Compare commits

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Author SHA1 Message Date
ohif-bot cca3d6bff2 chore(release): publish [skip ci]
- @ohif/extension-dicom-rt@0.5.0
 - @ohif/viewer@4.7.0
2020-12-03 16:47:50 +00:00
Igor OctavianoandDavide Punzo f3cecf129b feat: Update approach to better handle rtdose instead of disabling panel
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 17:36:02 +01:00
ohif-bot fe03fc6f55 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.9.3
 - @ohif/viewer@4.6.3
2020-12-03 16:11:30 +00:00
Davide Punzo b59187c74d Re #2113: disable 2D MPR when datasets have multiple slices for the same ImagePositionPatient (#2160)
fix: disable 2D MPR when datasets are 4D
2020-12-03 17:08:38 +01:00
ohif-bot 5210c80369 chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.1.1
 - @ohif/extension-vtk@1.9.2
 - @ohif/core@2.11.1
 - @ohif/ui@1.7.1
 - @ohif/viewer@4.6.2
2020-12-03 15:19:00 +00:00
Igor OctavianoandDavide Punzo f57725ac8b fix: fallback to original dataset VR for XS
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 16:15:27 +01:00
ohif-bot 138e0fb3bf chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.1.0
 - @ohif/extension-vtk@1.9.1
 - @ohif/core@2.11.0
 - @ohif/ui@1.7.0
 - @ohif/viewer@4.6.1
2020-12-03 13:13:18 +00:00
be494a7376 feat: add show scroll option to modal
Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 14:09:45 +01:00
ohif-bot ab23feefbb chore(release): publish [skip ci]
- @ohif/extension-vtk@1.9.0
 - @ohif/ui@1.6.0
 - @ohif/viewer@4.6.0
2020-12-03 12:29:32 +00:00
Igor OctavianoandDavide Punzo 4c079044f6 feat: Add error boundary and retry logic for network failures during dynamic imports (#2145)
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 13:23:43 +01:00
ohif-bot 81fcfc7370 chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.0.5
2020-12-03 11:09:11 +00:00
Davide Punzo 6ec6446787 Merge pull request #2187 from OHIF/fix/tag-viewer-broken
Tag viewer broken for RTSTRUCT series
2020-12-03 11:59:58 +01:00
Davide Punzo 4b5a43641a Merge branch 'master' into fix/tag-viewer-broken 2020-12-03 11:39:23 +01:00
Erik Ziegler 2fb0b01fe2 ci: Fix release workflow issues with Gitbook-cli and missing executors (#2196) 2020-12-03 11:04:34 +01:00
ohif-bot 3632e5d495 chore(release): publish [skip ci]
- @ohif/viewer@4.5.29
2020-12-03 09:29:55 +00:00
Erik Ziegleranddannyrb dfe566e2aa ci: Use containerized PACS for running end-to-end tests #1122 (#1290)
* ci: Use containerized PACS for running end-to-end tests

* Try to fix cypress test results

Co-authored-by: dannyrb <danny.ri.brown@gmail.com>
2020-12-03 10:26:22 +01:00
Danny Brown 6c5ad9e98d change our definition of stale 2020-12-02 09:00:03 -05:00
igoroctaviano c0c3ab307d Add only valid sequences 2020-11-26 13:00:54 -03:00
64 changed files with 1347 additions and 625 deletions

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+45 -22
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@@ -13,11 +13,23 @@ version: 2.1
##
orbs:
codecov: codecov/codecov@1.0.5
cypress: cypress-io/cypress@1.13.0
cypress: cypress-io/cypress@1.26.0
executors:
# Custom executor to override Cypress config
deploy-to-prod-executor:
docker:
- image: 'cypress/browsers:node14.15.0-chrome86-ff82'
environment:
CYPRESS_BASE_URL: https://ohif-staging.netlify.com/
chrome-and-pacs:
docker:
# Primary container image where all steps run.
- image: 'cypress/browsers:node14.15.0-chrome86-ff82'
- image: 'ohif/viewer-testdata:0.1-test'
defaults: &defaults
docker:
- image: circleci/node:12.9.1
- image: circleci/node:14.15.0
environment:
TERM: xterm # Enable colors in term
QUICK_BUILD: true
@@ -170,7 +182,7 @@ jobs:
DEPLOY_TO_DEV:
docker:
- image: circleci/node:12.9.1
- image: circleci/node:14.15.0
environment:
TERM: xterm
NETLIFY_SITE_ID: 32708787-c9b0-4634-b50f-7ca41952da77
@@ -185,7 +197,7 @@ jobs:
DEPLOY_TO_STAGING:
docker:
- image: circleci/node:12.9.1
- image: circleci/node:14.15.0
environment:
TERM: xterm
NETLIFY_SITE_ID: c7502ae3-b150-493c-8422-05701e44a969
@@ -200,7 +212,7 @@ jobs:
DEPLOY_TO_PRODUCTION:
docker:
- image: circleci/node:12.9.1
- image: circleci/node:14.15.0
environment:
TERM: xterm
NETLIFY_SITE_ID: 79c4a5da-5c95-4dc9-84f7-45fd9dfe21b0
@@ -257,7 +269,12 @@ jobs:
paths: .
DOCS_PUBLISH:
<<: *defaults
docker:
# Gitbook fails due to graceful-fs updates above this node version :-(
- image: circleci/node:12.9.1
environment:
TERM: xterm # Enable colors in term
working_directory: ~/repo
steps:
- checkout
- run:
@@ -317,16 +334,19 @@ workflows:
# E2E: PWA
- cypress/run:
name: 'E2E: PWA'
executor: cypress/browsers-chrome76
executor: chrome-and-pacs
browser: chrome
pre-steps:
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
add wait-on' # Use yarn latest
- run: |
# Clear yarn cache; update to latest
rm -rf ~/.yarn
npm i -g yarn
yarn -v
yarn: true
record: false
store_artifacts: false
record: true
store_artifacts: true
working_directory: platform/viewer
build: npx cross-env QUICK_BUILD=true yarn run build
build: npx cross-env QUICK_BUILD=true APP_CONFIG=config/dicomweb-server.js yarn run build
start: yarn run test:e2e:serve
spec: 'cypress/integration/common/**/*,cypress/integration/pwa/**/*'
wait-on: 'http://localhost:3000'
@@ -337,21 +357,22 @@ workflows:
path: platform/viewer/cypress/screenshots
- store_artifacts:
path: platform/viewer/cypress/videos
- store_test_results:
path: platform/viewer/cypress/results
requires:
- UNIT_TESTS
# E2E: script-tag
- cypress/run:
name: 'E2E: Script Tag'
executor: cypress/browsers-chrome76
executor: chrome-and-pacs
browser: chrome
pre-steps:
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
add wait-on' # Use yarn latest
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v' # Use yarn latest
yarn: true
record: false
store_artifacts: false
record: true
store_artifacts: true
working_directory: platform/viewer
build: npx cross-env QUICK_BUILD=true yarn run build:package
build: npx cross-env QUICK_BUILD=true APP_CONFIG=config/dicomweb-server.js yarn run build:package
start: yarn run test:e2e:serve
spec: 'cypress/integration/common/**/*,cypress/integration/script-tag/**/*'
wait-on: 'http://localhost:3000'
@@ -362,6 +383,8 @@ workflows:
path: platform/viewer/cypress/screenshots
- store_artifacts:
path: platform/viewer/cypress/videos
- store_test_results:
path: platform/viewer/cypress/results
requires:
- UNIT_TESTS
@@ -372,7 +395,7 @@ workflows:
# Update hub.docker.org
- cypress/run:
name: 'Generate Percy Snapshots'
executor: cypress/browsers-chrome76
executor: chrome-and-pacs
browser: chrome
pre-steps:
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
@@ -380,7 +403,7 @@ workflows:
yarn: true
store_artifacts: false
working_directory: platform/viewer
build: npx cross-env QUICK_BUILD=true yarn run build
build: npx cross-env QUICK_BUILD=true APP_CONFIG=config/dicomweb-server.js yarn run build
# start server --> verify running --> percy + chrome + cypress
command: yarn run test:e2e:dist
cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
@@ -449,7 +472,7 @@ workflows:
# and record a Cypress dashboard test run
- cypress/run:
name: 'Generate Percy Snapshots'
executor: cypress/browsers-chrome76
executor: chrome-and-pacs
browser: chrome
pre-steps:
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
@@ -457,7 +480,7 @@ workflows:
yarn: true
store_artifacts: false
working_directory: platform/viewer
build: npx cross-env QUICK_BUILD=true yarn run build
build: npx cross-env QUICK_BUILD=true APP_CONFIG=config/dicomweb-server.js yarn run build
# start server --> verify running --> percy + chrome + cypress
command: yarn run test:e2e:dist
cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
+2 -2
View File
@@ -2,9 +2,9 @@
# https://github.com/apps/stale
#
# Number of days of inactivity before an issue becomes stale
daysUntilStale: 21
daysUntilStale: 180
# Number of days of inactivity before a stale issue is closed
daysUntilClose: 7
daysUntilClose: 9000
# Issues with these labels will never be considered stale
exemptLabels:
- 'Story :raised_hands:'
+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
# [0.5.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.9...@ohif/extension-dicom-rt@0.5.0) (2020-12-03)
### Features
* Update approach to better handle rtdose instead of disabling panel ([f3cecf1](https://github.com/OHIF/Viewers/commit/f3cecf129b16f8d24d239aa44fdff7f46e6ba683))
## [0.4.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.8...@ohif/extension-dicom-rt@0.4.9) (2020-10-12)
**Note:** Version bump only for package @ohif/extension-dicom-rt
+1 -1
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-rt",
"version": "0.4.9",
"version": "0.5.0",
"description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
"author": "OHIF",
"license": "MIT",
@@ -1,4 +1,4 @@
import React, { useState, useEffect } from 'react';
import React, { useState, useEffect, useCallback } from 'react';
import PropTypes from 'prop-types';
import cornerstoneTools from 'cornerstone-tools';
import cornerstone from 'cornerstone-core';
@@ -31,19 +31,20 @@ const refreshViewport = () => {
*
* @param {Object} props
* @param {Array} props.studies
* @param {Array} props.viewports - viewportSpecificData
* @param {Array} props.getActiveViewport - get active viewport data
* @param {number} props.activeIndex - activeViewportIndex
* @param {number} props.isOpen - isOpen
* @returns component
*/
const RTPanel = ({
studies,
viewports,
activeIndex,
isOpen,
onContourItemClick,
activeContexts = [],
contexts = {},
activeViewport,
getActiveViewport
}) => {
const isVTK = () => activeContexts.includes(contexts.VTK);
const isCornerstone = () => activeContexts.includes(contexts.CORNERSTONE);
@@ -54,11 +55,11 @@ const RTPanel = ({
referencedDisplaysets: [],
sets: [],
selectedSet: null,
isLocked: false
};
const [state, setState] = useState(DEFAULT_STATE);
const [showSettings, setShowSettings] = useState(false);
const activeViewport = viewports[activeIndex];
/*
* TODO: Improve the way we notify parts of the app that depends on rts to be loaded.
