Files
ohif-viewer/platform/viewer/src/connectedComponents/ViewerRetrieveStudyData.js
T
Gustavo André Lelis ebe1af8d4f feat: 🎸 DICOM SR STOW on MeasurementAPI (#954)
* feat: 🎸 DICOM SR STOW on MeasurementAPI

Closes: #758

* feat: 🎸 Adding the dataExchance from DICOM SR

* feat: 🎸 Fix some issues and get the retrieve measurements working

* feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)

* feat: 🎸 Adding a button to start testing SATE functionality

* feat: 🎸Small fixes into the code

* feat: 🎸 MAke sure we get latest SR in the study, even on lazyLoad mode

* Revert "feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)"

This reverts commit 4b3a1efb5810487d2319826fd59c03d779882b5e.

* feat: 🎸 Make sure after sync we update the viewports and also that annotation tools are set to passive, so it can be drawn in the viewports

* feat: 🎸 Remove console logs and start using OHIF.log

* feat: 🎸 Refactor measurement table to use Snackbar service of messages and make sure we only show save button if server type is dicomWeb

* feat: 🎸 Refactor to remove mocked wadoRoot and use server

* Fix to expose error once we can't save the SR

* Update DCMJS into latest dev version

* Update dcmjs with latest fixes

* Fix PR callouts

* Logging error on MeasurementReport creation

* Preventing from breaking on non supported tools and also warning that some toolType is not sopported

* Small error message update

* Expose better the errors and when we have unsopported tools into the measurements

* Renaming variable

* Expose dcmjs tool support check

* Change the way we warn the unsupportedTools

* Adding style to the button

* Small change on button style

* Fix git conflicts

* Fix after merge with latest master

* Fix after merge with master, btn was not clickable

* Fixing callouts

* Adding util functions into files and refactor with JSDocs

* Refactoring code, adding some basic JSDocs

* Bump dcmjs with latest version and fixes

* JSDocs and small refactors

* yarn lock file after dcmjs update

* Remove unused parameters

* Registering a plain copy of server into measurementAPI

* Small refactor

* Start changing from toolType to toolName

* Rename a function to get instanceMetadata

* Adding error if server is not DICOMWeb on retrieve

* Move snackbar outside of UI component and use UINotificationService

* Refactor and JSDocs

* Small fixes on JSDocs (style)

