Compare commits

..
Author SHA1 Message Date
ohif-bot fa4b03d62d chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.8.2
 - @ohif/extension-dicom-html@1.2.3
 - @ohif/extension-dicom-rt@0.2.1
 - @ohif/extension-dicom-segmentation@0.3.1
 - @ohif/extension-vtk@1.6.3
 - @ohif/core@2.9.8
 - @ohif/viewer@4.2.5
2020-06-15 15:44:36 +00:00
Igor OctavianoandJames Petts 698e900b85 fix: 🐛 Disable seg panel when data for seg unavailable (#1732)
* Add disable state for invalid data

* fix: 🐛 Disable seg panel when data for seg unavailable

We need to gracefully handle errors if data for segmentation is
unavailable and disable the segmentation panel

✅ Closes: #1728

* Bump dcmjs version

dcmjs
  * @ohif/core: ^0.12.2 → ^0.13.0
  * @ohif/extension-cornerstone: ^0.12.3 → ^0.13.0
  * @ohif/extension-dicom-html: ^0.12.3 → ^0.13.0
  * @ohif/extension-dicom-rt: ^0.12.3 → ^0.13.0
  * @ohif/extension-dicom-segmentation: ^0.12.2 → ^0.13.0
  * @ohif/extension-vtk: ^0.12.2 → ^0.13.0
  * @ohif/viewer: ^0.12.2 → ^0.13.0

* Remove error barrier

* Fix e2e

Co-authored-by: James Petts <jamesapetts@gmail.com>
2020-06-15 17:41:36 +02:00
ohif-bot b7d47383c5 chore(release): publish [skip ci]
- @ohif/viewer@4.2.4
2020-06-15 12:47:19 +00:00
Rodrigo AntinarelliandJames Petts 6123741765 fix: OIDC Redirect erases query parameters (#1773)
* fix: OIDC Redirect erases query parameters

* prevent issues

Co-authored-by: James Petts <jamesapetts@gmail.com>
2020-06-15 14:43:10 +02:00
21 changed files with 186 additions and 72 deletions

