chore(release): publish [skip ci]

- @ohif/extension-dicom-segmentation@0.7.21
 - @ohif/viewer@4.12.50

.github/ISSUE_TEMPLATE/---bug-report.md

@@ -2,23 +2,21 @@
 name: "\U0001F41B Bug report"
 about: Create a report to help us improve
 title: ''
-labels: 'Community: Report :bug:, Awaiting Reproduction, Triage :white_flag:'
+labels: 'Community: Report :bug:, Awaiting Reproduction'
 assignees: ''
 ---
 
-> **Before Creating an issue**
->
-> - Are you running the latest version?
-> - Are you reporting to the correct repository?
-> - Did you search existing issues?
-
-## Bug Report
+<!-- ⚠️⚠️ Do Not Delete This! bug_report_template ⚠️⚠️ -->
+<!-- Please read our Rules of Conduct: https://github.com/OHIF/Viewers/blob/master/CODE_OF_CONDUCT.md -->
+<!-- 🕮 Read our guide about our process: https://v3-docs.ohif.org/development/our-process -->
+<!-- 🔎 Search existing issues to avoid creating duplicates. -->
+<!-- 🧪 Test using the latest version -->
 
 ### Describe the Bug
 
 _A clear and concise description of what the bug is._
 
-### What steps can we follow to reproduce the bug?
+### Steps to Reproduce:
 
 1. First step
 2. Second step
@@ -28,6 +26,15 @@ _A clear and concise description of what the bug is._
 Please use code blocks to show formatted errors or code snippets
 ```
 
+### The current behavior
+
+_A clear and concise description of what happens instead of the expected
+behavior._
+
+### The expected behavior
+
+_A clear and concise description of what you expected to happen._
+
 > :warning: Reports we cannot reproduce are at risk of being marked stale and
 > closed. The more information you can provide, the more likely we are to look
 > into and address your issue.

.github/ISSUE_TEMPLATE/---feature-request.md

@@ -2,19 +2,28 @@
 name: "\U0001F680 Feature request"
 about: Suggest an idea for this project
 title: ''
-labels: 'Community: Request :hand:, Triage :white_flag:'
+labels: 'Community: Request :hand:'
 assignees: ''
 ---
 
-> :hand: Many people requests features. Tell us why yours is important to the
+<!-- ⚠️⚠️ Do Not Delete This! feature_request_template ⚠️⚠️ -->
+<!-- Please read our Rules of Conduct: https://github.com/OHIF/Viewers/blob/master/CODE_OF_CONDUCT.md -->
+
+<!-- :hand: Many people requests features. Tell us why yours is important to the
 > community. How does it add value? Why _this feature_?
 >
 > Is your request very specific to your needs? Consider
-> [contributing it](https://docs.ohif.org/contributing.html) yourself! Or reach
-> out to a community member that offers
+> [contributing it](https://v3-docs.ohif.org/development/contributing) yourself!
+> Or reach out to a community member that offers
 > [consulting services](https://docs.ohif.org/help.html#paid--commercial).
+-->
 
-## Request
+### Request
+
+<!--
+Please include as much detail as possible including possibly mock up screen shots, workflow or logic flow diagrams etc.
+Discuss if and how the requested feature interacts with existing features
+-->
 
 **What feature or change would you like to see made?**
 

.github/pull_request_template.md

@@ -1,14 +1,91 @@
-### PR Checklist
-
-- [ ] Brief description of changes
-- [ ] Links to any relevant issues
-- [ ] Required status checks are passing
-- [ ] User cases if changes impact the user's experience
-- [ ] `@mention` a maintainer to request a review
+<!-- Do Not Delete This! pr_template -->
+<!-- Please read our Rules of Conduct: https://github.com/OHIF/Viewers/blob/master/CODE_OF_CONDUCT.md -->
+<!-- 🕮 Read our guide about our Contributing Guide here https://v3-docs.ohif.org/development/contributing -->
+<!-- :hand: Thank you for starting this amazing contribution! -->
 
 <!--
-  Links
-  -->
+⚠️⚠️ Please make sure the checklist section below is complete before submitting your PR.
+To complete the checklist, add an 'x' to each item: [] -> [x]
+(PRs that do not have all the checkboxes marked will not be approved)
+-->
+
+### Context
+
+<!--
+Provide a clear explanation of the reasoning behind this change, such as:
+- A link to the issue being addressed, using the format "Fixes #ISSUE_NUMBER"
+- An image showing the issue or problem being addressed (if not already in the issue)
+- Error logs or callStacks to help with the understanding of the problem (if not already in the issue)
+-->
+
+### Changes & Results
+
+<!--
+List all the changes that have been done, such as:
+- Add new components
+- Remove old components
+- Update dependencies
+
+What are the effects of this change?
+- Before vs After
+- Screenshots / GIFs / Videos
+-->
+
+### Testing
+
+<!--
+Describe how we can test your changes.
+- open a URL
+- visit a page
+- click on a button
+- etc.
+-->
+
+### Checklist
+
+#### PR
+
+<!--
+https://semantic-release.gitbook.io/semantic-release/#how-does-it-work
+
+Examples:
+Please note the letter casing in the provided examples (upper or lower).
+
+- feat(MeasurementService): add ...
+- fix(Toolbar): fix ...
+- docs(Readme): update ...
+- style(Whitespace): fix ...
+- refactor(ExtensionManager): ...
+- test(HangingProtocol): Add test ...
+- chore(git): update ...
+- perf(VolumeLoader): ...
+
+You don't need to have each commit within the Pull Request follow the rule,
+but the PR title must comply with it, as it will be used as the commit message
+after the commits are squashed.
+-->
+
+- [] My Pull Request title is descriptive, accurate and follows the
+  semantic-release format and guidelines.
