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Author SHA1 Message Date
ohif-bot 5210c80369 chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.1.1
 - @ohif/extension-vtk@1.9.2
 - @ohif/core@2.11.1
 - @ohif/ui@1.7.1
 - @ohif/viewer@4.6.2
2020-12-03 15:19:00 +00:00
Igor OctavianoandDavide Punzo f57725ac8b fix: fallback to original dataset VR for XS
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 16:15:27 +01:00
13 changed files with 114 additions and 35 deletions

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+11
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@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [0.1.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.1.0...@ohif/extension-dicom-tag-browser@0.1.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [0.1.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-tag-browser@0.0.5...@ohif/extension-dicom-tag-browser@0.1.0) (2020-12-03)
+1 -1
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@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-tag-browser",
"version": "0.1.0",
"version": "0.1.1",
"description": "OHIF extension for checking DICOM headers.",
"author": "OHIF",
"license": "MIT",
@@ -1,5 +1,5 @@
import React, { useState, useEffect } from 'react';
import { classes } from '@ohif/core';
import { classes, cornerstone as OHIFCornerstone } from '@ohif/core';
import dcmjs from 'dcmjs';
import DicomBrowserSelect from './DicomBrowserSelect';
import moment from 'moment';
@@ -10,6 +10,8 @@ const { ImageSet } = classes;
const { DicomMetaDictionary } = dcmjs.data;
const { nameMap } = DicomMetaDictionary;
const { metadataProvider } = OHIFCornerstone;
const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
const [
activeDisplaySetInstanceUID,
@@ -17,6 +19,7 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
] = useState(displaySetInstanceUID);
const [activeInstance, setActiveInstance] = useState(0);
const [tags, setTags] = useState([]);
const [meta, setMeta] = useState('');
const [instanceList, setInstanceList] = useState([]);
const [displaySetList, setDisplaySetList] = useState([]);
const [isImageStack, setIsImageStack] = useState(false);
@@ -83,6 +86,7 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
}
setTags(getSortedTags(metadata));
setMeta(metadata);
setInstanceList(instanceList);
setDisplaySetList(newDisplaySetList);
setIsImageStack(isImageStack);
@@ -114,41 +118,43 @@ const DicomTagBrowser = ({ displaySets, displaySetInstanceUID }) => {
options={displaySetList}
/>
{instanceSelectList}
<DicomTagTable tags={tags}></DicomTagTable>
<DicomTagTable tags={tags} meta={meta}></DicomTagTable>
</div>
);
};
function DicomTagTable({ tags }) {
const rows = getFormattedRowsFromTags(tags);
function DicomTagTable({ tags, meta }) {
const rows = getFormattedRowsFromTags(tags, meta);
return (
<div>
<table className="dicom-tag-browser-table">
<tr>
<th className="dicom-tag-browser-table-left">Tag</th>
<th className="dicom-tag-browser-table-left">Value Representation</th>
<th className="dicom-tag-browser-table-left">Keyword</th>
<th className="dicom-tag-browser-table-left">Value</th>
</tr>
{rows.map(row => {
const className = row.className ? row.className : null;
<tbody>
<tr>
<th className="dicom-tag-browser-table-left">Tag</th>
<th className="dicom-tag-browser-table-left">Value Representation</th>
<th className="dicom-tag-browser-table-left">Keyword</th>
<th className="dicom-tag-browser-table-left">Value</th>
</tr>
{rows.map((row, index) => {
const className = row.className ? row.className : null;
return (
<tr className={className}>
<td>{row[0]}</td>
<td className="dicom-tag-browser-table-center">{row[1]}</td>
<td>{row[2]}</td>
<td>{row[3]}</td>
</tr>
);
})}
return (
<tr className={className} key={`DICOMTagRow-${index}`}>
<td>{row[0]}</td>
<td className="dicom-tag-browser-table-center">{row[1]}</td>
<td>{row[2]}</td>
<td>{row[3]}</td>
</tr>
);
})}
</tbody>
</table>
</div>
);
}
function getFormattedRowsFromTags(tags) {
function getFormattedRowsFromTags(tags, meta) {
const rows = [];
tags.forEach(tagInfo => {
@@ -175,6 +181,17 @@ function getFormattedRowsFromTags(tags) {
rows.push(...formatedRowsFromTags);
});
} else {
if (tagInfo.vr === 'xs') {
try {
const dataset = metadataProvider.getStudyDataset(meta.StudyInstanceUID);
const tag = dcmjs.data.Tag.fromPString(tagInfo.tag).toCleanString();
const originalTagInfo = dataset[tag];
tagInfo.vr = originalTagInfo.vr;
} catch (error) {
console.error(`Failed to parse value representation for tag '${tagInfo.keyword}'`);
}
}
rows.push([
`${tagInfo.tagIndent}${tagInfo.tag}`,
tagInfo.vr,
+8
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@@ -3,6 +3,14 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.9.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.9.1...@ohif/extension-vtk@1.9.2) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-vtk