@@ -81,27 +82,32 @@ const RTPanel = ({
document.addEventListener('extensiondicomrtrtloaded', updateStructureSets);
return () => {
document.removeEventListener(
'extensiondicomrtrtloaded',
updateStructureSets
);
document.removeEventListener('extensiondicomrtrtloaded', updateStructureSets);
};
}, []);
useEffect(() => {
const studyMetadata = studyMetadataManager.get(activeViewport.StudyInstanceUID);
const referencedDisplaysets = studyMetadata.getDerivedDatasets({
referencedSeriesInstanceUID: activeViewport.SeriesInstanceUID,
Modality: 'RTSTRUCT',
});
setState(state => ({ ...state, isLocked: !referencedDisplaysets.length }));
}, [activeViewport]);
const updateStructureSets = () => {
const viewport = getActiveViewport();
const module = cornerstoneTools.getModule('rtstruct');
const StructureSets = module.state.StructureSets;
if (StructureSets && StructureSets.length) {
const viewportSets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
activeViewport.SeriesInstanceUID
viewport.SeriesInstanceUID
);
const studyMetadata = studyMetadataManager.get(
activeViewport.StudyInstanceUID
);
const studyMetadata = studyMetadataManager.get(viewport.StudyInstanceUID);
const referencedDisplaysets = studyMetadata.getDerivedDatasets({
referencedSeriesInstanceUID: activeViewport.SeriesInstanceUID,
referencedSeriesInstanceUID: viewport.SeriesInstanceUID,
Modality: 'RTSTRUCT',
});
@@ -118,10 +124,6 @@ const RTPanel = ({
}
};
useEffect(() => {
updateStructureSets();
}, [studies, viewports, activeIndex]);
useEffect(() => {
setShowSettings(showSettings && !isOpen);
}, [isOpen]);
@@ -232,78 +234,80 @@ const RTPanel = ({
<div className="dcmrt-panel">
<div className="dcmrt-panel-header">
<h3>RT Structure Sets</h3>
<Icon
className="cog-icon"
name="cog"
width="25px"
height="25px"
onClick={() => setShowSettings(true)}
/>
{!state.isLocked && (
<Icon
className="cog-icon"
name="cog"
width="25px"
height="25px"
onClick={() => setShowSettings(true)}
/>
)}
</div>
{!state.referencedDisplaysets.length && (
<LoadingIndicator expand height="70px" width="70px" />
)}
{state.sets &&
state.referencedDisplaysets.map(displaySet => {
const { SeriesInstanceUID, metadata, isLoaded } = displaySet;
{!state.isLocked && !state.referencedDisplaysets.length && <LoadingIndicator expand height="70px" width="70px" />}
{state.sets && state.referencedDisplaysets.map(displaySet => {
const { SeriesInstanceUID, metadata, isLoaded } = displaySet;
const module = cornerstoneTools.getModule('rtstruct');
const sets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
viewports[activeIndex].SeriesInstanceUID
);
const module = cornerstoneTools.getModule('rtstruct');
const sets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
activeViewport.SeriesInstanceUID
);
const loadedSet = sets.find(
set => set.SeriesInstanceUID === SeriesInstanceUID
);
return (
<PanelSection
key={SeriesInstanceUID}
title={metadata.StructureSetLabel}
loading={!isLoaded || !loadedSet}
visible={isLoaded && loadedSet && loadedSet.visible}
hideVisibleButton={!isLoaded}
expanded={
isLoaded &&
loadedSet.SeriesInstanceUID ===
state.selectedSet.SeriesInstanceUID
const loadedSet = sets.find(
set => set.SeriesInstanceUID === SeriesInstanceUID
);
if (!loadedSet) return null;
return (
<PanelSection
key={SeriesInstanceUID}
title={metadata.StructureSetLabel}
loading={!isLoaded || !loadedSet}
visible={isLoaded && loadedSet && loadedSet.visible}
hideVisibleButton={!isLoaded}
expanded={
isLoaded &&
loadedSet.SeriesInstanceUID ===
state.selectedSet.SeriesInstanceUID
}
onVisibilityChange={newVisibility => {
const module = cornerstoneTools.getModule('rtstruct');
if (newVisibility) {
module.setters.showStructureSet(loadedSet.SeriesInstanceUID);
} else {
module.setters.hideStructureSet(loadedSet.SeriesInstanceUID);
}
onVisibilityChange={newVisibility => {
const sets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
activeViewport.SeriesInstanceUID
);
setState(state => ({ ...state, sets }));
refreshViewport();
}}
onExpandChange={async () => {
if (!isLoaded) {
await displaySet.load(activeViewport, studies);
const module = cornerstoneTools.getModule('rtstruct');
if (newVisibility) {
module.setters.showStructureSet(loadedSet.SeriesInstanceUID);
} else {
module.setters.hideStructureSet(loadedSet.SeriesInstanceUID);
}
const sets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
viewports[activeIndex].SeriesInstanceUID
activeViewport.SeriesInstanceUID
);
setState(state => ({ ...state, sets }));
refreshViewport();
}}
onExpandChange={async () => {
if (!isLoaded) {
await displaySet.load(viewports[activeIndex], studies);
const module = cornerstoneTools.getModule('rtstruct');
const sets = module.getters.structuresSetsWhichReferenceSeriesInstanceUid(
viewports[activeIndex].SeriesInstanceUID
);
const selectedSet = sets.find(
set => set.SeriesInstanceUID === SeriesInstanceUID
);
setState(state => ({ ...state, selectedSet, sets }));
}
}}
>
<ScrollableArea>
<TableList headless>
{isLoaded &&
loadedSet.ROIContours.map(c => toContourItem(c, loadedSet))}
</TableList>
</ScrollableArea>
</PanelSection>
);
})}
const selectedSet = sets.find(
set => set.SeriesInstanceUID === SeriesInstanceUID
);
setState(state => ({ ...state, selectedSet, sets }));
}
}}
>
<ScrollableArea>
<TableList headless>
{isLoaded &&
loadedSet.ROIContours.map(c => toContourItem(c, loadedSet))}
</TableList>
</ScrollableArea>
</PanelSection>
);
})}
</div>
);
};
+5 -5
View File
@@ -90,11 +90,11 @@ export default async function loadRTStruct(
const sopInstanceUID = ContourImageSequence
? ContourImageSequence.ReferencedSOPInstanceUID
: _getClosestSOPInstanceUID(
ContourData,
ContourGeometricType,
NumberOfContourPoints,
imageIdSopInstanceUidPairs
);
ContourData,
ContourGeometricType,
NumberOfContourPoints,
imageIdSopInstanceUidPairs
);
const imageId = _getImageId(imageIdSopInstanceUidPairs, sopInstanceUID);
const imageIdSpecificToolData = _getOrCreateImageIdSpecificToolData(
toolState,
+30
View File
@@ -3,6 +3,36 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [0.1.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.1.0...@ohif/extension-dicom-tag-browser@0.1.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [0.1.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.0.5...@ohif/extension-dicom-tag-browser@0.1.0) (2020-12-03)
### Features
* add show scroll option to modal ([be494a7](https://github.com/OHIF/Viewers/commit/be494a7376d15777dbe598289c4ecdb9f48a6a48))
## [0.0.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.0.4...@ohif/extension-dicom-tag-browser@0.0.5) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-dicom-tag-browser
## [0.0.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.0.3...@ohif/extension-dicom-tag-browser@0.0.4) (2020-10-07)
**Note:** Version bump only for package @ohif/extension-dicom-tag-browser
+1 -1
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-tag-browser",
"version": "0.0.4",
"version": "0.1.1",
"description": "OHIF extension for checking DICOM headers.",
"author": "OHIF",
"license": "MIT",
@@ -1,5 +1,5 @@
import React, { useState, useEffect } from 'react';
import { classes } from '@ohif/core';
import { classes, cornerstone as OHIFCornerstone } from '@ohif/core';
import dcmjs from 'dcmjs';
import DicomBrowserSelect from './DicomBrowserSelect';
import moment from 'moment';
@@ -10,6 +10,8 @@ const { ImageSet } = classes;
const { DicomMetaDictionary } = dcmjs.data;
const { nameMap } = DicomMetaDictionary;
const { metadataProvider } = OHIFCornerstone;
const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
const [
activeDisplaySetInstanceUID,
@@ -17,6 +19,7 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
] = useState(displaySetInstanceUID);
const [activeInstance, setActiveInstance] = useState(0);
const [tags, setTags] = useState([]);
const [meta, setMeta] = useState('');
const [instanceList, setInstanceList] = useState([]);
const [displaySetList, setDisplaySetList] = useState([]);
const [isImageStack, setIsImageStack] = useState(false);
@@ -83,6 +86,7 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
}
setTags(getSortedTags(metadata));
setMeta(metadata);
setInstanceList(instanceList);
