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33
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No files matched your search
@@ -11,6 +11,7 @@ node -v
|
||||
|
||||
# Install build deps and all monorepo package dependencies. Yarn Workspaces
|
||||
# should also symlink all projects appropriately
|
||||
yarn run lerna:restore
|
||||
yarn install --no-ignore-optional --pure-lockfile
|
||||
|
||||
# Build && Move PWA Output
|
||||
@@ -21,6 +22,19 @@ mv platform/viewer/dist/* .netlify/www/pwa -v
|
||||
# Build && Move script output
|
||||
# yarn run build:package
|
||||
|
||||
# Build && Move Docz Output
|
||||
# Using local yarn install to prevent Gatsby from needing to access
|
||||
# node_modules above the platform/ui folder
|
||||
cd platform/ui
|
||||
yarn install
|
||||
yarn run build
|
||||
cd ../..
|
||||
mkdir -p ./.netlify/www/ui
|
||||
mv platform/ui/.docz/dist/* .netlify/www/ui -v
|
||||
|
||||
# Cache all of the node_module dependencies in
|
||||
# extensions, modules, and platform packages
|
||||
yarn run lerna:cache
|
||||
echo 'Nothing left to see here. Go home, folks.'
|
||||
|
||||
# Build using react-scripts
|
||||
|
||||
@@ -3,6 +3,63 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [2.9.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.3...@ohif/extension-cornerstone@2.9.4) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-cornerstone
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.9.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.2...@ohif/extension-cornerstone@2.9.3) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-cornerstone
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.9.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.1...@ohif/extension-cornerstone@2.9.2) (2020-08-20)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Updated react-cornerstone-viewport to version 4.0.2 ([#2001](https://github.com/OHIF/Viewers/issues/2001)) ([59ab68b](https://github.com/OHIF/Viewers/commit/59ab68b4edbfec010170c4429c300a53f688bf94))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.9.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.0...@ohif/extension-cornerstone@2.9.1) (2020-08-20)
|
||||
|
||||
|
||||
### Performance Improvements
|
||||
|
||||
* **stackPrefetch:** Added stackPrefetch config with 20 max concurrent requests ([#2000](https://github.com/OHIF/Viewers/issues/2000)) ([3b02a06](https://github.com/OHIF/Viewers/commit/3b02a06f5e250660edde4862ce44147db3dc3ab9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [2.9.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.5...@ohif/extension-cornerstone@2.9.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.8.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.4...@ohif/extension-cornerstone@2.8.5) (2020-08-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-cornerstone
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.8.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.3...@ohif/extension-cornerstone@2.8.4) (2020-07-13)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-cornerstone",
|
||||
"version": "2.8.4",
|
||||
"version": "2.9.4",
|
||||
"description": "OHIF extension for Cornerstone",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -34,9 +34,9 @@
|
||||
"@ohif/ui": "^0.50.0",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-math": "^0.1.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "0.16.0",
|
||||
"dcmjs": "0.16.3",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"hammerjs": "^2.0.8",
|
||||
"prop-types": "^15.6.2",
|
||||
@@ -51,6 +51,6 @@
|
||||
"classnames": "^2.2.6",
|
||||
"lodash.merge": "^4.6.2",
|
||||
"lodash.throttle": "^4.1.1",
|
||||
"react-cornerstone-viewport": "2.3.9"
|
||||
"react-cornerstone-viewport": "4.0.2"
|
||||
}
|
||||
}
|
||||
@@ -3,6 +3,7 @@ import init from './init.js';
|
||||
import commandsModule from './commandsModule.js';
|
||||
import toolbarModule from './toolbarModule.js';
|
||||
import CornerstoneViewportDownloadForm from './CornerstoneViewportDownloadForm';
|
||||
import { version } from '../package.json';
|
||||
|
||||
const Component = React.lazy(() => {
|
||||
return import('./OHIFCornerstoneViewport');
|
||||
@@ -24,6 +25,7 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'cornerstone',
|
||||
version,
|
||||
|
||||
/**
|
||||
*
|
||||
|
||||
@@ -34,4 +34,11 @@ export default function(configuration = {}) {
|
||||
cornerstoneTools.toolColors.setActiveColor('rgb(0, 255, 0)');
|
||||
|
||||
cornerstoneTools.store.state.touchProximity = 40;
|
||||
|
||||
// Configure stack prefetch
|
||||
cornerstoneTools.stackPrefetch.setConfiguration({
|
||||
maxImagesToPrefetch: Infinity,
|
||||
preserveExistingPool: false,
|
||||
maxSimultaneousRequests: 20,
|
||||
});
|
||||
}
|
||||
File renamed without changes.
File renamed without changes.
@@ -3,6 +3,14 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## 0.1.3 (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-debugging
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.1.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-p10-downloader@0.1.1...@ohif/extension-dicom-p10-downloader@0.1.2) (2020-06-18)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-p10-downloader
|
||||
File renamed without changes.
File renamed without changes.
@@ -1,7 +1,7 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-p10-downloader",
|
||||
"version": "0.1.2",
|
||||
"description": "OHIF extension for downloading DICOM P10 files",
|
||||
"name": "@ohif/extension-debugging",
|
||||
"version": "0.1.3",
|
||||
"description": "OHIF extension for debugging.",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
"repository": "OHIF/Viewers",
|
||||
@@ -33,6 +33,7 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"detect-browser": "5.1.1",
|
||||
"dicomweb-client": "^0.6.0",
|
||||
"file-saver": "^2.0.2",
|
||||
"jszip": "^3.2.2"
|
||||
@@ -0,0 +1,4 @@
|
||||
.debugReportModalHeader {
|
||||
padding: 10px 0 10px;
|
||||
color: var(--active-color);
|
||||
}
|
||||
@@ -0,0 +1,161 @@
|
||||
import React from 'react';
|
||||
import { detect } from 'detect-browser';
|
||||
import './DebugReportModal.css';
|
||||
|
||||
const DubugReportModal = ({
|
||||
viewports,
|
||||
studies,
|
||||
servers,
|
||||
extensionManager,
|
||||
}) => {
|
||||
return (
|
||||
<div>
|
||||
<table>
|
||||
{getAppVersion()}
|
||||
{getExtensionVersions(extensionManager)}
|
||||
{getBrowserInfo()}
|
||||
{getCurrentStudyUrl()}
|
||||
{getLayout(viewports)}
|
||||
</table>
|
||||
</div>
|
||||
);
|
||||
};
|
||||
|
||||
const getAppVersion = () => {
|
||||
return (
|
||||
<React.Fragment>
|
||||
<tr>
|
||||
<th className="debugReportModalHeader">App</th>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>Version</td>
|
||||
<td>{window.version}</td>
|
||||
</tr>
|
||||
</React.Fragment>
|
||||
);
|
||||
};
|
||||
|
||||
const getCurrentStudyUrl = () => {
|
||||
return (
|
||||
<React.Fragment>
|
||||
<tr>
|
||||
<th className="debugReportModalHeader">App</th>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>URL</td>
|
||||
<td>{window.location.href}</td>
|
||||
</tr>
|
||||
</React.Fragment>
|
||||
);
|
||||
};
|
||||
|
||||
const getExtensionVersions = extensionManager => {
|
||||
const { registeredExtensionVesions } = extensionManager;
|
||||
|
||||
const lineItems = Object.keys(registeredExtensionVesions).map(extensionId => {
|
||||
const version = registeredExtensionVesions[extensionId];
|
||||
|
||||
return (
|
||||
<tr>
|
||||
<td>{extensionId}</td>
|
||||
<td>{version}</td>
|
||||
</tr>
|
||||
);
|
||||
});
|
||||
|
||||
return (
|
||||
<React.Fragment>
|
||||
<th className="debugReportModalHeader">Extensions</th>
|
||||
{lineItems}
|
||||
</React.Fragment>
|
||||
);
|
||||
};
|
||||
|
||||
const getLayout = viewports => {
|
||||
const { numRows, numColumns } = viewports;
|
||||
|
||||
return (
|
||||
<React.Fragment>
|
||||
<tr>
|
||||
<th className="debugReportModalHeader">Viewports</th>
|
||||
</tr>
|
||||
<tr>
|
||||
<th>Layout</th>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>Rows</td>
|
||||
<td>{numRows}</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>Columns</td>
|
||||
<td>{numColumns}</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<th>SeriesInstanceUIDs</th>
|
||||
</tr>
|
||||
{getSeriesInstanceUIDsPerRow(viewports)}
|
||||
</React.Fragment>
|
||||
);
|
||||
};
|
||||
|
||||
const getBrowserInfo = () => {
|
||||
const browser = detect();
|
||||
|
||||
const { name, os, type, version } = browser;
|
||||
|
||||
return (
|
||||
<React.Fragment>
|
||||
<tr>
|
||||
<th className="debugReportModalHeader">Platform</th>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>name</td>
|
||||
<td>{name}</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>os</td>
|
||||
<td>{os}</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>type</td>
|
||||
<td>{type}</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td>version</td>
|
||||
<td>{version}</td>
|
||||
</tr>
|
||||
</React.Fragment>
|
||||
);
|
||||
};
|
||||
|
||||
const getSeriesInstanceUIDsPerRow = viewports => {
|
||||
const { viewportSpecificData, numColumns } = viewports;
|
||||
|
||||
debugger;
|
||||
|
||||
// NOTE viewportSpecificData is actually an object with numerical keys.
|
||||
return Object.keys(viewportSpecificData).map(viewportIndex => {
|
||||
const vsd = viewportSpecificData[viewportIndex];
|
||||
|
||||
const [row, column] = _viewportIndexToViewportPosition(
|
||||
viewportIndex,
|
||||
numColumns
|
||||
);
|
||||
|
||||
return (
|
||||
<tr>
|
||||
<td>{`[${row},${column}]`}</td>
|
||||
<td>{vsd.SeriesInstanceUID}</td>
|
||||
</tr>
|
||||
);
|
||||
});
|
||||
};
|
||||
|
||||
const _viewportIndexToViewportPosition = (viewportIndex, numColumns) => {
|
||||
const row = Math.floor(viewportIndex / numColumns);
|
||||
const column = viewportIndex % numColumns;
|
||||
|
||||
return [row, column];
|
||||
};
|
||||
|
||||
export default DubugReportModal;
|
||||
+26
-1
@@ -8,12 +8,14 @@ import {
|
||||
getSOPInstanceReferencesFromViewports,
|
||||
} from './utils';
|
||||
import _downloadAndZip, { downloadInstances } from './downloadAndZip';
|
||||
import DebugReportModal from './DebugReportModal';
|
||||
import React from 'react';
|
||||
|
||||
const {
|
||||
utils: { Queue },
|
||||
} = OHIF;
|
||||
|
||||
export function getCommands(context) {
|
||||
export function getCommands(context, servicesManager, extensionManager) {
|
||||
const queue = new Queue(1);
|
||||
const actions = {
|
||||
/**
|
||||
@@ -87,9 +89,32 @@ export function getCommands(context) {
|
||||
serverConfig
|
||||
);
|
||||
},
|
||||
openDebugInfoModal({ viewports, studies, servers }) {
|
||||
const { UIModalService } = servicesManager.services;
|
||||
|
||||
const WrappedDebugReportModal = function() {
|
||||
return (
|
||||
<DebugReportModal
|
||||
viewports={viewports}
|
||||
studies={studies}
|
||||
servers={servers}
|
||||
extensionManager={extensionManager}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
UIModalService.show({
|
||||
content: WrappedDebugReportModal,
|
||||
title: `Debugging Information`,
|
||||
});
|
||||
},
|
||||
};
|
||||
|
||||
const definitions = {
|
||||
openDebugInfoModal: {
|
||||
commandFn: actions.openDebugInfoModal,
|
||||
storeContexts: ['viewports', 'servers', 'studies'],
|
||||
},
|
||||
downloadAndZip: {
|
||||
commandFn: queue.bindSafe(actions.downloadAndZip, error),
|
||||
storeContexts: ['servers'],
|
||||
File renamed without changes.
@@ -1,5 +1,7 @@
|
||||
import { getDicomWebClientFromConfig } from './utils';
|
||||
import { getCommands } from './commandsModule';
|
||||
import { version } from '../package.json';
|
||||
import toolbarModule from './toolbarModule';
|
||||
|
||||
/**
|
||||
* Constants
|
||||
@@ -21,6 +23,7 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'dicom-p10-downloader',
|
||||
version,
|
||||
|
||||
/**
|
||||
* LIFECYCLE HOOKS
|
||||
@@ -37,7 +40,11 @@ export default {
|
||||
* MODULE GETTERS
|
||||
*/
|
||||
|
||||
getCommandsModule() {
|
||||
return getCommands(sharedContext);
|
||||
getCommandsModule({ servicesManager, extensionManager }) {
|
||||
return getCommands(sharedContext, servicesManager, extensionManager);
|
||||
},
|
||||
|
||||
getToolbarModule() {
|
||||
return toolbarModule;
|
||||
},
|
||||
};
|
||||
@@ -0,0 +1,20 @@
|
||||
const TOOLBAR_BUTTON_TYPES = {
|
||||
COMMAND: 'command',
|
||||
};
|
||||
|
||||
const definitions = [
|
||||
{
|
||||
id: 'Debug Info',
|
||||
label: 'Debug Info',
|
||||
icon: 'cog',
|
||||
//
|
||||
type: TOOLBAR_BUTTON_TYPES.COMMAND,
|
||||
commandName: 'openDebugInfoModal',
|
||||
context: 'VIEWER',
|
||||
},
|
||||
];
|
||||
|
||||
export default {
|
||||
definitions,
|
||||
defaultContext: 'VIEWER',
|
||||
};
|
||||
File renamed without changes.
@@ -3,6 +3,30 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.2.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.6...@ohif/extension-dicom-html@1.2.7) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-html
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.5...@ohif/extension-dicom-html@1.2.6) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-html
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.4...@ohif/extension-dicom-html@1.2.5) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-html
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.3...@ohif/extension-dicom-html@1.2.4) (2020-07-13)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-html
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-html",
|
||||
"version": "1.2.4",
|
||||
"version": "1.2.7",
|
||||
"description": "OHIF extension for rendering structured reports to HTML",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -29,7 +29,7 @@
|
||||
},
|
||||
"peerDependencies": {
|
||||
"@ohif/core": "^0.50.0",
|
||||
"dcmjs": "0.16.0",
|
||||
"dcmjs": "0.16.3",
|
||||
"prop-types": "^15.6.2",
|
||||
"react": "^16.8.6",
|
||||
"react-dom": "^16.8.6"
|
||||
|
||||
@@ -22,6 +22,12 @@ const OHIFDicomHtmlSopClassHandler = {
|
||||
getDisplaySetFromSeries(series, study, dicomWebClient, authorizationHeaders) {
|
||||
const instance = series.getFirstInstance();
|
||||
|
||||
const {
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
} = instance._instance.metadata;
|
||||
|
||||
return {
|
||||
plugin: 'html',
|
||||
Modality: 'SR',
|
||||
@@ -31,6 +37,9 @@ const OHIFDicomHtmlSopClassHandler = {
|
||||
SOPInstanceUID: instance.getSOPInstanceUID(),
|
||||
SeriesInstanceUID: series.getSeriesInstanceUID(),
|
||||
StudyInstanceUID: study.getStudyInstanceUID(),
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
authorizationHeaders,
|
||||
};
|
||||
},
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import React from 'react';
|
||||
import OHIFDicomHtmlSopClassHandler from './OHIFDicomHtmlSopClassHandler.js';
|
||||
import { version } from '../package.json';
|
||||
|
||||
const Component = React.lazy(() => {
|
||||
return import('./OHIFDicomHtmlViewport');
|
||||
@@ -18,6 +19,7 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'html',
|
||||
version,
|
||||
|
||||
getViewportModule() {
|
||||
return OHIFDicomHtmlViewport;
|
||||
|
||||
@@ -3,6 +3,22 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.51.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.51.1...@ohif/extension-dicom-microscopy@0.51.2) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-microscopy
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.51.0...@ohif/extension-dicom-microscopy@0.51.1) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-microscopy
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.51.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.50.9...@ohif/extension-dicom-microscopy@0.51.0) (2020-06-04)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-microscopy",
|
||||
"version": "0.51.0",
|
||||
"version": "0.51.2",
|
||||
"description": "OHIF extension for Dicom Microscopy",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -12,6 +12,12 @@ const DicomMicroscopySopClassHandler = {
|
||||
getDisplaySetFromSeries(series, study, dicomWebClient) {
|
||||
const instance = series.getFirstInstance();
|
||||
|
||||
const {
|
||||
ContentDate,
|
||||
ContentTime,
|
||||
SeriesNumber,
|
||||
} = instance._instance.metadata;
|
||||
|
||||
// Note: We are passing the dicomweb client into each viewport!
