Compare commits
6
Commits
| Author | SHA1 | Date | |
|---|---|---|---|
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fc40d84092 | ||
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709f14708e | ||
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5f4c4ab5e7 | ||
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71205618ec | ||
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5014ba864b | ||
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e96205de35 |
No files matched your search
@@ -11,6 +11,14 @@ are:
|
||||
```js
|
||||
window.config = {
|
||||
routerBasename: '/',
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||||
/**
|
||||
* "White Labeling" is used to change the branding, look, and feel of the OHIF
|
||||
* Viewer. These settings, and the color variables that are used by our components,
|
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* are the easiest way to rebrand the application.
|
||||
*
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* More extensive changes are made possible through swapping out the UI library,
|
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* Viewer project, or extensions.
|
||||
*/
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whiteLabeling: {
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/* Optional: Should return a React component to be rendered in the "Logo" section of the application's Top Navigation bar */
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||||
createLogoComponentFn: function(React) {
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@@ -30,6 +38,32 @@ window.config = {
|
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});
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},
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},
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/**
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* Internally, the OHIF Viewer fetches data primarily with the
|
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* `cornerstoneWADOImageLoader` and the `DICOMWebClient`. If either of these
|
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* receive a non-200 response, this method allows you to handle that error.
|
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*
|
||||
* Common use cases include:
|
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* - Showing a notification with the UINotificationService
|
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* - Redirecting the user
|
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* - Refreshing an auth token
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*
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* @param {Object} error - JS new Error()
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* @param {XMLHttpRequest} error.request - The XHR request that's onreadystate change triggered this callback
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* @param {string} error.response - The XHR's response property
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* @param {number} error.status - The XHR's status property
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*/
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httpErrorHandler: error => {
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const { request: xhr, response, status } = err;
|
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const { responseType, statusText } = xhr;
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||||
|
||||
// In local files, status is 0 upon success in Firefox
|
||||
if (xhr.readyState === XMLHttpRequest.DONE) {
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console.log(statusText, response, responseType);
|
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} else {
|
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console.warn('Likely CORS error');
|
||||
}
|
||||
},
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||||
extensions: [],
|
||||
showStudyList: true,
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filterQueryParam: false,
|
||||
|
||||
@@ -3,6 +3,28 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [2.6.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.6.0...@ohif/extension-cornerstone@2.6.1) (2020-04-23)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Multiframe fix ([#1661](https://github.com/OHIF/Viewers/issues/1661)) ([7120561](https://github.com/OHIF/Viewers/commit/71205618ecb8b592247c5acb32284bfe7e18fce5))
|
||||
|
||||
|
||||
|
||||
|
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|
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# [2.6.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.5.2...@ohif/extension-cornerstone@2.6.0) (2020-04-23)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* configuration to hook into XHR Error handling ([e96205d](https://github.com/OHIF/Viewers/commit/e96205de35e5bec14dc8a9a8509db3dd4e6ecdb6))
|
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|
||||
|
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|
||||
|
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||||
## [2.5.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.5.1...@ohif/extension-cornerstone@2.5.2) (2020-04-09)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-cornerstone
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-cornerstone",