+
+#### Code
+
+- [] My code has been well-documented (function documentation, inline comments,
+  etc.)
+
+#### Public Documentation Updates
+
+<!-- https://v3-docs.ohif.org/ -->
+
+- [] The documentation page has been updated as necessary for any public API
+  additions or removals.
+
+#### Tested Environment
+
+- [] "OS: <!--[e.g. Windows 10, macOS 10.15.4]"-->
+- [] "Node version: <!--[e.g. 16.14.0]"-->
+- [] "Browser:
+  <!--[e.g. Chrome 83.0.4103.116, Firefox 77.0.1, Safari 13.1.1]"-->
 
 <!-- prettier-ignore-start -->
 [blog]: https://circleci.com/blog/triggering-trusted-ci-jobs-on-untrusted-forks/

.github/stale.yml

@@ -4,23 +4,17 @@
 # Number of days of inactivity before an issue becomes stale
 daysUntilStale: 180
 # Number of days of inactivity before a stale issue is closed
-daysUntilClose: 9000
+daysUntilClose: 60
 # Issues with these labels will never be considered stale
 exemptLabels:
-  - 'Story :raised_hands:'
   - 'Bug: Verified :bug:'
-  - 'Task: CI/Tooling :robot:'
-  - 'Task: Docs 📖'
-  - 'Task: Docs :book:'
-  - 'Task: Refactor :hammer_and_wrench:'
-  - 'Task: Tests :microscope:'
   - 'PR: Awaiting Review 👀'
-  - 'Triage :white_flag:'
-  - 'Extension: Discussion'
   - 'Announcement 🎉'
   - 'IDC:priority'
   - 'IDC:candidate'
   - 'IDC:collaboration'
+  - 'Community: Request :hand:'
+  - 'Community: Report :bug:'
 # Label to use when marking an issue as stale
 staleLabel: 'Stale :baguette_bread:'
 # Comment to post when marking an issue as stale. Set to `false` to disable

extensions/cornerstone/CHANGELOG.md

@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [2.12.16](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.12.15...@ohif/extension-cornerstone@2.12.16) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
 ## [2.12.15](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.12.14...@ohif/extension-cornerstone@2.12.15) (2022-09-20)
 
 **Note:** Version bump only for package @ohif/extension-cornerstone

extensions/cornerstone/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-cornerstone",
-  "version": "2.12.15",
+  "version": "2.12.16",
   "description": "OHIF extension for Cornerstone",
   "author": "OHIF",
   "license": "MIT",
@@ -36,7 +36,7 @@
     "cornerstone-math": "^0.1.9",
     "cornerstone-tools": "^6.0.6",
     "cornerstone-wado-image-loader": "^4.2.1",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "dicom-parser": "^1.8.11",
     "hammerjs": "^2.0.8",
     "prop-types": "^15.6.2",

extensions/dicom-html/CHANGELOG.md

@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [1.3.24](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.3.23...@ohif/extension-dicom-html@1.3.24) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
 ## [1.3.23](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.3.22...@ohif/extension-dicom-html@1.3.23) (2022-09-01)
 
 **Note:** Version bump only for package @ohif/extension-dicom-html

extensions/dicom-html/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-dicom-html",
-  "version": "1.3.23",
+  "version": "1.3.24",
   "description": "OHIF extension for rendering structured reports to HTML",
   "author": "OHIF",
   "license": "MIT",
@@ -29,7 +29,7 @@
   },
   "peerDependencies": {
     "@ohif/core": "^0.50.0",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "prop-types": "^15.6.2",
     "react": "^16.8.6",
     "react-dom": "^16.8.6"

extensions/dicom-rt/CHANGELOG.md

@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [0.7.14](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.7.13...@ohif/extension-dicom-rt@0.7.14) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-dicom-rt
+
+
+
+
+
 ## [0.7.13](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.7.12...@ohif/extension-dicom-rt@0.7.13) (2022-09-01)
 
 **Note:** Version bump only for package @ohif/extension-dicom-rt

extensions/dicom-rt/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-dicom-rt",
-  "version": "0.7.13",
+  "version": "0.7.14",
   "description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
   "author": "OHIF",
   "license": "MIT",
@@ -31,7 +31,7 @@
     "@ohif/core": "^0.50.0",
     "cornerstone-core": "^2.6.1",
     "cornerstone-tools": "^6.0.6",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "gl-matrix": "^3.3.0",
     "prop-types": "^15.6.2",
     "react": "^16.8.6",

extensions/dicom-segmentation/CHANGELOG.md

@@ -3,6 +3,60 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [0.7.21](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.20...@ohif/extension-dicom-segmentation@0.7.21) (2023-01-17)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+## [0.7.20](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.19...@ohif/extension-dicom-segmentation@0.7.20) (2023-01-10)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+## [0.7.19](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.18...@ohif/extension-dicom-segmentation@0.7.19) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+## [0.7.18](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.17...@ohif/extension-dicom-segmentation@0.7.18) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+## [0.7.17](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.16...@ohif/extension-dicom-segmentation@0.7.17) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
+## [0.7.16](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.15...@ohif/extension-dicom-segmentation@0.7.16) (2022-10-28)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Update message for segmentation error loading due to orientation tolerance ([#2982](https://github.com/OHIF/Viewers/issues/2982)) ([545161d](https://github.com/OHIF/Viewers/commit/545161d5e8d92bb6652f17dc24a36dac8aa7b3a4))
+
+
+
+
+
 ## [0.7.15](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.7.14...@ohif/extension-dicom-segmentation@0.7.15) (2022-09-19)
 
 **Note:** Version bump only for package @ohif/extension-dicom-segmentation

extensions/dicom-segmentation/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-dicom-segmentation",
-  "version": "0.7.15",
+  "version": "0.7.21",
   "description": "OHIF extension for viewing segmentations in the 2D MPR view",
   "author": "OHIF",