setDisplaySetList(newDisplaySetList);
setIsImageStack(isImageStack);
@@ -114,41 +118,43 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
options={displaySetList}
/>
{instanceSelectList}
<DicomTagTable tags={tags}></DicomTagTable>
<DicomTagTable tags={tags} meta={meta}></DicomTagTable>
</div>
);
};
function DicomTagTable({ tags }) {
const rows = getFormattedRowsFromTags(tags);
function DicomTagTable({ tags, meta }) {
const rows = getFormattedRowsFromTags(tags, meta);
return (
<div>
<table className="dicom-tag-browser-table">
<tr>
<th className="dicom-tag-browser-table-left">Tag</th>
<th className="dicom-tag-browser-table-left">Value Representation</th>
<th className="dicom-tag-browser-table-left">Keyword</th>
<th className="dicom-tag-browser-table-left">Value</th>
</tr>
{rows.map(row => {
const className = row.className ? row.className : null;
<tbody>
<tr>
<th className="dicom-tag-browser-table-left">Tag</th>
<th className="dicom-tag-browser-table-left">Value Representation</th>
<th className="dicom-tag-browser-table-left">Keyword</th>
<th className="dicom-tag-browser-table-left">Value</th>
</tr>
{rows.map((row, index) => {
const className = row.className ? row.className : null;
return (
<tr className={className}>
<td>{row[0]}</td>
<td className="dicom-tag-browser-table-center">{row[1]}</td>
<td>{row[2]}</td>
<td>{row[3]}</td>
</tr>
);
})}
return (
<tr className={className} key={`DICOMTagRow-${index}`}>
<td>{row[0]}</td>
<td className="dicom-tag-browser-table-center">{row[1]}</td>
<td>{row[2]}</td>
<td>{row[3]}</td>
</tr>
);
})}
</tbody>
</table>
</div>
);
}
function getFormattedRowsFromTags(tags) {
function getFormattedRowsFromTags(tags, meta) {
const rows = [];
tags.forEach(tagInfo => {
@@ -175,6 +181,17 @@ function getFormattedRowsFromTags(tags) {
rows.push(...formatedRowsFromTags);
});
} else {
if (tagInfo.vr === 'xs') {
try {
const dataset = metadataProvider.getStudyDataset(meta.StudyInstanceUID);
const tag = dcmjs.data.Tag.fromPString(tagInfo.tag).toCleanString();
const originalTagInfo = dataset[tag];
tagInfo.vr = originalTagInfo.vr;
} catch (error) {
console.error(`Failed to parse value representation for tag '${tagInfo.keyword}'`);
}
}
rows.push([
`${tagInfo.tagIndent}${tagInfo.tag}`,
tagInfo.vr,
@@ -247,10 +264,11 @@ function getRows(metadata, depth = 0) {
sequenceAsArray.forEach(item => {
const sequenceRows = getRows(item, depth + 1);
// Sort the sequence group.
_sortTagList(sequenceRows);
sequence.values.push(sequenceRows);
if (sequenceRows.length) {
// Sort the sequence group.
_sortTagList(sequenceRows);
sequence.values.push(sequenceRows);
}
});
continue;
@@ -276,13 +294,12 @@ function getRows(metadata, depth = 0) {
} else if (value.Alphabetic) {
value = value.Alphabetic;
} else {
console.error('Unrecognised Value for element:');
console.error(value);
console.warn(`Unrecognised Value: ${value} for ${keyword}:`);
console.warn(value);
value = ' ';
}
} else {
console.error('Unrecognised Value for element:');
console.error(value);
console.warn(`Unrecognised Value: ${value} for ${keyword}:`);
value = ' ';
}
}
@@ -21,7 +21,7 @@ export default function getCommandsModule(servicesManager) {
const { UIModalService } = servicesManager.services;
const WrappedDicomTagBrowser = function() {
const WrappedDicomTagBrowser = function () {
return (
<DicomTagBrowser
displaySets={displaySets}
@@ -34,6 +34,7 @@ export default function getCommandsModule(servicesManager) {
content: WrappedDicomTagBrowser,
title: `DICOM Tag Browser`,
fullscreen: true,
showScrollbar: true
});
},
};
+35
View File
@@ -3,6 +3,41 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.9.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.9.2...@ohif/extension-vtk@1.9.3) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-vtk
## [1.9.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.9.1...@ohif/extension-vtk@1.9.2) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-vtk
## [1.9.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.9.0...@ohif/extension-vtk@1.9.1) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-vtk
# [1.9.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.8.0...@ohif/extension-vtk@1.9.0) (2020-12-03)
### Features
* Add error boundary and retry logic for network failures during dynamic imports ([#2145](https://github.com/OHIF/Viewers/issues/2145)) ([4c07904](https://github.com/OHIF/Viewers/commit/4c079044f6ae2381c6054d8d77414100152d1d19))
# [1.8.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.16...@ohif/extension-vtk@1.8.0) (2020-11-30)
+3 -3
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-vtk",
"version": "1.8.0",
"version": "1.9.3",
"description": "OHIF extension for VTK.js",
"author": "OHIF",
"license": "MIT",
@@ -53,8 +53,8 @@
"react-vtkjs-viewport": "^0.14.2"
},
"devDependencies": {
"@ohif/core": "^2.10.7",
"@ohif/ui": "^1.5.7",
"@ohif/core": "^2.11.1",
"@ohif/ui": "^1.7.1",
"cornerstone-tools": "^4.20.1",
"cornerstone-wado-image-loader": "^3.1.0",
"dicom-parser": "^1.8.3",
-37
View File
@@ -1,37 +0,0 @@
/**
* We use this component to leverage "Code Splitting"
*
* Link: https://serverless-stack.com/chapters/code-splitting-in-create-react-app.html
*/
import React, { Component } from 'react';
export default function asyncComponent(importComponent) {
class AsyncComponent extends Component {
constructor(props) {
super(props);
this.state = {
component: null,
};
}
async componentDidMount() {
// Add dynamically loaded component to state
const { default: component } = await importComponent();
this.setState({
component: component,
});
}
render() {
const C = this.state.component;
// Render the loaded component, or null
return C ? <C {...this.props} /> : null;
}
}
return AsyncComponent;
}
+3 -2
View File
@@ -1,5 +1,6 @@
import React from 'react';
import asyncComponent from './asyncComponent.js';
import { asyncComponent, retryImport } from '@ohif/ui';
import commandsModule from './commandsModule.js';
import toolbarModule from './toolbarModule.js';
import withCommandsManager from './withCommandsManager.js';
@@ -8,7 +9,7 @@ import { version } from '../package.json';
// import loadLocales from './loadLocales';
const OHIFVTKViewport = asyncComponent(() =>
import(/* webpackChunkName: "OHIFVTKViewport" */ './OHIFVTKViewport.js')
retryImport(() => import(/* webpackChunkName: "OHIFVTKViewport" */ './OHIFVTKViewport.js'))
);
const vtkExtension = {
@@ -31,7 +31,57 @@ const _isDisplaySetReconstructable = (viewportSpecificData = {}, activeViewportI
if (!displaySet) {
return false;
};
}
// 2D MPR is not currently available for 4D datasets.
// Assuming that slices at different time have the same position, here we just check if
// there are multiple slices for the same ImagePositionPatient and disable MPR.
// A better heuristic would be checking 4D tags, e.g. the presence of multiple TemporalPositionIdentifier values.
// However, some studies (e.g. https://github.com/OHIF/Viewers/issues/2113) do not have such tags.
for (let ii = 0; ii < displaySet.numImageFrames; ++ii){
const imageIdControl = displaySet.images[ii].getImageId()
const instanceMetadataControl = cornerstone.metaData.get('instance', imageIdControl)
if (!instanceMetadataControl ||
instanceMetadataControl === undefined ||
!instanceMetadataControl.ImagePositionPatient ||
instanceMetadataControl.ImagePositionPatient === undefined ) {
// if ImagePositionPatient is missing, skip the 4D datasets check.
// do not return false, because it could be a 3D dataset.
continue;
}
let xImagePositionPatientControl = instanceMetadataControl.ImagePositionPatient[0];
let yImagePositionPatientControl = instanceMetadataControl.ImagePositionPatient[1];
let zImagePositionPatientControl = instanceMetadataControl.ImagePositionPatient[2];
for (let jj = ii + 1; jj < displaySet.numImageFrames; ++jj){
const imageId = displaySet.images[jj].getImageId()
const instanceMetadata = cornerstone.metaData.get('instance', imageId)
if (!instanceMetadata ||
instanceMetadata === undefined ||
!instanceMetadata.ImagePositionPatient ||
instanceMetadata.ImagePositionPatient === undefined) {
// if ImagePositionPatient is missing, skip the 4D datasets check.
