ohif-viewer/platform/viewer/cypress/integration/measurement-tracking/OHIFStudyViewer.spec.js
Erik Ziegler bd1c38c00c
feat: cornerstone3D stack and volume viewports (#2787)
* feat: cs3d working stack viewport and tools (#19)

* Squashed everything

* fix weird react issue

* fix eslint / prettier stuff

* thumbnails work now with cpu rendering

* feat: use new loadImageToCanvas in cs3d

* make jump to measurement work

* fix active thumbnail

* fix measurement delete

* fix window level presets

* remove segmentation and sync groups for now

* fix the dicom pdf and dicom video

* fix cornerstone window assignment for cypress

* apply review comments

Co-authored-by: Erik <erik.sweed@gmail.com>

* feat: cs3d tools and toolGroups (#20)

* add more tools to work with cs3d mode

* fix hotkeys

* add stack manager usage for stach viewports

* add image scrollbar

* wip viewport overlay

* fix toAnnotation schema for tools

* fix the unnecessary size change that triggered resize

* hanging protocol improvement to allow unmatched errors

* study description matching for hanging protocol

* fix the displaysetOptions to work

* fix handle the active tool when a new viewport is added

* fix separate toolGroups for mode

* apply review comments

* apply review comments

* yarn lock

* feat: overlay component (#21)

* fix default displayset options

* add viewport overlay

* apply review comments

* feat: loading and orientation indicators (#22)

* add loading indicator

* add orientation marker initial work

* apply review comments

* fix: orientation markers (#23)

* finished the orientation markers

* fix various broken cypress tests

* apply review comments

* update yarn lock

* feat: re-working measurement tracking mode with cornerstone3d (#2805)

* feat: cs3d working stack viewport and tools (#19)

* Squashed everything

* fix weird react issue

* fix eslint / prettier stuff

* thumbnails work now with cpu rendering

* feat: use new loadImageToCanvas in cs3d

* make jump to measurement work

* fix active thumbnail

* fix measurement delete

* fix window level presets

* remove segmentation and sync groups for now

* fix the dicom pdf and dicom video

* fix cornerstone window assignment for cypress

* apply review comments

Co-authored-by: Erik <erik.sweed@gmail.com>

* feat: Add Measurement tracking mode with cs3D (#2789)

* feat: first render for cornerstone3d tracked viewport

* make tool active work

* wip for SR extension

* renamed dicom sr to cornerstone dicom sr

* remove cornerstone from dicom pdf and video

* move dicom sr logic to sr extension

* feat: Add hydration for the length tool

* fix SR display tool for length using cs3d

* fix default config

* fix: various bugs with sr viewport and tracking

* fix promptying to continue tracking for when SR is created

* feat: add keep trackign of unique identifiers

* fix hydration for same imageIds

* feat: Add SR toolGroup creation on modeEnter

* feat: remove the need for separate mapper for SR hydration

* add SR display for ellipse

* handle hydration of elliptical ROI tool

* remove cornerstone extension

* add arrow mapping

* feat: Add ArrowAnnotate SR display and hydration

* apply review comments

* apply review comments

* move viewport labels to the viewportData

* apply review comments

* fix: integration cypress tests with cornerstone3D and add CINE tool (#2795)

* fix: integration cypress tests with cornerstone3D

* revert to addOrUpdate as it makes more sense

* fix local drag and drop

* fix tests

* move dicomLoaderService to cornerstone extension

* fix various import bugs

* fix bug for local PT series

* fix various unit tests

* bump cs3d versions

* add angle and magnify tool

* bump dependencies to avoid broken peerDeps

* feat: add initial work for capture using cs3d

* feat: show annotations on the image capture

* feat: add svg layer export

* feat: Add CINE Tool

* feat: remove unnecessary viewport rendering for cine state changes

Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>

* docs: modify and improve documentation (#2800)

* cleanup docs versionings

* feat: Add all version explanations

* version docs for 3.0

* wip for changing docs

* wip for updated docs

* add utility module documentation

* fix demo with nohoisting of history

* add slides and video to resources

* apply review comments

* fix: drag and drop SR into SR viewport (#2803)

* update yarn lock

Co-authored-by: Erik <erik.sweed@gmail.com>

* update pathnames to match v3-stable

* update the e2e pathname

* fix: various bugs with regard to tracking workflow (#2811)