## [1.9.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.9.0...@ohif/extension-vtk@1.9.1) (2020-12-03)
**Note:** Version bump only for package @ohif/extension-vtk
+3 -3
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@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-vtk",
"version": "1.9.1",
"version": "1.9.2",
"description": "OHIF extension for VTK.js",
"author": "OHIF",
"license": "MIT",
@@ -53,8 +53,8 @@
"react-vtkjs-viewport": "^0.14.2"
},
"devDependencies": {
"@ohif/core": "^2.11.0",
"@ohif/ui": "^1.7.0",
"@ohif/core": "^2.11.1",
"@ohif/ui": "^1.7.1",
"cornerstone-tools": "^4.20.1",
"cornerstone-wado-image-loader": "^3.1.0",
"dicom-parser": "^1.8.3",
+11
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@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [2.11.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.11.0...@ohif/core@2.11.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [2.11.0](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.7...@ohif/core@2.11.0) (2020-12-03)
+1 -1
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@@ -1,6 +1,6 @@
{
"name": "@ohif/core",
"version": "2.11.0",
"version": "2.11.1",
"description": "Generic business logic for web-based medical imaging applications",
"author": "OHIF Core Team",
"license": "MIT",
@@ -20,6 +20,7 @@ class MetadataProvider {
writable: false,
value: new Map(),
});
this.datasets = {};
}
async addInstance(dicomJSONDatasetOrP10ArrayBuffer, options = {}) {
@@ -52,6 +53,7 @@ class MetadataProvider {
SOPInstanceUID,
} = naturalizedDataset;
this._getAndCacheStudyDataset(StudyInstanceUID, dicomJSONDataset);
const study = this._getAndCacheStudy(StudyInstanceUID);
const series = this._getAndCacheSeriesFromStudy(study, SeriesInstanceUID);
const instance = this._getAndCacheInstanceFromStudy(series, SOPInstanceUID);
@@ -71,6 +73,16 @@ class MetadataProvider {
this.imageIdToUIDs.set(imageId, uids);
}
_getAndCacheStudyDataset(StudyInstanceUID, dataset) {
if (!this.datasets[StudyInstanceUID]) {
this.datasets[StudyInstanceUID] = dataset;
}
}
getStudyDataset(StudyInstanceUID) {
return this.datasets[StudyInstanceUID];
}
_getAndCacheStudy(StudyInstanceUID) {
const studies = this.studies;
@@ -83,6 +95,7 @@ class MetadataProvider {
return study;
}
_getAndCacheSeriesFromStudy(study, SeriesInstanceUID) {
let series = study.series.get(SeriesInstanceUID);
+11
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@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.7.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.7.0...@ohif/ui@1.7.1) (2020-12-03)
### Bug Fixes
* fallback to original dataset VR for XS ([f57725a](https://github.com/OHIF/Viewers/commit/f57725ac8bfd59ea46ab334a1823882afadefba1))
# [1.7.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.6.0...@ohif/ui@1.7.0) (2020-12-03)
+1 -1
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@@ -1,6 +1,6 @@
{
"name": "@ohif/ui",
"version": "1.7.0",
"version": "1.7.1",
"description": "A set of React components for Medical Imaging Viewers",
"author": "OHIF Contributors",
"license": "MIT",
@@ -15,8 +15,8 @@ const ErrorFallback = ({ error, componentStack, resetErrorBoundary }) => {
const OHIFErrorBoundary = ({
context = 'OHIF',
onReset = () => {},
onError = () => {},
onReset = () => { },
onError = () => { },
fallbackComponent,
children,
}) => {
@@ -45,7 +45,7 @@ OHIFErrorBoundary.propTypes = {
onReset: PropTypes.func,
onError: PropTypes.func,
children: PropTypes.node.isRequired,
fallbackComponent: PropTypes.element,
fallbackComponent: PropTypes.oneOfType([PropTypes.node, PropTypes.func, PropTypes.element]),
};
export default OHIFErrorBoundary;
+8
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@@ -3,6 +3,14 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [4.6.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.1...@ohif/viewer@4.6.2) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
## [4.6.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.6.0...@ohif/viewer@4.6.1) (2020-12-03)
**Note:** Version bump only for package @ohif/viewer
+4 -4
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@@ -1,6 +1,6 @@
{
"name": "@ohif/viewer",
"version": "4.6.1",
"version": "4.6.2",
"description": "OHIF Viewer",
"author": "OHIF Contributors",
"license": "MIT",
@@ -49,7 +49,7 @@
},
"dependencies": {
"@babel/runtime": "^7.5.5",
"@ohif/core": "^2.11.0",
"@ohif/core": "^2.11.1",
"@ohif/extension-cornerstone": "^2.9.6",
"@ohif/extension-debugging": "^0.1.6",
"@ohif/extension-dicom-html": "^1.2.9",
@@ -58,9 +58,9 @@
"@ohif/extension-dicom-rt": "^0.4.9",
"@ohif/extension-dicom-segmentation": "^0.4.7",
"@ohif/extension-lesion-tracker": "^0.2.1",
"@ohif/extension-vtk": "^1.9.1",
"@ohif/extension-vtk": "^1.9.2",
"@ohif/i18n": "^0.53.0",
"@ohif/ui": "^1.7.0",
"@ohif/ui": "^1.7.1",
"@tanem/react-nprogress": "^1.1.25",
"classnames": "^2.2.6",
"core-js": "^3.2.1",