   "license": "MIT",
@@ -31,7 +31,7 @@
     "@ohif/core": "^0.50.0",
     "cornerstone-core": "^2.6.1",
     "cornerstone-tools": "^6.0.6",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "prop-types": "^15.6.2",
     "react": "^16.8.6",
     "react-dom": "^16.8.6"

extensions/dicom-segmentation/src/commandsModule.js

@@ -0,0 +1,100 @@
+import csTools from 'cornerstone-tools';
+import cs from 'cornerstone-core';
+import OHIF from '@ohif/core';
+
+import DICOMSegTempCrosshairsTool from './tools/DICOMSegTempCrosshairsTool';
+import refreshViewports from './utils/refreshViewports';
+
+const { studyMetadataManager } = OHIF.utils;
+
+const commandsModule = ({ commandsManager }) => {
+  const actions = {
+    jumpToFirstSegment: ({ viewports }) => {
+      try {
+        const { activeViewportIndex, viewportSpecificData } = viewports;
+        const viewport = viewportSpecificData[activeViewportIndex];
+        const { StudyInstanceUID, displaySetInstanceUID } = viewport;
+        const studyMetadata = studyMetadataManager.get(StudyInstanceUID);
+        const firstImageId = studyMetadata.getFirstImageId(
+          displaySetInstanceUID
+        );
+
+        const module = csTools.getModule('segmentation');
+        const brushStackState = module.state.series[firstImageId];
+        const { labelmaps3D, activeLabelmapIndex } = brushStackState;
+        const { labelmaps2D } = labelmaps3D[activeLabelmapIndex];
+
+        const firstLabelMap2D = labelmaps2D.find(value => !!value);
+        const firstSegment = firstLabelMap2D.segmentsOnLabelmap[0];
+        const segmentNumber = firstSegment;
+
+        const validIndexList = [];
+        labelmaps2D.forEach((labelMap2D, index) => {
+          if (labelMap2D.segmentsOnLabelmap.includes(segmentNumber)) {
+            validIndexList.push(index);
+          }
+        });
+
+        const avg = array => array.reduce((a, b) => a + b) / array.length;
+        const average = avg(validIndexList);
+        const closest = validIndexList.reduce((prev, curr) => {
+          return Math.abs(curr - average) < Math.abs(prev - average)
+            ? curr
+            : prev;
+        });
+
+        const enabledElements = cs.getEnabledElements();
+        const element = enabledElements[activeViewportIndex].element;
+
+        const toolState = csTools.getToolState(element, 'stack');
+        if (!toolState) return;
+
+        const imageIds = toolState.data[0].imageIds;
+        const imageId = imageIds[closest];
+        const frameIndex = imageIds.indexOf(imageId);
+        const SOPInstanceUID = cs.metaData.get('SOPInstanceUID', imageId);
+
+        cs.getEnabledElements().forEach(enabledElement => {
+          cs.updateImage(enabledElement.element);
+        });
+
+        DICOMSegTempCrosshairsTool.addCrosshair(
+          element,
+          imageId,
+          segmentNumber
+        );
+
+        cs.getEnabledElements().forEach(enabledElement => {
+          cs.updateImage(enabledElement.element);
+        });
+
+        const refreshViewports = false;
+
+        commandsManager.runCommand('jumpToImage', {
+          StudyInstanceUID,
+          SOPInstanceUID,
+          frameIndex,
+          activeViewportIndex,
+          refreshViewports,
+        });
+      } catch (error) {
+        console.log('Error in moving to the first segment slice');
+      }
+    },
+  };
+
+  const definitions = {
+    jumpToFirstSegment: {
+      commandFn: actions.jumpToFirstSegment,
+      storeContexts: ['viewports'],
+      options: {},
+    },
+  };
+
+  return {
+    definitions,
+    defaultContext: 'VIEWER',
+  };
+};
+
+export default commandsModule;

extensions/dicom-segmentation/src/components/SegmentItem/SegmentItem.css

@@ -62,8 +62,8 @@
 }
 
 .dcmseg-segment-item .segment-label span {
-  overflow-wrap: normal;
-  white-space: nowrap;
+  overflow-wrap: break-word;
+  white-space: normal;
   overflow: hidden;
   max-width: calc(100% - 40px); /* calc(100% - 50px); 20px = eye icon */
   text-overflow: ellipsis;
@@ -71,6 +71,7 @@
 
 .dcmseg-segment-item .segment-label .eye-icon {
   cursor: pointer;
+  min-width: 20px;
   color: var(--active-color);
 }
 

extensions/dicom-segmentation/src/components/SegmentationPanel/SegmentationPanel.js

@@ -630,25 +630,17 @@ const SegmentationPanel = ({
 
   const onVisibilityChangeHandler = isVisible => {
     let segmentsHidden = [];
+    const labelmap3D = getActiveLabelMaps3D();
+
     state.segmentNumbers.forEach(segmentNumber => {
       if (isVTK()) {
         onSegmentVisibilityChange(segmentNumber, isVisible);
       }
 
-      /** Get all labelmaps with this segmentNumber (overlapping segments) */
-      const { labelmaps3D } = getBrushStackState();
-      const possibleLabelMaps3D = labelmaps3D.filter(({ labelmaps2D }) => {
-        return labelmaps2D.some(({ segmentsOnLabelmap }) =>
-          segmentsOnLabelmap.includes(segmentNumber)
-        );
-      });
-
-      possibleLabelMaps3D.forEach(labelmap3D => {
-        labelmap3D.segmentsHidden[segmentNumber] = !isVisible;
-        segmentsHidden = [
-          ...new Set([...segmentsHidden, ...labelmap3D.segmentsHidden]),
-        ];
-      });
+      labelmap3D.segmentsHidden[segmentNumber] = !isVisible;
+      segmentsHidden = [
+        ...new Set([...segmentsHidden, ...labelmap3D.segmentsHidden]),
+      ];
     });
 
     setState(state => ({ ...state, segmentsHidden }));

extensions/dicom-segmentation/src/components/SegmentationSettings/SegmentationSettings.js

@@ -29,6 +29,32 @@ const SegmentationSettings = ({ configuration, onBack, onChange, servicesManager
     setState(state => ({ ...state, [field]: value }));
   };
 
+  const once = fn => (...args) => {
+    if (!fn) return;
+    fn(...args);
+    fn = null;
+  };
+
+  const segTolValue = document.getElementById('segToleranceValue');
+  if (segTolValue) {
+    segTolValue.onchange = once(function() {
+      const { UINotificationService, LoggerService } = servicesManager.services;
+
+      const error = new Error(
+        'Segmentation loader tolerance changed.\
+        This operation can potentially generate errors in the Segmentation parsing.'
