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fc015326c7 |
No files matched your search
@@ -62,7 +62,7 @@ echo "Done generating documentation output"
|
||||
echo 'STARTING PUBLISH'
|
||||
|
||||
# WILL ALWAYS FAIL IF INITIATED FROM PR BRANCH
|
||||
./node_modules/.bin/gh-pages \
|
||||
npx gh-pages \
|
||||
--silent \
|
||||
--repo https://$GITHUB_TOKEN@github.com/OHIF/Viewers.git \
|
||||
--message 'Autogenerated Message: [ci skip]' \
|
||||
|
||||
+225
-180
@@ -13,53 +13,54 @@ version: 2.1
|
||||
##
|
||||
orbs:
|
||||
codecov: codecov/codecov@1.0.5
|
||||
cypress: cypress-io/cypress@1.10.0
|
||||
cypress: cypress-io/cypress@1.11.0
|
||||
executors:
|
||||
# Custom executor to override Cypress config
|
||||
deploy-to-prod-executor:
|
||||
docker:
|
||||
- image: 'cypress/browsers:node10.16.0-chrome77'
|
||||
environment:
|
||||
CYPRESS_BASE_URL: https://ohif-staging.netlify.com/
|
||||
|
||||
defaults: &defaults
|
||||
docker:
|
||||
- image: circleci/node:12.9.1
|
||||
environment:
|
||||
TERM: xterm # Enable colors in term
|
||||
QUICK_BUILD: true
|
||||
working_directory: ~/repo
|
||||
|
||||
jobs:
|
||||
###
|
||||
# Workflow: PR_CHECKS
|
||||
###
|
||||
UNIT_TESTS:
|
||||
<<: *defaults
|
||||
steps:
|
||||
# Update yarn
|
||||
- run: yarn -v
|
||||
#- run: rm -rf ~/.yarn && npm i -g yarn && yarn -v
|
||||
|
||||
# Enable yarn workspaces
|
||||
- run: yarn config set workspaces-experimental true
|
||||
|
||||
# Checkout code and ALL Git Tags
|
||||
- checkout:
|
||||
post:
|
||||
- git fetch --all
|
||||
|
||||
- restore_cache:
|
||||
name: Restore Yarn and Cypress Package Cache
|
||||
keys:
|
||||
# when lock file changes, use increasingly general patterns to restore cache
|
||||
- yarn-packages-{{ checksum "yarn.lock" }}
|
||||
- yarn-packages-
|
||||
|
||||
- run:
|
||||
name: Install Dependencies
|
||||
command: yarn install --frozen-lockfile
|
||||
|
||||
- save_cache:
|
||||
name: Save Yarn Package Cache
|
||||
paths:
|
||||
- ~/.cache ## Cache yarn and Cypress
|
||||
key: yarn-packages-{{ checksum "yarn.lock" }}
|
||||
|
||||
# RUN TESTS
|
||||
- run:
|
||||
name: 'JavaScript Test Suite'
|
||||
command: yarn run test:unit:ci
|
||||
|
||||
# PLATFORM/VIEWER
|
||||
- run:
|
||||
name: 'VIEWER: Combine report output'
|
||||
@@ -73,7 +74,6 @@ jobs:
|
||||
- codecov/upload:
|
||||
file: '/home/circleci/repo/platform/viewer/coverage/reports'
|
||||
flags: 'viewer'
|
||||
|
||||
# PLATFORM/CORE
|
||||
- run:
|
||||
name: 'CORE: Combine report output'
|
||||
@@ -88,12 +88,12 @@ jobs:
|
||||
file: '/home/circleci/repo/platform/core/coverage/reports'
|
||||
flags: 'core'
|
||||
|
||||
UNIT_TESTS_PERSIST_WORKSPACE:
|
||||
###
|
||||
# Workflow: PR_OPTIONAL_DOCKER_PUBLISH
|
||||
###
|
||||
DOCKER_PR_PUBLISH:
|
||||
<<: *defaults
|
||||
steps:
|
||||
# Update yarn
|
||||
#- run: rm -rf ~/.yarn && npm i -g yarn && yarn -v
|
||||
|
||||
# Enable yarn workspaces
|
||||
- run: yarn config set workspaces-experimental true
|
||||
|
||||
@@ -113,70 +113,152 @@ jobs:
|
||||
name: Install Dependencies
|
||||
command: yarn install --frozen-lockfile
|
||||
|
||||
- setup_remote_docker:
|
||||
docker_layer_caching: false
|
||||
|
||||
- run:
|
||||
name: Build and push Docker image
|
||||
command: |
|
||||
# Remove npm config
|
||||
rm -f ./.npmrc
|
||||
# Set our version number using vars
|
||||
echo $CIRCLE_BUILD_NUM
|
||||
# Build our image, auth, and push
|
||||
docker build --tag ohif/viewer:PR_BUILD-$CIRCLE_BUILD_NUM .