* fix: various issues with measurement panel

* fix: update default tool style for annotations

* fix: annotatoin label getting removed

* feat: Add backward compatibility for SR hydration with legacy cornerstone

* fix: cursors and ellipse ROI max style

* fix: ArrowAnnotate SRDisplay

* apply review comments

* bump package versions

* fix: bugin rehydration of SR

* fix: e2e tests

* fix active viewport thickness and arrowTool ui

* add readme for measurement tracking

* use uploaded image for readme

* add back images

* try to fix e2e test

* fix: window level presets hotkeys

* Update README.md

* update yarn lock

* feat: volume api and TMTV mode (#2817)

* feat: volumeAPI and TMTV mode

* feat: use cs3d cache service to obtain viewportData

* wip for volume api

* wip: fusion viewport

* feat: add blend mode option

* wip for image scrollbar

* fix drag and drop thumbnail

* wip for image scrollbar for voluems

* fix: element mismatch bug for scroll

* feat: Add image scrollbar to volumes

* feat: add syncGroups to volume api

* feat: add tmtv mode initial setup

* feat: add initial image options for the stack viewports

* feat: Add custom load strategy for volume viewports via HP

* apply review comments

fix: Jump presets cs3d (#2812)

* feat: Add JumpPreset to OHIF for Cornerstone3D

* fix: accessing viewport service from servicesManager

feat: volume API and TMTV mode (#2814)

* fix: do not display overlays on mip viewports

* feat: add optional disableCommands for toggle buttons

* fix: toggleCrossharis

* feat: config the crosshairs

* feat: add PetSUV Panel for changing metadata

* feat: initial work for the rectangleROIThreshold panel

* wip: measurement service

* roi threshold working

* feat: Add displayText to segmentations

* feat: add remove segmentation

* feat: add csv export

* feat: add RT export for annotations in tmtv mode

* fix: fusion to use pt in tmtv mode and measuremet mappings

* fix: various bugs

* apply review comments

* apply review comments

* feat: add fusion color maps

* add readme to tmtv mode

* Update README.md

* fix: try to fix build

* fix unit tests

* Update README.md

* feat: add about to the panel

* fix: changing strategy in roi panel

* apply review comments

* update package versions

* wip for stackPrefetch

* fix: cornerstone3d hydration and renaming (#2818)

* update readme

* renamed cornerstone extension

* wip for renaming cornerstone3D variables

* wip for renaming cornerstone3D variables

* wip for fixing bugs for SR viewport

* fix: jumpToMeasurement and initial label after hydration

* fix: fileName capitalization

* feat: use the new prefetch stack in the cs3d (#2820)

* feat: use the new prefetch stack in the cs3d

* use viewport scroll api for stack viewport

* fix cine stop when scrollbar changes

* feat: use new prefetch events

* fix loading state to not show repeatedly

* fix: various bugs for tmtv mode thresholding and new icons (#2823)

* feat: make tmtv mode available in worklist

* feat: add new icons for tmtv mode

* feat: add fusion color icon

* fix: parallel scale calculation

* fix: bump Cornerstone to get large image support working

* fix: Fix issues with CPU viewport flipping, including config files

* fix: bump cornerstone to fix magnify tool

* fix: Bump Cornerstone version to fix resetCamera issue in StackViewport

* ci: Add _headers file to enable CORS headers for Netlify Drag/Drop deploys

* fix: WADO-URI was not working. PET Metadata was coming from the wrong place. Fixed some minor React errors

* feat(OHIF):Allow modes and extensions to be added after commpile time. (#2838)

Also works with the compile time add that the existing cli uses, so that both build types work.
Eric and I agreed this doesn't change existing functionality, but is almost entirely build issues/fixes.

* bump: dependency versions to fix hydration bugs (#2848)