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||||
"version": "2.5.2",
|
||||
"version": "2.6.1",
|
||||
"description": "OHIF extension for Cornerstone",
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||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -35,7 +35,7 @@
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-math": "^0.1.8",
|
||||
"cornerstone-tools": "4.12.5",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "^0.10.1",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"hammerjs": "^2.0.8",
|
||||
|
||||
@@ -2,6 +2,9 @@ import Hammer from 'hammerjs';
|
||||
import cornerstone from 'cornerstone-core';
|
||||
import cornerstoneMath from 'cornerstone-math';
|
||||
import cornerstoneTools from 'cornerstone-tools';
|
||||
import OHIF from '@ohif/core';
|
||||
|
||||
const { log } = OHIF;
|
||||
|
||||
export default function(configuration = {}) {
|
||||
// For debugging
|
||||
@@ -12,6 +15,13 @@ export default function(configuration = {}) {
|
||||
cornerstoneTools.external.cornerstoneMath = cornerstoneMath;
|
||||
cornerstoneTools.init(configuration);
|
||||
|
||||
cornerstoneTools.loadHandlerManager.setErrorLoadingHandler(
|
||||
(element, imageId, error) => {
|
||||
log.error(imageId);
|
||||
throw error;
|
||||
}
|
||||
);
|
||||
|
||||
// Set the tool font and font size
|
||||
// context.font = "[style] [variant] [weight] [size]/[line height] [font family]";
|
||||
const fontFamily =
|
||||
|
||||
@@ -3,6 +3,17 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
# [0.1.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-p10-downloader@0.0.2...@ohif/extension-dicom-p10-downloader@0.1.0) (2020-04-23)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* configuration to hook into XHR Error handling ([e96205d](https://github.com/OHIF/Viewers/commit/e96205de35e5bec14dc8a9a8509db3dd4e6ecdb6))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## 0.0.2 (2020-04-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-p10-downloader
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-p10-downloader",
|
||||
"version": "0.0.2",
|
||||
"version": "0.1.0",
|
||||
"description": "OHIF extension for downloading DICOM P10 files",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -33,6 +33,7 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"dicomweb-client": "^0.6.0",
|
||||
"file-saver": "^2.0.2",
|
||||
"jszip": "^3.2.2"
|
||||
}
|
||||
|
||||
@@ -3,6 +3,25 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.4.0...@ohif/extension-vtk@1.4.1) (2020-04-23)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.3.14...@ohif/extension-vtk@1.4.0) (2020-04-23)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* configuration to hook into XHR Error handling ([e96205d](https://github.com/OHIF/Viewers/commit/e96205de35e5bec14dc8a9a8509db3dd4e6ecdb6))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.14](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.3.13...@ohif/extension-vtk@1.3.14) (2020-04-22)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-vtk",
|
||||
"version": "1.3.14",
|
||||
"version": "1.4.1",
|
||||
"description": "OHIF extension for VTK.js",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -34,7 +34,7 @@
|
||||
"@ohif/ui": "^0.50.0",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.12.5",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "^0.10.1",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"i18next": "^17.0.3",
|
||||
@@ -53,10 +53,10 @@
|
||||
"react-vtkjs-viewport": "^0.8.3"
|
||||
},
|
||||
"devDependencies": {
|
||||
"@ohif/core": "^2.7.1",
|
||||
"@ohif/core": "^2.8.1",
|
||||
"@ohif/ui": "^1.4.3",
|
||||
"cornerstone-tools": "4.12.5",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"gh-pages": "^2.0.1",
|
||||
"i18next": "^17.0.3",
|
||||
|
||||
@@ -3,6 +3,28 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [2.8.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.8.0...@ohif/core@2.8.1) (2020-04-23)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Multiframe fix ([#1661](https://github.com/OHIF/Viewers/issues/1661)) ([7120561](https://github.com/OHIF/Viewers/commit/71205618ecb8b592247c5acb32284bfe7e18fce5))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [2.8.0](https://github.com/OHIF/Viewers/compare/@ohif/core@2.7.1...@ohif/core@2.8.0) (2020-04-23)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* configuration to hook into XHR Error handling ([e96205d](https://github.com/OHIF/Viewers/commit/e96205de35e5bec14dc8a9a8509db3dd4e6ecdb6))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.7.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.7.0...@ohif/core@2.7.1) (2020-04-22)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/core",
|
||||
"version": "2.7.1",
|
||||
"version": "2.8.1",
|
||||
"description": "Generic business logic for web-based medical imaging applications",
|
||||
"author": "OHIF Core Team",
|
||||
"license": "MIT",
|
||||
@@ -33,14 +33,14 @@
|
||||
"peerDependencies": {
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.12.5",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dicom-parser": "^1.8.3"
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"ajv": "^6.10.0",
|
||||
"dcmjs": "^0.12.0",
|
||||
"dicomweb-client": "^0.5.2",
|
||||