|
||||
|
||||
return {
|
||||
@@ -22,6 +28,9 @@ const DicomMicroscopySopClassHandler = {
|
||||
SOPInstanceUID: instance.getSOPInstanceUID(),
|
||||
SeriesInstanceUID: series.getSeriesInstanceUID(),
|
||||
StudyInstanceUID: study.getStudyInstanceUID(),
|
||||
SeriesDate: ContentDate, // Map ContentDate/Time to SeriesTime for series list sorting.
|
||||
SeriesTime: ContentTime,
|
||||
SeriesNumber,
|
||||
};
|
||||
},
|
||||
};
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import React from 'react';
|
||||
import DicomMicroscopySopClassHandler from './DicomMicroscopySopClassHandler.js';
|
||||
import { version } from '../package.json';
|
||||
|
||||
const Component = React.lazy(() => {
|
||||
return import('./DicomMicroscopyViewport');
|
||||
@@ -18,6 +19,7 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'microscopy',
|
||||
version,
|
||||
|
||||
getViewportModule() {
|
||||
return DicomMicroscopyViewport;
|
||||
|
||||
@@ -3,6 +3,22 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.0.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@1.0.4...@ohif/extension-dicom-pdf@1.0.5) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-pdf
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.0.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@1.0.3...@ohif/extension-dicom-pdf@1.0.4) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-pdf
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.0.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@1.0.2...@ohif/extension-dicom-pdf@1.0.3) (2020-04-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-pdf
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-pdf",
|
||||
"version": "1.0.3",
|
||||
"version": "1.0.5",
|
||||
"description": "OHIF extension for Dicom PDF",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -12,6 +12,12 @@ const OHIFDicomPDFSopClassHandler = {
|
||||
getDisplaySetFromSeries(series, study, dicomWebClient, authorizationHeaders) {
|
||||
const instance = series.getFirstInstance();
|
||||
|
||||
const {
|
||||
ContentDate,
|
||||
ContentTime,
|
||||
SeriesNumber,
|
||||
} = instance._instance.metadata;
|
||||
|
||||
return {
|
||||
plugin: 'pdf',
|
||||
Modality: 'DOC',
|
||||
@@ -21,6 +27,9 @@ const OHIFDicomPDFSopClassHandler = {
|
||||
SOPInstanceUID: instance.getSOPInstanceUID(),
|
||||
SeriesInstanceUID: series.getSeriesInstanceUID(),
|
||||
StudyInstanceUID: study.getStudyInstanceUID(),
|
||||
SeriesDate: ContentDate, // Map ContentDate/Time to SeriesTime for series list sorting.
|
||||
SeriesTime: ContentTime,
|
||||
SeriesNumber,
|
||||
authorizationHeaders: authorizationHeaders,
|
||||
};
|
||||
},
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import React from 'react';
|
||||
import OHIFDicomPDFSopClassHandler from './OHIFDicomPDFSopClassHandler.js';
|
||||
import { version } from '../package.json';
|
||||
|
||||
const Component = React.lazy(() => {
|
||||
return import('./ConnectedOHIFDicomPDFViewer');
|
||||
@@ -18,6 +19,7 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'pdf',
|
||||
version,
|
||||
getViewportModule() {
|
||||
return ConnectedOHIFDicomPDFViewer;
|
||||
},
|
||||
|
||||
@@ -3,6 +3,68 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.4.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.2...@ohif/extension-dicom-rt@0.4.3) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-rt
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.1...@ohif/extension-dicom-rt@0.4.2) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-rt
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.0...@ohif/extension-dicom-rt@0.4.1) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-rt
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.3.0...@ohif/extension-dicom-rt@0.4.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.3.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.7...@ohif/extension-dicom-rt@0.3.0) (2020-08-10)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Add support for POINT and OPEN_PLANAR for RT ([0e87ab3](https://github.com/OHIF/Viewers/commit/0e87ab37c29fcf9af74bbcefca854c6e6b8707bc))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.2.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.6...@ohif/extension-dicom-rt@0.2.7) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-rt
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.2.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.5...@ohif/extension-dicom-rt@0.2.6) (2020-08-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-rt
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.2.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.4...@ohif/extension-dicom-rt@0.2.5) (2020-07-13)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-rt",
|
||||
"version": "0.2.5",
|
||||
"version": "0.4.3",
|
||||
"description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -30,8 +30,8 @@
|
||||
"peerDependencies": {
|
||||
"@ohif/core": "^0.50.0",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"dcmjs": "0.16.0",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"dcmjs": "0.16.3",
|
||||
"prop-types": "^15.6.2",
|
||||
"react": "^16.8.6",
|
||||
"react-dom": "^16.8.6"
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import { MODULE_TYPES, utils, DICOMWeb } from '@ohif/core';
|
||||
import loadRTStruct from './loadRTStruct';
|
||||
import getSourceDisplaySet from './getSourceDisplaySet';
|
||||
|
||||
import id from './id';
|
||||
|
||||
@@ -26,6 +27,7 @@ const OHIFDicomRTStructSopClassHandler = {
|
||||
const {
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
SeriesDescription,
|
||||
FrameOfReferenceUID,
|
||||
SOPInstanceUID,
|
||||
@@ -52,6 +54,7 @@ const OHIFDicomRTStructSopClassHandler = {
|
||||
isLoaded: false,
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
SeriesDescription,
|
||||
};
|
||||
|
||||
@@ -67,6 +70,10 @@ const OHIFDicomRTStructSopClassHandler = {
|
||||
}
|
||||
}
|
||||
|
||||
rtStructDisplaySet.getSourceDisplaySet = function(studies) {
|
||||
return getSourceDisplaySet(studies, rtStructDisplaySet);
|
||||
};
|
||||
|
||||
rtStructDisplaySet.load = function(referencedDisplaySet, studies) {
|
||||
return loadRTStruct(
|
||||
rtStructDisplaySet,
|
||||
|
||||
@@ -17,7 +17,6 @@ const { studyMetadataManager } = utils;
|
||||
|
||||
const refreshViewport = () => {
|
||||
cornerstone.getEnabledElements().forEach(enabledElement => {
|
||||
debugger;
|
||||
if (enabledElement.image) {
|
||||
cornerstone.updateImage(enabledElement.element);
|
||||
}
|
||||
@@ -40,7 +39,6 @@ const RTPanel = ({
|
||||
activeIndex,
|
||||
isOpen,
|
||||
onContourItemClick,
|
||||
noContoursNotification,
|
||||
activeContexts = [],
|
||||
contexts = {},
|
||||
}) => {
|
||||
@@ -126,7 +124,7 @@ const RTPanel = ({
|
||||
}, [isOpen]);
|
||||
|
||||
const toContourItem = (
|
||||
{ ROINumber, ROIName, RTROIObservations, colorArray, visible },
|
||||
{ ROINumber, ROIName, RTROIObservations, colorArray, visible, isSupported },
|
||||
loadedSet
|
||||
) => {
|
||||
let interpretedType = '';
|
||||
@@ -139,6 +137,7 @@ const RTPanel = ({
|
||||
<StructureSetItem
|
||||
key={ROINumber}
|
||||
selected={isSameContour}
|
||||
isDisabled={!isSupported}
|
||||
onClick={() => {
|
||||
setSelectedContour(isSameContour ? null : ROINumber);
|
||||
|
||||
@@ -160,12 +159,6 @@ const RTPanel = ({
|
||||
imageIds
|
||||
);
|
||||
|
||||
if (!imageId) {
|
||||
noContoursNotification();
|
||||
|
||||
return;
|
||||
}
|
||||
|
||||
const frameIndex = imageIds.indexOf(imageId);
|
||||
const SOPInstanceUID = cornerstone.metaData.get(
|
||||
'SOPInstanceUID',
|
||||
@@ -249,7 +242,7 @@ const RTPanel = ({
|
||||
key={SeriesInstanceUID}
|
||||
title={metadata.StructureSetLabel}
|
||||
loading={!isLoaded || !loadedSet}
|
||||
visible={isLoaded && loadedSet.visible}
|
||||
visible={isLoaded && loadedSet && loadedSet.visible}
|
||||
hideVisibleButton={!isLoaded}
|
||||
expanded={
|
||||
isLoaded &&
|
||||
|
||||
@@ -22,11 +22,6 @@
|
||||
width: 100%;
|
||||
}
|
||||
|
||||
.dcmrt-structure-set-item.selected .item-actions {
|
||||
height: 35px;
|
||||
visibility: visible;
|
||||
}
|
||||
|
||||
.dcmrt-structure-set-item .item-actions {
|
||||
margin-left: -1px;
|
||||
background-color: var(--ui-gray-darker);
|
||||
@@ -47,7 +42,8 @@
|
||||
transition: all 0.3s ease;
|
||||
}
|
||||
|
||||
.dcmrt-structure-set-item .item-actions .btnAction:hover, .dcmrt-structure-set-item .item-actions .btnAction:active {
|
||||
.dcmrt-structure-set-item .item-actions .btnAction:hover,
|
||||
.dcmrt-structure-set-item .item-actions .btnAction:active {
|
||||
color: var(--text-primary-color);
|
||||
}
|
||||
|
||||
@@ -86,3 +82,12 @@
|
||||
.dcmrt-structure-set-item .item-label .eye-icon.--visible {
|
||||
color: var(--default-color);
|
||||
}
|
||||
|
||||
.dcmrt-structure-set-item.isDisabled .item-color-section {
|
||||
background-color: #e29e4a;
|
||||
color: #fff;
|
||||
}
|
||||
|
||||
.dcmrt-structure-set-item.isDisabled .item-label {
|
||||
color: var(--text-disabled-color);
|
||||
}
|
||||
@@ -1,6 +1,6 @@
|
||||
import React, { useState, useEffect } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import { TableListItem, Icon } from '@ohif/ui';
|
||||
import { TableListItem, Icon, Tooltip, OverlayTrigger } from '@ohif/ui';
|
||||
|
||||
import './StructureSetItem.css';
|
||||
|
||||
@@ -20,6 +20,7 @@ ColoredCircle.propTypes = {
|
||||
const StructureSetItem = ({
|
||||
index,
|
||||
label,
|
||||
isDisabled,
|
||||
onClick,
|
||||
itemClass,
|
||||
color,
|
||||
@@ -31,22 +32,44 @@ const StructureSetItem = ({
|
||||
|
||||
useEffect(() => {
|
||||
setIsVisible(visible);
|
||||
}, [visible])
|
||||
}, [visible]);
|
||||
|
||||
return (
|
||||
<div className={`dcmrt-structure-set-item ${selected && 'selected'}`}>
|
||||
<TableListItem
|
||||
key={index}
|
||||
itemKey={index}
|
||||
itemIndex={index}
|
||||
itemClass={itemClass}
|
||||
itemMeta={<ColoredCircle color={color} />}
|
||||
itemMetaClass="item-color-section"
|
||||
onItemClick={onClick}
|
||||
>
|
||||
<div>
|
||||
<div className="item-label" style={{ marginBottom: 4 }}>
|
||||
<span>{label}</span>
|
||||
let dcmrtClassNames = `dcmrt-structure-set-item`;
|
||||
|
||||
if (selected) {
|
||||
dcmrtClassNames += ' selected';
|
||||
}
|
||||
|
||||
if (isDisabled) {
|
||||
dcmrtClassNames += ' isDisabled';
|
||||
}
|
||||
|
||||
const warningIcon = (
|
||||
<span>
|
||||
<Icon name="exclamation-triangle" />
|
||||
</span>
|
||||
);
|
||||
|
||||
const tableListItem = (
|
||||
<TableListItem
|
||||
key={index}
|
||||
itemKey={index}
|
||||
itemIndex={index}
|
||||
itemClass={itemClass}
|
||||
itemMeta={isDisabled ? warningIcon : <ColoredCircle color={color} />}
|
||||
itemMetaClass="item-color-section"
|
||||
onItemClick={() => {
|
||||
if (isDisabled) {
|
||||
return;
|
||||
}
|
||||
|
||||
onClick();
|
||||
}}
|
||||
>
|
||||
<div>
|
||||
<div className="item-label" style={{ marginBottom: 4 }}>
|
||||
<span>{label}</span>
|
||||
{!isDisabled && (
|
||||
<Icon
|
||||
className={`eye-icon ${isVisible && '--visible'}`}
|
||||
name={isVisible ? 'eye' : 'eye-closed'}
|
||||
@@ -54,37 +77,72 @@ const StructureSetItem = ({
|
||||
height="20px"
|
||||
onClick={event => {
|
||||
event.stopPropagation();
|
||||
|
||||
if (isDisabled) {
|
||||
return;
|
||||
}
|
||||
|
||||
const newVisibility = !isVisible;
|
||||
setIsVisible(newVisibility);
|
||||
onVisibilityChange(newVisibility);
|
||||
}}
|
||||
/>
|
||||
</div>
|
||||
{false && <div className="item-info">{'...'}</div>}
|
||||
{false && (
|
||||
<div className="item-actions">
|
||||
<button
|
||||
className="btnAction"
|
||||
onClick={() => console.log('Relabelling...')}
|
||||
>
|
||||
<span style={{ marginRight: '4px' }}>
|
||||
<Icon name="edit" width="14px" height="14px" />
|
||||
</span>
|
||||
Relabel
|
||||
</button>
|
||||
<button
|
||||
className="btnAction"
|
||||
onClick={() => console.log('Editing description...')}
|
||||
>
|
||||
<span style={{ marginRight: '4px' }}>
|
||||
<Icon name="edit" width="14px" height="14px" />
|
||||
</span>
|
||||
Description
|
||||
</button>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</TableListItem>
|
||||
|
||||
{false && <div className="item-info">{'...'}</div>}
|
||||
{false && (
|
||||
<div className="item-actions">
|
||||
<button
|
||||
className="btnAction"
|
||||
onClick={() => console.log('Relabelling...')}
|
||||
>
|
||||
<span style={{ marginRight: '4px' }}>
|
||||
<Icon name="edit" width="14px" height="14px" />
|
||||
</span>
|
||||
Relabel
|
||||
</button>
|
||||
<button
|
||||
className="btnAction"
|
||||
onClick={() => console.log('Editing description...')}
|
||||
>
|
||||
<span style={{ marginRight: '4px' }}>
|
||||
<Icon name="edit" width="14px" height="14px" />
|
||||
</span>
|
||||
Description
|
||||
</button>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</TableListItem>
|
||||
);
|
||||
|
||||
return (
|
||||
<div className={dcmrtClassNames}>
|
||||
<React.Fragment>
|
||||
{isDisabled ? (
|
||||
<OverlayTrigger
|
||||
key={index}
|
||||
placement="left"
|
||||
overlay={
|
||||
<Tooltip
|
||||
placement="left"
|
||||
className="in tooltip-warning"
|
||||
id="tooltip-left"
|
||||
>
|
||||
<div className="warningTitle">Unsupported Region</div>
|
||||
<div className="warningContent">
|
||||
Contour type currently unsupported.
