ohif-viewer/extensions/cornerstone/src/init.tsx

343 lines
11 KiB
TypeScript

import OHIF, { Types, errorHandler } from '@ohif/core';
import React from 'react';
import * as cornerstone from '@cornerstonejs/core';
import * as cornerstoneTools from '@cornerstonejs/tools';
import {
init as cs3DInit,
eventTarget,
EVENTS,
metaData,
volumeLoader,
imageLoadPoolManager,
getEnabledElement,
Settings,
utilities as csUtilities,
Enums as csEnums,
} from '@cornerstonejs/core';
import {
cornerstoneStreamingImageVolumeLoader,
cornerstoneStreamingDynamicImageVolumeLoader,
} from '@cornerstonejs/streaming-image-volume-loader';
import initWADOImageLoader from './initWADOImageLoader';
import initCornerstoneTools from './initCornerstoneTools';
import { connectToolsToMeasurementService } from './initMeasurementService';
import initCineService from './initCineService';
import initStudyPrefetcherService from './initStudyPrefetcherService';
import interleaveCenterLoader from './utils/interleaveCenterLoader';
import nthLoader from './utils/nthLoader';
import interleaveTopToBottom from './utils/interleaveTopToBottom';
import initContextMenu from './initContextMenu';
import initDoubleClick from './initDoubleClick';
import initViewTiming from './utils/initViewTiming';
import { colormaps } from './utils/colormaps';
const { registerColormap } = csUtilities.colormap;
// TODO: Cypress tests are currently grabbing this from the window?
(window as any).cornerstone = cornerstone;
(window as any).cornerstoneTools = cornerstoneTools;
/**
*
*/
export default async function init({
servicesManager,
commandsManager,
extensionManager,
appConfig
}: Types.Extensions.ExtensionParams): Promise<void> {
// Note: this should run first before initializing the cornerstone
// DO NOT CHANGE THE ORDER
const value = appConfig.useSharedArrayBuffer;
let sharedArrayBufferDisabled = false;
if (value === 'AUTO') {
cornerstone.setUseSharedArrayBuffer(csEnums.SharedArrayBufferModes.AUTO);
} else if (value === 'FALSE' || value === false) {
cornerstone.setUseSharedArrayBuffer(csEnums.SharedArrayBufferModes.FALSE);
sharedArrayBufferDisabled = true;
} else {
cornerstone.setUseSharedArrayBuffer(csEnums.SharedArrayBufferModes.TRUE);
}
await cs3DInit({
rendering: {
preferSizeOverAccuracy: Boolean(appConfig.preferSizeOverAccuracy),
useNorm16Texture: Boolean(appConfig.useNorm16Texture),
},
peerImport: appConfig.peerImport,
});
// For debugging e2e tests that are failing on CI
cornerstone.setUseCPURendering(Boolean(appConfig.useCPURendering));
cornerstone.setConfiguration({
...cornerstone.getConfiguration(),
rendering: {
...cornerstone.getConfiguration().rendering,
strictZSpacingForVolumeViewport: appConfig.strictZSpacingForVolumeViewport,
},
});
// For debugging large datasets, otherwise prefer the defaults
const { maxCacheSize } = appConfig;
if (maxCacheSize) {
cornerstone.cache.setMaxCacheSize(maxCacheSize);
}
initCornerstoneTools();
Settings.getRuntimeSettings().set('useCursors', Boolean(appConfig.useCursors));
const {
userAuthenticationService,
customizationService,
uiModalService,
uiNotificationService,
cornerstoneViewportService,
hangingProtocolService,
viewportGridService,
stateSyncService,
studyPrefetcherService,
} = servicesManager.services;
window.services = servicesManager.services;
window.extensionManager = extensionManager;
window.commandsManager = commandsManager;
if (
appConfig.showWarningMessageForCrossOrigin &&
!window.crossOriginIsolated &&
!sharedArrayBufferDisabled
) {
uiNotificationService.show({
title: 'Cross Origin Isolation',
message:
'Cross Origin Isolation is not enabled, read more about it here: https://docs.ohif.org/faq/',
type: 'warning',
});
}
if (appConfig.showCPUFallbackMessage && cornerstone.getShouldUseCPURendering()) {
_showCPURenderingModal(uiModalService, hangingProtocolService);
}
// Stores a map from `lutPresentationId` to a Presentation object so that
// an OHIFCornerstoneViewport can be redisplayed with the same LUT
stateSyncService.register('lutPresentationStore', { clearOnModeExit: true });
// Stores synchronizers state to be restored
stateSyncService.register('synchronizersStore', { clearOnModeExit: true });
// Stores a map from `positionPresentationId` to a Presentation object so that
// an OHIFCornerstoneViewport can be redisplayed with the same position
stateSyncService.register('positionPresentationStore', {
clearOnModeExit: true,
});
// Stores the entire ViewportGridService getState when toggling to one up
// (e.g. via a double click) so that it can be restored when toggling back.