// do not return false, because it could be a 3D dataset.
continue;
}
let xImagePositionPatient = instanceMetadata.ImagePositionPatient[0];
let yImagePositionPatient = instanceMetadata.ImagePositionPatient[1];
let zImagePositionPatient = instanceMetadata.ImagePositionPatient[2];
if (xImagePositionPatientControl === xImagePositionPatient &&
yImagePositionPatientControl === yImagePositionPatient &&
zImagePositionPatientControl === zImagePositionPatient){
return false;
}
}
}
return displaySet.isReconstructable;
};
+1
View File
@@ -28,6 +28,7 @@
"test:unit": "jest --collectCoverage",
"test:unit:ci": "lerna run test:unit:ci --parallel --stream",
"test:e2e": "lerna run test:e2e --stream",
"test:e2e:script-tag": "lerna run test:e2e:script-tag --stream",
"test:e2e:ci": "lerna run test:e2e:ci --stream",
"test:e2e:dist": "lerna run test:e2e:dist --stream",
"test:e2e:serve": "lerna run test:e2e:serve --stream",
+22
View File
@@ -3,6 +3,28 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [2.11.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.11.0...@ohif/core@2.11.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [2.11.0](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.7...@ohif/core@2.11.0) (2020-12-03)
### Features
* add show scroll option to modal ([be494a7](https://github.com/OHIF/Viewers/commit/be494a7376d15777dbe598289c4ecdb9f48a6a48))
## [2.10.7](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.6...@ohif/core@2.10.7) (2020-10-07)
**Note:** Version bump only for package @ohif/core
+1 -1
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/core",
"version": "2.10.7",
"version": "2.11.1",
"description": "Generic business logic for web-based medical imaging applications",
"author": "OHIF Core Team",
"license": "MIT",
@@ -20,6 +20,7 @@ class MetadataProvider {
writable: false,
value: new Map(),
});
this.datasets = {};
}
async addInstance(dicomJSONDatasetOrP10ArrayBuffer, options = {}) {
@@ -52,6 +53,7 @@ class MetadataProvider {
SOPInstanceUID,
} = naturalizedDataset;
this._getAndCacheStudyDataset(StudyInstanceUID, dicomJSONDataset);
const study = this._getAndCacheStudy(StudyInstanceUID);
const series = this._getAndCacheSeriesFromStudy(study, SeriesInstanceUID);
const instance = this._getAndCacheInstanceFromStudy(series, SOPInstanceUID);
@@ -71,6 +73,16 @@ class MetadataProvider {
this.imageIdToUIDs.set(imageId, uids);
}
_getAndCacheStudyDataset(StudyInstanceUID, dataset) {
if (!this.datasets[StudyInstanceUID]) {
this.datasets[StudyInstanceUID] = dataset;
}
}
getStudyDataset(StudyInstanceUID) {
return this.datasets[StudyInstanceUID];
}
_getAndCacheStudy(StudyInstanceUID) {
const studies = this.studies;
@@ -83,6 +95,7 @@ class MetadataProvider {
return study;
}
_getAndCacheSeriesFromStudy(study, SeriesInstanceUID) {
let series = study.series.get(SeriesInstanceUID);
@@ -9,6 +9,7 @@
* @property {boolean} [closeButton=true] Should the modal body render the close button.
* @property {string} [title=null] Should the modal render the title independently of the body content.
* @property {string} [customClassName=null] The custom class to style the modal.
* @property {boolean} [showScrollbar=null] Show or hide scrollbar.
*/
const name = 'UIModalService';
@@ -28,7 +29,7 @@ const serviceImplementation = {
/**
* Show a new UI modal;
*
* @param {ModalProps} props { content, contentProps, shouldCloseOnEsc, isOpen, onClose, closeButton, title, customClassName }
* @param {ModalProps} props { content, contentProps, shouldCloseOnEsc, isOpen, onClose, closeButton, title, customClassName, showScrollbar }
*/
function _show({
content = null,
@@ -40,6 +41,7 @@ function _show({
title = null,
fullscreen = false,
customClassName = null,
showScrollbar = false
}) {
return serviceImplementation._show({
content,
@@ -51,6 +53,7 @@ function _show({
title,
fullscreen,
customClassName,
showScrollbar
});
}
+12 -12
View File
@@ -21,12 +21,12 @@ describe('Queue', () => {
const mockedTimeout = jest.fn(timeout);
const timer = queue.bind(mockedTimeout);
const start = Date.now();
timer(120).then(now => {
timer(1200).then(now => {
const elapsed = now - start;
expect(elapsed >= 120 && elapsed < 240).toBe(true);
expect(elapsed >= 1200 && elapsed < 2400).toBe(true);
});
const end = await timer(120);
expect(end - start > 240).toBe(true);
const end = await timer(1200);
expect(end - start > 2400).toBe(true);
expect(mockedTimeout).toBeCalledTimes(2);
});
it('should prevent task execution when queue limit is reached', async () => {
@@ -34,15 +34,15 @@ describe('Queue', () => {
const mockedTimeout = jest.fn(timeout);
const timer = queue.bind(mockedTimeout);
const start = Date.now();
const promise = timer(120).then(time => time - start);
const promise = timer(1200).then(time => time - start);
try {
await timer(120);
await timer(1200);
} catch (e) {
expect(Date.now() - start < 120).toBe(true);
expect(Date.now() - start < 1200).toBe(true);
expect(e.message).toBe('Queue limit reached');
}
const elapsed = await promise;
expect(elapsed >= 120 && elapsed < 240).toBe(true);
expect(elapsed >= 1200 && elapsed < 2400).toBe(true);
expect(mockedTimeout).toBeCalledTimes(1);
});
it('should safely bind tasks to the queue', async () => {
@@ -51,16 +51,16 @@ describe('Queue', () => {
const mockedTimeout = jest.fn(timeout);
const timer = queue.bindSafe(mockedTimeout, mockedErrorHandler);
const start = Date.now();
const promise = timer(120).then(time => time - start);
await timer(120);
expect(Date.now() - start < 120).toBe(true);
const promise = timer(1200).then(time => time - start);
await timer(1200);
expect(Date.now() - start < 1200).toBe(true);
expect(mockedErrorHandler).toBeCalledTimes(1);
expect(mockedErrorHandler).nthCalledWith(
1,
expect.objectContaining({ message: 'Queue limit reached' })
);
const elapsed = await promise;
expect(elapsed >= 120 && elapsed < 240).toBe(true);
expect(elapsed >= 1200 && elapsed < 2400).toBe(true);
expect(mockedTimeout).toBeCalledTimes(1);
});
});
+33
View File
@@ -3,6 +3,39 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.7.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.7.0...@ohif/ui@1.7.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [1.7.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.6.0...@ohif/ui@1.7.0) (2020-12-03)
### Features
* add show scroll option to modal ([be494a7](https://github.com/OHIF/Viewers/commit/be494a7376d15777dbe598289c4ecdb9f48a6a48))
# [1.6.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.5.7...@ohif/ui@1.6.0) (2020-12-03)
### Features
* Add error boundary and retry logic for network failures during dynamic imports ([#2145](https://github.com/OHIF/Viewers/issues/2145)) ([4c07904](https://github.com/OHIF/Viewers/commit/4c079044f6ae2381c6054d8d77414100152d1d19))
## [1.5.7](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.5.6...@ohif/ui@1.5.7) (2020-11-02)
+1 -1
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/ui",
"version": "1.5.7",
"version": "1.7.1",
"description": "A set of React components for Medical Imaging Viewers",
"author": "OHIF Contributors",
"license": "MIT",
@@ -15,8 +15,8 @@ const ErrorFallback = ({ error, componentStack, resetErrorBoundary }) => {
const OHIFErrorBoundary = ({
context = 'OHIF',
onReset = () => {},
onError = () => {},
onReset = () => { },
onError = () => { },
fallbackComponent,
children,
}) => {
@@ -45,7 +45,7 @@ OHIFErrorBoundary.propTypes = {
onReset: PropTypes.func,
onError: PropTypes.func,
children: PropTypes.node.isRequired,
fallbackComponent: PropTypes.element,
fallbackComponent: PropTypes.oneOfType([PropTypes.node, PropTypes.func, PropTypes.element]),
};
export default OHIFErrorBoundary;
@@ -0,0 +1,24 @@
.ErrorPage {
height: 100%;
width: 100%;
display: flex;
justify-content: center;
align-items: center;
flex-direction: column;
color: var(--active-color);
}
.ErrorPage .error-container {
margin: 10px;
width: 50%;
height: 25%;
overflow: scroll;
border-radius: 15px;
border-color: var(--active-color);
border: 1px solid;
padding: 5px;
}
.ErrorPage .retry-icon {
cursor: pointer;
}
@@ -0,0 +1,41 @@
import React from 'react';
import PropTypes from 'prop-types';
import { Icon } from '@ohif/ui';
import './ErrorPage.css';
const ErrorPage = ({ error, title, description, onRetry }) => {
return (
<div className="ErrorPage">
{title && <h3>{title}</h3>}
<p>{description}</p>
<Icon
className="retry-icon"
name="rotate-right"
width="25px"
height="25px"
onClick={onRetry}
/>
{error && (
<div className="error-container">
<pre>{error.message}</pre>
<pre>{error.stack}</pre>
</div>
)}
</div>
);
};
ErrorPage.propTypes = {
error: PropTypes.object,
title: PropTypes.string,
description: PropTypes.string,
onRetry: PropTypes.func
};
ErrorPage.defaultProps = {
description: 'Oh snap, something went wrong, please try reloading',
onRetry: () => window.location.reload()
};