|
||||
</div>
|
||||
</Tooltip>
|
||||
}
|
||||
>
|
||||
<div>{tableListItem}</div>
|
||||
</OverlayTrigger>
|
||||
) : (
|
||||
<React.Fragment>{tableListItem} </React.Fragment>
|
||||
)}
|
||||
</React.Fragment>
|
||||
</div>
|
||||
);
|
||||
};
|
||||
@@ -99,7 +157,7 @@ StructureSetItem.propTypes = {
|
||||
|
||||
StructureSetItem.defaultProps = {
|
||||
itemClass: '',
|
||||
onClick: () => { },
|
||||
onClick: () => {},
|
||||
};
|
||||
|
||||
export default StructureSetItem;
|
||||
@@ -0,0 +1,38 @@
|
||||
export default function getSourceDisplaySet(studies, rtStructDisplaySet) {
|
||||
const referencedDisplaySet = _getReferencedDisplaySet(
|
||||
rtStructDisplaySet,
|
||||
studies
|
||||
);
|
||||
|
||||
rtStructDisplaySet.load(referencedDisplaySet, studies);
|
||||
|
||||
return referencedDisplaySet;
|
||||
}
|
||||
|
||||
const _getReferencedDisplaySet = (rtStructDisplaySet, studies) => {
|
||||
let allDisplaySets = [];
|
||||
|
||||
studies.forEach(study => {
|
||||
allDisplaySets = allDisplaySets.concat(study.displaySets);
|
||||
});
|
||||
|
||||
const otherDisplaySets = allDisplaySets.filter(
|
||||
ds => ds.displaySetInstanceUID !== rtStructDisplaySet.displaySetInstanceUID
|
||||
);
|
||||
|
||||
const ReferencedSeriesSequence = Array.isArray(
|
||||
rtStructDisplaySet.metadata.ReferencedSeriesSequence
|
||||
)
|
||||
? rtStructDisplaySet.metadata.ReferencedSeriesSequence
|
||||
: [rtStructDisplaySet.metadata.ReferencedSeriesSequence];
|
||||
|
||||
const referencedSeriesInstanceUIDs = ReferencedSeriesSequence.map(
|
||||
ReferencedSeries => ReferencedSeries.SeriesInstanceUID
|
||||
);
|
||||
|
||||
const referencedDisplaySet = otherDisplaySets.find(ds =>
|
||||
referencedSeriesInstanceUIDs.includes(ds.SeriesInstanceUID)
|
||||
);
|
||||
|
||||
return referencedDisplaySet;
|
||||
};
|
||||
@@ -1,15 +1,16 @@
|
||||
import React from 'react';
|
||||
|
||||
import init from './init.js';
|
||||
import sopClassHandlerModule from './OHIFDicomRTStructSopClassHandler';
|
||||
import id from './id.js';
|
||||
import RTPanel from './components/RTPanel/RTPanel';
|
||||
import { version } from '../package.json';
|
||||
|
||||
export default {
|
||||
/**
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id,
|
||||
version,
|
||||
|
||||
/**
|
||||
*
|
||||
@@ -21,20 +22,9 @@ export default {
|
||||
init({ servicesManager, configuration });
|
||||
},
|
||||
getPanelModule({ commandsManager, servicesManager, api }) {
|
||||
const { UINotificationService } = servicesManager.services;
|
||||
|
||||
const ExtendedRTPanel = props => {
|
||||
const { activeContexts } = api.hooks.useAppContext();
|
||||
|
||||
const noContoursNotificationHandler = () => {
|
||||
UINotificationService.show({
|
||||
title: 'ROI Contour empty',
|
||||
message: 'The ROI contour has no structure set data.',
|
||||
type: 'error',
|
||||
autoClose: false,
|
||||
});
|
||||
};
|
||||
|
||||
const contourItemClickHandler = contourData => {
|
||||
commandsManager.runCommand('jumpToImage', contourData);
|
||||
};
|
||||
@@ -45,7 +35,6 @@ export default {
|
||||
onContourItemClick={contourItemClickHandler}
|
||||
activeContexts={activeContexts}
|
||||
contexts={api.contexts}
|
||||
noContoursNotification={noContoursNotificationHandler}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
@@ -74,26 +74,17 @@ export default async function loadRTStruct(
|
||||
continue;
|
||||
}
|
||||
|
||||
_setROIContourMetadata(
|
||||
structureSet,
|
||||
StructureSetROISequence,
|
||||
RTROIObservationsSequence,
|
||||
ROIContour
|
||||
);
|
||||
const isSupported = false;
|
||||
|
||||
for (let c = 0; c < ContourSequence.length; c++) {
|
||||
const ContourSequenceArray = _toArray(ContourSequence);
|
||||
|
||||
for (let c = 0; c < ContourSequenceArray.length; c++) {
|
||||
const {
|
||||
ContourImageSequence,
|
||||
ContourData,
|
||||
NumberOfContourPoints,
|
||||
ContourGeometricType,
|
||||
} = ContourSequence[c];
|
||||
|
||||
if (ContourGeometricType !== 'CLOSED_PLANAR') {
|
||||
// TODO: Do we want to visualise types other than closed planar?
|
||||
// We could easily do open planar.
|
||||
continue;
|
||||
}
|
||||
} = ContourSequenceArray[c];
|
||||
|
||||
const sopInstanceUID = ContourImageSequence.ReferencedSOPInstanceUID;
|
||||
const imageId = _getImageId(imageIdSopInstanceUidPairs, sopInstanceUID);
|
||||
@@ -105,27 +96,47 @@ export default async function loadRTStruct(
|
||||
|
||||
const imagePlane = cornerstone.metaData.get('imagePlaneModule', imageId);
|
||||
const points = [];
|
||||
let measurementData;
|
||||
|
||||
for (let p = 0; p < NumberOfContourPoints * 3; p += 3) {
|
||||
points.push({
|
||||
x: ContourData[p],
|
||||
y: ContourData[p + 1],
|
||||
z: ContourData[p + 2],
|
||||
});
|
||||
switch (ContourGeometricType) {
|
||||
case 'CLOSED_PLANAR':
|
||||
case 'OPEN_PLANAR':
|
||||
case 'POINT':
|
||||
isSupported = true;
|
||||
|
||||
for (let p = 0; p < NumberOfContourPoints * 3; p += 3) {
|
||||
points.push({
|
||||
x: ContourData[p],
|
||||
y: ContourData[p + 1],
|
||||
z: ContourData[p + 2],
|
||||
});
|
||||
}
|
||||
|
||||
transformPointsToImagePlane(points, imagePlane);
|
||||
|
||||
measurementData = {
|
||||
handles: {
|
||||
points,
|
||||
},
|
||||
type: ContourGeometricType,
|
||||
structureSetSeriesInstanceUid: rtStructDataset.SeriesInstanceUID,
|
||||
ROINumber: ReferencedROINumber,
|
||||
};
|
||||
|
||||
imageIdSpecificToolData.push(measurementData);
|
||||
break;
|
||||
default:
|
||||
continue;
|
||||
}
|
||||
|
||||
transformPointsToImagePlane(points, imagePlane);
|
||||
|
||||
const measurementData = {
|
||||
handles: {
|
||||
points,
|
||||
},
|
||||
structureSetSeriesInstanceUid: rtStructDataset.SeriesInstanceUID,
|
||||
ROINumber: ReferencedROINumber,
|
||||
};
|
||||
|
||||
imageIdSpecificToolData.push(measurementData);
|
||||
}
|
||||
|
||||
_setROIContourMetadata(
|
||||
structureSet,
|
||||
StructureSetROISequence,
|
||||
RTROIObservationsSequence,
|
||||
ROIContour,
|
||||
isSupported
|
||||
);
|
||||
}
|
||||
|
||||
_setToolEnabledIfNotEnabled(rtStructDisplayToolName);
|
||||
@@ -155,7 +166,8 @@ function _setROIContourMetadata(
|
||||
structureSet,
|
||||
StructureSetROISequence,
|
||||
RTROIObservationsSequence,
|
||||
ROIContour
|
||||
ROIContour,
|
||||
isSupported
|
||||
) {
|
||||
const StructureSetROI = StructureSetROISequence.find(
|
||||
structureSetROI =>
|
||||
@@ -167,6 +179,7 @@ function _setROIContourMetadata(
|
||||
ROIName: StructureSetROI.ROIName,
|
||||
ROIGenerationAlgorithm: StructureSetROI.ROIGenerationAlgorithm,
|
||||
ROIDescription: StructureSetROI.ROIDescription,
|
||||
isSupported,
|
||||
visible: true,
|
||||
};
|
||||
|
||||
@@ -307,3 +320,7 @@ function _getImageIdSopInstanceUidPairsForDisplaySet(
|
||||
};
|
||||
});
|
||||
}
|
||||
|
||||
function _toArray(objOrArray) {
|
||||
return Array.isArray(objOrArray) ? objOrArray : [objOrArray];
|
||||
}
|
||||
@@ -4,6 +4,7 @@ import TOOL_NAMES from '../utils/toolNames';
|
||||
|
||||
// Cornerstone 3rd party dev kit imports
|
||||
const draw = importInternal('drawing/draw');
|
||||
const drawCircle = importInternal('drawing/drawCircle');
|
||||
const drawJoinedLines = importInternal('drawing/drawJoinedLines');
|
||||
const getNewContext = importInternal('drawing/getNewContext');
|
||||
const BaseTool = importInternal('base/BaseTool');
|
||||
@@ -72,22 +73,52 @@ export default class RTStructDisplayTool extends BaseTool {
|
||||
const colorArray = ROIContourData.colorArray;
|
||||
const color = `rgba(${colorArray[0]},${colorArray[1]},${
|
||||
colorArray[2]
|
||||
},${opacity})`;
|
||||
},${opacity})`;
|
||||
|
||||
lineWidth;
|
||||
|
||||
draw(context, context => {
|
||||
drawJoinedLines(
|
||||
context,
|
||||
eventData.element,
|
||||
points[points.length - 1],
|
||||
points,
|
||||
{
|
||||
switch (data.type) {
|
||||
case 'CLOSED_PLANAR':
|
||||
this._renderClosedPlanar(context, eventData.element, points, {
|
||||
color,
|
||||
lineWidth,
|
||||
}
|
||||
);
|
||||
});
|
||||
});
|
||||
break;
|
||||
case 'POINT':
|
||||
this._renderPoint(context, eventData.element, points, {
|
||||
color,
|
||||
lineWidth,
|
||||
});
|
||||
break;
|
||||
case 'OPEN_PLANAR':
|
||||
this._renderOpenPlanar(context, eventData.element, points, {
|
||||
color,
|
||||
lineWidth,
|
||||
});
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
_renderClosedPlanar(context, element, points, options) {
|
||||
draw(context, context => {
|
||||
drawJoinedLines(
|
||||
context,
|
||||
element,
|
||||
points[points.length - 1],
|
||||
points,
|
||||
options
|
||||
);
|
||||
});
|
||||
}
|
||||
|
||||
_renderPoint(context, element, points, options) {
|
||||
draw(context, context => {
|
||||
drawCircle(context, element, points[0], 3, options);
|
||||
});
|
||||
}
|
||||
|
||||
_renderOpenPlanar(context, element, points, options) {
|
||||
draw(context, context => {
|
||||
drawJoinedLines(context, element, points[0], points, options);
|
||||
});
|
||||
}
|
||||
}
|
||||
@@ -3,6 +3,49 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.4.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.4.2...@ohif/extension-dicom-segmentation@0.4.3) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-segmentation
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.4.1...@ohif/extension-dicom-segmentation@0.4.2) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-segmentation
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.4.0...@ohif/extension-dicom-segmentation@0.4.1) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-segmentation
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.4...@ohif/extension-dicom-segmentation@0.4.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.3.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.3...@ohif/extension-dicom-segmentation@0.3.4) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-segmentation
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.3.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.2...@ohif/extension-dicom-segmentation@0.3.3) (2020-07-13)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-dicom-segmentation
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-segmentation",
|
||||
"version": "0.3.3",
|
||||
"version": "0.4.3",
|
||||
"description": "OHIF extension for viewing segmentations in the 2D MPR view",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -30,8 +30,8 @@
|
||||
"peerDependencies": {
|
||||
"@ohif/core": "^0.50.0",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"dcmjs": "0.16.0",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"dcmjs": "0.16.3",
|
||||
"prop-types": "^15.6.2",
|
||||
"react": "^16.8.6",
|
||||
"react-dom": "^16.8.6"
|
||||
|
||||
+48
-85
@@ -6,6 +6,9 @@ import moment from 'moment';
|
||||
import { utils, log } from '@ohif/core';
|
||||
import { ScrollableArea, TableList, Icon } from '@ohif/ui';
|
||||
|
||||
import setActiveLabelmap from '../../utils/setActiveLabelMap';
|
||||
import refreshViewports from '../../utils/refreshViewports';
|
||||
|
||||
import {
|
||||
BrushColorSelector,
|
||||
BrushRadius,
|
||||
@@ -19,12 +22,6 @@ import SegmentationSettings from '../SegmentationSettings/SegmentationSettings';
|
||||
|
||||
const { studyMetadataManager } = utils;
|
||||
|
||||
const refreshViewport = () => {
|
||||
cornerstone.getEnabledElements().forEach(enabledElement => {
|
||||
cornerstone.updateImage(enabledElement.element);
|
||||
});
|
||||
};
|
||||
|
||||
/**
|
||||
* SegmentationPanel component
|
||||
*
|
||||
@@ -68,8 +65,7 @@ const SegmentationPanel = ({
|
||||
*/
|
||||
const [state, setState] = useState({
|
||||
brushRadius: DEFAULT_BRUSH_RADIUS,
|
||||
brushColor:
|
||||
'rgba(221, 85, 85, 1)',
|
||||
brushColor: 'rgba(221, 85, 85, 1)',
|
||||
selectedSegment: null,
|
||||
selectedSegmentation: null,
|
||||
showSegmentationSettings: false,
|
||||
@@ -78,7 +74,7 @@ const SegmentationPanel = ({
|
||||
segmentList: [],
|
||||
cachedSegmentsProperties: [],
|
||||
isLoading: false,
|
||||
isDisabled: true
|
||||
isDisabled: true,
|
||||
});
|
||||
|
||||
useEffect(() => {
|
||||
@@ -112,7 +108,10 @@ const SegmentationPanel = ({
|
||||
* allows us to easily watch the module or the segmentations loading process in any other component
|
||||
* without subscribing to external events.
|
||||
*/
|
||||
document.addEventListener('extensiondicomsegmentationsegloaded', refreshSegmentations);
|
||||
document.addEventListener(
|
||||
'extensiondicomsegmentationsegloaded',
|
||||
refreshSegmentations
|
||||
);
|
||||
|
||||
/*
|
||||
* These are specific to each element;
|
||||
@@ -127,7 +126,10 @@ const SegmentationPanel = ({
|
||||
);
|
||||
|
||||
return () => {
|
||||
document.removeEventListener('extensiondicomsegmentationsegloaded', refreshSegmentations);
|
||||
document.removeEventListener(
|
||||
'extensiondicomsegmentationsegloaded',
|
||||
refreshSegmentations
|
||||
);
|
||||
cornerstoneTools.store.state.enabledElements.forEach(enabledElement =>
|
||||
enabledElement.removeEventListener(
|
||||
'cornerstonetoolslabelmapmodified',
|
||||
@@ -169,26 +171,29 @@ const SegmentationPanel = ({
|
||||
selectedSegmentation: brushStackState.activeLabelmapIndex,
|
||||
labelmapList,
|
||||
segmentList,
|
||||
isDisabled
|
||||
isDisabled,
|
||||
}));
|
||||
} else {
|
||||
setState(state => ({
|
||||
...state,
|
||||
labelmapList: [],
|
||||
segmentList: [],
|
||||
isDisabled
|
||||
isDisabled,
|
||||
}));
|
||||
}
|
||||
}
|
||||
}, [
|
||||
viewports,
|
||||
activeIndex,
|
||||
state.isLoading
|
||||
]);
|
||||
}, [viewports, activeIndex, state.isLoading]);
|
||||
|
||||
useEffect(() => {
|
||||
refreshSegmentations();
|
||||
}, [viewports, activeIndex, isOpen, state.selectedSegmentation, activeContexts, state.isLoading]);
|
||||
}, [
|
||||
viewports,
|
||||
activeIndex,
|
||||
isOpen,
|
||||
state.selectedSegmentation,
|
||||
activeContexts,
|
||||
state.isLoading,
|
||||
]);
|
||||
|
||||
/* Handle open/closed panel behaviour */
|
||||
useEffect(() => {
|
||||
@@ -223,12 +228,10 @@ const SegmentationPanel = ({
|
||||
title: displayDescription,
|
||||
description: displayDate,
|
||||
onClick: async () => {
|
||||
const activatedLabelmapIndex = await _setActiveLabelmap(
|
||||
const activatedLabelmapIndex = await setActiveLabelmap(
|
||||
activeViewport,
|
||||
studies,
|
||||
displaySet,
|
||||
firstImageId,
|
||||
brushStackState.activeLabelmapIndex,
|
||||
() => onSelectedSegmentationChange(),
|
||||
onDisplaySetLoadFailure
|
||||
);
|
||||
@@ -376,9 +379,13 @@ const SegmentationPanel = ({
|
||||
return !segmentsHidden[segmentIndex];
|
||||
};
|
||||
|
||||
const cachedSegmentProperties = state.cachedSegmentsProperties[segmentNumber];
|
||||
const cachedSegmentProperties =
|
||||
state.cachedSegmentsProperties[segmentNumber];
|
||||
let visible = isSegmentVisible();
|
||||
if (cachedSegmentProperties && cachedSegmentProperties.visible !== visible) {
|
||||
if (
|
||||
cachedSegmentProperties &&
|
||||
cachedSegmentProperties.visible !== visible
|
||||
) {
|
||||
toggleSegmentVisibility();
|
||||
}
|
||||
|
||||
@@ -406,8 +413,10 @@ const SegmentationPanel = ({
|
||||
onSegmentVisibilityChange(segmentNumber, newVisibility);
|
||||
}
|
||||
|
||||
updateCachedSegmentsProperties(segmentNumber, { visible: newVisibility });
|
||||
refreshViewport();
|
||||
updateCachedSegmentsProperties(segmentNumber, {
|
||||
visible: newVisibility,
|
||||
});
|
||||
refreshViewports();
|
||||
}}
|
||||
/>
|
||||
);
|
||||
@@ -429,10 +438,9 @@ const SegmentationPanel = ({
|
||||
const segmentsProperties = state.cachedSegmentsProperties;
|
||||
const segmentProperties = state.cachedSegmentsProperties[segmentNumber];
|
||||
|
||||
segmentsProperties[segmentNumber] =
|
||||
segmentProperties ?