|
||||
echo $DOCKER_PWD | docker login -u $DOCKER_LOGIN --password-stdin
|
||||
docker push ohif/viewer:PR_BUILD-$CIRCLE_BUILD_NUM
|
||||
|
||||
###
|
||||
# Workflow: DEPLOY
|
||||
###
|
||||
BUILD:
|
||||
<<: *defaults
|
||||
steps:
|
||||
# Checkout code and ALL Git Tags
|
||||
- checkout:
|
||||
post:
|
||||
- git fetch --all
|
||||
- restore_cache:
|
||||
name: Restore Yarn and Cypress Package Cache
|
||||
keys:
|
||||
# when lock file changes, use increasingly general patterns to restore cache
|
||||
- yarn-packages-{{ checksum "yarn.lock" }}
|
||||
- yarn-packages-
|
||||
- run:
|
||||
name: Install Dependencies
|
||||
command: yarn install --frozen-lockfile
|
||||
- save_cache:
|
||||
name: Save Yarn Package Cache
|
||||
paths:
|
||||
- ~/.cache ## Cache yarn and Cypress
|
||||
key: yarn-packages-{{ checksum "yarn.lock" }}
|
||||
|
||||
# RUN TESTS
|
||||
# Build & Test
|
||||
- run:
|
||||
name: 'JavaScript Test Suite'
|
||||
command: yarn run test:unit:ci
|
||||
|
||||
# PLATFORM/VIEWER
|
||||
- run:
|
||||
name: 'VIEWER: Combine report output'
|
||||
command: |
|
||||
viewerCov="/home/circleci/repo/platform/viewer/coverage"
|
||||
touch "${viewerCov}/reports"
|
||||
cat "${viewerCov}/clover.xml" >> "${viewerCov}/reports"
|
||||
echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
|
||||
cat "${viewerCov}/lcov.info" >>"${viewerCov}/reports"
|
||||
echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
|
||||
- codecov/upload:
|
||||
file: '/home/circleci/repo/platform/viewer/coverage/reports'
|
||||
flags: 'viewer'
|
||||
|
||||
# PLATFORM/CORE
|
||||
- run:
|
||||
name: 'CORE: Combine report output'
|
||||
command: |
|
||||
coreCov="/home/circleci/repo/platform/core/coverage"
|
||||
touch "${coreCov}/reports"
|
||||
cat "${coreCov}/clover.xml" >> "${coreCov}/reports"
|
||||
echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
|
||||
cat "${coreCov}/lcov.info" >> "${coreCov}/reports"
|
||||
echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
|
||||
- codecov/upload:
|
||||
file: '/home/circleci/repo/platform/core/coverage/reports'
|
||||
flags: 'core'
|
||||
|
||||
name: 'Build the OHIF Viewer'
|
||||
command: yarn run build
|
||||
no_output_timeout: 45m
|
||||
# - run:
|
||||
# name: 'Upload SourceMaps, Send Deploy Notification'
|
||||
# command: |
|
||||
# # export FILE_1=$(find ./build/static/js -type f -name "2.*.js" -exec basename {} \;)
|
||||
# # export FILE_MAIN=$(find ./build/static/js -type f -name "main.*.js" -exec basename {} \;)
|
||||
# # export FILE_RUNTIME_MAIN=$(find ./build/static/js -type f -name "runtime~main.*.js" -exec basename {} \;)
|
||||
# # curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_1.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_1
|
||||
# # curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_MAIN.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_MAIN
|
||||
# # curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_RUNTIME_MAIN.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_RUNTIME_MAIN
|
||||
# curl --request POST https://api.rollbar.com/api/1/deploy/ -F access_token=$ROLLBAR_TOKEN -F environment=$GOOGLE_STORAGE_BUCKET -F revision=$CIRCLE_SHA1 -F local_username=CircleCI
|
||||
# Persist :+1:
|
||||
- persist_to_workspace: &persist_to_workspace
|
||||
- persist_to_workspace:
|
||||
root: ~/repo
|
||||
paths: .