* Remove unused import

* Improve JSDocs on MeasurementApi

* Remove refactor leftover

* Improve JSDocs and propTypes

* JSDocs and small refactors
2019-12-11 11:14:01 -05:00

353 lines
10 KiB
JavaScript

import React, { useState, useEffect, useContext } from 'react';
import { metadata, studies, utils, log } from '@ohif/core';
import ConnectedViewer from './ConnectedViewer.js';
import PropTypes from 'prop-types';
import { extensionManager } from './../App.js';
import { useSnackbarContext } from '@ohif/ui';
const { OHIFStudyMetadata, OHIFSeriesMetadata } = metadata;
const { retrieveStudiesMetadata, deleteStudyMetadataPromise } = studies;
const { studyMetadataManager, updateMetaDataManager, makeCancelable } = utils;
// Contexts
import AppContext from '../context/AppContext';
const _promoteToFront = (list, value, searchMethod) => {
let response = [...list];
let promoted = false;
const index = response.findIndex(searchMethod.bind(undefined, value));
if (index > 0) {
const first = response.splice(index, 1);
response = [...first, ...response];
}
if (index >= 0) {
promoted = true;
}
return {
promoted,
data: response,
};
};
/**
* Promote series to front if find found equivalent on filters object
* @param {Object} study - study reference to promote series against
* @param {Object} [filters] - Object containing filters to be applied
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
* @param {boolean} isFilterStrategy - if filtering by query param strategy ON
*/
const _promoteList = (study, studyMetadata, filters, isFilterStrategy) => {
let promoted = false;
// Promote only if no filter should be applied
if (!isFilterStrategy) {
_sortStudyDisplaySet(study, studyMetadata);
promoted = _promoteStudyDisplaySet(study, studyMetadata, filters);
}
return promoted;
};
const _promoteStudyDisplaySet = (study, studyMetadata, filters) => {
let promoted = false;
const queryParamsLength = Object.keys(filters).length;
const shouldPromoteToFront = queryParamsLength > 0;
if (shouldPromoteToFront) {
const { seriesInstanceUID } = filters;
const _seriesLookup = (valueToCompare, displaySet) => {
return displaySet.seriesInstanceUid === valueToCompare;
};
const promotedResponse = _promoteToFront(
studyMetadata.getDisplaySets(),
seriesInstanceUID,
_seriesLookup
);
study.displaySets = promotedResponse.data;
promoted = promotedResponse.promoted;
}
return promoted;
};
/**
* Method to identify if query param (from url) was applied to given list
* @param {Object} study - study reference to promote series against
* @param {Object} [filters] - Object containing filters to be applied
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
* @param {boolean} isFilterStrategy - if filtering by query param strategy ON
*/
const _isQueryParamApplied = (study, filters = {}, isFilterStrategy) => {
const { seriesInstanceUID } = filters;
let applied = true;
// skip in case no filter or no toast manager
if (!seriesInstanceUID) {
return applied;
}
const { seriesList = [], displaySets = [] } = study;
const firstSeries = isFilterStrategy ? seriesList[0] : displaySets[0];
if (!firstSeries || firstSeries.seriesInstanceUid !== seriesInstanceUID) {
applied = false;
}
return applied;
};
const _showUserMessage = (queryParamApplied, message, dialog = {}) => {
if (queryParamApplied) {
return;
}
const { show: showUserMessage = () => { } } = dialog;
showUserMessage({
message,
});
};
const _addSeriesToStudy = (studyMetadata, series) => {
const sopClassHandlerModules =
extensionManager.modules['sopClassHandlerModule'];
const study = studyMetadata.getData();
const seriesMetadata = new OHIFSeriesMetadata(series, study);
studyMetadata.addSeries(seriesMetadata);
studyMetadata.createAndAddDisplaySetsForSeries(
sopClassHandlerModules,
seriesMetadata,
false
);
study.displaySets = studyMetadata.getDisplaySets();
_updateMetaDataManager(study, series.seriesInstanceUid);
};
const _updateMetaDataManager = (study, studyMetadata, series) => {
updateMetaDataManager(study, series);
const { studyInstanceUID } = study;
if (!studyMetadataManager.get(studyInstanceUID)) {
studyMetadataManager.add(studyMetadata);
}
};
const _updateStudyDisplaySets = (study, studyMetadata) => {
const sopClassHandlerModules =
extensionManager.modules['sopClassHandlerModule'];
if (!study.displaySets) {
study.displaySets = studyMetadata.createDisplaySets(sopClassHandlerModules);
}
studyMetadata.setDisplaySets(study.displaySets);
};
const _sortStudyDisplaySet = (study, studyMetadata) => {
studyMetadata.sortDisplaySets(study.displaySets);
};
const _loadRemainingSeries = studyMetadata => {
const { seriesLoader } = studyMetadata.getData();
if (!seriesLoader) {