|
||||
{ ...segmentProperties, ...properties } :
|
||||
properties;
|
||||
segmentsProperties[segmentNumber] = segmentProperties
|
||||
? { ...segmentProperties, ...properties }
|
||||
: properties;
|
||||
|
||||
updateState('cachedSegmentsProperties', segmentsProperties);
|
||||
};
|
||||
@@ -499,10 +507,13 @@ const SegmentationPanel = ({
|
||||
configuration.fillAlphaInactive = newConfiguration.fillAlphaInactive;
|
||||
configuration.outlineAlphaInactive = newConfiguration.outlineAlphaInactive;
|
||||
onConfigurationChange(newConfiguration);
|
||||
refreshViewport();
|
||||
refreshViewports();
|
||||
};
|
||||
|
||||
const disabledConfigurationFields = ['outlineAlpha', 'shouldRenderInactiveLabelmaps'];
|
||||
const disabledConfigurationFields = [
|
||||
'outlineAlpha',
|
||||
'shouldRenderInactiveLabelmaps',
|
||||
];
|
||||
if (state.showSegmentationSettings) {
|
||||
return (
|
||||
<SegmentationSettings
|
||||
@@ -514,7 +525,10 @@ const SegmentationPanel = ({
|
||||
);
|
||||
} else {
|
||||
return (
|
||||
<div className={`dcmseg-segmentation-panel ${state.isDisabled && 'disabled'}`}>
|
||||
<div
|
||||
className={`dcmseg-segmentation-panel ${state.isDisabled &&
|
||||
'disabled'}`}
|
||||
>
|
||||
<Icon
|
||||
className="cog-icon"
|
||||
name="cog"
|
||||
@@ -613,57 +627,6 @@ const _getReferencedSegDisplaysets = (StudyInstanceUID, SeriesInstanceUID) => {
|
||||
return referencedDisplaysets;
|
||||
};
|
||||
|
||||
/**
|
||||
*
|
||||
*
|
||||
* @param {*} viewportSpecificData
|
||||
* @param {*} studies
|
||||
* @param {*} displaySet
|
||||
* @param {*} firstImageId
|
||||
* @param {*} activeLabelmapIndex
|
||||
* @returns
|
||||
*/
|
||||
const _setActiveLabelmap = async (
|
||||
viewportSpecificData,
|
||||
studies,
|
||||
displaySet,
|
||||
firstImageId,
|
||||
activeLabelmapIndex,
|
||||
callback = () => { },
|
||||
onDisplaySetLoadFailure
|
||||
) => {
|
||||
if (displaySet.labelmapIndex === activeLabelmapIndex) {
|
||||
log.warn(`${activeLabelmapIndex} is already the active labelmap`);
|
||||
return displaySet.labelmapIndex;
|
||||
}
|
||||
|
||||
if (!displaySet.isLoaded) {
|
||||
// What props does this expect `viewportSpecificData` to have?
|
||||
// TODO: Should this return the `labelmapIndex`?
|
||||
|
||||
const loadPromise = displaySet.load(viewportSpecificData, studies);
|
||||
|
||||
loadPromise.catch(error => {
|
||||
onDisplaySetLoadFailure(error);
|
||||
|
||||
// Return old index.
|
||||
return activeLabelmapIndex;
|
||||
});
|
||||
|
||||
await loadPromise;
|
||||
}
|
||||
|
||||
const { state } = cornerstoneTools.getModule('segmentation');
|
||||
const brushStackState = state.series[firstImageId];
|
||||
brushStackState.activeLabelmapIndex = displaySet.labelmapIndex;
|
||||
|
||||
refreshViewport();
|
||||
|
||||
callback();
|
||||
|
||||
return displaySet.labelmapIndex;
|
||||
};
|
||||
|
||||
/**
|
||||
*
|
||||
* @param {*} firstImageId
|
||||
@@ -683,7 +646,7 @@ const _setActiveSegment = (firstImageId, segmentIndex, activeSegmentIndex) => {
|
||||
brushStackState.labelmaps3D[brushStackState.activeLabelmapIndex];
|
||||
labelmap3D.activeSegmentIndex = segmentIndex;
|
||||
|
||||
refreshViewport();
|
||||
refreshViewports();
|
||||
|
||||
return segmentIndex;
|
||||
};
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import { MODULE_TYPES, utils } from '@ohif/core';
|
||||
import loadSegmentation from './loadSegmentation';
|
||||
import getSourceDisplaySet from './getSourceDisplaySet';
|
||||
|
||||
// TODO: Should probably use dcmjs for this
|
||||
const SOP_CLASS_UIDS = {
|
||||
@@ -27,6 +28,7 @@ export default function getSopClassHandlerModule({ servicesManager }) {
|
||||
const {
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
SeriesDescription,
|
||||
FrameOfReferenceUID,
|
||||
SOPInstanceUID,
|
||||
@@ -51,9 +53,14 @@ export default function getSopClassHandlerModule({ servicesManager }) {
|
||||
isLoaded: false,
|
||||
SeriesDate,
|
||||
SeriesTime,
|
||||
SeriesNumber,
|
||||
SeriesDescription,
|
||||
};
|
||||
|
||||
segDisplaySet.getSourceDisplaySet = function(studies) {
|
||||
return getSourceDisplaySet(studies, segDisplaySet);
|
||||
};
|
||||
|
||||
segDisplaySet.load = function(referencedDisplaySet, studies) {
|
||||
return loadSegmentation(segDisplaySet, referencedDisplaySet, studies);
|
||||
};
|
||||
|
||||
@@ -0,0 +1,88 @@
|
||||
import setActiveLabelmap from './utils/setActiveLabelMap';
|
||||
import { classes } from '@ohif/core';
|
||||
|
||||
const { ImageSet } = classes;
|
||||
|
||||
export default function getSourceDisplaySet(studies, segDisplaySet) {
|
||||
const referencedDisplaySet = _getReferencedDisplaySet(segDisplaySet, studies);
|
||||
|
||||
setActiveLabelmap(referencedDisplaySet, studies, segDisplaySet);
|
||||
|
||||
return referencedDisplaySet;
|
||||
}
|
||||
|
||||
const _getReferencedDisplaySet = (segDisplaySet, studies) => {
|
||||
let allDisplaySets = [];
|
||||
|
||||
studies.forEach(study => {
|
||||
allDisplaySets = allDisplaySets.concat(study.displaySets);
|
||||
});
|
||||
|
||||
const otherDisplaySets = allDisplaySets.filter(
|
||||
ds => ds.displaySetInstanceUID !== segDisplaySet.displaySetInstanceUID
|
||||
);
|
||||
|
||||
const { metadata } = segDisplaySet;
|
||||
|
||||
let referencedSeriesInstanceUIDs;
|
||||
|
||||
if (metadata.ReferencedSeriesSequence) {
|
||||
const ReferencedSeriesSequence = _toArray(
|
||||
metadata.ReferencedSeriesSequence
|
||||
);
|
||||
|
||||
referencedSeriesInstanceUIDs = ReferencedSeriesSequence.map(
|
||||
ReferencedSeries => ReferencedSeries.SeriesInstanceUID
|
||||
);
|
||||
} else {
|
||||
const { PerFrameFunctionalGroupsSequence } = metadata;
|
||||
|
||||
let SourceImageSequence;
|
||||
|
||||
if (metadata.SourceImageSequence) {
|
||||
SourceImageSequence = metadata.SourceImageSequence;
|
||||
} else {
|
||||
const firstFunctionalGroups = _toArray(
|
||||
PerFrameFunctionalGroupsSequence
|
||||
)[0];
|
||||
const { DerivationImageSequence } = firstFunctionalGroups;
|
||||
|
||||
SourceImageSequence = DerivationImageSequence;
|
||||
}
|
||||
|
||||
const firstSourceImage = _toArray(SourceImageSequence)[0];
|
||||
|
||||
const { ReferencedSOPInstanceUID } = firstSourceImage;
|
||||
|
||||
referencedSeriesInstanceUIDs = _findReferencedSeriesInstanceUIDsFromSOPInstanceUID(
|
||||
otherDisplaySets,
|
||||
ReferencedSOPInstanceUID
|
||||
);
|
||||
}
|
||||
|
||||
const referencedDisplaySet = otherDisplaySets.find(ds =>
|
||||
referencedSeriesInstanceUIDs.includes(ds.SeriesInstanceUID)
|
||||
);
|
||||
|
||||
return referencedDisplaySet;
|
||||
};
|
||||
|
||||
const _findReferencedSeriesInstanceUIDsFromSOPInstanceUID = (
|
||||
displaySets,
|
||||
SOPInstanceUID
|
||||
) => {
|
||||
const imageSets = displaySets.filter(ds => ds instanceof ImageSet);
|
||||
|
||||
for (let i = 0; i < imageSets.length; i++) {
|
||||
const { images } = imageSets[i];
|
||||
for (let j = 0; j < images.length; j++) {
|
||||
if (images[j].SOPInstanceUID === SOPInstanceUID) {
|
||||
return [images[j].getData().metadata.SeriesInstanceUID];
|
||||
}
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
function _toArray(arrayOrObject) {
|
||||
return Array.isArray(arrayOrObject) ? arrayOrObject : [arrayOrObject];
|
||||
}
|
||||
@@ -1,15 +1,16 @@
|
||||
import React from 'react';
|
||||
|
||||
import init from './init.js';
|
||||
import toolbarModule from './toolbarModule.js';
|
||||
import getSopClassHandlerModule from './getOHIFDicomSegSopClassHandler.js';
|
||||
import SegmentationPanel from './components/SegmentationPanel/SegmentationPanel.js';
|
||||
import { version } from '../package.json';
|
||||
|
||||
export default {
|
||||
/**
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'com.ohif.dicom-segmentation',
|
||||
version,
|
||||
|
||||
/**
|
||||
*
|
||||
|
||||
@@ -0,0 +1,5 @@
|
||||
export default function refreshViewports() {
|
||||
cornerstone.getEnabledElements().forEach(enabledElement => {
|
||||
cornerstone.updateImage(enabledElement.element);
|
||||
});
|
||||
}
|
||||
@@ -0,0 +1,67 @@
|
||||
import { utils, log } from '@ohif/core';
|
||||
import cornerstoneTools from 'cornerstone-tools';
|
||||
import refreshViewports from './refreshViewports';
|
||||
|
||||
const { studyMetadataManager } = utils;
|
||||
|
||||
/**
|
||||
*
|
||||
*
|
||||
* @param {*} viewportSpecificData
|
||||
* @param {*} studies
|
||||
* @param {*} displaySet
|
||||
* @param {*} firstImageId
|
||||
* @param {*} activeLabelmapIndex
|
||||
* @returns
|
||||
*/
|
||||
export default async function setActiveLabelmap(
|
||||
referencedDisplaySet,
|
||||
studies,
|
||||
displaySet,
|
||||
callback = () => {},
|
||||
onDisplaySetLoadFailure = err => {
|
||||
throw new Error(err.message);
|
||||
}
|
||||
) {
|
||||
const studyMetadata = studyMetadataManager.get(
|
||||
referencedDisplaySet.StudyInstanceUID
|
||||
);
|
||||
const firstImageId = studyMetadata.getFirstImageId(
|
||||
referencedDisplaySet.displaySetInstanceUID
|
||||
);
|
||||
|
||||
let { state } = cornerstoneTools.getModule('segmentation');
|
||||
|
||||
let brushStackState = state.series[firstImageId];
|
||||
const activeLabelmapIndex = brushStackState
|
||||
? brushStackState.activeLabelmapIndex
|
||||
: undefined;
|
||||
|
||||
if (displaySet.labelmapIndex === activeLabelmapIndex) {
|
||||
log.warn(`${activeLabelmapIndex} is already the active labelmap`);
|
||||
return displaySet.labelmapIndex;
|
||||
}
|
||||
|
||||
if (!displaySet.isLoaded) {
|
||||
const loadPromise = displaySet.load(referencedDisplaySet, studies);
|
||||
|
||||
loadPromise.catch(error => {
|
||||
onDisplaySetLoadFailure(error);
|
||||
|
||||
// Return old index.
|
||||
return activeLabelmapIndex;
|
||||
});
|
||||
|
||||
await loadPromise;
|
||||
}
|
||||
|
||||
// This might have just been created, so need to use the non-cached value.