* bump: dcmjs version to fix hydration bugs

* try to fix tests

* bump dependency versions

Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2022-07-27 12:39:04 -04:00

340 lines
10 KiB
JavaScript

describe('OHIF Study Viewer Page', function() {
before(() => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(3);
});
beforeEach(function() {
cy.initCommonElementsAliases();
cy.initCornerstoneToolsAliases();
cy.resetViewport().wait(50);
});
it('checks if series thumbnails are being displayed', function() {
cy.get('[data-cy="study-browser-thumbnail"]')
.its('length')
.should('be.gt', 1);
});
it('drags and drop a series thumbnail into viewport', function() {
cy.get('[data-cy="study-browser-thumbnail"]:nth-child(2)') //element to be dragged
.drag('.cornerstone-canvas'); //dropzone element
//const expectedText =
// 'Ser: 2Img: 1 1/13512 x 512Loc: -17.60 mm Thick: 3.00 mm';
//cy.get('@viewportInfoBottomLeft').should('contain.text', expectedText);
});
it('checks if Series left panel can be hidden/displayed', function() {
cy.get('@seriesPanel').should('exist');
cy.get('@seriesPanel').should('be.visible');
cy.get('@seriesBtn').click();
cy.get('@seriesPanel').should('not.exist');
cy.get('@seriesBtn').click();
cy.get('@seriesPanel').should('exist');
cy.get('@seriesPanel').should('be.visible');
});
it('checks if Measurements right panel can be hidden/displayed', function() {
cy.get('@measurementsPanel').should('exist');
cy.get('@measurementsPanel').should('be.visible');
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.exist');
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('exist');
cy.get('@measurementsPanel').should('be.visible');
});
/*it('checks if measurement item can be Relabeled under Measurements panel', function() {
// Add length measurement
cy.addLengthMeasurement();
cy.get('[data-cy="measurement-tracking-prompt-begin-tracking"]').should('exist')
cy.get('[data-cy="measurement-tracking-prompt-begin-tracking"]').should('be.visible')
cy.get('[data-cy="prompt-begin-tracking-yes"]').click();
cy.get('.measurementItem').click();
// Click "Relabel"
cy.get('.btnAction', { timeout: 10000 })
.first()
.contains('Relabel')
.click().should('be.visible');
// Search for "Bone"
cy.get('.searchInput').type('Bone');
// Select "Bone" Result
cy.get('.treeInputs > .wrapperLabel')
.contains('Bone')
.click();
// Confirm Selection
cy.get('.checkIconWrapper').click();
// Verify if 'Bone' label was added
cy.get('.measurementLocation').should('contain.text', 'Bone');
// Remove the measurement we just added
cy.get('.btnAction')
.last()
.contains('Delete')
.click()
// Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.exist');
});*/
/*
TODO: Not sure why this is failing
it('checks if Description can be added to measurement item under Measurements panel', () => {
cy.addLengthMeasurement(); //Adding measurement in the viewport
cy.get('@measurementsBtn').click();
cy.get('.measurementItem').click();
// Click "Description"
cy.get('.btnAction')
.contains('Description')
.click();
// Enter description text
const descriptionText = 'Adding text for description test';
cy.get('#description').type(descriptionText);
// Confirm
cy.get('.btn-confirm').click();
//Verify if descriptionText was added
cy.get('.measurementLocation').should('contain.text', descriptionText);
// Remove the measurement we just added
cy.get('.btnAction')
.last()
.contains('Delete')
.click()
// Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.be.enabled');
});
*/
/*it('checks if measurement item can be deleted through the context menu on the viewport', function() {
cy.addLengthMeasurement([100, 100], [200, 100]); //Adding measurement in the viewport
//Right click on measurement annotation
const [x1, y1] = [150, 100];
cy.get('@viewport')
.trigger('mousedown', x1, y1, {
which: 3,
})
.trigger('mouseup', x1, y1, {
which: 3,
})
.wait(300)
.then(() => {
//Contextmenu is visible
cy.get('.ToolContextMenu').should('be.visible');
});
//Click "Delete measurement"
cy.get('.form-action')
.contains('Delete measurement')
.click();
//Open measurements menu
cy.get('@measurementsBtn').click();
//Verify measurements was removed from panel
cy.get('.measurementItem')
.should('not.exist')
.log('Annotation successfully removed');
//Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.exist');
});*/
/*it('adds relabel and description to measurement item through the context menu on the viewport', function() {
cy.addLengthMeasurement([100, 100], [200, 100]); //Adding measurement in the viewport