+      );
+
+      LoggerService.error({ error, message: error.message });
+      UINotificationService.show({
+        title: 'Segmentation panel',
+        message: error.message,
+        type: 'warning',
+        autoClose: true,
+      });
+  });
+}
+
   const toFloat = value => parseFloat(value / 100).toFixed(2);
 
   return (
@@ -138,32 +164,23 @@ const SegmentationSettings = ({ configuration, onBack, onChange, servicesManager
         <label style={{ margin: '0 15px' }}>
           Tolerance:
           <input
+            id="segToleranceValue"
             style={{ margin: '0 15px' }}
             label="Tolerance"
             onKeyPress={event => {
-              const validate = string => {
-                let rgx = /[^-.e0-9]+/g;
-                return string.match(rgx);
-              };
+                const validate = string => {
+                  let rgx = /[^-.e0-9]+/g;
+                  return string.match(rgx);
+                };
 
-              if (validate(event.key)) {
-                event.preventDefault();
-              }
-            }}
-            onChange={event => {
-              save('segsTolerance', event.target.value);
-
-              const { UINotificationService, LoggerService } = servicesManager.services;
-              const error = new Error('Segmentation loader tolerance changed. This operation can potentially generate errors in the Segmentation parsing.');
-              LoggerService.error({ error, message: error.message });
-              UINotificationService.show({
-                title: 'Segmentation panel',
-                message: error.message,
-                type: 'warning',
-                autoClose: true,
-              });
+                if (validate(event.key)) {
+                  event.preventDefault();
+                }
               }
             }
+            onChange={event => {
+              save('segsTolerance', event.target.value);
+            }}
             value={state.segsTolerance}
           />
         </label>

extensions/dicom-segmentation/src/index.js

@@ -6,6 +6,7 @@ import toolbarModule from './toolbarModule.js';
 import getSopClassHandlerModule from './getOHIFDicomSegSopClassHandler.js';
 import SegmentationPanel from './components/SegmentationPanel/SegmentationPanel.js';
 import { version } from '../package.json';
+import commandsModule from './commandsModule.js';
 const { studyMetadataManager } = OHIF.utils;
 
 export default {
@@ -33,10 +34,17 @@ export default {
     const ExtendedSegmentationPanel = props => {
       const { activeContexts } = api.hooks.useAppContext();
       const onDisplaySetLoadFailureHandler = error => {
-        LoggerService.error({ error, message: error.message });
+        const message =
+          error.message.includes('orthogonal') ||
+          error.message.includes('oblique')
+            ? 'The segmentation has been detected as non coplanar,\
+              If you really think it is coplanar,\
+              please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+            : error.message;
+        LoggerService.error({ error, message });
         UINotificationService.show({
           title: 'DICOM Segmentation Loader',
-          message: error.message,
+          message,
           type: 'error',
           autoClose: false,
         });
@@ -114,6 +122,15 @@ export default {
       });
     };
 
+    const onSegmentationsCompletelyLoaded = () => {
+      commandsManager.runCommand('jumpToFirstSegment');
+    };
+
+    document.addEventListener(
+      'segseriesselected',
+      onSegmentationsCompletelyLoaded
+    );
+
     document.addEventListener(
       'extensiondicomsegmentationsegloaded',
       onSegmentationsLoaded
@@ -175,5 +192,8 @@ export default {
       defaultContext: ['VIEWER'],
     };
   },
+  getCommandsModule({ commandsManager, servicesManager }) {
+    return commandsModule({ commandsManager, servicesManager });
+  },
   getSopClassHandlerModule,
 };

extensions/dicom-tag-browser/CHANGELOG.md

@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [0.2.25](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.2.24...@ohif/extension-dicom-tag-browser@0.2.25) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-dicom-tag-browser
+
+
+
+
+
 ## [0.2.24](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.2.23...@ohif/extension-dicom-tag-browser@0.2.24) (2022-09-01)
 
 **Note:** Version bump only for package @ohif/extension-dicom-tag-browser

extensions/dicom-tag-browser/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-dicom-tag-browser",
-  "version": "0.2.24",
+  "version": "0.2.25",
   "description": "OHIF extension for checking DICOM headers.",
   "author": "OHIF",
   "license": "MIT",
@@ -28,7 +28,7 @@
   },
   "peerDependencies": {
     "@ohif/core": "^2.6.0",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "react": "^16.8.6"
   },
   "dependencies": {

extensions/vtk/CHANGELOG.md