|
||||
state = cornerstoneTools.getModule('segmentation').state;
|
||||
brushStackState = state.series[firstImageId];
|
||||
brushStackState.activeLabelmapIndex = displaySet.labelmapIndex;
|
||||
|
||||
refreshViewports();
|
||||
callback();
|
||||
|
||||
return displaySet.labelmapIndex;
|
||||
}
|
||||
@@ -3,6 +3,14 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.2.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-lesion-tracker@0.2.0...@ohif/extension-lesion-tracker@0.2.1) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-lesion-tracker
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.2.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-lesion-tracker@0.1.0...@ohif/extension-lesion-tracker@0.2.0) (2020-02-10)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-lesion-tracker",
|
||||
"version": "0.2.0",
|
||||
"version": "0.2.1",
|
||||
"description": "OHIF extension for Lesion Tracker",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -1,10 +1,12 @@
|
||||
import MeasurementComparisonTable from './components/MeasurementComparisonTable';
|
||||
import { version } from '../package.json';
|
||||
|
||||
export default {
|
||||
/**
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'lesion-tracker',
|
||||
version,
|
||||
|
||||
/**
|
||||
* @param {object} params
|
||||
@@ -26,7 +28,7 @@ export default {
|
||||
component: MeasurementComparisonTable,
|
||||
},
|
||||
],
|
||||
defaultContext: ['VIEWER']
|
||||
defaultContext: ['VIEWER'],
|
||||
};
|
||||
},
|
||||
|
||||
|
||||
@@ -3,6 +3,68 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.7.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.3...@ohif/extension-vtk@1.7.4) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.7.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.2...@ohif/extension-vtk@1.7.3) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.7.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.1...@ohif/extension-vtk@1.7.2) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.7.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.0...@ohif/extension-vtk@1.7.1) (2020-08-24)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Fail gracefully on an MPR load error ([#1992](https://github.com/OHIF/Viewers/issues/1992)) ([779a7e0](https://github.com/OHIF/Viewers/commit/779a7e0976aa3a2d2bf1dc8f056950f0545c9fff))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.7.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.10...@ohif/extension-vtk@1.7.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.6.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.9...@ohif/extension-vtk@1.6.10) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.6.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.8...@ohif/extension-vtk@1.6.9) (2020-07-23)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.6.8](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.7...@ohif/extension-vtk@1.6.8) (2020-07-22)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-vtk",
|
||||
"version": "1.6.8",
|
||||
"version": "1.7.4",
|
||||
"description": "OHIF extension for VTK.js",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -33,9 +33,9 @@
|
||||
"@ohif/i18n": "^0.50.0",
|
||||
"@ohif/ui": "^0.50.0",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "0.16.0",
|
||||
"dcmjs": "0.16.3",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"i18next": "^17.0.3",
|
||||
"i18next-browser-languagedetector": "^3.0.1",
|
||||
@@ -50,12 +50,12 @@
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"lodash.throttle": "^4.1.1",
|
||||
"react-vtkjs-viewport": "^0.9.0"
|
||||
"react-vtkjs-viewport": "^0.10.4"
|
||||
},
|
||||
"devDependencies": {
|
||||
"@ohif/core": "^2.9.13",
|
||||
"@ohif/ui": "^1.5.2",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"@ohif/core": "^2.10.3",
|
||||
"@ohif/ui": "^1.5.3",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"gh-pages": "^2.0.1",
|
||||
|
||||
@@ -32,16 +32,16 @@ class LoadingIndicator extends PureComponent {
|
||||
</div>
|
||||
</div>
|
||||
) : (
|
||||
<div className="imageViewerLoadingIndicator loadingIndicator">
|
||||
<div className="indicatorContents">
|
||||
<p>
|
||||
{this.props.t('Loading...')}
|
||||
<i className="fa fa-spin fa-circle-o-notch fa-fw" />
|
||||
{percComplete}
|
||||
</p>
|
||||
</div>
|
||||
<div className="imageViewerLoadingIndicator loadingIndicator">
|
||||
<div className="indicatorContents">
|
||||
<p>
|
||||
{this.props.t('Loading...')}
|
||||
<i className="fa fa-spin fa-circle-o-notch fa-fw" />
|
||||
{percComplete}
|
||||
</p>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
)}
|
||||
</React.Fragment>
|
||||
);
|
||||
}
|
||||
|
||||
@@ -49,27 +49,30 @@ class OHIFVTKViewport extends Component {
|
||||
state = {
|
||||
volumes: null,
|
||||
paintFilterLabelMapImageData: null,
|
||||
paintFilterBackgroundImageData: null
|
||||
paintFilterBackgroundImageData: null,
|
||||
percentComplete: 0,
|
||||
isLoaded: false,
|
||||
};
|
||||
|
||||
static propTypes = {
|
||||
viewportData: PropTypes.shape({
|
||||
studies: PropTypes.array,
|
||||
studies: PropTypes.array.isRequired,
|
||||
displaySet: PropTypes.shape({
|
||||
StudyInstanceUID: PropTypes.string,
|
||||
displaySetInstanceUID: PropTypes.string,
|
||||
StudyInstanceUID: PropTypes.string.isRequired,
|
||||
displaySetInstanceUID: PropTypes.string.isRequired,
|
||||
sopClassUIDs: PropTypes.arrayOf(PropTypes.string),
|
||||
SOPInstanceUID: PropTypes.string,
|
||||
frameIndex: PropTypes.number,
|
||||
}),
|
||||
}),
|
||||
viewportIndex: PropTypes.number,
|
||||
viewportIndex: PropTypes.number.isRequired,
|
||||
children: PropTypes.node,
|
||||
onScroll: PropTypes.func,
|
||||
servicesManager: PropTypes.object.isRequired,
|
||||
};
|
||||
|
||||
static defaultProps = {
|
||||
onScroll: () => { },
|
||||
onScroll: () => {},
|
||||
};
|
||||
|
||||
static id = 'OHIFVTKViewport';
|
||||
@@ -156,9 +159,11 @@ class OHIFVTKViewport extends Component {
|
||||
const { activeLabelmapIndex } = brushStackState;
|
||||
const labelmap3D = brushStackState.labelmaps3D[activeLabelmapIndex];
|
||||
|
||||
this.segmentsDefaultProperties = labelmap3D.segmentsHidden.map(isHidden => {
|
||||
return { visible: !isHidden };
|
||||
});
|
||||
this.segmentsDefaultProperties = labelmap3D.segmentsHidden.map(
|
||||
isHidden => {
|
||||
return { visible: !isHidden };
|
||||
}
|
||||
);
|
||||
|
||||
const vtkLabelmapID = `${firstImageId}_${activeLabelmapIndex}`;
|
||||
|
||||
@@ -349,7 +354,7 @@ class OHIFVTKViewport extends Component {
|
||||
|
||||
if (
|
||||
displaySet.displaySetInstanceUID !==
|
||||
prevDisplaySet.displaySetInstanceUID ||
|
||||
prevDisplaySet.displaySetInstanceUID ||
|
||||
displaySet.SOPInstanceUID !== prevDisplaySet.SOPInstanceUID ||
|
||||
displaySet.frameIndex !== prevDisplaySet.frameIndex
|
||||
) {
|
||||
@@ -360,34 +365,54 @@ class OHIFVTKViewport extends Component {
|
||||
loadProgressively(imageDataObject) {
|
||||
loadImageData(imageDataObject);
|
||||
|
||||
const { isLoading, insertPixelDataPromises } = imageDataObject;
|
||||
|
||||
const NumberOfFrames = insertPixelDataPromises.length;
|
||||
const { isLoading, imageIds } = imageDataObject;
|
||||
|
||||
if (!isLoading) {
|
||||
this.setState({ isLoaded: true });
|
||||
return;
|
||||
}
|
||||
|
||||
insertPixelDataPromises.forEach(promise => {
|
||||
promise.then(numberProcessed => {
|
||||
const percentComplete = Math.floor(
|
||||
(numberProcessed * 100) / NumberOfFrames
|
||||
);
|
||||
const NumberOfFrames = imageIds.length;
|
||||
|
||||
if (percentComplete !== this.state.percentComplete) {
|
||||
this.setState({
|
||||
percentComplete,
|
||||
const onPixelDataInsertedCallback = numberProcessed => {
|
||||
const percentComplete = Math.floor(
|
||||
(numberProcessed * 100) / NumberOfFrames
|
||||
);
|
||||
|
||||
if (percentComplete !== this.state.percentComplete) {
|
||||
this.setState({
|
||||
percentComplete,
|
||||
});
|
||||
}
|
||||
};
|
||||
|
||||
const onPixelDataInsertedErrorCallback = error => {
|
||||
const { UINotificationService } = this.props.servicesManager.services;
|
||||
|
||||
if (!this.hasError) {
|
||||
if (this.props.viewportIndex === 0) {
|
||||
// Only show the notification from one viewport 1 in MPR2D.
|
||||
UINotificationService.show({
|
||||
title: 'MPR Load Error',
|
||||
message: error.message,
|
||||
type: 'error',
|
||||
autoClose: false,
|
||||
});
|
||||
}
|
||||
});
|
||||
});
|
||||
|
||||
Promise.all(insertPixelDataPromises).then(() => {
|
||||
this.hasError = true;
|
||||
}
|
||||
};
|
||||
|
||||
const onAllPixelDataInsertedCallback = () => {
|
||||
this.setState({
|
||||
isLoaded: true,
|
||||
});
|
||||
});
|
||||
};
|
||||
|
||||
imageDataObject.onPixelDataInserted(onPixelDataInsertedCallback);
|
||||
imageDataObject.onAllPixelDataInserted(onAllPixelDataInsertedCallback);
|
||||
imageDataObject.onPixelDataInsertedError(onPixelDataInsertedErrorCallback);
|
||||
}
|
||||
|
||||
render() {
|
||||
@@ -435,7 +460,7 @@ class OHIFVTKViewport extends Component {
|
||||
segmentsDefaultProperties: this.segmentsDefaultProperties,
|
||||
onNewSegmentationRequested: () => {
|
||||
this.setStateFromProps();
|
||||
}
|
||||
},
|
||||
}}
|
||||
onScroll={this.props.onScroll}
|
||||
/>
|
||||
|
||||
@@ -3,6 +3,7 @@ import asyncComponent from './asyncComponent.js';
|
||||
import commandsModule from './commandsModule.js';
|
||||
import toolbarModule from './toolbarModule.js';
|
||||
import withCommandsManager from './withCommandsManager.js';
|
||||
import { version } from '../package.json';
|
||||
// This feels weird
|
||||
// import loadLocales from './loadLocales';
|
||||
|
||||
@@ -15,9 +16,12 @@ const vtkExtension = {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'vtk',
|
||||
version,
|
||||
|
||||
getViewportModule({ commandsManager }) {
|
||||
const ExtendedVTKViewport = props => <OHIFVTKViewport {...props} />;
|
||||
getViewportModule({ commandsManager, servicesManager }) {
|
||||
const ExtendedVTKViewport = props => (
|
||||
<OHIFVTKViewport {...props} servicesManager={servicesManager} />
|
||||
);
|
||||
return withCommandsManager(ExtendedVTKViewport, commandsManager);
|
||||
},
|
||||
getToolbarModule() {
|
||||
|
||||
Executable
+26
@@ -0,0 +1,26 @@
|
||||
#!/bin/sh
|
||||
NODE_MODULES_CACHE="./node_modules"
|
||||
LERNA_CACHE="$NODE_MODULES_CACHE/lerna-cache"
|
||||
|
||||
echo "Running netlify-lerna-cache.sh"
|
||||
mkdir -p "$NODE_MODULES_CACHE/lerna-cache"
|
||||
|
||||
cache_deps() {
|
||||
PACKAGES=$(ls -1 $1)
|
||||
|
||||
for PKG in $PACKAGES
|
||||
do
|
||||
PKG_NODE_MODULES="$1/$PKG/node_modules"
|
||||
if [ -d $PKG_NODE_MODULES ];
|
||||
then
|
||||
mv $PKG_NODE_MODULES $LERNA_CACHE/$PKG
|
||||
echo "Cached node modules for $PKG"
|
||||
else
|
||||
echo "Unable to cache node modules for $PKG"
|
||||
fi
|
||||
done
|
||||
}
|
||||
|
||||
cache_deps platform
|
||||
cache_deps extensions
|
||||
cache_deps modes
|
||||
Executable
+27
@@ -0,0 +1,27 @@
|
||||
#!/bin/sh
|
||||
NODE_MODULES_CACHE="./node_modules"
|
||||
LERNA_CACHE="$NODE_MODULES_CACHE/lerna-cache"
|
||||
|
||||
echo "Running netlify-lerna-restore.sh"
|
||||
mkdir -p "$NODE_MODULES_CACHE/lerna-cache"
|
||||
echo "$NODE_MODULES_CACHE/lerna-cache/*"
|
||||
|
||||
restore_deps() {
|
||||
PACKAGES=$(ls -1 $1)
|
||||
|
||||
for PKG in $PACKAGES
|
||||
do
|
||||
PKG_CACHE="$LERNA_CACHE/$PKG"
|
||||
if [ -d $PKG_CACHE ];
|
||||
then
|
||||
mv $PKG_CACHE $1/$PKG/node_modules
|
||||
echo "Restored node modules for $PKG"
|
||||
else
|
||||
echo "Unable to restore cache for $PKG"
|
||||
fi
|
||||
done
|
||||
}
|
||||
|
||||
restore_deps platform
|
||||
restore_deps extensions
|
||||
restore_deps modes
|
||||
+6
-7
@@ -8,6 +8,11 @@
|
||||
# managed by CircleCI and deployed to our Google Hosting
|
||||
#
|
||||
|
||||
[build]
|
||||
base = ""
|
||||
publish = ".netlify/www/"
|
||||
command = "chmod +x .netlify/build-deploy-preview.sh && .netlify/build-deploy-preview.sh"
|
||||
|
||||
# NODE_VERSION in root `.nvmrc` takes priority
|
||||
# YARN_FLAGS: https://www.netlify.com/docs/build-gotchas/#yarn
|
||||
[build.environment]
|
||||
@@ -16,19 +21,13 @@
|
||||
YARN_VERSION = "1.17.3"
|
||||
RUBY_VERSION = "2.6.2"
|
||||
YARN_FLAGS = "--no-ignore-optional --pure-lockfile"
|
||||
NETLIFY_RESTORE = "1"
|
||||
|
||||
# Production context: all deploys from the Production branch set in your site's
|
||||
# deploy contexts will inherit these settings.
|
||||
[context.production]
|
||||
ignore = "exit 0" # Never build production; We'll let our CI do that
|
||||
|
||||
# Deploy Preview context: all deploys generated from a pull/merge request will
|
||||
# inherit these settings.
|
||||
[context.deploy-preview]
|
||||
base = ""
|
||||
publish = ".netlify/www/"
|
||||
command = "chmod +x .netlify/build-deploy-preview.sh && .netlify/build-deploy-preview.sh"
|
||||
|
||||
[[headers]]
|
||||
# Define which paths this specific [[headers]] block will cover.
|
||||
for = "/*"
|
||||
|
||||
@@ -34,6 +34,8 @@
|
||||
"see-changed": "lerna changed",
|
||||
"docs:publish": "chmod +x ./build-and-publish-docs.sh && ./build-and-publish-docs.sh",
|
||||
"release": "yarn run lerna:version && yarn run lerna:publish",
|
||||
"lerna:cache": "./netlify-lerna-cache.sh",
|
||||
"lerna:restore": "./netlify-lerna-restore.sh",
|
||||
"lerna:version": "npx lerna version prerelease --force-publish",
|
||||
"lerna:publish": "lerna publish from-package --canary --dist-tag canary",
|
||||
"link-list": "npm ls --depth=0 --link=true"
|
||||
|
||||
@@ -3,6 +3,49 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [2.10.3](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.2...@ohif/core@2.10.3) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.10.2](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.1...@ohif/core@2.10.2) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.10.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.0...@ohif/core@2.10.1) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [2.10.0](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.14...@ohif/core@2.10.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.9.14](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.13...@ohif/core@2.9.14) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [2.9.13](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.12...@ohif/core@2.9.13) (2020-07-22)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/core",
|
||||
"version": "2.9.13",
|
||||
"version": "2.10.3",
|
||||
"description": "Generic business logic for web-based medical imaging applications",
|
||||
"author": "OHIF Core Team",
|
||||
"license": "MIT",
|
||||
@@ -32,14 +32,14 @@
|
||||
},
|
||||
"peerDependencies": {
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dicom-parser": "^1.8.3"
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"ajv": "^6.10.0",
|
||||
"dcmjs": "0.16.0",
|
||||
"dcmjs": "0.16.3",
|
||||
"dicomweb-client": "^0.6.0",
|
||||
"immer": "6.0.2",
|
||||
"isomorphic-base64": "^1.0.2",
|
||||
|
||||
@@ -54,9 +54,6 @@ export class OHIFStudyMetadataSource extends StudyMetadataSource {
|
||||
// Get Study display sets
|
||||
const displaySets = studyMetadata.createDisplaySets();
|
||||
|
||||
// Set studyMetadata display sets
|
||||
studyMetadata.setDisplaySets(displaySets);
|
||||
|
||||
OHIFStudyMetadataSource._updateStudyCollections(studyMetadata);
|
||||
resolve(studyMetadata);
|
||||
})
|
||||
|
||||
@@ -10,8 +10,8 @@ import { api } from 'dicomweb-client';
|
||||
// - createStacks
|
||||
import { isImage } from '../../utils/isImage';
|
||||
import isDisplaySetReconstructable from '../../utils/isDisplaySetReconstructable';
|
||||
import isLowPriorityModality from '../../utils/isLowPriorityModality';
|
||||
import errorHandler from '../../errorHandler';
|
||||
import isLowPriorityModality from '../../utils/isLowPriorityModality';
|
||||
|
||||
export class StudyMetadata extends Metadata {
|
||||
constructor(data, uid) {
|
||||
@@ -139,9 +139,11 @@ export class StudyMetadata extends Metadata {
|
||||
if (displaySet) {
|
||||
displaySet.sopClassModule = true;
|
||||
|
||||
displaySet.isDerived
|
||||
? this._addDerivedDisplaySet(displaySet)
|
||||
: displaySets.push(displaySet);
|
||||
if (displaySet.isDerived) {
|
||||
this._addDerivedDisplaySet(displaySet);
|
||||
}
|
||||
|
||||
displaySets.push(displaySet);
|
||||
|
||||
return displaySets;
|
||||
}
|
||||
@@ -306,14 +308,10 @@ export class StudyMetadata extends Metadata {
|
||||
series
|
||||
);
|
||||
|
||||
displaySets.push(...displaySetsForSeries);
|
||||
displaySetsForSeries.forEach(ds => this._insertDisplaySet(ds));
|
||||
});
|
||||
|
||||
return sortDisplaySetList(displaySets);
|
||||
}
|
||||
|
||||
sortDisplaySets() {
|
||||
sortDisplaySetList(this._displaySets);
|
||||
return this._displaySets;
|
||||
}
|
||||
|
||||
/**
|
||||
@@ -344,25 +342,9 @@ export class StudyMetadata extends Metadata {
|
||||
this.addDisplaySet(displaySet);
|
||||
});
|
||||
|
||||
this.sortDisplaySets();
|
||||
|
||||
return true;
|
||||
}
|
||||
|
||||
/**
|
||||
* Set display sets
|
||||
* @param {Array} displaySets Array of display sets (ImageSet[])
|
||||
*/
|
||||
setDisplaySets(displaySets) {
|
||||
if (Array.isArray(displaySets) && displaySets.length > 0) {
|
||||
// TODO: This is weird, can we just switch it to writable: true?