return Promise.resolve();
}
const promisesLoaders = [];
while (seriesLoader.hasNext()) {
promisesLoaders.push(
seriesLoader
.next()
.then(
series => void _addSeriesToStudy(studyMetadata, series),
error => void log.error(error)
)
);
}
return Promise.all(promisesLoaders);
};
function ViewerRetrieveStudyData({
server,
studyInstanceUids,
seriesInstanceUids,
clearViewportSpecificData,
}) {
// hooks
const [error, setError] = useState(false);
const [studies, setStudies] = useState([]);
const [isStudyLoaded, setIsStudyLoaded] = useState(false);
const snackbarContext = useSnackbarContext();
const { appConfig = {} } = useContext(AppContext);
const { filterQueryParam: isFilterStrategy = false } = appConfig;
let cancelableSeriesPromises;
let cancelableStudiesPromises;
/**
* Callback method when study is totally loaded
* @param {object} study study loaded
* @param {object} studyMetadata studyMetadata for given study
* @param {Object} [filters] - Object containing filters to be applied
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
*/
const studyDidLoad = (study, studyMetadata, filters) => {
// User message
const promoted = _promoteList(
study,
studyMetadata,
filters,
isFilterStrategy
);
// Clear viewport to allow new promoted one to be displayed
if (promoted) {
clearViewportSpecificData(0);
}
const isQueryParamApplied = _isQueryParamApplied(
study,
filters,
isFilterStrategy
);
// Show message in case not promoted neither filtered but should to
_showUserMessage(
isQueryParamApplied,
'Query parameters were not applied. Using original series list for given study.',
snackbarContext
);
setStudies([...studies, study]);
setIsStudyLoaded(true);
};
/**
* Method to process studies. It will update displaySet, studyMetadata, load remaining series, ...
* @param {Array} studiesData Array of studies retrieved from server
* @param {Object} [filters] - Object containing filters to be applied
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
*/
const processStudies = (studiesData, filters) => {
if (Array.isArray(studiesData) && studiesData.length > 0) {
// Map studies to new format, update metadata manager?
const studies = studiesData.map(study => {
const studyMetadata = new OHIFStudyMetadata(
study,
study.studyInstanceUid
);
_updateStudyDisplaySets(study, studyMetadata);
_updateMetaDataManager(study, studyMetadata);
// Attempt to load remaning series if any
cancelableSeriesPromises[study.studyInstanceUid] = makeCancelable(
_loadRemainingSeries(studyMetadata)
)
.then(result => {
if (result && !result.isCanceled) {
studyDidLoad(study, studyMetadata, filters);
}
})
.catch(error => {
if (error && !error.isCanceled) {
setError(true);
}
});
return study;
});
setStudies(studies);
}
};
const loadStudies = async () => {
try {
const filters = {};
// Use the first, discard others
const seriesInstanceUID = seriesInstanceUids && seriesInstanceUids[0];
const retrieveParams = [server, studyInstanceUids];
if (seriesInstanceUID) {
filters.seriesInstanceUID = seriesInstanceUID;
// Query param filtering controlled by appConfig property
if (isFilterStrategy) {
retrieveParams.push(filters);
}
}
cancelableStudiesPromises[studyInstanceUids] = makeCancelable(
retrieveStudiesMetadata(...retrieveParams)
)
.then(result => {
if (result && !result.isCanceled) {
processStudies(result, filters);
}
})
.catch(error => {
if (error && !error.isCanceled) {
setError(true);
}
});
} catch (error) {
if (error) {
setError(true);
}
}
};
const purgeCancellablePromises = () => {
for (let studyInstanceUids in cancelableStudiesPromises) {
if ('cancel' in cancelableStudiesPromises[studyInstanceUids]) {
cancelableStudiesPromises[studyInstanceUids].cancel();
}
}
for (let studyInstanceUids in cancelableSeriesPromises) {
if ('cancel' in cancelableSeriesPromises[studyInstanceUids]) {
cancelableSeriesPromises[studyInstanceUids].cancel();
deleteStudyMetadataPromise(studyInstanceUids);
studyMetadataManager.remove(studyInstanceUids);
}
}
};
useEffect(() => {
studyMetadataManager.purge();
purgeCancellablePromises();
}, [studyInstanceUids]);
useEffect(() => {
cancelableSeriesPromises = {};
cancelableStudiesPromises = {};
loadStudies();
return () => {
purgeCancellablePromises();
};
}, []);
if (error) {
return <div>Error: {JSON.stringify(error)}</div>;
}
return (
<ConnectedViewer
studies={studies}
isStudyLoaded={isStudyLoaded}
studyInstanceUids={studyInstanceUids}
/>
);
}
ViewerRetrieveStudyData.propTypes = {
studyInstanceUids: PropTypes.array.isRequired,
seriesInstanceUids: PropTypes.array,
server: PropTypes.object,
clearViewportSpecificData: PropTypes.func.isRequired,
};
export default ViewerRetrieveStudyData;