export default ErrorPage;
@@ -0,0 +1,2 @@
import ErrorPage from './ErrorPage';
export default ErrorPage;
+2
View File
@@ -16,6 +16,7 @@ import { SelectTree } from './selectTree';
import { SimpleDialog } from './simpleDialog';
import { OHIFModal } from './ohifModal';
import { ContextMenu } from './contextMenu';
import ErrorPage from './errorPage';
import {
PageToolbar,
StudyList,
@@ -58,4 +59,5 @@ export {
Tooltip,
AboutContent,
OHIFModal,
ErrorPage
};
@@ -27,13 +27,13 @@
&.OHIFModal-fullscreen
width: 95%
&__content
padding: 20px
max-height: 90vh;
overflow-x: hidden;
overflow-y: auto;
&:not(.visibleScrollbar) &__content
overflow-x: hidden;
scrollbar-width: none;
-ms-overflow-style: none;
&::-webkit-scrollbar
@@ -34,6 +34,7 @@ const ModalProvider = ({ children, modal: Modal, service }) => {
isOpen: true,
onClose: null,
closeButton: true,
showScrollbar: false,
title: null,
customClassName: '',
fullscreen: false,
@@ -81,13 +82,14 @@ const ModalProvider = ({ children, modal: Modal, service }) => {
shouldCloseOnEsc,
fullscreen,
closeButton,
showScrollbar
} = options;
return (
<Provider value={{ show, hide }}>
{ModalContent && (
<Modal
className={classNames(customClassName, ModalContent.className)}
className={classNames(customClassName, ModalContent.className, { 'visibleScrollbar': showScrollbar })}
shouldCloseOnEsc={shouldCloseOnEsc}
isOpen={isOpen}
title={title}
+8 -2
View File
@@ -29,7 +29,8 @@ import {
Tooltip,
AboutContent,
OHIFModal,
ErrorBoundary
ErrorBoundary,
ErrorPage
} from './components';
import { useDebounce, useMedia } from './hooks';
@@ -53,6 +54,7 @@ import { ScrollableArea } from './ScrollableArea/ScrollableArea.js';
import Toolbar from './viewer/Toolbar.js';
import ToolbarButton from './viewer/ToolbarButton.js';
import ViewerbaseDragDropContext from './utils/viewerbaseDragDropContext.js';
import { asyncComponent, retryImport } from './utils/asyncComponent';
import {
SnackbarProvider,
useSnackbarContext,
@@ -112,7 +114,6 @@ export {
ToolbarSection,
Tooltip,
AboutContent,
ViewerbaseDragDropContext,
SnackbarProvider,
useSnackbarContext,
withSnackbar,
@@ -125,7 +126,12 @@ export {
withDialog,
useDialog,
ErrorBoundary,
ErrorPage,
// Hooks
useDebounce,
useMedia,
// Utils
ViewerbaseDragDropContext,
asyncComponent,
retryImport
};
@@ -0,0 +1,62 @@
import React, { useState, useEffect } from 'react';
import { ErrorPage } from '@ohif/ui';
export const retryImport = (fn, retriesLeft = 5, interval = 1000) =>
new Promise((resolve, reject) => {
fn().then(resolve).catch((error) => {
setTimeout(() => {
if (retriesLeft === 1) {
/* reject('maximum retries exceeded'); */
reject(error);
return;
}
/* Passing on "reject" is the important part */
retry(fn, retriesLeft - 1, interval).then(resolve, reject);
}, interval);
});
});
const onError = (error, setState) => setState({ component: ErrorPage });
/**
* We use this function to lazy load the import of a component to leverage 'Code Splitting'
* Link: https://serverless-stack.com/chapters/code-splitting-in-create-react-app.html
*/
const asyncComponent = (importComponent, options = { onError }) => props => {
const [state, setState] = useState({ component: null });
const isFunction = item => typeof item === 'function';
const isChunkError = error => error.toString().indexOf('ChunkLoadError') > -1;
useEffect(() => {
const addDynamicallyLoadedComponentToState = async () => {
try {
const { default: component } = await importComponent();
setState({ component });
if (options.onLoaded && isFunction(options.onLoaded)) {
options.onLoaded(component);
}
} catch (error) {
console.error('[AsyncComponent] Failed to import chunk:', error);
if (options.onError && isFunction(options.onError)) {
options.onError(error, setState);
return;
}
if (isChunkError(error)) {
console.error('[AsyncComponent] Reloading due to chunk error');
window.location.reload();
}
}
};
addDynamicallyLoadedComponentToState();
}, []);
const Component = state.component;
return Component ? <Component {...props} /> : null;
};
export default asyncComponent;
@@ -0,0 +1,2 @@
export { default as asyncComponent } from './asyncComponent';
export { retryImport } from './asyncComponent';
+54
View File
@@ -3,6 +3,60 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
# [4.7.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.3...@ohif/viewer@4.7.0) (2020-12-03)
### Features
* Update approach to better handle rtdose instead of disabling panel ([f3cecf1](https://github.com/OHIF/Viewers/commit/f3cecf129b16f8d24d239aa44fdff7f46e6ba683))
## [4.6.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.2...@ohif/viewer@4.6.3) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
## [4.6.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.1...@ohif/viewer@4.6.2) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
## [4.6.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.0...@ohif/viewer@4.6.1) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
# [4.6.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.29...@ohif/viewer@4.6.0) (2020-12-03)
### Features
* Add error boundary and retry logic for network failures during dynamic imports ([#2145](https://github.com/OHIF/Viewers/issues/2145)) ([4c07904](https://github.com/OHIF/Viewers/commit/4c079044f6ae2381c6054d8d77414100152d1d19))
## [4.5.29](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.28...@ohif/viewer@4.5.29) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
## [4.5.28](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.27...@ohif/viewer@4.5.28) (2020-11-30)
**Note:** Version bump only for package @ohif/viewer
+6 -1
View File
@@ -6,5 +6,10 @@
"requestTimeout": 10000,
"responseTimeout": 10000,
"projectId": "4oe38f",
"video": false
"video": false,
"reporter": "junit",
"reporterOptions": {
"mochaFile": "cypress/results/test-output.xml",
"toConsole": true
}
}
@@ -3,7 +3,7 @@ describe('OHIF Cornerstone Hotkeys', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -3,12 +3,18 @@ describe('OHIF Cornerstone Toolbar', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
cy.initCornerstoneToolsAliases();
cy.initCommonElementsAliases();
cy.get('[data-cy="thumbnail-list"]:nth-child(1)').click();
const expectedText = 'Ser: 1';
cy.get('@viewportInfoBottomLeft').should('contains.text', expectedText);
cy.resetViewport();
});
@@ -49,7 +55,7 @@ describe('OHIF Cornerstone Toolbar', () => {
});
it('checks if Stack Scroll tool will navigate across all series in the viewport', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@stackScrollBtn')
.click()
.then($stackScrollBtn => {
@@ -85,7 +91,7 @@ describe('OHIF Cornerstone Toolbar', () => {
});
it('checks if Levels tool will change the contrast and brightness of an image in the viewport', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@levelsBtn')
.click()
.then($levelsBtn => {
@@ -106,7 +112,7 @@ describe('OHIF Cornerstone Toolbar', () => {
});
it('checks if Pan tool will move the image inside the viewport', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@panBtn')
.click()
.then($panBtn => {
@@ -120,7 +126,7 @@ describe('OHIF Cornerstone Toolbar', () => {
});
it('checks if Length annotation can be added on viewport and on measurements panel', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@lengthBtn')
.click()
.then($lengthbtn => {
@@ -147,7 +153,7 @@ describe('OHIF Cornerstone Toolbar', () => {
});
it('checks if Angle annotation can be added on viewport and on measurements panel', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@angleBtn')
.click()
.then($angleBtn => {
@@ -192,7 +198,8 @@ describe('OHIF Cornerstone Toolbar', () => {
//Click on button
cy.get('@cineBtn').click();
//Vefiry if cine control overlay is being displayed
// Verify if cine control overlay is being displayed
cy.get('.cine-controls')
.as('cineControls')
.should('be.visible');
@@ -253,13 +260,15 @@ describe('OHIF Cornerstone Toolbar', () => {
cy.get('@cineBtn')
.click()
.then(() => {
//Vefiry if cine control overlay is hidden
cy.get('@cineControls').should('not.be.visible');
// Verify that cine control overlay is hidden
cy.get('@cineControls').should('not.exist');
});
});
it('checks if More button will prompt a modal with secondary tools', () => {
//Click on More button
cy.get('@moreBtn').click();
//Verify if overlay is displayed
cy.get('.tooltip-toolbar-overlay')
.as('toolbarOverlay')
@@ -288,9 +297,10 @@ describe('OHIF Cornerstone Toolbar', () => {
});
//Verify if overlay is hidden
cy.get('@toolbarOverlay').should('not.be.visible');
cy.get('@toolbarOverlay').should('not.exist');
});
it('checks if Layout tool will multiply the number of viewports displayed', () => {
//Click on Layout button and verify if overlay is displayed
cy.get('@layoutBtn')
@@ -415,7 +425,7 @@ describe('OHIF Cornerstone Toolbar', () => {
// TODO: We need a seperate test server for this to work.