"dicomweb-client": "^0.6.0",
|
||||
"immer": "6.0.2",
|
||||
"isomorphic-base64": "^1.0.2",
|
||||
"lodash.clonedeep": "^4.5.0",
|
||||
|
||||
@@ -5,6 +5,7 @@ import DICOMWeb from '../DICOMWeb';
|
||||
import parseDicomStructuredReport from './parseDicomStructuredReport';
|
||||
import parseMeasurementsData from './parseMeasurementsData';
|
||||
import getAllDisplaySets from './utils/getAllDisplaySets';
|
||||
import errorHandler from '../errorHandler';
|
||||
|
||||
const VERSION_NAME = 'dcmjs-0.0';
|
||||
const TRANSFER_SYNTAX_UID = '1.2.840.10008.1.2.1';
|
||||
@@ -21,6 +22,7 @@ const retrieveMeasurementFromSR = async (series, studies, serverUrl) => {
|
||||
const config = {
|
||||
url: serverUrl,
|
||||
headers: DICOMWeb.getAuthorizationHeader(),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
@@ -71,6 +73,7 @@ const stowSRFromMeasurements = async (measurements, serverUrl) => {
|
||||
const config = {
|
||||
url: serverUrl,
|
||||
headers: DICOMWeb.getAuthorizationHeader(),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
|
||||
@@ -11,6 +11,7 @@ import { api } from 'dicomweb-client';
|
||||
import { isImage } from '../../utils/isImage';
|
||||
import isDisplaySetReconstructable from '../../utils/isDisplaySetReconstructable';
|
||||
import isLowPriorityModality from '../../utils/isLowPriorityModality';
|
||||
import errorHandler from '../../errorHandler';
|
||||
|
||||
export class StudyMetadata extends Metadata {
|
||||
constructor(data, uid) {
|
||||
@@ -102,10 +103,7 @@ export class StudyMetadata extends Metadata {
|
||||
* @param {SeriesMetadata} series The series metadata object from which the display sets will be created
|
||||
* @returns {Array} The list of display sets created for the given series object
|
||||
*/
|
||||
_createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series,
|
||||
) {
|
||||
_createDisplaySetsForSeries(sopClassHandlerModules, series) {
|
||||
const study = this;
|
||||
const displaySets = [];
|
||||
|
||||
@@ -293,14 +291,13 @@ export class StudyMetadata extends Metadata {
|
||||
}
|
||||
|
||||
// Loop through the series (SeriesMetadata)
|
||||
this.forEachSeries(
|
||||
series => {
|
||||
const displaySetsForSeries = this._createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series,
|
||||
);
|
||||
this.forEachSeries(series => {
|
||||
const displaySetsForSeries = this._createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series
|
||||
);
|
||||
|
||||
displaySets.push(...displaySetsForSeries);
|
||||
displaySets.push(...displaySetsForSeries);
|
||||
});
|
||||
|
||||
return sortDisplaySetList(displaySets);
|
||||
@@ -321,7 +318,10 @@ export class StudyMetadata extends Metadata {
|
||||
return false;
|
||||
}
|
||||
|
||||
const displaySets = this._createDisplaySetsForSeries(sopClassHandlerModules, series)
|
||||
const displaySets = this._createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series
|
||||
);
|
||||
|
||||
// Note: filtering in place because this._displaySets has writable: false
|
||||
for (let i = this._displaySets.length - 1; i >= 0; i--) {
|
||||
@@ -835,9 +835,11 @@ function _getDisplaySetFromSopClassModule(
|
||||
|
||||
const plugin = handlersForSopClassUID[0];
|
||||
const headers = DICOMWeb.getAuthorizationHeader();
|
||||
const errorInterceptor = errorHandler.getHTTPErrorHandler();
|
||||
const dicomWebClient = new dwc({
|
||||
url: study.getData().wadoRoot,
|
||||
headers,
|
||||
errorInterceptor,
|
||||
});
|
||||
|
||||
let displaySet = plugin.getDisplaySetFromSeries(
|
||||
|
||||
@@ -0,0 +1,6 @@
|
||||
// These should be overridden by the implementation
|
||||
const errorHandler = {
|
||||
getHTTPErrorHandler: () => null,
|
||||
};
|
||||
|
||||
export default errorHandler;
|
||||
@@ -18,6 +18,7 @@ import string from './string.js';
|
||||
import studies from './studies/';
|
||||
import ui from './ui';
|
||||
import user from './user.js';
|
||||
import errorHandler from './errorHandler.js';
|
||||
import utils, { hotkeys } from './utils/';
|
||||
|
||||
import {
|
||||
@@ -46,6 +47,7 @@ const OHIF = {
|
||||
string,
|
||||
ui,
|
||||
user,
|
||||
errorHandler,
|
||||
object,
|
||||
log,
|
||||
DICOMWeb,
|
||||
@@ -79,6 +81,7 @@ export {
|
||||
string,
|
||||
ui,
|
||||
user,
|
||||
errorHandler,
|
||||
object,
|
||||
log,
|
||||
DICOMWeb,
|
||||
|
||||
@@ -24,6 +24,7 @@ describe('Top level exports', () => {
|
||||
'header',
|
||||
'cornerstone',
|
||||
'default', //
|
||||
'errorHandler',
|
||||
'string',
|
||||
'ui',
|
||||
'user',
|
||||
|
||||
@@ -1,6 +1,8 @@
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
import { api } from 'dicomweb-client';
|
||||
|
||||
import errorHandler from '../../../errorHandler';
|
||||
|
||||
/**
|
||||
* Parses data returned from a QIDO search and transforms it into
|
||||
* an array of series that are present in the study
|
||||
@@ -79,6 +81,7 @@ export default function Instances(server, StudyInstanceUID) {
|
||||
const config = {
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const queryParams = getQIDOQueryParams(
|
||||
|
||||
@@ -1,6 +1,8 @@
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
|
||||
import errorHandler from '../../../errorHandler';
|
||||
|
||||
/**
|
||||
* Creates a QIDO date string for a date range query
|
||||
* Assumes the year is positive, at most 4 digits long.