No files matched your search

+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [2.8.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.1...@ohif/extension-cornerstone@2.8.2) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
## [2.8.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.0...@ohif/extension-cornerstone@2.8.1) (2020-06-04)
+2 -2
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-cornerstone",
"version": "2.8.1",
"version": "2.8.2",
"description": "OHIF extension for Cornerstone",
"author": "OHIF",
"license": "MIT",
@@ -36,7 +36,7 @@
"cornerstone-math": "^0.1.8",
"cornerstone-tools": "4.15.1",
"cornerstone-wado-image-loader": "^3.1.0",
"dcmjs": "^0.12.3",
"dcmjs": "0.13.0",
"dicom-parser": "^1.8.3",
"hammerjs": "^2.0.8",
"prop-types": "^15.6.2",
+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.2.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.2...@ohif/extension-dicom-html@1.2.3) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
## [1.2.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.1...@ohif/extension-dicom-html@1.2.2) (2020-05-04)
+2 -2
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-html",
"version": "1.2.2",
"version": "1.2.3",
"description": "OHIF extension for rendering structured reports to HTML",
"author": "OHIF",
"license": "MIT",
@@ -29,7 +29,7 @@
},
"peerDependencies": {
"@ohif/core": "^0.50.0",
"dcmjs": "^0.12.3",
"dcmjs": "0.13.0",
"prop-types": "^15.6.2",
"react": "^16.8.6",
"react-dom": "^16.8.6"
+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [0.2.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.0...@ohif/extension-dicom-rt@0.2.1) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
# [0.2.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.1.4...@ohif/extension-dicom-rt@0.2.0) (2020-06-04)
+2 -2
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-rt",
"version": "0.2.0",
"version": "0.2.1",
"description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
"author": "OHIF",
"license": "MIT",
@@ -31,7 +31,7 @@
"@ohif/core": "^0.50.0",
"cornerstone-core": "^2.2.8",
"cornerstone-tools": "4.15.1",
"dcmjs": "^0.12.3",
"dcmjs": "0.13.0",
"prop-types": "^15.6.2",
"react": "^16.8.6",
"react-dom": "^16.8.6"
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [0.3.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.0...@ohif/extension-dicom-segmentation@0.3.1) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
# [0.3.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.2.6...@ohif/extension-dicom-segmentation@0.3.0) (2020-06-04)
+2 -2
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-segmentation",
"version": "0.3.0",
"version": "0.3.1",
"description": "OHIF extension for viewing segmentations in the 2D MPR view",
"author": "OHIF",
"license": "MIT",
@@ -31,7 +31,7 @@
"@ohif/core": "^0.50.0",
"cornerstone-core": "^2.2.8",
"cornerstone-tools": "4.15.1",
"dcmjs": "^0.12.2",
"dcmjs": "0.13.0",
"prop-types": "^15.6.2",
"react": "^16.8.6",
"react-dom": "^16.8.6"
@@ -8,6 +8,11 @@
flex-direction: column;
}
.dcmseg-segmentation-panel.disabled {
opacity: 0.6;
pointer-events: none;
}
.dcmseg-segmentation-panel h3 {
padding-left: 20px;
margin-top: 0;
@@ -77,7 +77,8 @@ const SegmentationPanel = ({
labelmapList: [],
segmentList: [],
cachedSegmentsProperties: [],
isLoading: false
isLoading: false,
isDisabled: true
});
useEffect(() => {
@@ -139,39 +140,45 @@ const SegmentationPanel = ({
const refreshSegmentations = useCallback(() => {
const module = cornerstoneTools.getModule('segmentation');
const activeViewport = viewports[activeIndex];
const studyMetadata = studyMetadataManager.get(
activeViewport.StudyInstanceUID
);
const firstImageId = studyMetadata.getFirstImageId(
activeViewport.displaySetInstanceUID
);
const brushStackState = module.state.series[firstImageId];
if (brushStackState) {
const labelmap3D =
brushStackState.labelmaps3D[brushStackState.activeLabelmapIndex];
const labelmapList = getLabelmapList(
brushStackState,
firstImageId,
activeViewport
const isDisabled = !activeViewport || !activeViewport.StudyInstanceUID;
if (!isDisabled) {
const studyMetadata = studyMetadataManager.get(
activeViewport.StudyInstanceUID
);
const segmentList = getSegmentList(
labelmap3D,
firstImageId,
brushStackState
const firstImageId = studyMetadata.getFirstImageId(
activeViewport.displaySetInstanceUID
);
setState(state => ({
...state,
brushStackState,
selectedSegmentation: brushStackState.activeLabelmapIndex,
