chore(release): publish [skip ci]

- @ohif/extension-dicom-segmentation@0.7.17
 - @ohif/extension-vtk@1.12.40
 - @ohif/core@2.16.34
 - @ohif/viewer@4.12.46

extensions/dicom-segmentation/CHANGELOG.md

@@ -3,6 +3,17 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [0.7.17](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.16...@ohif/extension-dicom-segmentation@0.7.17) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
 ## [0.7.16](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.15...@ohif/extension-dicom-segmentation@0.7.16) (2022-10-28)
 
 

extensions/dicom-segmentation/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-dicom-segmentation",
-  "version": "0.7.16",
+  "version": "0.7.17",
   "description": "OHIF extension for viewing segmentations in the 2D MPR view",
   "author": "OHIF",
   "license": "MIT",

extensions/dicom-segmentation/src/index.js

@@ -36,9 +36,9 @@ export default {
         const message =
           error.message.includes('orthogonal') ||
           error.message.includes('oblique')
-            ? 'The segmentation has been detected as not planar,\
-    If you really think it is planar,\
-    please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+            ? 'The segmentation has been detected as non coplanar,\
+              If you really think it is coplanar,\
+              please adjust the tolerance in the segmentation panel settings (at your own peril!)'
             : error.message;
         LoggerService.error({ error, message });
         UINotificationService.show({

extensions/vtk/CHANGELOG.md

@@ -3,6 +3,30 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [1.12.40](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.39...@ohif/extension-vtk@1.12.40) (2022-12-12)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.39](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.38...@ohif/extension-vtk@1.12.39) (2022-11-12)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.38](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.37...@ohif/extension-vtk@1.12.38) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
 ## [1.12.37](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.36...@ohif/extension-vtk@1.12.37) (2022-10-28)
 
 **Note:** Version bump only for package @ohif/extension-vtk

extensions/vtk/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-vtk",
-  "version": "1.12.37",
+  "version": "1.12.40",
   "description": "OHIF extension for VTK.js",
   "author": "OHIF",
   "license": "MIT",
@@ -53,7 +53,7 @@
     "react-vtkjs-viewport": "^0.14.5"
   },
   "devDependencies": {
-    "@ohif/core": "^2.16.31",
+    "@ohif/core": "^2.16.34",
     "@ohif/ui": "^1.10.10",
     "cornerstone-tools": "^6.0.6",
     "cornerstone-wado-image-loader": "^4.2.1",

platform/core/CHANGELOG.md

@@ -3,6 +3,36 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [2.16.34](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.33...@ohif/core@2.16.34) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
+## [2.16.33](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.32...@ohif/core@2.16.33) (2022-11-12)
+
+
+### Bug Fixes
+
+* handle missing ReferencedInstanceSequence attribute ([#2786](https://github.com/OHIF/Viewers/issues/2786)) ([4473807](https://github.com/OHIF/Viewers/commit/44738078dbd8dc6b27d2d669e25417e37371f48d))
+
+
+
+
+
+## [2.16.32](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.31...@ohif/core@2.16.32) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/core
+
+
+
+
+
 ## [2.16.31](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.30...@ohif/core@2.16.31) (2022-10-28)
 
 

platform/core/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/core",
-  "version": "2.16.31",
+  "version": "2.16.34",
   "description": "Generic business logic for web-based medical imaging applications",
   "author": "OHIF Core Team",
   "license": "MIT",

platform/core/src/DICOMSR/SCOORD3D/parseSCOORD3D.js

@@ -1,6 +1,5 @@
 import { ImageSet } from '../../classes';
 import getMeasurements from './utils/getMeasurements';
-import getReferencedImagesList from './utils/getReferencedImagesList';
 import isRehydratable from './utils/isRehydratable';
 import addMeasurement from './utils/addMeasurement';
 
@@ -27,7 +26,6 @@ const parseSCOORD3D = ({ servicesManager, displaySets }) => {
 
     const { ContentSequence } = firstInstance;
 
-    srDisplaySet.referencedImages = getReferencedImagesList(ContentSequence);
     srDisplaySet.measurements = getMeasurements(ContentSequence);
     const mappings = MeasurementService.getSourceMappings(
       'CornerstoneTools',

platform/core/src/DICOMSR/SCOORD3D/utils/getReferencedImagesList.js

@@ -1,47 +0,0 @@
-import getSequenceAsArray from './getSequenceAsArray';
-import { CodeNameCodeSequenceValues } from '../enums';
-
-const getReferencedImagesList = ImagingMeasurementReportContentSequence => {
-  const referencedImages = [];
-
-  const ImageLibrary = ImagingMeasurementReportContentSequence.find(
-    item =>
-      item.ConceptNameCodeSequence.CodeValue ===
-      CodeNameCodeSequenceValues.ImageLibrary
-  );
-
-  if (!ImageLibrary || !ImageLibrary.ContentSequence) {
-    return referencedImages;
-  }
-
-  const ImageLibraryGroup = getSequenceAsArray(
-    ImageLibrary.ContentSequence
-  ).find(
-    item =>
-      item.ConceptNameCodeSequence.CodeValue ===
-      CodeNameCodeSequenceValues.ImageLibraryGroup
-  );
-
-  if (!ImageLibraryGroup || !ImageLibraryGroup.ContentSequence) {
-    return referencedImages;
-  }
-
-  getSequenceAsArray(ImageLibraryGroup.ContentSequence).forEach(item => {
-    const { ReferencedSOPSequence } = item;
-    if (ReferencedSOPSequence) {
-      const {
-        ReferencedSOPClassUID,
-        ReferencedSOPInstanceUID,
-      } = ReferencedSOPSequence;
-
-      referencedImages.push({
-        ReferencedSOPClassUID,
-        ReferencedSOPInstanceUID,
-      });
-    }
-  });
-
-  return referencedImages;
-};
-
-export default getReferencedImagesList;