|
||||
@@ -115,6 +117,7 @@ export default function Studies(server, filter) {
|
||||
const config = {
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
|
||||
@@ -9,6 +9,8 @@ import {
|
||||
addInstancesToStudy,
|
||||
} from './studyInstanceHelpers';
|
||||
|
||||
import errorHandler from '../../../errorHandler';
|
||||
|
||||
const { naturalizeDataset } = dcmjs.data.DicomMetaDictionary;
|
||||
|
||||
/**
|
||||
@@ -73,6 +75,7 @@ export default class RetrieveMetadataLoaderAsync extends RetrieveMetadataLoader
|
||||
const client = new api.DICOMwebClient({
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
});
|
||||
|
||||
this.client = client;
|
||||
@@ -117,7 +120,7 @@ export default class RetrieveMetadataLoaderAsync extends RetrieveMetadataLoader
|
||||
|
||||
return {
|
||||
seriesInstanceUIDsMap,
|
||||
seriesData
|
||||
seriesData,
|
||||
};
|
||||
}
|
||||
|
||||
@@ -155,11 +158,14 @@ export default class RetrieveMetadataLoaderAsync extends RetrieveMetadataLoader
|
||||
SeriesDescription: series.SeriesDescription,
|
||||
SeriesNumber: series.SeriesNumber,
|
||||
Modality: series.Modality,
|
||||
instances: []
|
||||
instances: [],
|
||||
};
|
||||
|
||||
if (study.series[idx]) {
|
||||
study.series[idx] = Object.assign(seriesDataFromQIDO, study.series[idx]);
|
||||
study.series[idx] = Object.assign(
|
||||
seriesDataFromQIDO,
|
||||
study.series[idx]
|
||||
);
|
||||
} else {
|
||||
study.series[idx] = seriesDataFromQIDO;
|
||||
}
|
||||
|
||||
@@ -3,6 +3,8 @@ import DICOMWeb from '../../../DICOMWeb/';
|
||||
import { createStudyFromSOPInstanceList } from './studyInstanceHelpers';
|
||||
import RetrieveMetadataLoader from './retrieveMetadataLoader';
|
||||
|
||||
import errorHandler from '../../../errorHandler';
|
||||
|
||||
/**
|
||||
* Class for sync load of study metadata.
|
||||
* It inherits from RetrieveMetadataLoader
|
||||
@@ -58,6 +60,7 @@ export default class RetrieveMetadataLoaderSync extends RetrieveMetadataLoader {
|
||||
const client = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
});
|
||||
|
||||
this.client = client;
|
||||
|
||||
@@ -144,7 +144,7 @@ async function makeSOPInstance(server, study, instance) {
|
||||
wadorsuri,
|
||||
wadoRoot: server.wadoRoot,
|
||||
imageRendering: server.imageRendering,
|
||||
thumbnailRendering: server.thumbnailRendering
|
||||
thumbnailRendering: server.thumbnailRendering,
|
||||
};
|
||||
|
||||
series.instances.push(sopInstance);
|
||||
@@ -160,8 +160,10 @@ async function makeSOPInstance(server, study, instance) {
|
||||
|
||||
const wadoRSMetadata = Object.assign(instance);
|
||||
|
||||
if (sopInstance.NumberOfFrames) {
|
||||
for (let i = 0; i < sopInstance.NumberOfFrames; i++) {
|
||||
const { NumberOfFrames } = sopInstance.metadata;
|
||||
|
||||
if (NumberOfFrames) {
|
||||
for (let i = 0; i < NumberOfFrames; i++) {
|
||||
const wadorsImageId = getWADORSImageId(sopInstance, i);
|
||||
|
||||
cornerstoneWADOImageLoader.wadors.metaDataManager.add(
|
||||
@@ -190,7 +192,7 @@ async function makeSOPInstance(server, study, instance) {
|
||||
*/
|
||||
async function addInstancesToStudy(server, study, sopInstanceList) {
|
||||
return Promise.all(
|
||||
sopInstanceList.map(function (sopInstance) {
|
||||
sopInstanceList.map(function(sopInstance) {
|
||||
return makeSOPInstance(server, study, sopInstance);
|
||||
})
|
||||
);
|
||||
|
||||
@@ -3,6 +3,8 @@ import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../DICOMWeb';
|
||||
|
||||
import errorHandler from '../errorHandler';
|
||||
|
||||
const getImageId = imageObj => {
|
||||
if (!imageObj) {
|
||||
return;