labelmapList,
segmentList,
}));
} else {
setState(state => ({
...state,
labelmapList: [],
segmentList: [],
}));
const brushStackState = module.state.series[firstImageId];
if (brushStackState) {
const labelmap3D =
brushStackState.labelmaps3D[brushStackState.activeLabelmapIndex];
const labelmapList = getLabelmapList(
brushStackState,
firstImageId,
activeViewport
);
const segmentList = getSegmentList(
labelmap3D,
firstImageId,
brushStackState
);
setState(state => ({
...state,
brushStackState,
selectedSegmentation: brushStackState.activeLabelmapIndex,
labelmapList,
segmentList,
isDisabled
}));
} else {
setState(state => ({
...state,
labelmapList: [],
segmentList: [],
isDisabled
}));
}
}
}, [
viewports,
@@ -181,7 +188,7 @@ const SegmentationPanel = ({
useEffect(() => {
refreshSegmentations();
}, [viewports, activeIndex, state.selectedSegmentation, activeContexts, state.isLoading]);
}, [viewports, activeIndex, isOpen, state.selectedSegmentation, activeContexts, state.isLoading]);
/* Handle open/closed panel behaviour */
useEffect(() => {
@@ -507,7 +514,7 @@ const SegmentationPanel = ({
);
} else {
return (
<div className="dcmseg-segmentation-panel">
<div className={`dcmseg-segmentation-panel ${state.isDisabled && 'disabled'}`}>
<Icon
className="cog-icon"
name="cog"
+1 -1
View File
@@ -24,7 +24,7 @@ export default {
return toolbarModule;
},
getPanelModule({ commandsManager, api, servicesManager }) {
const { UINotificationService } = servicesManager;
const { UINotificationService } = servicesManager.services;
const ExtendedSegmentationPanel = props => {
const { activeContexts } = api.hooks.useAppContext();
+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [1.6.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.2...@ohif/extension-vtk@1.6.3) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
## [1.6.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.1...@ohif/extension-vtk@1.6.2) (2020-06-05)
**Note:** Version bump only for package @ohif/extension-vtk
+3 -3
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-vtk",
"version": "1.6.2",
"version": "1.6.3",
"description": "OHIF extension for VTK.js",
"author": "OHIF",
"license": "MIT",
@@ -35,7 +35,7 @@
"cornerstone-core": "^2.2.8",
"cornerstone-tools": "4.15.1",
"cornerstone-wado-image-loader": "^3.1.0",
"dcmjs": "^0.12.2",
"dcmjs": "0.13.0",
"dicom-parser": "^1.8.3",
"i18next": "^17.0.3",
"i18next-browser-languagedetector": "^3.0.1",
@@ -53,7 +53,7 @@
"react-vtkjs-viewport": "^0.9.0"
},
"devDependencies": {
"@ohif/core": "^2.9.7",
"@ohif/core": "^2.9.8",
"@ohif/ui": "^1.5.1",
"cornerstone-tools": "4.15.1",
"cornerstone-wado-image-loader": "^3.1.0",
+11
View File
@@ -3,6 +3,17 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [2.9.8](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.7...@ohif/core@2.9.8) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
## [2.9.7](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.6...@ohif/core@2.9.7) (2020-06-04)
**Note:** Version bump only for package @ohif/core
+2 -2
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/core",
"version": "2.9.7",
"version": "2.9.8",
"description": "Generic business logic for web-based medical imaging applications",
"author": "OHIF Core Team",
"license": "MIT",
@@ -39,7 +39,7 @@
"dependencies": {
"@babel/runtime": "^7.5.5",
"ajv": "^6.10.0",
"dcmjs": "^0.12.2",
"dcmjs": "0.13.0",
"dicomweb-client": "^0.6.0",
"immer": "6.0.2",
"isomorphic-base64": "^1.0.2",
+22
View File
@@ -3,6 +3,28 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [4.2.5](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.4...@ohif/viewer@4.2.5) (2020-06-15)
### Bug Fixes
* 🐛 Disable seg panel when data for seg unavailable ([#1732](https://github.com/OHIF/Viewers/issues/1732)) ([698e900](https://github.com/OHIF/Viewers/commit/698e900b85121d3c2a46747c443ef69fb7a8c95b)), closes [#1728](https://github.com/OHIF/Viewers/issues/1728)
## [4.2.4](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.3...@ohif/viewer@4.2.4) (2020-06-15)
### Bug Fixes
* OIDC Redirect erases query parameters ([#1773](https://github.com/OHIF/Viewers/issues/1773)) ([6123741](https://github.com/OHIF/Viewers/commit/6123741765e81d0bea8fbd5dbb0f310aaca0fb33))
## [4.2.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.2...@ohif/viewer@4.2.3) (2020-06-05)
**Note:** Version bump only for package @ohif/viewer
@@ -52,7 +52,7 @@ describe('OHIF Study List', function() {