// Relabel
// Right click on measurement annotation
const [x1, y1] = [150, 100];
cy.get('@viewport')
.trigger('mousedown', x1, y1, {
which: 3,
})
.trigger('mouseup', x1, y1, {
which: 3,
});
// Contextmenu is visible
cy.get('.ToolContextMenu').should('be.visible');
// Click "Relabel"
cy.get('.form-action')
.contains('Relabel')
.click();
// Search for "Brain"
cy.get('.searchInput').type('Brain');
// Select "Brain" Result
cy.get('.treeInputs > .wrapperLabel')
.contains('Brain')
.click();
// Confirm Selection
cy.get('.checkIconWrapper').click();
// Description
// Right click on measurement annotation
cy.get('@viewport')
.trigger('mousedown', x1, y1, {
which: 3,
})
.trigger('mouseup', x1, y1, {
which: 3,
});
// Contextmenu is visible
cy.get('.ToolContextMenu').should('be.visible');
// Click "Description"
cy.get('.form-action')
.contains('Add Description')
.click();
// Enter description text
const descriptionText = 'Adding text for description test';
cy.get('#description').type(descriptionText);
// Confirm
cy.get('.btn-confirm').click();
//Open measurements menu
cy.get('@measurementsBtn').click();
// Verify if label was added
cy.get('.measurementLocation')
.should('contain.text', 'Brain')
.log('Relabel added with success');
//Verify if descriptionText was added
cy.get('.measurementLocation')
.should('contain.text', descriptionText)
.log('Description added with success');
// Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.exist');
});*/
it('scrolls series stack using scrollbar', function() {
// Workaround implemented based on Cypress issue:
// https://github.com/cypress-io/cypress/issues/1570#issuecomment-450966053
const nativeInputValueSetter = Object.getOwnPropertyDescriptor(
window.HTMLInputElement.prototype,
'value'
).set;
cy.get('input.imageSlider[type=range]').then($range => {
// get the DOM node
const range = $range[0];
// set the value manually
nativeInputValueSetter.call(range, 13);
// now dispatch the event
range.dispatchEvent(new Event('change', { value: 13, bubbles: true }));
});
/*const expectedText =
'Ser: 2Img: 13 13/13512 x 512Loc: 18.40 mm Thick: 3.00 mm'; //'Img: 13 13/13';
cy.get('@viewportInfoBottomLeft').should('contains.text', expectedText);*/
});
it('performs double-click to load thumbnail in active viewport', () => {
cy.get('[data-cy="study-browser-thumbnail"]:nth-child(2)').dblclick();
//const expectedText = 'Ser: 3';
//cy.get('@viewportInfoBottomLeft').should('contains.text', expectedText);
});
// it('performs right click to zoom', function() {
// // This is not used to activate the tool, it is used to ensure the
// // top left viewport info shows the zoom values (it only shows up
// // when the zoom tool is active)
// cy.get('@zoomBtn')
// .click()
// .then($zoomBtn => {
// cy.wrap($zoomBtn).should('have.class', 'active');
// });
// //Right click on viewport
// cy.get('@viewport')
// .trigger('mousedown', 'top', { buttons: 2 })
// .trigger('mousemove', 'center', { buttons: 2 })
// .trigger('mouseup');
// const expectedText = 'Zoom:6.65x';
// cy.get('@viewportInfoTopLeft').should('contains.text', expectedText);
// });
/*it('performs middle click to pan', function() {
//Get image position from cornerstone and check if y axis was modified
let cornerstone;
let currentPan;
// TO DO: Replace the cornerstone pan check by Percy snapshot comparison
cy.window()
.its('cornerstone')
.then(c => {
cornerstone = c;
currentPan = () =>
cornerstone.getEnabledElements()[0].viewport.translation;
});
//pan image with middle click
cy.get('@viewport')
.trigger('mousedown', 'center', { buttons: 3 })
.trigger('mousemove', 'bottom', { buttons: 3 })
.trigger('mouseup', 'bottom')
.then(() => {
expect(currentPan().y > 0).to.eq(true);
});
});*/
/*it('opens About modal and verify the displayed information', function() {
cy.get('[data-cy="options-dropdown"]')
.first()
.click();
cy.get('[data-cy="about-modal"]')
.as('aboutOverlay')
.should('be.visible');
//check buttons and links
cy.get('[data-cy="about-modal"]')
.should('contains.text', 'Visit the forum')
.and('contains.text', 'Report an issue')
.and('contains.text', 'https://github.com/OHIF/Viewers/');
//check version number
cy.get('[data-cy="about-modal"]').then($modal => {
cy.get('[data-cy="header-version-info"]').should($headerVersionNumber => {
$headerVersionNumber = $headerVersionNumber.text().substring(1);
expect($modal).to.contain($headerVersionNumber);
});
});
//close modal
cy.get('[data-cy="close-button"]').click();
cy.get('@aboutOverlay').should('not.exist');
});*/
});