|
||||
paths:
|
||||
- platform/viewer/dist
|
||||
- netlify.toml
|
||||
- .netlify
|
||||
|
||||
NPM_PUBLISH:
|
||||
<<: *defaults
|
||||
DEPLOY_TO_DEV:
|
||||
docker:
|
||||
- image: circleci/node:12.9.1
|
||||
environment:
|
||||
TERM: xterm
|
||||
NETLIFY_SITE_ID: 32708787-c9b0-4634-b50f-7ca41952da77
|
||||
working_directory: ~/repo
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
- run: cd .netlify && npm install
|
||||
- run:
|
||||
cp .netlify/deploy-workflow/_redirects platform/viewer/dist/_redirects
|
||||
- run: cd .netlify && npm run deploy
|
||||
|
||||
DEPLOY_TO_STAGING:
|
||||
docker:
|
||||
- image: circleci/node:12.9.1
|
||||
environment:
|
||||
TERM: xterm
|
||||
NETLIFY_SITE_ID: c7502ae3-b150-493c-8422-05701e44a969
|
||||
working_directory: ~/repo
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
- run: cd .netlify && npm install
|
||||
- run:
|
||||
cp .netlify/deploy-workflow/_redirects platform/viewer/dist/_redirects
|
||||
- run: cd .netlify && npm run deploy
|
||||
|
||||
DEPLOY_TO_PRODUCTION:
|
||||
docker:
|
||||
- image: circleci/node:12.9.1
|
||||
environment:
|
||||
TERM: xterm
|
||||
NETLIFY_SITE_ID: 79c4a5da-5c95-4dc9-84f7-45fd9dfe21b0
|
||||
working_directory: ~/repo
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
- run: cd .netlify && npm install
|
||||
- run:
|
||||
cp .netlify/deploy-workflow/_redirects platform/viewer/dist/_redirects
|
||||
- run: cd .netlify && npm run deploy
|
||||
|
||||
###
|
||||
# Workflow: RELEASE
|
||||
###
|
||||
NPM_PUBLISH:
|
||||
<<: *defaults
|
||||
steps:
|
||||
- run: yarn -v
|
||||
# Checkout code and ALL Git Tags
|
||||
- checkout:
|
||||
post:
|
||||
- git fetch --all
|
||||
# Use increasingly general patterns to restore cache
|
||||
- restore_cache:
|
||||
name: Restore Yarn and Cypress Package Cache
|
||||
keys:
|
||||
- yarn-packages-{{ checksum "yarn.lock" }}
|
||||
- yarn-packages-
|
||||
- run:
|
||||
name: Install Dependencies
|
||||
command: yarn install --frozen-lockfile
|
||||
- save_cache:
|
||||
name: Save Yarn Package Cache
|
||||
paths:
|
||||
- ~/.cache/yarn
|
||||
key: yarn-packages-{{ checksum "yarn.lock" }}
|
||||
- run:
|
||||
name: Avoid hosts unknown for github
|
||||
command:
|
||||
mkdir ~/.ssh/ && echo -e "Host github.com\n\tStrictHostKeyChecking
|
||||
no\n" > ~/.ssh/config
|
||||
- run: git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
|
||||
- run: git config --global user.name "ohif-bot"
|
||||
command: |
|
||||
rm -rf ~/.ssh
|
||||
mkdir ~/.ssh/
|
||||
echo -e "Host github.com\n\tStrictHostKeyChecking no\n" > ~/.ssh/config
|
||||
git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
|
||||
git config --global user.name "ohif-bot"
|
||||
- run:
|
||||
name: Authenticate with registry
|
||||
name: Authenticate with NPM registry
|
||||
command:
|
||||
echo "//registry.npmjs.org/:_authToken=$NPM_TOKEN" > ~/repo/.npmrc
|
||||
- run: npx lerna version
|
||||
- run: npx lerna publish from-package
|
||||
|
||||
# Persist :+1:
|
||||
- persist_to_workspace:
|
||||
root: ~/repo
|
||||
paths: .