stateSyncService.register('toggleOneUpViewportGridStore', {
clearOnModeExit: true,
});
const labelmapRepresentation = cornerstoneTools.Enums.SegmentationRepresentations.Labelmap;
const contourRepresentation = cornerstoneTools.Enums.SegmentationRepresentations.Contour;
cornerstoneTools.segmentation.config.setGlobalRepresentationConfig(labelmapRepresentation, {
fillAlpha: 0.5,
fillAlphaInactive: 0.2,
outlineOpacity: 1,
outlineOpacityInactive: 0.65,
});
cornerstoneTools.segmentation.config.setGlobalRepresentationConfig(contourRepresentation, {
renderFill: false,
});
const metadataProvider = OHIF.classes.MetadataProvider;
volumeLoader.registerVolumeLoader(
'cornerstoneStreamingImageVolume',
cornerstoneStreamingImageVolumeLoader
);
volumeLoader.registerVolumeLoader(
'cornerstoneStreamingDynamicImageVolume',
cornerstoneStreamingDynamicImageVolumeLoader
);
hangingProtocolService.registerImageLoadStrategy('interleaveCenter', interleaveCenterLoader);
hangingProtocolService.registerImageLoadStrategy('interleaveTopToBottom', interleaveTopToBottom);
hangingProtocolService.registerImageLoadStrategy('nth', nthLoader);
// add metadata providers
metaData.addProvider(
csUtilities.calibratedPixelSpacingMetadataProvider.get.bind(
csUtilities.calibratedPixelSpacingMetadataProvider
)
); // this provider is required for Calibration tool
metaData.addProvider(metadataProvider.get.bind(metadataProvider), 9999);
// These are set reasonably low to allow for interleaved retrieves and slower
// connections.
imageLoadPoolManager.maxNumRequests = {
interaction: appConfig?.maxNumRequests?.interaction || 10,
thumbnail: appConfig?.maxNumRequests?.thumbnail || 5,
prefetch: appConfig?.maxNumRequests?.prefetch || 5,
};
initWADOImageLoader(userAuthenticationService, appConfig, extensionManager);
/* Measurement Service */
this.measurementServiceSource = connectToolsToMeasurementService(servicesManager);
initCineService(servicesManager);
initStudyPrefetcherService(servicesManager);
// When a custom image load is performed, update the relevant viewports
hangingProtocolService.subscribe(
hangingProtocolService.EVENTS.CUSTOM_IMAGE_LOAD_PERFORMED,
volumeInputArrayMap => {
for (const entry of volumeInputArrayMap.entries()) {
const [viewportId, volumeInputArray] = entry;
const viewport = cornerstoneViewportService.getCornerstoneViewport(viewportId);
const ohifViewport = cornerstoneViewportService.getViewportInfo(viewportId);
const { lutPresentationStore, positionPresentationStore } = stateSyncService.getState();
const { presentationIds } = ohifViewport.getViewportOptions();
const presentations = {
positionPresentation: positionPresentationStore[presentationIds?.positionPresentationId],
lutPresentation: lutPresentationStore[presentationIds?.lutPresentationId],
};
cornerstoneViewportService.setVolumesForViewport(viewport, volumeInputArray, presentations);
}
}
);
// resize the cornerstone viewport service when the grid size changes
// IMPORTANT: this should happen outside of the OHIFCornerstoneViewport
// since it will trigger a rerender of each viewport and each resizing
// the offscreen canvas which would result in a performance hit, this should
// done only once per grid resize here. Doing it once here, allows us to reduce
// the refreshRage(in ms) to 10 from 50. I tried with even 1 or 5 ms it worked fine
viewportGridService.subscribe(viewportGridService.EVENTS.GRID_SIZE_CHANGED, () => {
cornerstoneViewportService.resize(true);
});
initContextMenu({
cornerstoneViewportService,
customizationService,
commandsManager,
});
initDoubleClick({
customizationService,
commandsManager,
});
/**
* Runs error handler for failed requests.