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(15); // TODO: Where are you hiding MISTER^MR?
expect($list.length).to.be.eq(16); // TODO: Where are you hiding MISTER^MR?
expect($list).to.contain('MR');
});
});
@@ -147,7 +147,7 @@ describe('OHIF Study List', function() {
//Wait result list to be displayed
cy.waitStudyList();
cy.get('@searchResult').should($list => {
expect($list.length).to.be.eq(15); // TODO: Where are you hiding MISTER^MR?
expect($list.length).to.be.eq(16); // TODO: Where are you hiding MISTER^MR?
expect($list).to.contain('MR');
});
});
+8 -8
View File
@@ -1,6 +1,6 @@
{
"name": "@ohif/viewer",
"version": "4.2.3",
"version": "4.2.5",
"description": "OHIF Viewer",
"author": "OHIF Contributors",
"license": "MIT",
@@ -48,16 +48,16 @@
},
"dependencies": {
"@babel/runtime": "^7.5.5",
"@ohif/core": "^2.9.7",
"@ohif/extension-cornerstone": "^2.8.1",
"@ohif/extension-dicom-html": "^1.2.2",
"@ohif/core": "^2.9.8",
"@ohif/extension-cornerstone": "^2.8.2",
"@ohif/extension-dicom-html": "^1.2.3",
"@ohif/extension-dicom-microscopy": "^0.51.0",
"@ohif/extension-dicom-p10-downloader": "^0.1.1",
"@ohif/extension-dicom-pdf": "^1.0.3",
"@ohif/extension-dicom-rt": "^0.2.0",
"@ohif/extension-dicom-segmentation": "^0.3.0",
"@ohif/extension-dicom-rt": "^0.2.1",
"@ohif/extension-dicom-segmentation": "^0.3.1",
"@ohif/extension-lesion-tracker": "^0.2.0",
"@ohif/extension-vtk": "^1.6.2",
"@ohif/extension-vtk": "^1.6.3",
"@ohif/i18n": "^0.52.8",
"@ohif/ui": "^1.5.1",
"@tanem/react-nprogress": "^1.1.25",
@@ -67,7 +67,7 @@
"cornerstone-math": "^0.1.8",
"cornerstone-tools": "4.15.1",
"cornerstone-wado-image-loader": "^3.1.0",
"dcmjs": "^0.12.2",
"dcmjs": "0.13.0",
"dicom-parser": "^1.8.3",
"dicomweb-client": "^0.4.4",
"hammerjs": "^2.0.8",
+20 -8
View File
@@ -52,10 +52,13 @@ class OHIFStandaloneViewer extends Component {
const { appConfig = {} } = this.context;
const userNotLoggedIn = userManager && (!user || user.expired);
if (userNotLoggedIn) {
const pathname = this.props.location.pathname;
const { pathname, search } = this.props.location;
if (pathname !== '/callback') {
sessionStorage.setItem('ohif-redirect-to', pathname);
sessionStorage.setItem(
'ohif-redirect-to',
JSON.stringify({ pathname, search })
);
}
return (
@@ -103,12 +106,21 @@ class OHIFStandaloneViewer extends Component {
userManager.removeUser().then(() => {
if (targetLinkUri !== null) {
const ohifRedirectTo = {
pathname: new URL(targetLinkUri).pathname,
};
sessionStorage.setItem(
'ohif-redirect-to',
new URL(targetLinkUri).pathname
JSON.stringify(ohifRedirectTo)
);
} else {
sessionStorage.setItem('ohif-redirect-to', '/');
const ohifRedirectTo = {
pathname: '/',
};
sessionStorage.setItem(
'ohif-redirect-to',
JSON.stringify(ohifRedirectTo)
);
}
if (loginHint !== null) {
@@ -191,10 +203,10 @@ class OHIFStandaloneViewer extends Component {
{match === null ? (
<></>
) : (
<ErrorBoundary context={match.url}>
<Component match={match} location={this.props.location} />
</ErrorBoundary>
)}
<ErrorBoundary context={match.url}>
<Component match={match} location={this.props.location} />
</ErrorBoundary>
)}
</CSSTransition>
)}
</Route>
+4 -2
View File
@@ -14,9 +14,11 @@ class CallbackPage extends Component {
<CallbackComponent
userManager={this.props.userManager}
successCallback={() => {
const pathname = sessionStorage.getItem('ohif-redirect-to');
const { pathname, search = '' } = JSON.parse(
sessionStorage.getItem('ohif-redirect-to')
);
this.props.history.push(pathname);
this.props.history.push({ pathname, search });
}}
errorCallback={error => {
//this.props.history.push("/");
+4 -4
View File
@@ -6534,10 +6534,10 @@ dateformat@^3.0.0:
resolved "https://registry.yarnpkg.com/dateformat/-/dateformat-3.0.3.tgz#a6e37499a4d9a9cf85ef5872044d62901c9889ae"
integrity sha512-jyCETtSl3VMZMWeRo7iY1FL19ges1t55hMo5yaam4Jrsm5EPL89UQkoQRyiI+Yf4k8r2ZpdngkV8hr1lIdjb3Q==
dcmjs@^0.12.2:
version "0.12.2"
resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.12.2.tgz#1c16e19c27ff43202abc7cd25c5ecd6d8bf7672e"
integrity sha512-B7cEVCfDi3mOLKoBYUMYy+6COjLZhtKaesNpq5XNA4IbEH4EJYVweJfiI9gsR5hypv9LAPg72xG/xrbqjy8TgQ==
dcmjs@0.13.0:
version "0.13.0"
resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.13.0.tgz#16310a137a0fe800ccb2d4751a28cf023765f347"
integrity sha512-U+qGwlnkG8vwDKB4R7ryqQUtWQM1JHMKMBw5+Oy8wcPxS+vDmaRTqIcAItMh1DcZ0ia8RN0VI5TBVCOJl7GVhA==
dependencies:
"@babel/polyfill" "^7.8.3"
"@babel/runtime" "^7.8.4"