// As anyone can save measurements on a different slice.
cy.get('.measurementItem'); //.should('not.exist');
//cy.get('.measurementItem'); //.should('not.exist');
//Close More button overlay
cy.get('@moreBtn').click();
@@ -439,6 +449,9 @@ describe('OHIF Cornerstone Toolbar', () => {
cy.get('@viewportInfoMidLeft').should('contains.text', 'F');
cy.get('@viewportInfoMidTop').should('contains.text', 'R');
});
//Click on More button to close it
cy.get('@moreBtn').click();
});
it('check if Flip H tool will flip the image horizontally in the viewport', () => {
@@ -451,6 +464,10 @@ describe('OHIF Cornerstone Toolbar', () => {
cy.get('[data-cy="flip h"]').click();
cy.get('@viewportInfoMidLeft').should('contains.text', 'L');
cy.get('@viewportInfoMidTop').should('contains.text', 'H');
//Click on More button to close it
cy.get('@moreBtn').click();
cy.get('.tooltip-toolbar-overlay').should('not.exist');
});
it('check if Flip V tool will flip the image vertically in the viewport', () => {
@@ -463,5 +480,9 @@ describe('OHIF Cornerstone Toolbar', () => {
cy.get('[data-cy="flip v"]').click();
cy.get('@viewportInfoMidLeft').should('contains.text', 'R');
cy.get('@viewportInfoMidTop').should('contains.text', 'F');
//Click on More button to close it
cy.get('@moreBtn').click();
cy.get('.tooltip-toolbar-overlay').should('not.exist');
});
});
@@ -3,7 +3,7 @@ describe('OHIF Download Snapshot File', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -22,51 +22,54 @@ describe('OHIF Study List', function() {
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(3);
expect($list.length).to.be.eq(1);
expect($list).to.contain('Juno');
});
});
it('searches MRN with exact string', function() {
cy.get('@MRN').type('ProstateX-0000');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(2);
expect($list).to.contain('ProstateX-0000');
});
});
it('searches Accession with exact string', function() {
cy.get('@AccessionNumber').type('0000481914');
cy.get('@MRN').type('0000003');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(1);
expect($list).to.contain('0000481914');
expect($list).to.contain('0000003');
});
});
it('searches Accession with exact string', function() {
cy.get('@AccessionNumber').type('0000155811');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(1);
expect($list).to.contain('0000155811');
});
});
it('searches Modality with camel case', function() {
cy.get('@modalities').type('Mr');
cy.get('@modalities').type('Ct');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
// TODO: Why are we facing some inconsistency with this result? ¯\_(ツ)_/¯
expect($list.length).to.be.eq(9);
expect($list).to.contain('MR');
expect($list.length).to.be.greaterThan(1);
expect($list).to.contain('CT');
});
});
/*
TODO: Currently broken in dicomweb-server
it('searches Description with exact string', function() {
cy.get('@StudyDescription').type('CHEST');
cy.get('@StudyDescription').type('PETCT');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(2);
expect($list).to.contain('CHEST');
expect($list.length).to.be.eq(1);
expect($list).to.contain('PETCT');
});
});
*/
it('changes Rows per page and checks the study count', function() {
//Show Rows per page options
@@ -128,52 +131,60 @@ describe('OHIF Study List', function() {
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(3);
expect($list.length).to.be.eq(1);
expect($list).to.contain('Juno');
});
});
it('searches MRN with with exact string', function() {
cy.get('@patientNameOrMRN').type('ProstateX-0000');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(6);
expect($list).to.contain('ProstateX-0000');
});
});
it('searches Modality with exact string', function() {
cy.get('@accessionModalityDescription').type('MR');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
// TODO: Why are we facing some inconsistency with this result? ¯\_(ツ)_/¯
expect($list.length).to.be.eq(9);
expect($list).to.contain('MR');
});
});
it('searches Accession with exact string', function() {
cy.get('@accessionModalityDescription').type('0000481914');
cy.get('@patientNameOrMRN').type('Juno');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(1);
expect($list).to.contain('0000481914');
expect($list).to.contain('Juno');
});
});
it('searches Description with exact string', function() {
cy.get('@accessionModalityDescription').type('CHEST');
it('searches Modality with exact string', function() {
cy.get('@accessionModalityDescription').type('CT');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(2);
expect($list).to.contain('CHEST');
expect($list.length).to.be.eq(1);
expect($list).to.contain('CT');
});
});
/*
/*
TODO: Currently broken in dicomweb-server
it('searches Accession with exact string', function() {
cy.get('@accessionModalityDescription').type('0000155811');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(1);
expect($list).to.contain('0000155811');
});
});
*/
/*
TODO: Currently broken in dicomweb-server
it('searches Description with exact string', function() {
cy.get('@accessionModalityDescription').type('PETCT');
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(1);
expect($list).to.contain('PETCT');
});
});
*/
it('changes Rows per page and checks the study count', function() {
//Show Rows per page options
const pageRows = [25, 50, 100];
@@ -3,12 +3,12 @@ describe('OHIF Study Viewer Page', function() {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(function() {
cy.initCommonElementsAliases();
cy.resetViewport();
cy.resetViewport().wait(50);
});
it('checks if series thumbnails are being displayed', function() {
@@ -50,10 +50,10 @@ describe('OHIF Study Viewer Page', function() {
.click();
// Click "Relabel"
cy.get('.btnAction')
cy.get('.btnAction', { timeout: 10000 })
.first()
.contains('Relabel')
.click();
.click().should('be.visible');
// Search for "Bone"
cy.get('.searchInput').type('Bone');
@@ -68,11 +68,20 @@ describe('OHIF Study Viewer Page', function() {
// Verify if 'Bone' label was added
cy.get('.measurementLocation').should('contain.text', 'Bone');
// Remove the measurement we just added
cy.get('.btnAction')
.last()
.contains('Delete')
.click()
// Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.be.enabled');
});
/*
TODO: Not sure why this is failing
it('checks if Description can be added to measurement item under Measurements panel', () => {
cy.addLengthMeasurement(); //Adding measurement in the viewport
cy.get('@measurementsBtn').click();
@@ -94,7 +103,19 @@ describe('OHIF Study Viewer Page', function() {
//Verify if descriptionText was added
cy.get('.measurementLocation').should('contain.text', descriptionText);
// Remove the measurement we just added
cy.get('.btnAction')
.last()
.contains('Delete')
.click()
// Close panel
cy.get('@measurementsBtn').click();
cy.get('@measurementsPanel').should('not.be.enabled');
});
*/
it('checks if measurement item can be deleted through the context menu on the viewport', function() {
cy.addLengthMeasurement([100, 100], [200, 100]); //Adding measurement in the viewport
@@ -108,6 +129,7 @@ describe('OHIF Study Viewer Page', function() {
.trigger('mouseup', x1, y1, {
which: 3,
})
.wait(300)
.then(() => {
//Contextmenu is visible
cy.get('.ToolContextMenu').should('be.visible');
@@ -122,12 +144,9 @@ describe('OHIF Study Viewer Page', function() {
cy.get('@measurementsBtn').click();
//Verify measurements was removed from panel
cy.get('.measurementItem');
// TODO: We need a seperate test server for this to work.
// As anyone can save measurements on a different slice.
// .should('not.exist')
// .log('Annotation removed with success');
cy.get('.measurementItem')
.should('not.exist')
.log('Annotation successfully removed');
//Close panel
cy.get('@measurementsBtn').click();
@@ -228,7 +247,7 @@ describe('OHIF Study Viewer Page', function() {
});
const expectedText =
'Ser: 5Img: 1 12/12512 x 512Loc: -15.40 mm Thick: 4.00 mm'; //'Img: 13 13/13';
'Ser: 2Img: 13 13/13512 x 512Loc: 18.40 mm Thick: 3.00 mm'; //'Img: 13 13/13';
cy.get('@viewportInfoBottomLeft').should('contains.text', expectedText);
});
@@ -246,7 +265,8 @@ describe('OHIF Study Viewer Page', function() {
.trigger('mousemove', 'center', { which: 3 })
.trigger('mouseup');
const expectedText = 'Zoom: 301%';
const expectedText = 'Zoom: 442%';
cy.get('@viewportInfoBottomRight').should('contains.text', expectedText);
});
@@ -301,6 +321,6 @@ describe('OHIF Study Viewer Page', function() {
//close modal
cy.get('[data-cy="close-button"]').click();
cy.get('@aboutOverlay').should('not.be.enabled');
cy.get('@aboutOverlay').should('not.exist');
});
});
@@ -184,7 +184,7 @@ describe('OHIF User Preferences', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
cy.initCommonElementsAliases();
// Check if application is in Spanish
@@ -217,7 +217,7 @@ describe('OHIF User Preferences', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -583,7 +583,7 @@ describe('OHIF User Preferences', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -1,9 +1,12 @@
/*
Temporarily disabling as we transition to containerized PACS for E2E tests
describe('OHIF HTML Extension', () => {
before(() => {
cy.openStudyInViewer(
'1.2.826.0.13854362241694438965858641723883466450351448'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
// TODO -> Commented these out until we get a seperate temporary PACS running on the CI.