|
||||
@@ -184,21 +266,20 @@ jobs:
|
||||
DOCS_PUBLISH:
|
||||
<<: *defaults
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
- checkout
|
||||
- run:
|
||||
name: Avoid hosts unknown for github
|
||||
command:
|
||||
mkdir ~/.ssh/ && echo -e "Host github.com\n\tStrictHostKeyChecking
|
||||
no\n" > ~/.ssh/config
|
||||
- run: git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
|
||||
- run: git config --global user.name "ohif-bot"
|
||||
- run: yarn global add gitbook-cli
|
||||
- run: yarn global add gh-pages
|
||||
command: |
|
||||
rm -rf ~/.ssh
|
||||
mkdir ~/.ssh/
|
||||
echo -e "Host github.com\n\tStrictHostKeyChecking no\n" > ~/.ssh/config
|
||||
git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
|
||||
git config --global user.name "ohif-bot"
|
||||
- run: yarn global add gitbook-cli gh-pages
|
||||
- run: chmod +x ~/repo/.circleci/build-and-publish-docs.sh
|
||||
- run: ~/repo/.circleci/build-and-publish-docs.sh
|
||||
|
||||
DOCKER_PUBLISH:
|
||||
DOCKER_MASTER_PUBLISH:
|
||||
<<: *defaults
|
||||
steps:
|
||||
- attach_workspace:
|
||||
@@ -209,7 +290,8 @@ jobs:
|
||||
name: Build and push Docker image
|
||||
command: |
|
||||
# This file will exist if a new version was published by
|
||||
# our `semantic-release` command in the previous job
|
||||
# our command in the previous job. Created in npm postpublish hook
|
||||
# in the `platform/viewer` project.
|
||||
if [[ ! -e platform/viewer/success_version.txt ]]; then
|
||||
exit 0
|
||||
else
|
||||
@@ -227,55 +309,9 @@ jobs:
|
||||
docker push ohif/$IMAGE_NAME:latest
|
||||
fi
|
||||
|
||||
VIEWER_DEMO_BUILD:
|
||||
<<: *defaults
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
# Build & Test
|
||||
- run:
|
||||
name: 'Build Demo Site'
|
||||
command: yarn run build:demo
|
||||
no_output_timeout: 45m
|
||||
- run:
|
||||
name: 'Upload SourceMaps, Send Deploy Notification'
|
||||
command: |
|
||||
# export FILE_1=$(find ./build/static/js -type f -name "2.*.js" -exec basename {} \;)
|
||||
# export FILE_MAIN=$(find ./build/static/js -type f -name "main.*.js" -exec basename {} \;)
|
||||
# export FILE_RUNTIME_MAIN=$(find ./build/static/js -type f -name "runtime~main.*.js" -exec basename {} \;)
|
||||
# curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_1.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_1
|
||||
# curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_MAIN.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_MAIN
|
||||
# curl https://api.rollbar.com/api/1/sourcemap -F source_map=@build/static/js/$FILE_RUNTIME_MAIN.map -F access_token=$ROLLBAR_TOKEN -F version=$CIRCLE_SHA1 -F minified_url=https://$GOOGLE_STORAGE_BUCKET/static/js/$FILE_RUNTIME_MAIN
|
||||
curl --request POST https://api.rollbar.com/api/1/deploy/ -F access_token=$ROLLBAR_TOKEN -F environment=$GOOGLE_STORAGE_BUCKET -F revision=$CIRCLE_SHA1 -F local_username=CircleCI
|
||||
# Persist :+1:
|
||||
- persist_to_workspace:
|
||||
root: ~/repo
|
||||
paths: .