* @param event
*/
const imageLoadFailedHandler = ({ detail }) => {
const handler = errorHandler.getHTTPErrorHandler();
handler(detail.error);
};
eventTarget.addEventListener(EVENTS.STACK_VIEWPORT_NEW_STACK, evt => {
const { element } = evt.detail;
cornerstoneTools.utilities.stackContextPrefetch.enable(element);
});
eventTarget.addEventListener(EVENTS.IMAGE_LOAD_FAILED, imageLoadFailedHandler);
eventTarget.addEventListener(EVENTS.IMAGE_LOAD_ERROR, imageLoadFailedHandler);
function elementEnabledHandler(evt) {
const { element } = evt.detail;
element.addEventListener(EVENTS.CAMERA_RESET, evt => {
const { element } = evt.detail;
const enabledElement = getEnabledElement(element);
if (!enabledElement) {
return;
}
const { viewportId } = enabledElement;
commandsManager.runCommand('resetCrosshairs', { viewportId });
});
// eventTarget.addEventListener(EVENTS.STACK_VIEWPORT_NEW_STACK, toolbarEventListener);
initViewTiming({ element });
}
function elementDisabledHandler(evt) {
const { element } = evt.detail;
// element.removeEventListener(EVENTS.CAMERA_RESET, resetCrosshairs);
// TODO - consider removing the callback when all elements are gone
// eventTarget.removeEventListener(
// EVENTS.STACK_VIEWPORT_NEW_STACK,
// newStackCallback
// );
}
eventTarget.addEventListener(EVENTS.ELEMENT_ENABLED, elementEnabledHandler.bind(null));
eventTarget.addEventListener(EVENTS.ELEMENT_DISABLED, elementDisabledHandler.bind(null));
colormaps.forEach(registerColormap);
// Event listener
eventTarget.addEventListenerDebounced(
EVENTS.ERROR_EVENT,
({ detail }) => {
uiNotificationService.show({
title: detail.type,
message: detail.message,
type: 'error',
});
},
1000
);
}
function CPUModal() {
return (
<div>
<p>
Your computer does not have enough GPU power to support the default GPU rendering mode. OHIF
has switched to CPU rendering mode. Please note that CPU rendering does not support all
features such as Volume Rendering, Multiplanar Reconstruction, and Segmentation Overlays.
</p>
</div>
);
}
function _showCPURenderingModal(uiModalService, hangingProtocolService) {
const callback = progress => {
if (progress === 100) {
uiModalService.show({
content: CPUModal,
title: 'OHIF Fell Back to CPU Rendering',
});
return true;
}
};
const { unsubscribe } = hangingProtocolService.subscribe(
hangingProtocolService.EVENTS.PROTOCOL_CHANGED,
() => {
const done = callback(100);
if (done) {
unsubscribe();
}
}
);
}