|
||||
@@ -57,11 +59,13 @@ const wadorsRetriever = (
|
||||
studyInstanceUID,
|
||||
seriesInstanceUID,
|
||||
sopInstanceUID,
|
||||
headers = DICOMWeb.getAuthorizationHeader()
|
||||
headers = DICOMWeb.getAuthorizationHeader(),
|
||||
errorInterceptor = errorHandler.getHTTPErrorHandler()
|
||||
) => {
|
||||
const config = {
|
||||
url,
|
||||
headers,
|
||||
errorInterceptor,
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
|
||||
|
||||
@@ -3,6 +3,8 @@ import DICOMWeb from '../../DICOMWeb';
|
||||
import str2ab from '../str2ab';
|
||||
import unpackOverlay from './unpackOverlay';
|
||||
|
||||
import errorHandler from '../../errorHandler';
|
||||
|
||||
export default async function fetchOverlayData(instance, server) {
|
||||
const OverlayDataPromises = [];
|
||||
const OverlayDataTags = [];
|
||||
@@ -21,14 +23,20 @@ export default async function fetchOverlayData(instance, server) {
|
||||
const inlineBinaryData = atob(instance[OverlayDataTag].InlineBinary);
|
||||
const arraybuffer = str2ab(inlineBinaryData);
|
||||
|
||||
instance[OverlayDataTag] = unpackOverlay(arraybuffer)
|
||||
} else if (instance[OverlayDataTag] && instance[OverlayDataTag].BulkDataURI) {
|
||||
instance[OverlayDataTag] = unpackOverlay(arraybuffer);
|
||||
} else if (
|
||||
instance[OverlayDataTag] &&
|
||||
instance[OverlayDataTag].BulkDataURI
|
||||
) {
|
||||
OverlayDataPromises.push(
|
||||
_getOverlayData(instance[OverlayDataTag], server)
|
||||
);
|
||||
OverlayDataTags.push(OverlayDataTag);
|
||||
} else if (instance[OverlayDataTag] && instance[OverlayDataTag] instanceof ArrayBuffer) {
|
||||
instance[OverlayDataTag] = unpackOverlay(instance[OverlayDataTag])
|
||||
} else if (
|
||||
instance[OverlayDataTag] &&
|
||||
instance[OverlayDataTag] instanceof ArrayBuffer
|
||||
) {
|
||||
instance[OverlayDataTag] = unpackOverlay(instance[OverlayDataTag]);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -60,6 +68,7 @@ async function _getOverlayData(tag, server) {
|
||||
const config = {
|
||||
url: server.wadoRoot, //BulkDataURI is absolute, so this isn't used
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const options = {
|
||||
@@ -71,5 +80,3 @@ async function _getOverlayData(tag, server) {
|
||||
.then(result => result[0])
|
||||
.then(unpackOverlay);
|
||||
}
|
||||
|
||||
|
||||
@@ -2,6 +2,8 @@ import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../DICOMWeb';
|
||||
import str2ab from '../str2ab';
|
||||
|
||||
import errorHandler from '../../errorHandler';
|
||||
|
||||
export default async function fetchPaletteColorLookupTableData(
|
||||
instance,
|
||||
server
|
||||
@@ -146,6 +148,7 @@ function _getPaletteColor(server, paletteColorLookupTableData, lutDescriptor) {
|
||||
const config = {
|
||||
url: server.wadoRoot, //BulkDataURI is absolute, so this isn't used
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
errorInterceptor: errorHandler.getHTTPErrorHandler(),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const options = {
|
||||
@@ -164,6 +167,8 @@ function _getPaletteColor(server, paletteColorLookupTableData, lutDescriptor) {
|
||||
resolve(arrayBufferToPaletteColorLUT(arraybuffer));
|
||||
});
|
||||
} else {
|
||||
return Promise.resolve(arrayBufferToPaletteColorLUT(paletteColorLookupTableData));
|
||||
return Promise.resolve(
|
||||
arrayBufferToPaletteColorLUT(paletteColorLookupTableData)
|
||||
);
|
||||
}
|
||||
}
|
||||