@@ -3,6 +3,62 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [1.12.41](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.40...@ohif/extension-vtk@1.12.41) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.40](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.39...@ohif/extension-vtk@1.12.40) (2022-12-12)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.39](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.38...@ohif/extension-vtk@1.12.39) (2022-11-12)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.38](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.37...@ohif/extension-vtk@1.12.38) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.37](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.36...@ohif/extension-vtk@1.12.37) (2022-10-28)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.36](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.35...@ohif/extension-vtk@1.12.36) (2022-10-25)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.12.35](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.34...@ohif/extension-vtk@1.12.35) (2022-09-26)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
 ## [1.12.34](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.12.33...@ohif/extension-vtk@1.12.34) (2022-09-20)
 
 **Note:** Version bump only for package @ohif/extension-vtk

extensions/vtk/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/extension-vtk",
-  "version": "1.12.34",
+  "version": "1.12.41",
   "description": "OHIF extension for VTK.js",
   "author": "OHIF",
   "license": "MIT",
@@ -35,7 +35,7 @@
     "cornerstone-core": "^2.6.1",
     "cornerstone-tools": "^6.0.6",
     "cornerstone-wado-image-loader": "^4.2.1",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "dicom-parser": "^1.8.11",
     "i18next": "^17.0.3",
     "i18next-browser-languagedetector": "^3.0.1",
@@ -50,10 +50,10 @@
   "dependencies": {
     "@babel/runtime": "^7.5.5",
     "lodash.throttle": "^4.1.1",
-    "react-vtkjs-viewport": "^0.14.4"
+    "react-vtkjs-viewport": "^0.14.5"
   },
   "devDependencies": {
-    "@ohif/core": "^2.16.29",
+    "@ohif/core": "^2.16.35",
     "@ohif/ui": "^1.10.10",
     "cornerstone-tools": "^6.0.6",
     "cornerstone-wado-image-loader": "^4.2.1",

platform/core/CHANGELOG.md

@@ -3,6 +3,66 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [2.16.35](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.34...@ohif/core@2.16.35) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/core
+
+
+
+
+
+## [2.16.34](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.33...@ohif/core@2.16.34) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
+## [2.16.33](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.32...@ohif/core@2.16.33) (2022-11-12)
+
+
+### Bug Fixes
+
+* handle missing ReferencedInstanceSequence attribute ([#2786](https://github.com/OHIF/Viewers/issues/2786)) ([4473807](https://github.com/OHIF/Viewers/commit/44738078dbd8dc6b27d2d669e25417e37371f48d))
+
+
+
+
+
+## [2.16.32](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.31...@ohif/core@2.16.32) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/core
+
+
+
+
+
+## [2.16.31](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.30...@ohif/core@2.16.31) (2022-10-28)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Update message for segmentation error loading due to orientation tolerance ([#2982](https://github.com/OHIF/Viewers/issues/2982)) ([545161d](https://github.com/OHIF/Viewers/commit/545161d5e8d92bb6652f17dc24a36dac8aa7b3a4))
+
+
+
+
+
+## [2.16.30](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.29...@ohif/core@2.16.30) (2022-10-25)
+
+
+### Bug Fixes
+
+* 2965 Correct Parsing Logic for Qualitative Instance Level SR ([#2972](https://github.com/OHIF/Viewers/issues/2972)) ([f7db74a](https://github.com/OHIF/Viewers/commit/f7db74a84376598065b6fa2c00cd5735415ff651))
+
+
+
+
+
 ## [2.16.29](https://github.com/OHIF/Viewers/compare/@ohif/core@2.16.28...@ohif/core@2.16.29) (2022-09-20)
 
 **Note:** Version bump only for package @ohif/core

platform/core/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/core",
-  "version": "2.16.29",
+  "version": "2.16.35",
   "description": "Generic business logic for web-based medical imaging applications",
   "author": "OHIF Core Team",
   "license": "MIT",
@@ -39,7 +39,7 @@
   "dependencies": {
     "@babel/runtime": "^7.5.5",
     "ajv": "^6.10.0",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "dicomweb-client": "^0.8.3",
     "immer": "9.0.12",
     "isomorphic-base64": "^1.0.2",

platform/core/src/DICOMSR/SCOORD3D/parseSCOORD3D.js

@@ -1,6 +1,5 @@
 import { ImageSet } from '../../classes';
 import getMeasurements from './utils/getMeasurements';
-import getReferencedImagesList from './utils/getReferencedImagesList';
 import isRehydratable from './utils/isRehydratable';
 import addMeasurement from './utils/addMeasurement';
 
@@ -27,7 +26,6 @@ const parseSCOORD3D = ({ servicesManager, displaySets }) => {
 
     const { ContentSequence } = firstInstance;
 
-    srDisplaySet.referencedImages = getReferencedImagesList(ContentSequence);
     srDisplaySet.measurements = getMeasurements(ContentSequence);
     const mappings = MeasurementService.getSourceMappings(
       'CornerstoneTools',

platform/core/src/DICOMSR/SCOORD3D/utils/getReferencedImagesList.js

@@ -1,51 +0,0 @@