|
||||
this._displaySets.splice(0);
|
||||
|
||||
displaySets.forEach(displaySet => this.addDisplaySet(displaySet));
|
||||
this.sortDisplaySets();
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Add a single display set to the list
|
||||
* @param {Object} displaySet Display set object
|
||||
@@ -370,7 +352,7 @@ export class StudyMetadata extends Metadata {
|
||||
*/
|
||||
addDisplaySet(displaySet) {
|
||||
if (displaySet instanceof ImageSet || displaySet.sopClassModule) {
|
||||
this._displaySets.push(displaySet);
|
||||
this._insertDisplaySet(displaySet);
|
||||
return true;
|
||||
}
|
||||
return false;
|
||||
@@ -391,6 +373,96 @@ export class StudyMetadata extends Metadata {
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Insert the displaySet so that the list has an increasing SeriesNumber,
|
||||
* with the most recent series first for displaySets with the same SeriesNumber.
|
||||
*
|
||||
* If the displaySet is low priority, the same logic is applied, but is sorted within a sub list
|
||||
* At the end of the list, where all low priority data is found.
|
||||
*/
|
||||
_insertDisplaySet(displaySet) {
|
||||
const { SeriesNumber } = displaySet;
|
||||
const displaySets = this._displaySets;
|
||||
let insertIndex = displaySets.length;
|
||||
let firstIndexWithSameSeriesNumber;
|
||||
|
||||
// If low priority, start search from next low priority.
|
||||
if (isLowPriorityModality(displaySet.Modality)) {
|
||||
let startingIndex;
|
||||
|
||||
// Find where the first low priority displaySet is.
|
||||
for (let i = 0; i < displaySets.length; i++) {
|
||||
if (isLowPriorityModality(displaySets[i].Modality)) {
|
||||
startingIndex = i;
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
if (!startingIndex) {
|
||||
startingIndex = displaySets.length;
|
||||
}
|
||||
|
||||
// Find the correct SeriesNumber location to insert within the low priority
|
||||
// Modality displaySets
|
||||
for (let i = startingIndex; i < displaySets.length; i++) {
|
||||
if (
|
||||
displaySets[i].SeriesNumber === SeriesNumber &&
|
||||
!firstIndexWithSameSeriesNumber
|
||||
) {
|
||||
firstIndexWithSameSeriesNumber = i;
|
||||
}
|
||||
|
||||
if (displaySets[i].SeriesNumber > SeriesNumber) {
|
||||
insertIndex = i;
|
||||
break;
|
||||
}
|
||||
}
|
||||
} else {
|
||||
// Find correct SeriesNumber to insert or where the low priority modalities start.
|
||||
for (let i = 0; i < displaySets.length; i++) {
|
||||
if (
|
||||
displaySets[i].SeriesNumber === SeriesNumber &&
|
||||
!firstIndexWithSameSeriesNumber
|
||||
) {
|
||||
firstIndexWithSameSeriesNumber = i;
|
||||
}
|
||||
|
||||
if (
|
||||
displaySets[i].SeriesNumber > SeriesNumber ||
|
||||
isLowPriorityModality(displaySets[i].Modality)
|
||||
) {
|
||||
insertIndex = i;
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// If we have multiple displaySets with the same series number, find the insert position based on
|
||||
// SeriesDate and SeriesTime.
|
||||
if (firstIndexWithSameSeriesNumber !== undefined) {
|
||||
// If no SeriesDate, is just a placeholder displaySet, just insert anywhere, it will be re-added later.
|
||||
if (displaySet.SeriesDate) {
|
||||
const seriesDateTime = `${displaySet.SeriesDate}${displaySet.SeriesTime}`;
|
||||
|
||||
for (let i = firstIndexWithSameSeriesNumber; i < insertIndex; i++) {
|
||||
const displaySetI = displaySets[i];
|
||||
|
||||
if (
|
||||
displaySetI.SeriesDate &&
|
||||
`${displaySetI.SeriesDate}${displaySetI.SeriesTime}` <
|
||||
seriesDateTime
|
||||
) {
|
||||
insertIndex = i;
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
this._displaySets.splice(insertIndex, 0, displaySet);
|
||||
this.displaySets = this._displaySets;
|
||||
}
|
||||
|
||||
/**
|
||||
* Search the associated display sets using the supplied callback as criteria. The callback is passed
|
||||
* two arguments: display set (an ImageSet instance) and index (the integer
|
||||
@@ -546,49 +618,6 @@ export class StudyMetadata extends Metadata {
|
||||
return this._series.indexOf(series);
|
||||
}
|
||||
|
||||
/**
|
||||
* It sorts the series based on display sets order. Each series must be an instance
|
||||
* of SeriesMetadata and each display sets must be an instance of ImageSet.
|
||||
* Useful example of usage:
|
||||
* Study data provided by backend does not sort series at all and client-side
|
||||
* needs series sorted by the same criteria used for sorting display sets.
|
||||
*/
|
||||
sortSeriesByDisplaySets() {
|
||||
// Object for mapping display sets' index by SeriesInstanceUID
|
||||
const displaySetsMapping = {};
|
||||
|
||||
// Loop through each display set to create the mapping
|
||||
this.forEachDisplaySet((displaySet, index) => {
|
||||
if (!(displaySet instanceof ImageSet)) {
|
||||
throw new OHIFError(
|
||||
`StudyMetadata::sortSeriesByDisplaySets display set at index ${index} is not an instance of ImageSet`
|
||||
);
|
||||
}
|
||||
|
||||
// In case of multiframe studies, just get the first index occurence
|
||||
if (displaySetsMapping[displaySet.SeriesInstanceUID] === void 0) {
|
||||
displaySetsMapping[displaySet.SeriesInstanceUID] = index;
|
||||
}
|
||||
});
|
||||
|
||||
// Clone of actual series
|
||||
const actualSeries = this.getSeries();
|
||||
|
||||
actualSeries.forEach((series, index) => {
|
||||
if (!(series instanceof SeriesMetadata)) {
|
||||
throw new OHIFError(
|
||||
`StudyMetadata::sortSeriesByDisplaySets series at index ${index} is not an instance of SeriesMetadata`
|
||||
);
|
||||
}
|
||||
|
||||
// Get the new series index
|
||||
const seriesIndex = displaySetsMapping[series.getSeriesInstanceUID()];
|
||||
|
||||
// Update the series object with the new series position
|
||||
this._series[seriesIndex] = series;
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Compares the current study instance with another one.
|
||||
* @param {StudyMetadata} study An instance of the StudyMetadata class.
|
||||
@@ -863,53 +892,3 @@ function _getDisplaySetFromSopClassModule(
|
||||
}
|
||||
return displaySet;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sort series primarily by Modality (i.e., series with references to other
|
||||
* series like SEG, KO or PR are grouped in the end of the list) and then by
|
||||
* series number:
|
||||
*
|
||||
* --------
|
||||
* | CT #3 |
|
||||
* | CT #4 |
|
||||
* | CT #5 |
|
||||
* --------
|
||||
* | SEG #1 |
|
||||
* | SEG #2 |
|
||||
* --------
|
||||
*
|
||||
* @param {*} a - DisplaySet
|
||||
* @param {*} b - DisplaySet
|
||||
*/
|
||||
|
||||
function seriesSortingCriteria(a, b) {
|
||||
const isLowPriorityA = isLowPriorityModality(a.Modality);
|
||||
const isLowPriorityB = isLowPriorityModality(b.Modality);
|
||||
if (!isLowPriorityA && isLowPriorityB) {
|
||||
return -1;
|
||||
}
|
||||
if (isLowPriorityA && !isLowPriorityB) {
|
||||
return 1;
|
||||
}
|
||||
return sortBySeriesNumber(a, b);
|
||||
}
|
||||
|
||||
/**
|
||||
* Sort series by series number. Series with low
|
||||
* @param {*} a - DisplaySet
|
||||
* @param {*} b - DisplaySet
|
||||
*/
|
||||
function sortBySeriesNumber(a, b) {
|
||||
const seriesNumberAIsGreaterOrUndefined =
|
||||
a.SeriesNumber > b.SeriesNumber || (!a.SeriesNumber && b.SeriesNumber);
|
||||
|
||||
return seriesNumberAIsGreaterOrUndefined ? 1 : -1;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sorts a list of display set objects
|
||||
* @param {Array} list A list of display sets to be sorted
|
||||
*/
|
||||
function sortDisplaySetList(list) {
|
||||
return list.sort(seriesSortingCriteria);
|
||||
}
|
||||
@@ -5,6 +5,7 @@ export default class ExtensionManager {
|
||||
constructor({ commandsManager, servicesManager, api, appConfig = {} }) {
|
||||
this.modules = {};
|
||||
this.registeredExtensionIds = [];
|
||||
this.registeredExtensionVesions = {};
|
||||
this.moduleTypeNames = Object.values(MODULE_TYPES);
|
||||
//
|
||||
this._commandsManager = commandsManager;
|
||||
@@ -51,6 +52,7 @@ export default class ExtensionManager {
|
||||
}
|
||||
|
||||
let extensionId = extension.id;
|
||||
const version = extension.version;
|
||||
|
||||
if (!extensionId) {
|
||||
extensionId = Math.random()
|
||||
@@ -98,6 +100,8 @@ export default class ExtensionManager {
|
||||
|
||||
// Track extension registration
|
||||
this.registeredExtensionIds.push(extensionId);
|
||||
|
||||
this.registeredExtensionVesions[extensionId] = version;
|
||||
}
|
||||
|
||||
/**
|
||||
@@ -120,7 +124,8 @@ export default class ExtensionManager {
|
||||
commandsManager: this._commandsManager,
|
||||
appConfig: this._appConfig,
|
||||
configuration,
|
||||
api: this._api
|
||||
api: this._api,
|
||||
extensionManager: this,
|
||||
});
|
||||
|
||||
if (!extensionModule) {
|
||||
|
||||
@@ -184,6 +184,8 @@ describe('ExtensionManager.js', () => {
|
||||
commandsManager,
|
||||
appConfig,
|
||||
configuration: extensionConfiguration,
|
||||
api: undefined,
|
||||
extensionManager,
|
||||
});
|
||||
}
|
||||
});
|
||||
@@ -226,7 +228,7 @@ describe('ExtensionManager.js', () => {
|
||||
return {
|
||||
definitions: {
|
||||
exampleDefinition: {
|
||||
commandFn: () => { },
|
||||
commandFn: () => {},
|
||||
storeContexts: [],
|
||||
options: {},
|
||||
},
|
||||
|
||||
@@ -1,4 +1,11 @@
|
||||
const LOW_PRIORITY_MODALITIES = Object.freeze(['SEG', 'KO', 'PR']);
|
||||
const LOW_PRIORITY_MODALITIES = Object.freeze([
|
||||
'SEG',
|
||||
'DOC',
|
||||
'RTSTRUCT',
|
||||
'SR',
|
||||
'KO',
|
||||
'PR',
|
||||
]);
|
||||
|
||||
export default function isLowPriorityModality(Modality) {
|
||||
return LOW_PRIORITY_MODALITIES.includes(Modality);
|
||||
|
||||
@@ -3,6 +3,14 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.5.3](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.5.2...@ohif/ui@1.5.3) (2020-07-23)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.5.2](https://github.com/OHIF/Viewers/compare/@ohif/ui@1.5.1...@ohif/ui@1.5.2) (2020-07-22)
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,25 @@
|
||||
const path = require('path');
|
||||
// ~~ Plugins
|
||||
const PnpWebpackPlugin = require(`pnp-webpack-plugin`); // Required until Webpack@5
|
||||
|
||||
exports.onCreateWebpackConfig = args => {
|
||||
args.actions.setWebpackConfig({
|
||||
node: { fs: 'empty' },
|
||||
resolve: {
|
||||
plugins: [PnpWebpackPlugin],
|
||||
// Note the '..' in the path because docz gatsby project lives in the '.docz' directory
|
||||
modules: [
|
||||
// platform/ui
|
||||
path.resolve(__dirname, '../node_modules'),
|
||||
// .docz
|
||||
'node_modules',
|
||||
],
|
||||
// resolve: {
|
||||
// symlinks: true,
|
||||
// },
|
||||
},
|
||||
resolveLoader: {
|
||||
plugins: [PnpWebpackPlugin.moduleLoader(module)],
|
||||
},
|
||||
});
|
||||
};
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/ui",
|
||||
"version": "1.5.2",
|
||||
"version": "1.5.3",
|
||||
"description": "A set of React components for Medical Imaging Viewers",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -9,7 +9,7 @@ services:
|
||||
max-size: '10m'
|
||||
ports:
|
||||
- '389:389'
|
||||
env_file: ./dcm4che/docker-compose-dcm4che.env
|
||||
env_file: ./docker-compose-dcm4che.env
|
||||
volumes:
|
||||
- ./dcm4che/etc/localtime:/etc/localtime:ro
|
||||
- ./dcm4che/etc/timezone:/etc/timezone:ro
|
||||
@@ -25,7 +25,7 @@ services:
|
||||
max-size: '10m'
|
||||
ports:
|
||||
- '5432:5432'
|
||||
env_file: ./dcm4che/docker-compose-dcm4che.env
|
||||
env_file: ./docker-compose-dcm4che.env
|
||||
volumes:
|
||||
- ./dcm4che/etc/localtime:/etc/localtime:ro
|
||||
- ./dcm4che/etc/timezone:/etc/timezone:ro
|
||||
@@ -44,7 +44,7 @@ services:
|
||||
- '9990:9990'
|
||||
- '11112:11112'
|
||||
- '2575:2575'
|
||||
env_file: ./dcm4che/docker-compose-dcm4che.env
|
||||
env_file: ./docker-compose-dcm4che.env
|
||||
environment:
|
||||
WILDFLY_CHOWN: /opt/wildfly/standalone /storage
|
||||
WILDFLY_WAIT_FOR: ldap:389 db:5432
|
||||
@@ -73,5 +73,4 @@ services:
|
||||
restart: always
|
||||
networks:
|
||||
- dcm4che_default
|
||||
|
||||
networks: dcm4che_default:
|
||||
networks: dcm4che_default:
|
||||
@@ -3,6 +3,130 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [4.5.5](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.4...@ohif/viewer@4.5.5) (2020-09-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.5.4](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.3...@ohif/viewer@4.5.4) (2020-09-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.5.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.2...@ohif/viewer@4.5.3) (2020-08-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.5.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.1...@ohif/viewer@4.5.2) (2020-08-24)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.5.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.0...@ohif/viewer@4.5.1) (2020-08-20)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [4.5.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.4.1...@ohif/viewer@4.5.0) (2020-08-20)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Filter/promote multiple series instances ([#1533](https://github.com/OHIF/Viewers/issues/1533)) ([5fdace1](https://github.com/OHIF/Viewers/commit/5fdace1432b4b1bd31a60c5db6bd681610ec2b8e))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.4.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.4.0...@ohif/viewer@4.4.1) (2020-08-20)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Fix incorrect command name in Percy test ([#1999](https://github.com/OHIF/Viewers/issues/1999)) ([ebdcde1](https://github.com/OHIF/Viewers/commit/ebdcde1c4d9c95393cf79cc9994f5d60f6d66fdd))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [4.4.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.3.1...@ohif/viewer@4.4.0) (2020-08-18)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.3.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.3.0...@ohif/viewer@4.3.1) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [4.3.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.16...@ohif/viewer@4.3.0) (2020-08-10)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Optional disable measurements panel in app config ([#1912](https://github.com/OHIF/Viewers/issues/1912)) ([3d86b5f](https://github.com/OHIF/Viewers/commit/3d86b5f876d6481bcc57de88a0ba1f974f4ee263)), closes [#1864](https://github.com/OHIF/Viewers/issues/1864)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.2.16](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.15...@ohif/viewer@4.2.16) (2020-08-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.2.15](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.14...@ohif/viewer@4.2.15) (2020-08-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.2.14](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.13...@ohif/viewer@4.2.14) (2020-08-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.2.13](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.12...@ohif/viewer@4.2.13) (2020-07-23)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [4.2.12](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.11...@ohif/viewer@4.2.12) (2020-07-22)
|
||||
|
||||
|
||||
|
||||
@@ -115,13 +115,13 @@ Commands to run the tests:
|
||||
|
||||
```js
|
||||
// Open Cypress Dashboard that provides insight into what happened when your tests ran
|
||||
yarn run cy
|
||||
yarn test:e2e
|
||||
|
||||
// Run all tests using Electron browser headless
|
||||
yarn run cy:run
|
||||
yarn test:e2e:local
|
||||
|
||||
// Run all tests in CI mode
|
||||
yarn run cy:run:ci
|
||||
yarn run test:e2e:ci
|
||||
```
|
||||
|
||||
### Contributing
|
||||
|
||||
@@ -12,6 +12,8 @@ describe('OHIF Microscopy Extension', () => {
|
||||
});
|
||||
|
||||
it('drags and drop a SM thumbnail into viewport', () => {
|
||||
// Waiting for series list to load all displaySets (lots of SRs, before defining which dom element to grab.)