@@ -3,6 +3,36 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [3.10.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@3.10.1...@ohif/viewer@3.10.2) (2020-04-23)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* undefined `errorHandler` in cornerstoneWadoImageLoader configuration ([#1664](https://github.com/OHIF/Viewers/issues/1664)) ([709f147](https://github.com/OHIF/Viewers/commit/709f14708e2b0f912b5ea509114acd87af3149cb))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [3.10.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@3.10.0...@ohif/viewer@3.10.1) (2020-04-23)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [3.10.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@3.9.2...@ohif/viewer@3.10.0) (2020-04-23)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* configuration to hook into XHR Error handling ([e96205d](https://github.com/OHIF/Viewers/commit/e96205de35e5bec14dc8a9a8509db3dd4e6ecdb6))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [3.9.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@3.9.1...@ohif/viewer@3.9.2) (2020-04-22)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/viewer",
|
||||
"version": "3.9.2",
|
||||
"version": "3.10.2",
|
||||
"description": "OHIF Viewer",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
@@ -48,16 +48,16 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"@ohif/core": "^2.7.1",
|
||||
"@ohif/extension-cornerstone": "^2.5.2",
|
||||
"@ohif/core": "^2.8.1",
|
||||
"@ohif/extension-cornerstone": "^2.6.1",
|
||||
"@ohif/extension-dicom-html": "^1.1.2",
|
||||
"@ohif/extension-dicom-microscopy": "^0.50.9",
|
||||
"@ohif/extension-dicom-p10-downloader": "^0.0.2",
|
||||
"@ohif/extension-dicom-p10-downloader": "^0.1.0",
|
||||
"@ohif/extension-dicom-pdf": "^1.0.3",
|
||||
"@ohif/extension-dicom-rt": "^0.0.2",
|
||||
"@ohif/extension-dicom-segmentation": "^0.1.2",
|
||||
"@ohif/extension-lesion-tracker": "^0.2.0",
|
||||
"@ohif/extension-vtk": "^1.3.14",
|
||||
"@ohif/extension-vtk": "^1.4.1",
|
||||
"@ohif/i18n": "^0.52.8",
|
||||
"@ohif/ui": "^1.4.3",
|
||||
"@tanem/react-nprogress": "^1.1.25",
|
||||
@@ -66,7 +66,7 @@
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-math": "^0.1.8",
|
||||
"cornerstone-tools": "4.12.5",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "^0.12.0",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"dicomweb-client": "^0.4.4",
|
||||
|
||||
@@ -0,0 +1,19 @@
|
||||
window.config = function(props) {
|
||||
var servicesManager = props.servicesManager;
|
||||
|
||||
return {
|
||||
routerBasename: '/',
|
||||
enableGoogleCloudAdapter: true,
|
||||
enableGoogleCloudAdapterUI: false,
|
||||
showStudyList: true,
|
||||
httpErrorHandler: error => {
|
||||
// This is 429 when rejected from the public idc sandbox too often.
|
||||
console.warn(error.status);
|
||||
|
||||
// Could use services manager here to bring up a dialog/modal if needed.
|
||||
console.warn('test, navigate to https://ohif.org/');
|
||||
window.location = 'https://ohif.org/';
|
||||
},
|
||||
healthcareApiEndpoint: 'https://idc-sandbox-002.appspot.com/v1beta1',
|
||||
};
|
||||
};
|
||||
@@ -31,7 +31,8 @@ import {
|
||||
import i18n from '@ohif/i18n';
|
||||
|
||||
// TODO: This should not be here
|
||||
import './config';
|
||||
//import './config';
|
||||
import { setConfiguration } from './config';
|
||||
|
||||
/** Utils */
|
||||
import {
|
||||
@@ -123,6 +124,8 @@ class App extends Component {
|
||||
oidc,
|
||||
} = this._appConfig;
|
||||
|
||||
setConfiguration(this._appConfig);
|
||||
|
||||
this.initUserManager(oidc);
|
||||
_initServices([
|
||||
UINotificationService,
|
||||
|
||||
@@ -3,43 +3,59 @@ import cornerstone from 'cornerstone-core';
|
||||
import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
|
||||