-import getSequenceAsArray from './getSequenceAsArray';
-import { CodeNameCodeSequenceValues } from '../enums';
-
-const getReferencedImagesList = ImagingMeasurementReportContentSequence => {
-  const referencedImages = [];
-
-  const ImageLibrary = ImagingMeasurementReportContentSequence.find(
-    item =>
-      item.ConceptNameCodeSequence.CodeValue ===
-        CodeNameCodeSequenceValues.ImageLibrary ||
-      item.ConceptNameCodeSequence.CodeValue ===
-        CodeNameCodeSequenceValues.ImagingMeasurements
-  );
-
-  if (!ImageLibrary || !ImageLibrary.ContentSequence) {
-    return referencedImages;
-  }
-
-  const ImageLibraryGroup = getSequenceAsArray(
-    ImageLibrary.ContentSequence
-  ).find(
-    item =>
-      item.ConceptNameCodeSequence.CodeValue ===
-        CodeNameCodeSequenceValues.ImageLibraryGroup ||
-      item.ConceptNameCodeSequence.CodeValue ===
-        CodeNameCodeSequenceValues.MeasurementGroup
-  );
-
-  if (!ImageLibraryGroup || !ImageLibraryGroup.ContentSequence) {
-    return referencedImages;
-  }
-
-  getSequenceAsArray(ImageLibraryGroup.ContentSequence).forEach(item => {
-    const { ReferencedSOPSequence } = item;
-    if (ReferencedSOPSequence) {
-      const {
-        ReferencedSOPClassUID,
-        ReferencedSOPInstanceUID,
-      } = ReferencedSOPSequence;
-
-      referencedImages.push({
-        ReferencedSOPClassUID,
-        ReferencedSOPInstanceUID,
-      });
-    }
-  });
-
-  return referencedImages;
-};
-
-export default getReferencedImagesList;

platform/core/src/studies/services/wado/getReferencedSeriesSequence.js

@@ -21,16 +21,18 @@ const getReferencedSeriesSequence = instance => {
       const referencedInstanceSequenceRaw = referencedSeries['0008114A'];
       const referencedInstanceSequence = [];
 
-      referencedInstanceSequenceRaw.Value.forEach(referencedInstance => {
-        referencedInstanceSequence.push({
-          referencedSOPClassUID: DICOMWeb.getString(
-            referencedInstance['00081150']
-          ),
-          referencedSOPInstanceUID: DICOMWeb.getString(
-            referencedInstance['00081155']
-          ),
+      if (referencedInstanceSequenceRaw) {
+        referencedInstanceSequenceRaw.Value.forEach(referencedInstance => {
+          referencedInstanceSequence.push({
+            referencedSOPClassUID: DICOMWeb.getString(
+              referencedInstance['00081150']
+            ),
+            referencedSOPInstanceUID: DICOMWeb.getString(
+              referencedInstance['00081155']
+            ),
+          });
         });
-      });
+      }
 
       referencedSeriesSequence.push({
         referencedSeriesInstanceUID,

platform/core/src/utils/loadAndCacheDerivedDisplaySets.js

@@ -119,10 +119,18 @@ async function loadAndCacheDerivedDisplaySets(
         ) {
           if (recentDisplaySet.Modality === 'SEG' && logger) {
             const onDisplaySetLoadFailureHandler = error => {
-              logger.error({ error, message: error.message });
+              const message =
+                error.message.includes('orthogonal') ||
+                error.message.includes('oblique')
+                  ? 'The segmentation has been detected as non coplanar,\
+                    If you really think it is coplanar,\
+                    please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+                  : error.message;
+
+              logger.error({ error, message });
               snackbar.show({
                 title: 'DICOM Segmentation Loader',
-                message: error.message,
+                message,
                 type: 'error',
                 autoClose: false,
               });

platform/viewer/CHANGELOG.md

@@ -3,6 +3,92 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [4.12.50](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.49...@ohif/viewer@4.12.50) (2023-01-17)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.49](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.48...@ohif/viewer@4.12.49) (2023-01-10)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.48](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.47...@ohif/viewer@4.12.48) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.47](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.46...@ohif/viewer@4.12.47) (2022-12-21)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.46](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.45...@ohif/viewer@4.12.46) (2022-12-12)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Reword message for segmentation error loading due to orientation tolerance ([#3017](https://github.com/OHIF/Viewers/issues/3017)) ([597ac11](https://github.com/OHIF/Viewers/commit/597ac11c4daee1b1e14148804551e20611cfef08))
+
+
+
+
+
+## [4.12.45](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.44...@ohif/viewer@4.12.45) (2022-11-12)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.44](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.43...@ohif/viewer@4.12.44) (2022-11-02)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.43](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.42...@ohif/viewer@4.12.43) (2022-10-28)
+