@@ -79,3 +82,4 @@ describe('OHIF HTML Extension', () => {
// cy.screenshot('PDF Extension - Should load PDF file');
// });
// });
*/
@@ -1,3 +1,6 @@
/*
Temporarily disabling as we transition to containerized PACS for E2E tests
describe('OHIF Microscopy Extension', () => {
before(() => {
cy.openStudyModality('SM');
@@ -27,3 +30,4 @@ describe('OHIF Microscopy Extension', () => {
cy.screenshot('Microscopy Extension - Should display loaded canvas');
});
});
*/
@@ -3,10 +3,14 @@ describe('OHIF VTK Extension', () => {
cy.checkStudyRouteInViewer(
'1.3.6.1.4.1.25403.345050719074.3824.20170125113417.1'
);
cy.expectMinimumThumbnails(7);
cy.expectMinimumThumbnails(3);
// TODO: Added 1s wait because we are loading initial series list
// from QIDO-RS, which is breaking some cypress checks
//Waiting for the desired thumbnail content to be displayed
cy.get('[data-cy="thumbnail-list"]').should($list => {
cy.get('[data-cy="thumbnail-list"]').wait(1000).should($list => {
expect($list).to.contain('CT WB 5.0 B35f');
});
@@ -15,7 +19,7 @@ describe('OHIF VTK Extension', () => {
// has data from a drag-n-drop
// Drag and drop third thumbnail into first viewport
cy.get('[data-cy="thumbnail-list"]')
.contains('CT WB 5.0 B35f')
.eq(2)
.drag('.viewport-drop-target');
//Select 2D MPR button
@@ -3,7 +3,7 @@ describe('OHIF Save Measurements', function() {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -3,7 +3,7 @@ describe('Visual Regression - OHIF Cornerstone Hotkeys', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -3,7 +3,7 @@ describe('Visual Regression - OHIF Cornerstone Toolbar', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -13,7 +13,7 @@ describe('Visual Regression - OHIF Cornerstone Toolbar', () => {
});
it('checks if Pan tool will move the image inside the viewport', () => {
//Click on button and vefiry if icon is active on toolbar
//Click on button and verify if icon is active on toolbar
cy.get('@panBtn')
.click()
.then($panBtn => {
@@ -3,7 +3,7 @@ describe('Visual Regression - OHIF Download Snapshot File', () => {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -1,3 +1,6 @@
/*
Temporarily disabling as we transition to containerized PACS for E2E tests
describe('Visual Regression - OHIF Microscopy Extension', () => {
before(() => {
cy.openStudyModality('SM');
@@ -20,3 +23,4 @@ describe('Visual Regression - OHIF Microscopy Extension', () => {
);
});
});
*/
@@ -1,3 +1,6 @@
/*
Temporarily disabling as we transition to containerized PACS for E2E tests
describe('Visual Regression - OHIF PDF Extension', () => {
before(() => {
cy.checkStudyRouteInViewer(
@@ -20,3 +23,4 @@ describe('Visual Regression - OHIF PDF Extension', () => {
cy.percyCanvasSnapshot('PDF Extension - Should load PDF file');
});
});
*/
@@ -1,3 +1,6 @@
/*
Temporarily disabling as we transition to containerized PACS for E2E tests
describe('Visual Regression - OHIF VTK Extension', () => {
before(() => {
cy.checkStudyRouteInViewer(
@@ -91,3 +94,4 @@ describe('Visual Regression - OHIF VTK Extension', () => {
cy.percyCanvasSnapshot('VTK Rotate tool - Should rotate image');
});
});
*/
@@ -13,7 +13,7 @@ describe('Visual Regression - OHIF Routes', function() {
);
cy.server();
cy.route('GET', '**/ TESTStudy; /**').as('getTESTStudy');
cy.route('GET', '*TESTStudy; /**').as('getTESTStudy');
cy.wait('@getTESTStudy.all');
cy.get('@getTESTStudy').should($route => {
@@ -3,7 +3,7 @@ describe('Visual Regression - OHIF Study Viewer Page', function() {
cy.checkStudyRouteInViewer(
'1.2.840.113619.2.5.1762583153.215519.978957063.78'
);
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(function() {
@@ -31,6 +31,6 @@ describe('Visual Regression - OHIF Study Viewer Page', function() {
//close modal
cy.get('[data-cy="close-button"]').click();
cy.get('@aboutOverlay').should('not.be.enabled');
cy.get('@aboutOverlay').should('not.exist');
});
});
@@ -9,6 +9,11 @@ describe('Visual Regression - OHIF User Preferences', () => {
cy.openPreferences();
});
afterEach(() => {
// Close User Preferences modal
cy.closePreferences();
});
it('checks displayed information on User Preferences modal', function() {
// Go go hotkeys tab
cy.selectPreferencesTab('@userPreferencesHotkeysTab');
@@ -52,7 +57,7 @@ describe('Visual Regression - OHIF User Preferences', () => {
context('Study Viewer Page', function() {
before(() => {
cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
cy.expectMinimumThumbnails(5);
cy.expectMinimumThumbnails(3);
});
beforeEach(() => {
@@ -64,6 +69,11 @@ describe('Visual Regression - OHIF User Preferences', () => {
cy.openPreferences();
});
afterEach(() => {
// Close User Preferences modal
cy.closePreferences();
});
it('checks displayed information on User Preferences modal', function() {
// Go go hotkeys tab
cy.selectPreferencesTab('@userPreferencesHotkeysTab');
@@ -150,13 +160,13 @@ describe('Visual Regression - OHIF User Preferences', () => {
// Set new hotkey for 'Next Image Viewport' function
cy.setNewHotkeyShortcutOnUserPreferencesModal(
'Next Image Viewport',
'Next Viewport',
'{shift}{rightarrow}'
);
// Set new hotkey for 'Previous Image Viewport' function
cy.setNewHotkeyShortcutOnUserPreferencesModal(
'Previous Image Viewport',
'Previous Viewport',
'{shift}{leftarrow}'
);
+6 -4
View File
@@ -14,20 +14,22 @@ let percyHealthCheck = require('@percy/cypress/task');
module.exports = (on, config) => {
// `on` is used to hook into various events Cypress emits
// `config` is the resolved Cypress config
on('before:browser:launch', (browser = {}, args) => {
on('before:browser:launch', (browser = {}, launchOptions) => {
if (browser.name === 'chrome') {
// `args` is an araay of all the arguments
// that will be passed to Chrome when it launchers
args.push('--start-fullscreen');
launchOptions.args.push('--start-fullscreen');
// whatever you return here becomes the new args
return args;
return launchOptions;
}
if (browser.name === 'chromium') {
const newArgs = args.filter(arg => arg !== '--disable-gpu');
newArgs.push('--ignore-gpu-blacklist');
return newArgs;
launchOptions.args = newArgs;
return launchOptions;
}
});
Whitespace-only changes.
+24 -4
View File
@@ -149,10 +149,11 @@ Cypress.Commands.add('addLine', (viewport, firstClick, secondClick) => {
const [x1, y1] = firstClick;
const [x2, y2] = secondClick;
// TODO: Added a wait which appears necessary in Cornerstone Tools >4?
cy.wrap($viewport)
.click(x1, y1, { force: true })
.click(x1, y1).wait(100)
.trigger('mousemove', { clientX: x2, clientY: y2 })
.click(x2, y2, { force: true });
.click(x2, y2).wait(100);
});
});
@@ -242,6 +243,8 @@ Cypress.Commands.add('resetViewport', () => {
cy.get('[data-cy="reset"]')
.as('resetBtn')
.click();
cy.get('.tooltip-toolbar-overlay').should('not.exist');
});
Cypress.Commands.add('imageZoomIn', () => {
@@ -466,6 +469,24 @@ Cypress.Commands.add('openPreferences', () => {
});
});
Cypress.Commands.add('closePreferences', () => {
cy.log('Close User Preferences Modal');
cy.get('body').then(body => {
// Close notification if displayed
if (body.find('.sb-closeIcon').length > 0) {
cy.get('.sb-closeIcon')
.first()
.click({ force: true });
}
// Close User Preferences Modal (if displayed)
if (body.find('.OHIFModal__header').length > 0) {
cy.get('[data-cy="close-button"]').click({ force: true });
}
});
});
Cypress.Commands.add('selectPreferencesTab', tabAlias => {
cy.initPreferencesModalAliases();
cy.get(tabAlias)
@@ -527,8 +548,7 @@ Cypress.Commands.add(
.parent()
.find('input') // closest input to that label
.type(shortcut, { force: true }); // Set new shortcut for that function
})
.blur();
});
}
);
+7 -6
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/viewer",
"version": "4.5.28",
"version": "4.7.0",
"description": "OHIF Viewer",
"author": "OHIF Contributors",
"license": "MIT",
@@ -30,6 +30,7 @@
"start": "yarn run dev",
"test:e2e": "cypress open",
"test:e2e:ci": "percy exec -- cypress run --config video=false --record --browser chrome --spec 'cypress/integration/visual-regression/**/*'",
"test:e2e:script-tag": "cypress run --config video=false --browser chrome --spec 'cypress/integration/common/**/*,cypress/integration/script-tag/**/*'",
"test:e2e:local": "cypress run --config video=false --browser chrome --spec 'cypress/integration/common/**/*,cypress/integration/pwa/**/*'",
"test:e2e:dist": "start-server-and-test test:e2e:serve http://localhost:3000 test:e2e:ci",
"test:e2e:serve": "serve -n -l 3000 -s dist",
@@ -48,18 +49,18 @@
},
"dependencies": {
"@babel/runtime": "^7.5.5",
"@ohif/core": "^2.10.7",
"@ohif/core": "^2.11.1",
"@ohif/extension-cornerstone": "^2.9.6",
"@ohif/extension-debugging": "^0.1.6",
"@ohif/extension-dicom-html": "^1.2.9",
"@ohif/extension-dicom-microscopy": "^0.51.3",
"@ohif/extension-dicom-pdf": "^1.0.6",
"@ohif/extension-dicom-rt": "^0.4.9",
"@ohif/extension-dicom-rt": "^0.5.0",
"@ohif/extension-dicom-segmentation": "^0.4.7",
"@ohif/extension-lesion-tracker": "^0.2.1",
"@ohif/extension-vtk": "^1.8.0",
"@ohif/extension-vtk": "^1.9.3",
"@ohif/i18n": "^0.53.0",
"@ohif/ui": "^1.5.7",
"@ohif/ui": "^1.7.1",
"@tanem/react-nprogress": "^1.1.25",
"classnames": "^2.2.6",
"core-js": "^3.2.1",
@@ -92,7 +93,7 @@
"vtk.js": "^11.14.0"
},
"devDependencies": {
"cypress": "^3.8.0",
"cypress": "^6.0.0",
"gh-pages": "2.0.1",
"identity-obj-proxy": "3.0.x",
"lodash": "4.17.15",
@@ -0,0 +1,125 @@
window.config = {
routerBasename: '/',
extensions: [],
showStudyList: true,
servers: {
dicomWeb: [
{
name: 'dicomweb_server',
wadoUriRoot: 'http://localhost:5985',
qidoRoot: 'http://localhost:5985',
wadoRoot: 'http://localhost:5985',
qidoSupportsIncludeField: false,
imageRendering: 'wadouri',
thumbnailRendering: 'wadouri',
enableStudyLazyLoad: true,
},
],
},
// Extensions should be able to suggest default values for these?