platform/core/src/studies/services/wado/getReferencedSeriesSequence.js

@@ -21,16 +21,18 @@ const getReferencedSeriesSequence = instance => {
       const referencedInstanceSequenceRaw = referencedSeries['0008114A'];
       const referencedInstanceSequence = [];
 
-      referencedInstanceSequenceRaw.Value.forEach(referencedInstance => {
-        referencedInstanceSequence.push({
-          referencedSOPClassUID: DICOMWeb.getString(
-            referencedInstance['00081150']
-          ),
-          referencedSOPInstanceUID: DICOMWeb.getString(
-            referencedInstance['00081155']
-          ),
+      if (referencedInstanceSequenceRaw) {
+        referencedInstanceSequenceRaw.Value.forEach(referencedInstance => {
+          referencedInstanceSequence.push({
+            referencedSOPClassUID: DICOMWeb.getString(
+              referencedInstance['00081150']
+            ),
+            referencedSOPInstanceUID: DICOMWeb.getString(
+              referencedInstance['00081155']
+            ),
+          });
         });
-      });
+      }
 
       referencedSeriesSequence.push({
         referencedSeriesInstanceUID,

platform/core/src/utils/loadAndCacheDerivedDisplaySets.js

@@ -122,9 +122,9 @@ async function loadAndCacheDerivedDisplaySets(
               const message =
                 error.message.includes('orthogonal') ||
                 error.message.includes('oblique')
-                  ? 'The segmentation has been detected as not planar,\
-          If you really think it is planar,\
-          please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+                  ? 'The segmentation has been detected as non coplanar,\
+                    If you really think it is coplanar,\
+                    please adjust the tolerance in the segmentation panel settings (at your own peril!)'
                   : error.message;
 
               logger.error({ error, message });

platform/viewer/CHANGELOG.md

@@ -3,6 +3,33 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [4.12.46](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.45...@ohif/viewer@4.12.46) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
+## [4.12.45](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.44...@ohif/viewer@4.12.45) (2022-11-12)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.44](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.43...@ohif/viewer@4.12.44) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
 ## [4.12.43](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.42...@ohif/viewer@4.12.43) (2022-10-28)
 
 

platform/viewer/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/viewer",
-  "version": "4.12.43",
+  "version": "4.12.46",
   "description": "OHIF Viewer",
   "author": "OHIF Contributors",
   "license": "MIT",
@@ -47,16 +47,16 @@
   },
   "dependencies": {
     "@babel/runtime": "^7.5.5",
-    "@ohif/core": "^2.16.31",
+    "@ohif/core": "^2.16.34",
     "@ohif/extension-cornerstone": "^2.12.15",
     "@ohif/extension-debugging": "^0.3.3",
     "@ohif/extension-dicom-html": "^1.3.23",
     "@ohif/extension-dicom-microscopy": "^0.52.0",
     "@ohif/extension-dicom-pdf": "^1.1.2",
     "@ohif/extension-dicom-rt": "^0.7.13",
-    "@ohif/extension-dicom-segmentation": "^0.7.16",
+    "@ohif/extension-dicom-segmentation": "^0.7.17",
     "@ohif/extension-lesion-tracker": "^0.2.2",
-    "@ohif/extension-vtk": "^1.12.37",
+    "@ohif/extension-vtk": "^1.12.40",
     "@ohif/i18n": "^0.53.0",
     "@ohif/ui": "^1.10.10",
     "@tanem/react-nprogress": "^1.1.25",

platform/viewer/src/connectedComponents/ConnectedStudyBrowser.js

@@ -23,9 +23,9 @@ const mapDispatchToProps = (dispatch, ownProps) => {
             const message =
               error.message.includes('orthogonal') ||
               error.message.includes('oblique')
-                ? 'The segmentation has been detected as not planar,\
-          If you really think it is planar,\
-          please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+                ? 'The segmentation has been detected as non coplanar,\
+                If you really think it is coplanar,\
+                please adjust the tolerance in the segmentation panel settings (at your own peril!)'
                 : error.message;
 
             LoggerService.error({ error, message });

platform/viewer/src/connectedComponents/ViewerMain.js

@@ -148,9 +148,9 @@ class ViewerMain extends Component {
           const message =
             error.message.includes('orthogonal') ||
             error.message.includes('oblique')
-              ? 'The segmentation has been detected as not planar,\
-      If you really think it is planar,\
-      please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+              ? 'The segmentation has been detected as non coplanar,\
+              If you really think it is coplanar,\
+              please adjust the tolerance in the segmentation panel settings (at your own peril!)'
               : error.message;
           LoggerService.error({ error, message });
           UINotificationService.show({