+
+### Bug Fixes
+
+* [#2964](https://github.com/OHIF/Viewers/issues/2964) Update message for segmentation error loading due to orientation tolerance ([#2982](https://github.com/OHIF/Viewers/issues/2982)) ([545161d](https://github.com/OHIF/Viewers/commit/545161d5e8d92bb6652f17dc24a36dac8aa7b3a4))
+
+
+
+
+
+## [4.12.42](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.41...@ohif/viewer@4.12.42) (2022-10-25)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.12.41](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.40...@ohif/viewer@4.12.41) (2022-09-26)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
 ## [4.12.40](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.12.39...@ohif/viewer@4.12.40) (2022-09-20)
 
 **Note:** Version bump only for package @ohif/viewer

platform/viewer/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@ohif/viewer",
-  "version": "4.12.40",
+  "version": "4.12.50",
   "description": "OHIF Viewer",
   "author": "OHIF Contributors",
   "license": "MIT",
@@ -47,16 +47,16 @@
   },
   "dependencies": {
     "@babel/runtime": "^7.5.5",
-    "@ohif/core": "^2.16.29",
-    "@ohif/extension-cornerstone": "^2.12.15",
+    "@ohif/core": "^2.16.35",
+    "@ohif/extension-cornerstone": "^2.12.16",
     "@ohif/extension-debugging": "^0.3.3",
-    "@ohif/extension-dicom-html": "^1.3.23",
+    "@ohif/extension-dicom-html": "^1.3.24",
     "@ohif/extension-dicom-microscopy": "^0.52.0",
     "@ohif/extension-dicom-pdf": "^1.1.2",
-    "@ohif/extension-dicom-rt": "^0.7.13",
-    "@ohif/extension-dicom-segmentation": "^0.7.15",
+    "@ohif/extension-dicom-rt": "^0.7.14",
+    "@ohif/extension-dicom-segmentation": "^0.7.21",
     "@ohif/extension-lesion-tracker": "^0.2.2",
-    "@ohif/extension-vtk": "^1.12.34",
+    "@ohif/extension-vtk": "^1.12.41",
     "@ohif/i18n": "^0.53.0",
     "@ohif/ui": "^1.10.10",
     "@tanem/react-nprogress": "^1.1.25",
@@ -66,7 +66,7 @@
     "cornerstone-math": "^0.1.9",
     "cornerstone-tools": "^6.0.6",
     "cornerstone-wado-image-loader": "^4.2.1",
-    "dcmjs": "0.24.10",
+    "dcmjs": "0.29.3",
     "dicom-parser": "^1.8.11",
     "dicomweb-client": "^0.8.3",
     "hammerjs": "^2.0.8",

platform/viewer/src/connectedComponents/ConnectedStudyBrowser.js

@@ -20,10 +20,18 @@ const mapDispatchToProps = (dispatch, ownProps) => {
         const { Modality } = displaySet;
         if (Modality === 'SEG' && servicesManager) {
           const onDisplaySetLoadFailureHandler = error => {
-            LoggerService.error({ error, message: error.message });
+            const message =
+              error.message.includes('orthogonal') ||
+              error.message.includes('oblique')
+                ? 'The segmentation has been detected as non coplanar,\
+                If you really think it is coplanar,\
+                please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+                : error.message;
+
+            LoggerService.error({ error, message });
             UINotificationService.show({
               title: 'DICOM Segmentation Loader',
-              message: error.message,
+              message,
               type: 'error',
               autoClose: false,
             });
@@ -46,7 +54,9 @@ const mapDispatchToProps = (dispatch, ownProps) => {
                 detail: { activatedLabelmapIndex: activatedLabelmapIndex },
               }
             );
+            const segThumbnailSelected = new CustomEvent('segseriesselected');
             document.dispatchEvent(selectionFired);
+            document.dispatchEvent(segThumbnailSelected);
           });
         } else if (Modality !== 'SR') {
           displaySet = displaySet.getSourceDisplaySet(ownProps.studyMetadata);

platform/viewer/src/connectedComponents/Viewer.js

@@ -505,14 +505,14 @@ const _checkForDerivedDisplaySets = async function(displaySet, study) {
  * @returns {[string]} an array of strings containing the warnings
  */
 const _checkForSeriesInconsistencesWarnings = async function(displaySet) {
-  if (displaySet.inconsistencyWarnings) {
-    // warnings already checked and cached in displaySet
-    return displaySet.inconsistencyWarnings;
-  }
-
   const inconsistencyWarnings = [];
 
   if (displaySet.Modality !== 'SEG') {
+    // warnings already checked and cached in displaySet
+    if (displaySet.inconsistencyWarnings) {
+      return displaySet.inconsistencyWarnings;
+    }
+
     if (
       displaySet.reconstructionIssues &&
       displaySet.reconstructionIssues.length !== 0

platform/viewer/src/connectedComponents/ViewerMain.js

@@ -145,10 +145,17 @@ class ViewerMain extends Component {
       const { Modality } = displaySet;
       if (Modality === 'SEG' && servicesManager) {
         const onDisplaySetLoadFailureHandler = error => {
-          LoggerService.error({ error, message: error.message });
+          const message =
+            error.message.includes('orthogonal') ||
+            error.message.includes('oblique')
+              ? 'The segmentation has been detected as non coplanar,\
+              If you really think it is coplanar,\
+              please adjust the tolerance in the segmentation panel settings (at your own peril!)'