// Or we can require that these be explicitly set
hotkeys: [
// ~ Global
{
commandName: 'incrementActiveViewport',
label: 'Next Viewport',
keys: ['right'],
},
{
commandName: 'decrementActiveViewport',
label: 'Previous Viewport',
keys: ['left'],
},
// Supported Keys: https://craig.is/killing/mice
// ~ Cornerstone Extension
{ commandName: 'rotateViewportCW', label: 'Rotate Right', keys: ['r'] },
{ commandName: 'rotateViewportCCW', label: 'Rotate Left', keys: ['l'] },
{ commandName: 'invertViewport', label: 'Invert', keys: ['i'] },
{
commandName: 'flipViewportVertical',
label: 'Flip Horizontally',
keys: ['h'],
},
{
commandName: 'flipViewportHorizontal',
label: 'Flip Vertically',
keys: ['v'],
},
{ commandName: 'scaleUpViewport', label: 'Zoom In', keys: ['+'] },
{ commandName: 'scaleDownViewport', label: 'Zoom Out', keys: ['-'] },
{ commandName: 'fitViewportToWindow', label: 'Zoom to Fit', keys: ['='] },
{ commandName: 'resetViewport', label: 'Reset', keys: ['space'] },
// clearAnnotations
{ commandName: 'nextImage', label: 'Next Image', keys: ['down'] },
{ commandName: 'previousImage', label: 'Previous Image', keys: ['up'] },
// firstImage
// lastImage
{
commandName: 'previousViewportDisplaySet',
label: 'Previous Series',
keys: ['pagedown'],
},
{
commandName: 'nextViewportDisplaySet',
label: 'Next Series',
keys: ['pageup'],
},
// ~ Cornerstone Tools
{ commandName: 'setZoomTool', label: 'Zoom', keys: ['z'] },
// ~ Window level presets
{
commandName: 'windowLevelPreset1',
label: 'W/L Preset 1',
keys: ['1'],
},
{
commandName: 'windowLevelPreset2',
label: 'W/L Preset 2',
keys: ['2'],
},
{
commandName: 'windowLevelPreset3',
label: 'W/L Preset 3',
keys: ['3'],
},
{
commandName: 'windowLevelPreset4',
label: 'W/L Preset 4',
keys: ['4'],
},
{
commandName: 'windowLevelPreset5',
label: 'W/L Preset 5',
keys: ['5'],
},
{
commandName: 'windowLevelPreset6',
label: 'W/L Preset 6',
keys: ['6'],
},
{
commandName: 'windowLevelPreset7',
label: 'W/L Preset 7',
keys: ['7'],
},
{
commandName: 'windowLevelPreset8',
label: 'W/L Preset 8',
keys: ['8'],
},
{
commandName: 'windowLevelPreset9',
label: 'W/L Preset 9',
keys: ['9'],
},
],
cornerstoneExtensionConfig: {},
// Following property limits number of simultaneous series metadata requests.
// For http/1.x-only servers, set this to 5 or less to improve
// on first meaningful display in viewer
// If the server is particularly slow to respond to series metadata
// requests as it extracts the metadata from raw files everytime,
// try setting this to even lower value
// Leave it undefined for no limit, sutiable for HTTP/2 enabled servers
// maxConcurrentMetadataRequests: 5,
};
+6 -7
View File
@@ -5,9 +5,8 @@ import { Route, Switch } from 'react-router-dom';
import { NProgress } from '@tanem/react-nprogress';
import { CSSTransition } from 'react-transition-group';
import { connect } from 'react-redux';
import { ViewerbaseDragDropContext, ErrorBoundary } from '@ohif/ui';
import { ViewerbaseDragDropContext, ErrorBoundary, asyncComponent, retryImport } from '@ohif/ui';
import { SignoutCallbackComponent } from 'redux-oidc';
import asyncComponent from './components/AsyncComponent.js';
import * as RoutesUtil from './routes/routesUtil';
import NotFound from './routes/NotFound.js';
@@ -18,7 +17,7 @@ import './theme-tide.css';
// Contexts
import AppContext from './context/AppContext';
const CallbackPage = asyncComponent(() =>
import(/* webpackChunkName: "CallbackPage" */ './routes/CallbackPage.js')
retryImport(() => import(/* webpackChunkName: "CallbackPage" */ './routes/CallbackPage.js'))
);
class OHIFStandaloneViewer extends Component {
@@ -203,10 +202,10 @@ class OHIFStandaloneViewer extends Component {
{match === null ? (
<></>
) : (
<ErrorBoundary context={match.url}>
<Component match={match} location={this.props.location} />
</ErrorBoundary>
)}
<ErrorBoundary context={match.url}>
<Component match={match} location={this.props.location} />
</ErrorBoundary>
)}
</CSSTransition>
)}
</Route>
@@ -1,37 +0,0 @@
/**
* We use this component to leverage "Code Splitting"
*
* Link: https://serverless-stack.com/chapters/code-splitting-in-create-react-app.html
*/
import React, { Component } from 'react';
export default function asyncComponent(importComponent) {
class AsyncComponent extends Component {
constructor(props) {
super(props);
this.state = {
component: null,
};
}
async componentDidMount() {
// Add dynamically loaded component to state
const { default: component } = await importComponent();
this.setState({
component: component,
});
}
render() {
const C = this.state.component;
// Render the loaded component, or null
return C ? <C {...this.props} /> : null;
}
}
return AsyncComponent;
}
@@ -83,6 +83,8 @@ class Viewer extends Component {
disassociate: this.disassociateStudy,
},
});
this._getActiveViewport = this._getActiveViewport.bind(this);
}
state = {
@@ -214,6 +216,10 @@ class Viewer extends Component {
}
}
_getActiveViewport() {
return this.props.viewports[this.props.activeViewportIndex];
}
render() {
let VisiblePanelLeft, VisiblePanelRight;
const panelExtensions = extensionManager.modules[MODULE_TYPES.PANEL];
@@ -314,11 +320,11 @@ class Viewer extends Component {
activeIndex={this.props.activeViewportIndex}
/>
) : (
<ConnectedStudyBrowser
studies={this.state.thumbnails}
studyMetadata={this.props.studies}
/>
)}
<ConnectedStudyBrowser
studies={this.state.thumbnails}
studyMetadata={this.props.studies}
/>
)}
</SidePanel>
</ErrorBoundaryDialog>
@@ -341,6 +347,8 @@ class Viewer extends Component {
viewports={this.props.viewports}
studies={this.props.studies}
activeIndex={this.props.activeViewportIndex}
activeViewport={this.props.viewports[this.props.activeViewportIndex]}
getActiveViewport={this._getActiveViewport}
/>
)}
</SidePanel>
@@ -363,7 +371,7 @@ export default withDialog(Viewer);
* @param {Study[]} studies
* @param {DisplaySet[]} studies[].displaySets
*/
const _mapStudiesToThumbnails = function(studies) {
const _mapStudiesToThumbnails = function (studies) {
return studies.map(study => {
const { StudyInstanceUID } = study;
+11 -11
View File
@@ -1,32 +1,32 @@
import asyncComponent from '../components/AsyncComponent.js';
import { asyncComponent, retryImport } from '@ohif/ui';
import OHIF from '@ohif/core';
const { urlUtil: UrlUtil } = OHIF.utils;
// Dynamic Import Routes (CodeSplitting)
const IHEInvokeImageDisplay = asyncComponent(() =>
import(
/* webpackChunkName: "IHEInvokeImageDisplay" */ './IHEInvokeImageDisplay.js'
retryImport(() =>
import(/* webpackChunkName: "IHEInvokeImageDisplay" */ './IHEInvokeImageDisplay.js')
)
);
const ViewerRouting = asyncComponent(() =>
import(/* webpackChunkName: "ViewerRouting" */ './ViewerRouting.js')
retryImport(() => import(/* webpackChunkName: "ViewerRouting" */ './ViewerRouting.js'))
);
const StudyListRouting = asyncComponent(() =>
import(
retryImport(() => import(
/* webpackChunkName: "StudyListRouting" */ '../studylist/StudyListRouting.js'
)
))
);
const StandaloneRouting = asyncComponent(() =>
import(
retryImport(() => import(
/* webpackChunkName: "ConnectedStandaloneRouting" */ '../connectedComponents/ConnectedStandaloneRouting.js'
)
))
);
const ViewerLocalFileData = asyncComponent(() =>
import(
retryImport(() => import(
/* webpackChunkName: "ViewerLocalFileData" */ '../connectedComponents/ViewerLocalFileData.js'
)
))
);
const reload = () => window.location.reload();
+357 -246
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