|
||||
cy.wait(3000);
|
||||
cy.get('[data-cy="thumbnail-list"]')
|
||||
.contains('SM')
|
||||
.drag('.viewport-drop-target');
|
||||
|
||||
+1
-1
@@ -19,7 +19,7 @@ describe('Visual Regression - OHIF VTK Extension', () => {
|
||||
cy.get('[data-cy="2d mpr"]').click();
|
||||
|
||||
//Wait waitVTKLoading Images
|
||||
cy.waitVTKwaitVTKLoading();
|
||||
cy.waitVTKLoading();
|
||||
});
|
||||
|
||||
beforeEach(() => {
|
||||
|
||||
@@ -114,7 +114,7 @@ Cypress.Commands.add('waitVTKLoading', () => {
|
||||
});
|
||||
|
||||
// Wait for finish loading
|
||||
cy.get('[data-cy="viewprt-grid"]', { timeout: 30000 }).should($grid => {
|
||||
cy.get('[data-cy="viewprt-grid"]', { timeout: 90000 }).should($grid => {
|
||||
expect($grid).not.to.contain.text('Loading');
|
||||
});
|
||||
});
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/viewer",
|
||||
"version": "4.2.12",
|
||||
"version": "4.5.5",
|
||||
"description": "OHIF Viewer",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
@@ -48,26 +48,26 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"@ohif/core": "^2.9.13",
|
||||
"@ohif/extension-cornerstone": "^2.8.4",
|
||||
"@ohif/extension-dicom-html": "^1.2.4",
|
||||
"@ohif/extension-dicom-microscopy": "^0.51.0",
|
||||
"@ohif/extension-dicom-p10-downloader": "^0.1.2",
|
||||
"@ohif/extension-dicom-pdf": "^1.0.3",
|
||||
"@ohif/extension-dicom-rt": "^0.2.5",
|
||||
"@ohif/extension-dicom-segmentation": "^0.3.3",
|
||||
"@ohif/extension-lesion-tracker": "^0.2.0",
|
||||
"@ohif/extension-vtk": "^1.6.8",
|
||||
"@ohif/core": "^2.10.3",
|
||||
"@ohif/extension-cornerstone": "^2.9.4",
|
||||
"@ohif/extension-debugging": "^0.1.3",
|
||||
"@ohif/extension-dicom-html": "^1.2.7",
|
||||
"@ohif/extension-dicom-microscopy": "^0.51.2",
|
||||
"@ohif/extension-dicom-pdf": "^1.0.5",
|
||||
"@ohif/extension-dicom-rt": "^0.4.3",
|
||||
"@ohif/extension-dicom-segmentation": "^0.4.3",
|
||||
"@ohif/extension-lesion-tracker": "^0.2.1",
|
||||
"@ohif/extension-vtk": "^1.7.4",
|
||||
"@ohif/i18n": "^0.52.8",
|
||||
"@ohif/ui": "^1.5.2",
|
||||
"@ohif/ui": "^1.5.3",
|
||||
"@tanem/react-nprogress": "^1.1.25",
|
||||
"classnames": "^2.2.6",
|
||||
"core-js": "^3.2.1",
|
||||
"cornerstone-core": "^2.2.8",
|
||||
"cornerstone-math": "^0.1.8",
|
||||
"cornerstone-tools": "4.15.1",
|
||||
"cornerstone-tools": "^4.20.1",
|
||||
"cornerstone-wado-image-loader": "^3.1.0",
|
||||
"dcmjs": "0.16.0",
|
||||
"dcmjs": "0.16.3",
|
||||
"dicom-parser": "^1.8.3",
|
||||
"dicomweb-client": "^0.4.4",
|
||||
"hammerjs": "^2.0.8",
|
||||
|
||||
@@ -2,6 +2,7 @@ window.config = function(props) {
|
||||
var servicesManager = props.servicesManager;
|
||||
|
||||
return {
|
||||
disableMeasurementPanel: true,
|
||||
routerBasename: '/',
|
||||
enableGoogleCloudAdapter: true,
|
||||
enableGoogleCloudAdapterUI: false,
|
||||
|
||||
@@ -13,7 +13,7 @@ import {
|
||||
ModalProvider,
|
||||
DialogProvider,
|
||||
OHIFModal,
|
||||
ErrorBoundary
|
||||
ErrorBoundary,
|
||||
} from '@ohif/ui';
|
||||
|
||||
import {
|
||||
@@ -168,7 +168,7 @@ class App extends Component {
|
||||
|
||||
if (this._userManager) {
|
||||
return (
|
||||
<ErrorBoundary context='App'>
|
||||
<ErrorBoundary context="App">
|
||||
<Provider store={store}>
|
||||
<AppProvider config={this._appConfig}>
|
||||
<I18nextProvider i18n={i18n}>
|
||||
@@ -200,7 +200,7 @@ class App extends Component {
|
||||
}
|
||||
|
||||
return (
|
||||
<ErrorBoundary context='App'>
|
||||
<ErrorBoundary context="App">
|
||||
<Provider store={store}>
|
||||
<AppProvider config={this._appConfig}>
|
||||
<I18nextProvider i18n={i18n}>
|
||||
@@ -271,17 +271,21 @@ function _initExtensions(extensions, cornerstoneExtensionConfig, appConfig) {
|
||||
api: {
|
||||
contexts: CONTEXTS,
|
||||
hooks: {
|
||||
useAppContext
|
||||
}
|
||||
}
|
||||
useAppContext,
|
||||
},
|
||||
},
|
||||
});
|
||||
|
||||
const requiredExtensions = [
|
||||
GenericViewerCommands,
|
||||
[OHIFCornerstoneExtension, cornerstoneExtensionConfig],
|
||||
/* WARNING: MUST BE REGISTERED _AFTER_ OHIFCornerstoneExtension */
|
||||
MeasurementsPanel,
|
||||
];
|
||||
|
||||
if (appConfig.disableMeasurementPanel !== true) {
|
||||
/* WARNING: MUST BE REGISTERED _AFTER_ OHIFCornerstoneExtension */
|
||||
requiredExtensions.push(MeasurementsPanel);
|
||||
}
|
||||
|
||||
const mergedExtensions = requiredExtensions.concat(extensions);
|
||||
extensionManager.registerExtensions(mergedExtensions);
|
||||
}
|
||||
|
||||
@@ -2,6 +2,9 @@ import commandsModule from './commandsModule.js';
|
||||
|
||||
export default {
|
||||
id: 'generic-viewer-commands',
|
||||
get version() {
|
||||
return window.version;
|
||||
},
|
||||
getCommandsModule({ commandsManager }) {
|
||||
return commandsModule({ commandsManager });
|
||||
},
|
||||
|
||||
@@ -9,6 +9,9 @@ export default {
|
||||
* Only required property. Should be a unique value across all extensions.
|
||||
*/
|
||||
id: 'measurements-table',
|
||||
get version() {
|
||||
return window.version;
|
||||
},
|
||||
|
||||
preRegistration({ servicesManager, commandsManager, configuration = {} }) {
|
||||
init({ servicesManager, commandsManager, configuration });
|
||||
|
||||
@@ -80,6 +80,7 @@ const ViewportGrid = function(props) {
|
||||
// - When updating a panel, ensure that the currently enabled plugin
|
||||
// in the viewport is capable of rendering this display set. If not
|
||||
// then use the most capable available plugin
|
||||
|
||||
const pluginName =
|
||||
!layout.plugin && displaySet && displaySet.plugin
|
||||
? displaySet.plugin
|
||||
|
||||
@@ -4,6 +4,8 @@ import { StudyBrowser } from '@ohif/ui';
|
||||
import cloneDeep from 'lodash.clonedeep';
|
||||
import findDisplaySetByUID from './findDisplaySetByUID';
|
||||
|
||||
const { studyMetadataManager } = OHIF.utils;
|
||||
|
||||
const { setActiveViewportSpecificData } = OHIF.redux.actions;
|
||||
|
||||
// TODO
|
||||
@@ -39,11 +41,27 @@ const mapStateToProps = (state, ownProps) => {
|
||||
const mapDispatchToProps = (dispatch, ownProps) => {
|
||||
return {
|
||||
onThumbnailClick: displaySetInstanceUID => {
|
||||
const displaySet = findDisplaySetByUID(
|
||||
let displaySet = findDisplaySetByUID(
|
||||
ownProps.studyMetadata,
|
||||
displaySetInstanceUID
|
||||
);
|
||||
|
||||
if (displaySet.isDerived) {
|
||||
const { Modality } = displaySet;
|
||||
|
||||
displaySet = displaySet.getSourceDisplaySet(ownProps.studyMetadata);
|
||||
|
||||
if (!displaySet) {
|
||||
throw new Error(
|
||||
`Referenced series for ${Modality} dataset not present.`
|
||||
);
|
||||
}
|
||||
|
||||
if (!displaySet) {
|
||||
throw new Error('Source data not present');
|
||||
}
|
||||
}
|
||||
|
||||
dispatch(setActiveViewportSpecificData(displaySet));
|
||||
},
|
||||
};
|
||||
|
||||
@@ -19,6 +19,7 @@ import UserManagerContext from '../context/UserManagerContext';
|
||||
import AppContext from '../context/AppContext';
|
||||
|
||||
import './Viewer.css';
|
||||
import { finished } from 'stream';
|
||||
|
||||
class Viewer extends Component {
|
||||
static propTypes = {
|
||||
@@ -189,6 +190,7 @@ class Viewer extends Component {
|
||||
currentTimepointId,
|
||||
]);
|
||||
}
|
||||
|
||||
this.setState({
|
||||
thumbnails: _mapStudiesToThumbnails(studies),
|
||||
});
|
||||
@@ -197,6 +199,7 @@ class Viewer extends Component {
|
||||
|
||||
componentDidUpdate(prevProps) {
|
||||
const { studies, isStudyLoaded } = this.props;
|
||||
|
||||
if (studies !== prevProps.studies) {
|
||||
this.setState({
|
||||
thumbnails: _mapStudiesToThumbnails(studies),
|
||||
@@ -355,7 +358,6 @@ export default withDialog(Viewer);
|
||||
* a mapping layer?
|
||||
*
|
||||
* TODO[react]:
|
||||
* - Add sorting of display sets
|
||||
* - Add showStackLoadingProgressBar option
|
||||
*
|
||||
* @param {Study[]} studies
|
||||
@@ -369,9 +371,9 @@ const _mapStudiesToThumbnails = function(studies) {
|
||||
const {
|
||||
displaySetInstanceUID,
|
||||
SeriesDescription,
|
||||
SeriesNumber,
|
||||
InstanceNumber,
|
||||
numImageFrames,
|
||||
SeriesNumber,
|
||||
} = displaySet;
|
||||
|
||||
let imageId;
|
||||
@@ -395,9 +397,9 @@ const _mapStudiesToThumbnails = function(studies) {
|
||||
altImageText,
|
||||
displaySetInstanceUID,
|
||||
SeriesDescription,
|
||||
SeriesNumber,
|
||||
InstanceNumber,
|
||||
numImageFrames,
|
||||
SeriesNumber,
|
||||
};
|
||||
});
|
||||
|
||||
|
||||
@@ -77,7 +77,6 @@ class ViewerLocalFileData extends Component {
|
||||
study.displaySets =
|
||||
study.displaySets ||
|
||||
studyMetadata.createDisplaySets(sopClassHandlerModules);
|
||||
studyMetadata.setDisplaySets(study.displaySets);
|
||||
|
||||
studyMetadata.forEachDisplaySet(displayset => {
|
||||
displayset.localFile = true;
|
||||
|
||||
@@ -133,12 +133,23 @@ class ViewerMain extends Component {
|
||||
StudyInstanceUID,
|
||||
displaySetInstanceUID,
|
||||
}) => {
|
||||
const displaySet = this.findDisplaySet(
|
||||
let displaySet = this.findDisplaySet(
|
||||
this.props.studies,
|
||||
StudyInstanceUID,
|
||||
displaySetInstanceUID
|
||||
);
|
||||
|
||||
if (displaySet.isDerived) {
|
||||
const { Modality } = displaySet;
|
||||
displaySet = displaySet.getSourceDisplaySet(this.props.studies);
|
||||
|
||||
if (!displaySet) {
|
||||
throw new Error(
|
||||
`Referenced series for ${Modality} dataset not present.`
|
||||
);
|
||||
}
|
||||
}
|
||||
|
||||
this.props.setViewportSpecificData(viewportIndex, displaySet);
|
||||
};
|
||||
|
||||
|
||||
@@ -14,23 +14,25 @@ const { OHIFStudyMetadata, OHIFSeriesMetadata } = metadata;
|
||||
const { retrieveStudiesMetadata, deleteStudyMetadataPromise } = studies;
|
||||
const { studyMetadataManager, makeCancelable } = utils;
|
||||
|
||||
const _promoteToFront = (list, value, searchMethod) => {
|
||||
let response = [...list];
|
||||
let promoted = false;
|
||||
const index = response.findIndex(searchMethod.bind(undefined, value));
|
||||
const _promoteToFront = (list, values, searchMethod) => {
|
||||
let listCopy = [...list];
|
||||
let response = [];
|
||||
let promotedCount = 0;
|
||||
|
||||
if (index > 0) {
|
||||
const first = response.splice(index, 1);
|
||||
response = [...first, ...response];
|
||||
}
|
||||
const arrayValues = values.split(',');
|
||||
arrayValues.forEach(value => {
|
||||
const index = listCopy.findIndex(searchMethod.bind(undefined, value));
|
||||
|
||||
if (index >= 0) {
|
||||
promoted = true;
|
||||
}
|
||||
if (index >= 0) {
|
||||
const [itemToPromote] = listCopy.splice(index, 1);
|
||||
response[promotedCount] = itemToPromote;
|
||||
promotedCount++;
|
||||
}
|
||||
});
|
||||
|
||||
return {
|
||||
promoted,
|
||||
data: response,
|
||||
promoted: promotedCount === arrayValues.length,
|
||||
data: [...response, ...listCopy],
|
||||
};
|
||||
};
|
||||
|
||||
@@ -45,7 +47,6 @@ const _promoteList = (study, studyMetadata, filters, isFilterStrategy) => {
|
||||
let promoted = false;
|
||||
// Promote only if no filter should be applied
|
||||
if (!isFilterStrategy) {
|
||||
_sortStudyDisplaySet(study, studyMetadata);
|
||||
promoted = _promoteStudyDisplaySet(study, studyMetadata, filters);
|
||||
}
|
||||
|
||||
@@ -90,12 +91,48 @@ const _isQueryParamApplied = (study, filters = {}, isFilterStrategy) => {
|
||||
if (!seriesInstanceUID) {
|
||||
return applied;
|
||||
}
|
||||
const seriesInstanceUIDs = seriesInstanceUID.split(',');
|
||||
|
||||
let validateFilterApplied = () => {
|
||||
const sameSize = arrayToInspect.length === seriesInstanceUIDs.length;
|
||||
if (!sameSize) {
|
||||
return;
|
||||
}
|
||||
|
||||
return arrayToInspect.every(item =>
|
||||
seriesInstanceUIDs.some(
|
||||
seriesInstanceUIDStr => seriesInstanceUIDStr === item.SeriesInstanceUID
|
||||
)
|
||||
);
|
||||
};
|
||||
|
||||
let validatePromoteApplied = () => {
|
||||
let isValid = true;
|
||||
for (let index = 0; index < seriesInstanceUIDs.length; index++) {
|
||||
const seriesInstanceUIDStr = seriesInstanceUIDs[index];
|
||||
const resultSeries = arrayToInspect[index];
|
||||
|
||||
if (
|
||||
!resultSeries ||
|
||||
resultSeries.SeriesInstanceUID !== seriesInstanceUIDStr
|
||||
) {
|
||||
isValid = false;
|
||||
break;
|
||||
}
|
||||
}
|
||||
return isValid;
|
||||
};
|
||||
|
||||
const { series = [], displaySets = [] } = study;
|
||||
const firstSeries = isFilterStrategy ? series[0] : displaySets[0];
|
||||
const arrayToInspect = isFilterStrategy ? series : displaySets;
|
||||
const validateMethod = isFilterStrategy
|
||||
? validateFilterApplied
|
||||
: validatePromoteApplied;
|
||||
|
||||
if (!firstSeries || firstSeries.SeriesInstanceUID !== seriesInstanceUID) {
|
||||
if (!arrayToInspect) {
|
||||
applied = false;
|
||||
} else {
|
||||
applied = validateMethod();
|
||||
}
|
||||
|
||||
return applied;
|
||||
@@ -155,12 +192,6 @@ const _updateStudyDisplaySets = (study, studyMetadata) => {
|
||||
if (study.derivedDisplaySets) {
|
||||
studyMetadata._addDerivedDisplaySets(study.derivedDisplaySets);
|
||||
}
|
||||
|
||||
studyMetadata.setDisplaySets(study.displaySets);
|
||||
};
|
||||
|
||||
const _sortStudyDisplaySet = (study, studyMetadata) => {
|
||||
studyMetadata.sortDisplaySets(study.displaySets);
|
||||
};
|
||||
|
||||
const _thinStudyData = study => {
|
||||
@@ -221,7 +252,7 @@ function ViewerRetrieveStudyData({
|
||||
// Show message in case not promoted neither filtered but should to
|
||||
_showUserMessage(
|
||||
isQueryParamApplied,
|
||||
'Query parameters were not applied. Using original series list for given study.',
|
||||
'Query parameters were not totally applied. It might be using original series list for given study.',
|
||||
snackbarContext
|
||||
);
|
||||
|
||||
@@ -233,7 +264,7 @@ function ViewerRetrieveStudyData({
|
||||
* Method to process studies. It will update displaySet, studyMetadata, load remaining series, ...