|
||||
|
||||
VIEWER_DEMO_PUBLISH:
|
||||
working_directory: ~/repo
|
||||
docker:
|
||||
- image: google/cloud-sdk
|
||||
steps:
|
||||
- attach_workspace:
|
||||
at: ~/repo
|
||||
- setup_remote_docker:
|
||||
docker_layer_caching: false
|
||||
- run:
|
||||
name: Deploy latest version to viewer.ohif.org
|
||||
command: |
|
||||
# https://circleci.com/docs/2.0/google-auth/#authorization
|
||||
echo $GCLOUD_SERVICE_KEY | gcloud auth activate-service-account --key-file=-
|
||||
gcloud --quiet config set project ${GOOGLE_PROJECT_ID}
|
||||
gcloud --quiet config set compute/zone ${GOOGLE_COMPUTE_ZONE}
|
||||
# Remove all files in Storage Bucket; Push latest
|
||||
gsutil -m rm gs://$GOOGLE_STORAGE_BUCKET/**
|
||||
gsutil -m rsync -R platform/viewer/dist gs://$GOOGLE_STORAGE_BUCKET
|
||||
|
||||
workflows:
|
||||
version: 2
|
||||
|
||||
# PULL REQUESTS
|
||||
PR_CHECKS:
|
||||
jobs:
|
||||
- UNIT_TESTS:
|
||||
@@ -288,10 +324,13 @@ workflows:
|
||||
# E2E: PWA
|
||||
- cypress/run:
|
||||
name: 'E2E: PWA'
|
||||
executor: cypress/browsers-chrome76
|
||||
browser: chrome
|
||||
pre-steps:
|
||||
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
|
||||
add wait-on' # Use yarn latest
|
||||
yarn: true
|
||||
record: false
|
||||
store_artifacts: false
|
||||
working_directory: platform/viewer
|
||||
build: npx cross-env QUICK_BUILD=true yarn run build
|
||||
@@ -307,14 +346,18 @@ workflows:
|
||||
# E2E: script-tag
|
||||
- cypress/run:
|
||||
name: 'E2E: Script Tag'
|
||||
executor: cypress/browsers-chrome76
|
||||
browser: chrome
|
||||
pre-steps:
|
||||
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
|
||||
add wait-on' # Use yarn latest
|
||||
yarn: true
|
||||
record: false
|
||||
store_artifacts: false
|
||||
working_directory: platform/viewer
|
||||
build: npx cross-env QUICK_BUILD=true yarn run build:package
|
||||
start: yarn run test:e2e:serve
|
||||
spec: 'cypress/integration/common/**/*'
|
||||
wait-on: 'http://localhost:3000'
|
||||
cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
|
||||
no-workspace: true # Don't persist workspace
|
||||
@@ -324,75 +367,77 @@ workflows:
|
||||
requires:
|
||||
- UNIT_TESTS
|
||||
|
||||
# MERGE TO MASTER
|
||||
RELEASE:
|
||||
PR_OPTIONAL_DOCKER_PUBLISH:
|
||||
jobs:
|
||||
- UNIT_TESTS_PERSIST_WORKSPACE:
|
||||
# https://circleci.com/docs/2.0/workflows/#holding-a-workflow-for-a-manual-approval
|
||||
- AWAIT_APPROVAL:
|
||||
type: approval
|
||||
# Update hub.docker.org
|
||||
- DOCKER_PR_PUBLISH:
|
||||
context: Docker Hub
|
||||
requires:
|
||||
- AWAIT_APPROVAL
|
||||
|
||||
###
|
||||
# Our workflow for building, deploying, and promoting builds across our
|
||||
# development, staging, and production environments.
|
||||
###
|
||||
DEPLOY:
|
||||
jobs:
|
||||
- BUILD:
|
||||
filters:
|
||||
branches:
|
||||
only: master
|
||||
# E2E: PWA + Persist
|
||||
- cypress/run:
|
||||
name: 'E2E: PWA'
|
||||
pre-steps:
|
||||
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
|
||||
add wait-on' # Use yarn latest
|
||||
yarn: true
|
||||
record: true
|
||||
store_artifacts: true
|
||||
working_directory: platform/viewer
|
||||
build: npx cross-env QUICK_BUILD=true yarn run build
|
||||
start: yarn run test:e2e:serve
|
||||
wait-on: 'http://localhost:3000'
|
||||
cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
|
||||
no-workspace: true # Don't persist workspace
|
||||
post-steps:
|
||||
- store_artifacts:
|
||||
path: platform/viewer/cypress/screenshots
|
||||
- store_test_results:
|
||||
path: cypress/results
|
||||
- DEPLOY_TO_DEV:
|
||||
requires:
|
||||
- UNIT_TESTS_PERSIST_WORKSPACE
|
||||
# E2E: script-tag
|
||||
- cypress/run:
|
||||
name: 'E2E: Script Tag'
|
||||
pre-steps:
|
||||
- run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v && yarn global
|
||||
add wait-on' # Use yarn latest
|
||||
yarn: true
|
||||
store_artifacts: false
|
||||
working_directory: platform/viewer
|
||||
build: npx cross-env QUICK_BUILD=true yarn run build:package
|
||||
start: yarn run test:e2e:serve
|
||||
wait-on: 'http://localhost:3000'
|
||||
cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
|
||||
no-workspace: true # Don't persist workspace
|
||||
post-steps:
|
||||
- store_artifacts:
|
||||
path: platform/viewer/cypress/screenshots
|
||||
- store_test_results:
|
||||
path: cypress/results
|
||||
- BUILD
|
||||
- PROMOTE_TO_STAGING:
|
||||
type: approval
|
||||
requires:
|
||||
- UNIT_TESTS_PERSIST_WORKSPACE
|
||||
# Update NPM
|
||||
- DEPLOY_TO_DEV
|
||||
- DEPLOY_TO_STAGING:
|
||||
requires:
|
||||
- PROMOTE_TO_STAGING
|
||||
- PROMOTE_TO_PRODUCTION:
|
||||
type: approval
|
||||
requires:
|
||||
- DEPLOY_TO_STAGING
|
||||
- DEPLOY_TO_PRODUCTION:
|
||||
requires:
|
||||
- PROMOTE_TO_PRODUCTION
|
||||
###
|
||||
# Unit and E2E tests have already run for PR_CHECKS
|
||||
# Re-running should not gain us any confidence here
|
||||
###
|
||||
RELEASE:
|
||||
jobs:
|
||||
- NPM_PUBLISH:
|
||||
requires:
|
||||
- 'E2E: Script Tag'
|
||||
- 'E2E: PWA'
|
||||
# Update docs.ohif.org
|
||||
filters:
|
||||
branches:
|
||||
only: master
|
||||
- DOCS_PUBLISH:
|
||||
requires:
|
||||
- 'E2E: Script Tag'
|
||||
- 'E2E: PWA'
|
||||
- VIEWER_DEMO_BUILD:
|
||||
requires:
|
||||
- 'E2E: Script Tag'
|
||||
- 'E2E: PWA'
|
||||
# Update viewer.ohif.org
|
||||
- VIEWER_DEMO_PUBLISH:
|
||||
requires:
|
||||
- VIEWER_DEMO_BUILD
|
||||
# Update hub.docker.org
|
||||
- DOCKER_PUBLISH:
|
||||
filters:
|
||||
branches:
|
||||
only: master
|
||||
- DOCKER_MASTER_PUBLISH:
|
||||
requires:
|
||||
- NPM_PUBLISH
|
||||
#
|
||||
#
|
