality] === undefined) {
displaySetsPerModality[Modality] = [];
}
displaySetsPerModality[Modality].push(displaySet);
});
// For each type, see if any are loaded, if not load the most recent.
Object.keys(displaySetsPerModality).forEach(key => {
const displaySets = displaySetsPerModality[key];
const isLoaded = displaySets.some(displaySet => displaySet.isLoaded);
if (isLoaded) {
return;
}
// find most recent and load it.
let recentDateTime = 0;
let recentDisplaySet;
displaySets.forEach(displaySet => {
const dateTime = Number(
`${displaySet.SeriesDate}${displaySet.SeriesTime}`
);
if (dateTime > recentDateTime) {
recentDateTime = dateTime;
recentDisplaySet = displaySet;
}
});
recentDisplaySet.load(referencedDisplaySet, studies);
});
};
export default loadAndCacheDerivedDisplaySets;