import dicomParser from 'dicom-parser';
|
||||
import version from './version.js';
|
||||
import AppContext from './context/AppContext';
|
||||
|
||||
let homepage;
|
||||
const { process } = window;
|
||||
if (process && process.env && process.env.PUBLIC_URL) {
|
||||
homepage = process.env.PUBLIC_URL;
|
||||
}
|
||||
|
||||
window.info = {
|
||||
version,
|
||||
homepage,
|
||||
};
|
||||
|
||||
// For debugging
|
||||
//if (process.env.node_env === 'development') {
|
||||
window.cornerstone = cornerstone;
|
||||
window.cornerstoneWADOImageLoader = cornerstoneWADOImageLoader;
|
||||
//}
|
||||
|
||||
cornerstoneWADOImageLoader.external.cornerstone = cornerstone;
|
||||
cornerstoneWADOImageLoader.external.dicomParser = dicomParser;
|
||||
|
||||
OHIF.user.getAccessToken = () => {
|
||||
// TODO: Get the Redux store from somewhere else
|
||||
const state = window.store.getState();
|
||||
if (!state.oidc || !state.oidc.user) {
|
||||
return;
|
||||
export function setConfiguration(appConfig) {
|
||||
let homepage;
|
||||
const { process } = window;
|
||||
if (process && process.env && process.env.PUBLIC_URL) {
|
||||
homepage = process.env.PUBLIC_URL;
|
||||
}
|
||||
|
||||
return state.oidc.user.access_token;
|
||||
};
|
||||
window.info = {
|
||||
version,
|
||||
homepage,
|
||||
};
|
||||
|
||||
cornerstoneWADOImageLoader.configure({
|
||||
beforeSend: function(xhr) {
|
||||
const headers = OHIF.DICOMWeb.getAuthorizationHeader();
|
||||
// For debugging
|
||||
//if (process.env.node_env === 'development') {
|
||||
window.cornerstone = cornerstone;
|
||||
window.cornerstoneWADOImageLoader = cornerstoneWADOImageLoader;
|
||||
//}
|
||||
|
||||
if (headers.Authorization) {
|
||||
xhr.setRequestHeader('Authorization', headers.Authorization);
|
||||
cornerstoneWADOImageLoader.external.cornerstone = cornerstone;
|
||||
cornerstoneWADOImageLoader.external.dicomParser = dicomParser;
|
||||
|
||||
OHIF.user.getAccessToken = () => {
|
||||
// TODO: Get the Redux store from somewhere else
|
||||
const state = window.store.getState();
|
||||
if (!state.oidc || !state.oidc.user) {
|
||||
return;
|
||||
}
|
||||
},
|
||||
});
|
||||
|
||||
return state.oidc.user.access_token;
|
||||
};
|
||||
|
||||
OHIF.errorHandler.getHTTPErrorHandler = () => {
|
||||
// const { appConfig = {} } = AppContext;
|
||||
|
||||
return appConfig.httpErrorHandler;
|
||||
};
|
||||
|
||||
cornerstoneWADOImageLoader.configure({
|
||||
beforeSend: function(xhr) {
|
||||
const headers = OHIF.DICOMWeb.getAuthorizationHeader();
|
||||
|
||||
if (headers.Authorization) {
|
||||
xhr.setRequestHeader('Authorization', headers.Authorization);
|
||||
}
|
||||
},
|
||||
errorInterceptor: error => {
|
||||
// const { appConfig = {} } = AppContext;
|
||||
|
||||
if (typeof appConfig.httpErrorHandler === 'function') {
|
||||
appConfig.httpErrorHandler(error);
|
||||
}
|
||||
},
|
||||
});
|
||||
}
|
||||
@@ -1,5 +1,6 @@
|
||||
import { httpErrorToStr, checkDicomFile } from '../utils/helpers';
|
||||
import { api } from 'dicomweb-client';
|
||||
import { errorHandler } from '@ohif/core';
|
||||
|
||||
class DicomUploadService {
|
||||
async smartUpload(files, url, uploadCallback, cancellationToken) {
|
||||
@@ -22,8 +23,7 @@ class DicomUploadService {
|
||||
let error = null;
|
||||
try {
|
||||
if (chunk.length > 1) throw new Error('Not implemented');
|
||||
if (chunk.length === 1)
|
||||
await this.simpleUpload(chunk[0], url);
|
||||
if (chunk.length === 1) await this.simpleUpload(chunk[0], url);
|
||||
} catch (err) {
|
||||
// It looks like a stupid bug of Babel that err is not an actual Exception object