+              : error.message;
+          LoggerService.error({ error, message });
           UINotificationService.show({
             title: 'DICOM Segmentation Loader',
-            message: error.message,
+            message,
             type: 'error',
             autoClose: false,
           });

runtime.txt

@@ -1 +1 @@
-3.7
+3.8

yarn.lock

@@ -4242,13 +4242,13 @@ capture-exit@^2.0.0:
     rsvp "^4.8.4"
 
 cardboard-vr-display@^1.0.15:
-  version "1.0.16"
-  resolved "https://registry.yarnpkg.com/cardboard-vr-display/-/cardboard-vr-display-1.0.16.tgz#f91e2798e8fb70a348599638c6742c72dfeadabc"
-  integrity sha512-GFBWPMH/ixy4Ji014BAO1ryddGHphtJlA8gUR6UdKsOpPjUQukCKpgsx2XIJ5oBlqXnDQOcLVRqBWyuvTI32jQ==
+  version "1.0.19"
+  resolved "https://registry.yarnpkg.com/cardboard-vr-display/-/cardboard-vr-display-1.0.19.tgz#81dcde1804b329b8228b757ac00e1fd2afa9d748"
+  integrity sha512-+MjcnWKAkb95p68elqZLDPzoiF/dGncQilLGvPBM5ZorABp/ao3lCs7nnRcYBckmuNkg1V/5rdGDKoUaCVsHzQ==
   dependencies:
     gl-preserve-state "^1.0.0"
     nosleep.js "^0.7.0"
-    webvr-polyfill-dpdb "^1.0.11"
+    webvr-polyfill-dpdb "^1.0.17"
 
 cardinal@^2.1.1:
   version "2.1.1"
@@ -5637,16 +5637,17 @@ dateformat@^3.0.0:
   resolved "https://registry.yarnpkg.com/dateformat/-/dateformat-3.0.3.tgz#a6e37499a4d9a9cf85ef5872044d62901c9889ae"
   integrity sha512-jyCETtSl3VMZMWeRo7iY1FL19ges1t55hMo5yaam4Jrsm5EPL89UQkoQRyiI+Yf4k8r2ZpdngkV8hr1lIdjb3Q==
 
-dcmjs@0.24.10:
-  version "0.24.10"
-  resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.24.10.tgz#048a12a1905175763274545c17bb38b506cdfd00"
-  integrity sha512-kugEdBqwwTx7lqUxm4jdklkMJiQ8pZ0aqMw9WkszkDU5lDWHyq2kbRccACtcwqygC7j1d36w8uG/vNLMejeMBg==
+dcmjs@0.29.3:
+  version "0.29.3"
+  resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.29.3.tgz#e672ed079bd5371406e022361c60d7794af40d7b"
+  integrity sha512-aLAkrpejrFAatzU84ID9s01+oUFBzIP3gSkgyr2OcDfOphW7ms/JUDUdH24Y6361NaMovEo4gJ3bRrzsBmI8cA==
   dependencies:
     "@babel/runtime-corejs2" "^7.17.8"
     gl-matrix "^3.1.0"
     lodash.clonedeep "^4.5.0"
     loglevelnext "^3.0.1"
     ndarray "^1.0.19"
+    pako "^2.0.4"
 
 debug@2.6.9, debug@^2.2.0, debug@^2.3.3, debug@^2.6.8, debug@^2.6.9:
   version "2.6.9"
@@ -11208,7 +11209,7 @@ normalize-url@^3.0.0, normalize-url@^3.3.0:
 nosleep.js@^0.7.0:
   version "0.7.0"
   resolved "https://registry.yarnpkg.com/nosleep.js/-/nosleep.js-0.7.0.tgz#cfd919c25523ca0d0f4a69fb3305c083adaee289"
-  integrity sha1-z9kZwlUjyg0PSmn7MwXAg62u4ok=
+  integrity sha512-Z4B1HgvzR+en62ghwZf6BwAR6x4/pjezsiMcbF9KMLh7xoscpoYhaSXfY3lLkqC68AtW+/qLJ1lzvBIj0FGaTA==
 
 npm-bundled@^1.0.1:
   version "1.0.6"
@@ -13519,10 +13520,10 @@ react-transition-group@^4.1.1:
     loose-envify "^1.4.0"
     prop-types "^15.6.2"
 
-react-vtkjs-viewport@^0.14.4:
-  version "0.14.4"
-  resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.14.4.tgz#8cc5a49738fff3fee75ead61c98307bc24710151"
-  integrity sha512-WKU87iqH6AQ1R8zp1hUXU4hsGwfbkkoUhzSCjbBGZ9Di0ELYNx/xY9DtdmgsKOU5Y5Arp5+VQW/ziFsq2KTcTA==
+react-vtkjs-viewport@^0.14.5:
+  version "0.14.5"
+  resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.14.5.tgz#95cda594370e557d43aa966392ed92926e6c53c1"
+  integrity sha512-DE+Ytub6veya3DTvItJdZhkTR8MppoLkrq57qhN9vd2meykeS1fZp9cDyWmq92dJ7IHSuS5FPof8ucsae9ci5w==
   dependencies:
     date-fns "^2.2.1"
     gl-matrix "^3.1.0"
@@ -14499,7 +14500,7 @@ scriptjs@^2.5.9:
 seedrandom@2.4.3:
   version "2.4.3"
   resolved "https://registry.yarnpkg.com/seedrandom/-/seedrandom-2.4.3.tgz#2438504dad33917314bff18ac4d794f16d6aaecc"
-  integrity sha1-JDhQTa0zkXMUv/GKxNeU8W1qrsw=
+  integrity sha512-2CkZ9Wn2dS4mMUWQaXLsOAfGD+irMlLEeSP3cMxpGbgyOOzJGFa+MWCOMTOCMyZinHRPxyOj/S/C57li/1to6Q==
 
 seedrandom@^3.0.5:
   version "3.0.5"
@@ -14715,7 +14716,7 @@ shebang-regex@^3.0.0:
 shelljs@0.7.8:
   version "0.7.8"
   resolved "https://registry.yarnpkg.com/shelljs/-/shelljs-0.7.8.tgz#decbcf874b0d1e5fb72e14b164a9683048e9acb3"
-  integrity sha1-3svPh0sNHl+3LhSxZKloMEjprLM=
+  integrity sha512-/YF5Uk8hcwi7ima04ppkbA4RaRMdPMBfwAvAf8sufYOxsJRtbdoBsT8vGvlb+799BrlGdYrd+oczIA2eN2JdWA==
   dependencies:
     glob "^7.0.0"
     interpret "^1.0.0"
@@ -16662,10 +16663,10 @@ websocket-extensions@>=0.1.1:
   resolved "https://registry.yarnpkg.com/websocket-extensions/-/websocket-extensions-0.1.3.tgz#5d2ff22977003ec687a4b87073dfbbac146ccf29"
   integrity sha512-nqHUnMXmBzT0w570r2JpJxfiSD1IzoI+HGVdd3aZ0yNi3ngvQ4jv1dtHt5VGxfI2yj5yqImPhOK4vmIh2xMbGg==
 
-webvr-polyfill-dpdb@^1.0.11:
-  version "1.0.16"
-  resolved "https://registry.yarnpkg.com/webvr-polyfill-dpdb/-/webvr-polyfill-dpdb-1.0.16.tgz#7f2cf88460c002a5f10ff69b2bf3a5663e0ad9dd"
-  integrity sha512-FCciTtPhwkYYHGL0K67G8k7ZnNVqnEx3u4NVHLJ0+Ya6f2VTZUl/GJpaEo1Id2pBP/2l0RYZ3IGZE4Pe8fRalg==
+webvr-polyfill-dpdb@^1.0.17:
+  version "1.0.18"
+  resolved "https://registry.yarnpkg.com/webvr-polyfill-dpdb/-/webvr-polyfill-dpdb-1.0.18.tgz#258484ce06b057bf18898acc911bd173847bce11"
+  integrity sha512-O0S1ZGEWyPvyZEkS2VbyV7mtir/NM9MNK3EuhbHPoJ8EHTky2pTXehjIl+IiDPr+Lldgx129QGt3NGly7rwRPw==
 
 webvr-polyfill@0.10.8:
   version "0.10.8"