|
||||
* @param {Array} studiesData Array of studies retrieved from server
|
||||
* @param {Object} [filters] - Object containing filters to be applied
|
||||
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
|
||||
* @param {string} [filters.seriesInstanceUID] - series instance uid to filter results against
|
||||
*/
|
||||
const processStudies = (studiesData, filters) => {
|
||||
if (Array.isArray(studiesData) && studiesData.length > 0) {
|
||||
@@ -299,7 +330,6 @@ function ViewerRetrieveStudyData({
|
||||
const filters = {};
|
||||
// Use the first, discard others
|
||||
const seriesInstanceUID = seriesInstanceUIDs && seriesInstanceUIDs[0];
|
||||
|
||||
const retrieveParams = [server, studyInstanceUIDs];
|
||||
|
||||
if (seriesInstanceUID) {
|
||||
|
||||
@@ -29,7 +29,9 @@ import OHIFDicomSegmentationExtension from '@ohif/extension-dicom-segmentation';
|
||||
import OHIFDicomRtExtension from '@ohif/extension-dicom-rt';
|
||||
import OHIFDicomMicroscopyExtension from '@ohif/extension-dicom-microscopy';
|
||||
import OHIFDicomPDFExtension from '@ohif/extension-dicom-pdf';
|
||||
import OHIFDicomP10DownloaderExtension from '@ohif/extension-dicom-p10-downloader';
|
||||
// Add this for Debugging purposes:
|
||||
//import OHIFDebuggingExtension from '@ohif/extension-debugging';
|
||||
import { version } from '../package.json';
|
||||
|
||||
/*
|
||||
* Default Settings
|
||||
@@ -38,6 +40,8 @@ let config = {};
|
||||
|
||||
if (window) {
|
||||
config = window.config || {};
|
||||
|
||||
window.version = version;
|
||||
}
|
||||
|
||||
const appProps = {
|
||||
@@ -49,7 +53,7 @@ const appProps = {
|
||||
OHIFDicomPDFExtension,
|
||||
OHIFDicomSegmentationExtension,
|
||||
OHIFDicomRtExtension,
|
||||
OHIFDicomP10DownloaderExtension,
|
||||
//OHIFDebuggingExtension,
|
||||
],
|
||||
};
|
||||
|
||||
|
||||
@@ -194,7 +194,6 @@ const _mapStudiesToNewFormat = studies => {
|
||||
study.displaySets =
|
||||
study.displaySets ||
|
||||
studyMetadata.createDisplaySets(sopClassHandlerModules);
|
||||
studyMetadata.setDisplaySets(study.displaySets);
|
||||
|
||||
studyMetadataManager.add(studyMetadata);
|
||||
uniqueStudyUIDs.add(study.StudyInstanceUID);
|
||||
|
||||
@@ -1247,34 +1247,13 @@
|
||||
pirates "^4.0.0"
|
||||
source-map-support "^0.5.9"
|
||||
|
||||
"@babel/runtime@7.1.2":
|
||||
version "7.1.2"
|
||||
resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.1.2.tgz#81c89935f4647706fc54541145e6b4ecfef4b8e3"
|
||||
integrity sha512-Y3SCjmhSupzFB6wcv1KmmFucH6gDVnI30WjOcicV10ju0cZjak3Jcs67YLIXBrmZYw1xCrVeJPbycFwrqNyxpg==
|
||||
dependencies:
|
||||
regenerator-runtime "^0.12.0"
|
||||
|
||||
"@babel/runtime@7.6.0":
|
||||
version "7.6.0"
|
||||
resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.6.0.tgz#4fc1d642a9fd0299754e8b5de62c631cf5568205"
|
||||
integrity sha512-89eSBLJsxNxOERC0Op4vd+0Bqm6wRMqMbFtV3i0/fbaWw/mJ8Q3eBvgX0G4SyrOOLCtbu98HspF8o09MRT+KzQ==
|
||||
dependencies:
|
||||
regenerator-runtime "^0.13.2"
|
||||
|
||||
"@babel/runtime@^7.0.0", "@babel/runtime@^7.1.2", "@babel/runtime@^7.2.0", "@babel/runtime@^7.3.1", "@babel/runtime@^7.4.0", "@babel/runtime@^7.4.2", "@babel/runtime@^7.4.4", "@babel/runtime@^7.4.5", "@babel/runtime@^7.5.5":
|
||||
"@babel/runtime@7.1.2", "@babel/runtime@7.5.5", "@babel/runtime@7.6.0", "@babel/runtime@^7.0.0", "@babel/runtime@^7.1.2", "@babel/runtime@^7.2.0", "@babel/runtime@^7.3.1", "@babel/runtime@^7.4.0", "@babel/runtime@^7.4.2", "@babel/runtime@^7.4.4", "@babel/runtime@^7.4.5", "@babel/runtime@^7.5.5", "@babel/runtime@^7.6.0", "@babel/runtime@^7.6.3", "@babel/runtime@^7.7.2", "@babel/runtime@^7.8.4", "@babel/runtime@^7.8.7", "@babel/runtime@^7.9.6":
|
||||
version "7.5.5"
|
||||
resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.5.5.tgz#74fba56d35efbeca444091c7850ccd494fd2f132"
|
||||
integrity sha512-28QvEGyQyNkB0/m2B4FU7IEZGK2NUrcMtT6BZEFALTguLk+AUT6ofsHtPk5QyjAdUkpMJ+/Em+quwz4HOt30AQ==
|
||||
dependencies:
|
||||
regenerator-runtime "^0.13.2"
|
||||
|
||||
"@babel/runtime@^7.6.0", "@babel/runtime@^7.6.3", "@babel/runtime@^7.7.2", "@babel/runtime@^7.8.4", "@babel/runtime@^7.8.7", "@babel/runtime@^7.9.6":
|
||||
version "7.10.5"
|
||||
resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.10.5.tgz#303d8bd440ecd5a491eae6117fd3367698674c5c"
|
||||
integrity sha512-otddXKhdNn7d0ptoFRHtMLa8LqDxLYwTjB4nYgM1yy5N6gU/MUf8zqyyLltCH3yAVitBzmwK4us+DD0l/MauAg==
|
||||
dependencies:
|
||||
regenerator-runtime "^0.13.4"
|
||||
|
||||
"@babel/template@^7.0.0", "@babel/template@^7.1.0", "@babel/template@^7.4.0", "@babel/template@^7.4.4", "@babel/template@^7.6.0":
|
||||
version "7.6.0"
|
||||
resolved "https://registry.yarnpkg.com/@babel/template/-/template-7.6.0.tgz#7f0159c7f5012230dad64cca42ec9bdb5c9536e6"
|
||||
@@ -5971,10 +5950,10 @@ cornerstone-math@^0.1.8:
|
||||
resolved "https://registry.yarnpkg.com/cornerstone-math/-/cornerstone-math-0.1.8.tgz#68ab1f9e4fdcd7c5cb23a0d2eb4263f9f894f1c5"
|
||||
integrity sha512-x7NEQHBtVG7j1yeyj/aRoKTpXv1Vh2/H9zNLMyqYJDtJkNng8C4Q8M3CgZ1qer0Yr7eVq2x+Ynmj6kfOm5jXKw==
|
||||
|
||||
cornerstone-tools@4.15.1:
|
||||
version "4.15.1"
|
||||
resolved "https://registry.yarnpkg.com/cornerstone-tools/-/cornerstone-tools-4.15.1.tgz#f0b1026da9c7758defc088bb2f1e78426a23d91e"
|
||||
integrity sha512-fJuTUJW/NDSD520jPB++tX//Kq80jPDngChHZrhx2xjj/9dCnexD9kmTX30Z0WUq0a2JEHZ6FlcOX38kSmw1hQ==
|
||||
cornerstone-tools@^4.20.1:
|
||||
version "4.20.1"
|
||||
resolved "https://registry.yarnpkg.com/cornerstone-tools/-/cornerstone-tools-4.20.1.tgz#90f6c28356622eac037683b19f9175f85d33dff7"
|
||||
integrity sha512-SyQsrg3bnGHUvWGZpUq7ia7/gj12S9zQFK2VMhpyAYxK9pWz+PRv8HBi0eEe/fWGAo/Vc62IRkdP3uF9MJlqiQ==
|
||||
dependencies:
|
||||
"@babel/runtime" "7.1.2"
|
||||
cornerstone-math "0.1.7"
|
||||
@@ -6560,10 +6539,10 @@ dateformat@^3.0.0:
|
||||
resolved "https://registry.yarnpkg.com/dateformat/-/dateformat-3.0.3.tgz#a6e37499a4d9a9cf85ef5872044d62901c9889ae"
|
||||
integrity sha512-jyCETtSl3VMZMWeRo7iY1FL19ges1t55hMo5yaam4Jrsm5EPL89UQkoQRyiI+Yf4k8r2ZpdngkV8hr1lIdjb3Q==
|
||||
|
||||
dcmjs@0.16.0:
|
||||
version "0.16.0"
|
||||
resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.16.0.tgz#714755d006c3a49cf65ef13e627ff7a23151d35a"
|
||||
integrity sha512-41nY3Isg5i5FoSd1s67aUgUHi146r+fb8JuiRvDsxvm7MEkkdjIzMYMtxjsrVwKRW1xRH+x34nxbV9+8cc7WQw==
|
||||
dcmjs@0.16.3:
|
||||
version "0.16.3"
|
||||
resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.16.3.tgz#ef44ccc4988a473fd40e1601122c57f2babded11"
|
||||
integrity sha512-pMQGifMpMW9i9ufCdUoEPHrLWnm6ilnpfLqUc+PPoWr7OnuBhiRVRunbv39oTtFDZOLhQ2Ampm7UrkidWAbqiA==
|
||||
dependencies:
|
||||
"@babel/polyfill" "^7.8.3"
|
||||
"@babel/runtime" "^7.8.4"
|
||||
@@ -6803,6 +6782,11 @@ detab@2.0.2, detab@^2.0.0:
|
||||
dependencies:
|
||||
repeat-string "^1.5.4"
|
||||
|
||||
detect-browser@5.1.1:
|
||||
version "5.1.1"
|
||||
resolved "https://registry.yarnpkg.com/detect-browser/-/detect-browser-5.1.1.tgz#a800db91d3fd60d0861669f5984f1be9ffbe009c"
|
||||
integrity sha512-5n2aWI57qC3kZaK4j2zYsG6L1LrxgLptGCNhMQgdKhVn6cSdcq43pp6xHPfTHG3TYM6myF4tIPWiZtfdVDgb9w==
|
||||
|
||||
detect-file@^1.0.0:
|
||||
version "1.0.0"
|
||||
resolved "https://registry.yarnpkg.com/detect-file/-/detect-file-1.0.0.tgz#f0d66d03672a825cb1b73bdb3fe62310c8e552b7"
|
||||
@@ -15617,13 +15601,14 @@ react-codemirror2@^6.0.0:
|
||||
resolved "https://registry.yarnpkg.com/react-codemirror2/-/react-codemirror2-6.0.0.tgz#180065df57a64026026cde569a9708fdf7656525"
|
||||
integrity sha512-D7y9qZ05FbUh9blqECaJMdDwKluQiO3A9xB+fssd5jKM7YAXucRuEOlX32mJQumUvHUkHRHqXIPBjm6g0FW0Ag==
|
||||
|
||||
react-cornerstone-viewport@2.3.9:
|
||||
version "2.3.9"
|
||||
resolved "https://registry.yarnpkg.com/react-cornerstone-viewport/-/react-cornerstone-viewport-2.3.9.tgz#f9761da8e536f0a217137c6ca1a983f5882249f9"
|
||||
integrity sha512-qrhq8CbX/jq6b93cQjV2qC/mhHOvFBpxzxcHlvHzEQZt/rmRMcaYxCqjpNaNbUmmBu61wNkxesUVsggkPTTcqg==
|
||||
react-cornerstone-viewport@4.0.2:
|
||||
version "4.0.2"
|
||||
resolved "https://registry.yarnpkg.com/react-cornerstone-viewport/-/react-cornerstone-viewport-4.0.2.tgz#49bc8f8464164d8e779138dd9244d5c2524e0418"
|
||||
integrity sha512-mF/piahoPG5U5TbxVMtc15bXrQZxcaPycbu4i4KD2rZkiWh1Zs24ryY1S+lFlDB/RcOAm0u+luEEt1tOg8F+UQ==
|
||||
dependencies:
|
||||
classnames "^2.2.6"
|
||||
date-fns "^2.2.1"
|
||||
lodash.debounce "^4.0.8"
|
||||
prop-types "^15.7.2"
|
||||
react-resize-detector "^4.2.1"
|
||||
|
||||
@@ -16067,10 +16052,10 @@ react-transition-group@^4.1.1:
|
||||
loose-envify "^1.4.0"
|
||||
prop-types "^15.6.2"
|
||||
|
||||
react-vtkjs-viewport@^0.9.0:
|
||||
version "0.9.0"
|
||||
resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.9.0.tgz#5a7890643e511946f960db6b05142318be2dfe80"
|
||||
integrity sha512-kjpNr1n+eW0nU736HH07IsSYQXphxfn/RBvKtpBer9tNsl+FyLH8h+uY8KWdv8kVBHkEoaH6/srxB0JBa8l+jA==
|
||||
react-vtkjs-viewport@^0.10.4:
|
||||
version "0.10.4"
|
||||
resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.10.4.tgz#eb038b0bf5c384bd3b45f2a0a57f52c682607fea"
|
||||
integrity sha512-J1WxwHbjlttEWvdkM33DJx8QxHr3J7HR6wFSDVBDKY7McK2lwDAdRN8wSqy2BVNILlyurUUVwg2tK2txiJ+tuw==
|
||||
dependencies:
|
||||
date-fns "^2.2.1"
|
||||
gl-matrix "^3.1.0"
|
||||
@@ -16433,11 +16418,6 @@ regenerator-runtime@^0.11.0, regenerator-runtime@^0.11.1:
|
||||
resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.11.1.tgz#be05ad7f9bf7d22e056f9726cee5017fbf19e2e9"
|
||||
integrity sha512-MguG95oij0fC3QV3URf4V2SDYGJhJnJGqvIIgdECeODCT98wSWDAJ94SSuVpYQUoTcGUIL6L4yNB7j1DFFHSBg==
|
||||
|
||||
regenerator-runtime@^0.12.0:
|
||||
version "0.12.1"
|
||||
resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.12.1.tgz#fa1a71544764c036f8c49b13a08b2594c9f8a0de"
|
||||
integrity sha512-odxIc1/vDlo4iZcfXqRYFj0vpXFNoGdKMAUieAlFYO6m/nl5e9KR/beGf41z4a1FI+aQgtjhuaSlDxQ0hmkrHg==
|
||||
|
||||
regenerator-runtime@^0.13.1, regenerator-runtime@^0.13.2, regenerator-runtime@^0.13.4:
|
||||
version "0.13.5"
|
||||
resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.13.5.tgz#d878a1d094b4306d10b9096484b33ebd55e26697"
|
||||
|
||||
Reference in new issue
Block a user