|
||||
error = httpErrorToStr(err);
|
||||
@@ -76,11 +76,12 @@ class DicomUploadService {
|
||||
|
||||
getClient(url) {
|
||||
const headers = this.retrieveAuthHeaderFunc();
|
||||
const errorInterceptor = errorHandler.getHTTPErrorHandler();
|
||||
|
||||
// TODO: a bit weird we are creating a new dicomweb client instance for every upload
|
||||
return new api.DICOMwebClient({
|
||||
url,
|
||||
headers
|
||||
headers,
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
@@ -5953,10 +5953,10 @@ cornerstone-tools@4.12.5:
|
||||
"@babel/runtime" "7.1.2"
|
||||
cornerstone-math "0.1.7"
|
||||
|
||||
cornerstone-wado-image-loader@^3.0.0:
|
||||
version "3.0.6"
|
||||
resolved "https://registry.yarnpkg.com/cornerstone-wado-image-loader/-/cornerstone-wado-image-loader-3.0.6.tgz#7b2be91f8f658de3a7474e029aa8314a35725132"
|
||||
integrity sha512-1luWOh1GzkboZ3uxfu4T8vh7K9nlDiiEbQ4dYIY9oobRZVZQbQiLT8wEZPbb4JTUe7UWJISHPCNgtAU8UE9DNw==
|
||||
cornerstone-wado-image-loader@^3.1.0:
|
||||
version "3.1.0"
|
||||
resolved "https://registry.yarnpkg.com/cornerstone-wado-image-loader/-/cornerstone-wado-image-loader-3.1.0.tgz#6007470be896678636da3188f194f5e66ed07858"
|
||||
integrity sha512-n2yadbwK7rCHqJyh5AUmYVPUY5m7boKpheK60sXV41Z0eSZLin9Ja+P9yeAvkg0VGV+/zaBZGPUGY3YyjdWBgg==
|
||||
dependencies:
|
||||
dicom-parser "^1.8.3"
|
||||
pako "^1.0.10"
|
||||
@@ -6858,6 +6858,11 @@ dicomweb-client@^0.5.2:
|
||||
resolved "https://registry.yarnpkg.com/dicomweb-client/-/dicomweb-client-0.5.2.tgz#aa5a4a6a5044b0702bb0a8a2662c86cd16901951"
|
||||
integrity sha512-e11n2+g7HfBuMyopWq76W11eSZJ707g4U1XiO8URA+23aoe0g1kGAtlPB29NKXl7zX7RznTJ7wfRBxFkW6EJDA==
|
||||
|
||||
dicomweb-client@^0.6.0:
|
||||
version "0.6.0"
|
||||
resolved "https://registry.yarnpkg.com/dicomweb-client/-/dicomweb-client-0.6.0.tgz#5e35ada52fe0155af1cc1f0e84f9c7f76477f92d"
|
||||
integrity sha512-VAkBg4W6odIo2XsFxqjN/rptd7bQ8oHpRuKH5d46E9BUIPzRschazE8Dx1xg7/l3N3f1M70jB7yJ339arAXiDQ==
|
||||
|
||||
diff-sequences@^24.9.0:
|
||||
version "24.9.0"
|
||||
resolved "https://registry.yarnpkg.com/diff-sequences/-/diff-sequences-24.9.0.tgz#5715d6244e2aa65f48bba0bc972db0b0b11e95b5"
|
||||
@@ -11428,9 +11433,9 @@ jszip@3.2.2:
|
||||
set-immediate-shim "~1.0.1"
|
||||
|
||||
jszip@^3.2.2:
|
||||
version "3.3.0"
|
||||
resolved "https://registry.yarnpkg.com/jszip/-/jszip-3.3.0.tgz#29d72c21a54990fa885b11fc843db320640d5271"
|
||||
integrity sha512-EJ9k766htB1ZWnsV5ZMDkKLgA+201r/ouFF8R2OigVjVdcm2rurcBrrdXaeqBJbqnUVMko512PYmlncBKE1Huw==
|
||||
version "3.4.0"
|
||||
resolved "https://registry.yarnpkg.com/jszip/-/jszip-3.4.0.tgz#1a69421fa5f0bb9bc222a46bca88182fba075350"
|
||||
integrity sha512-gZAOYuPl4EhPTXT0GjhI3o+ZAz3su6EhLrKUoAivcKqyqC7laS5JEv4XWZND9BgcDcF83vI85yGbDmDR6UhrIg==
|
||||
dependencies:
|
||||
lie "~3.3.0"
|
||||
pako "~1.0.2"
|
||||
@@ -16385,7 +16390,7 @@ regenerator-runtime@^0.11.0, regenerator-runtime@^0.11.1:
|
||||
resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.11.1.tgz#be05ad7f9bf7d22e056f9726cee5017fbf19e2e9"
|
||||
integrity sha512-MguG95oij0fC3QV3URf4V2SDYGJhJnJGqvIIgdECeODCT98wSWDAJ94SSuVpYQUoTcGUIL6L4yNB7j1DFFHSBg==
|
||||
|
||||
regenerator-runtime@^0.13.1, regenerator-runtime@^0.13.2:
|
||||
regenerator-runtime@^0.13.1, regenerator-runtime@^0.13.2, regenerator-runtime@^0.13.4:
|
||||
version "0.13.5"
|
||||
resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.13.5.tgz#d878a1d094b4306d10b9096484b33ebd55e26697"
|
||||
integrity sha512-ZS5w8CpKFinUzOwW3c83oPeVXoNsrLsaCoLtJvAClH135j/R77RuymhiSErhm2lKcwSCIpmvIWSbDkIfAqKQlA==
|
||||
|
||||
Reference in new issue
Block a user