||||
# Potentially use to E2E test STAGING environment
|
||||
# before publishing to production
|
||||
# - cypress/run:
|
||||
# name: 'E2E: PWA'
|
||||
# executor: deploy-to-prod-executor
|
||||
# browser: chrome
|
||||
# working_directory: platform/viewer
|
||||
# cache-key: 'yarn-packages-{{ checksum "yarn.lock" }}'
|
||||
# yarn: true
|
||||
# record: false
|
||||
# no-workspace: true
|
||||
# store_artifacts: true
|
||||
# post-steps:
|
||||
# - store_artifacts:
|
||||
# path: platform/viewer/cypress/screenshots
|
||||
# - store_test_results:
|
||||
# path: cypress/results
|
||||
@@ -0,0 +1 @@
|
||||
PERCY_TOKEN=<your token here>
|
||||
@@ -16,6 +16,7 @@
|
||||
},
|
||||
"globals": {
|
||||
"cy": true,
|
||||
"before": true,
|
||||
"context": true,
|
||||
"Cypress": true,
|
||||
"assert": true
|
||||
|
||||
@@ -0,0 +1,29 @@
|
||||
### Request Checklist
|
||||
|
||||
- [] Brief description of changes
|
||||
- [] Links to any relevant issues
|
||||
- [] Required status checks are passing
|
||||
- [] `@mention` a maintainer to request a review
|
||||
|
||||
#### Special
|
||||
|
||||
> If this PR is not on a branch for this repo, it is "untrusted" and does not
|
||||
> have access to env vars. Reviewers can kick off a trusted docker deploy by:
|
||||
>
|
||||
> 1. Verifying there are no malicious changes to CI build
|
||||
> 2. Using the [git-push-fork-to-upstream-branch][script] script
|
||||
> 3. Executing the manual approval step in the CI workflow
|
||||
|
||||
- [] Request docker publish of PR
|
||||
|
||||
_Want to improve this process? Consider PR'ing the ability for reviewers to add
|
||||
a label to trigger this process._
|
||||
|
||||
<!--
|
||||
Links
|
||||
-->
|
||||
|
||||
<!-- prettier-ignore-start -->
|
||||
[blog]: https://circleci.com/blog/triggering-trusted-ci-jobs-on-untrusted-forks/
|
||||
[script]: https://github.com/jklukas/git-push-fork-to-upstream-branch
|
||||
<!-- prettier-ignore-end -->
|
||||
@@ -21,6 +21,7 @@ npm-debug.log
|
||||
package-lock.json
|
||||
yarn-error.log
|
||||
.DS_Store
|
||||
.env
|
||||
|
||||
# Common Example Data Directories
|
||||
sampledata/
|
||||
|
||||
@@ -0,0 +1,5 @@
|
||||
# Specific to our non-deploy-preview deploys
|
||||
# Confgure redirects using netlify.toml
|
||||
|
||||
# PWA Redirect
|
||||
/* /index.html 200
|
||||
@@ -0,0 +1,15 @@
|
||||
{
|
||||
"name": "root",
|
||||
"private": true,
|
||||
"engines": {
|
||||
"node": ">=10",
|
||||
"npm": ">=6",
|
||||
"yarn": ">=1.16.0"
|
||||
},
|
||||
"scripts": {
|
||||
"deploy": "netlify deploy --prod --dir ./../platform/viewer/dist"
|
||||
},
|
||||
"devDependencies": {
|
||||
"netlify-cli": "^2.21.0"
|
||||
}
|
||||
}
|
||||
Vendored
+9
-7
@@ -1,10 +1,8 @@
|
||||
{
|
||||
"editor.rulers": [80, 120],
|
||||
|
||||
// ===
|
||||
// Spacing
|
||||
// ===
|
||||
|
||||
"editor.insertSpaces": true,
|
||||
"editor.tabSize": 2,
|
||||
"editor.trimAutoWhitespace": true,
|
||||
@@ -12,19 +10,23 @@
|
||||
"files.eol": "\n",
|
||||
"files.insertFinalNewline": true,
|
||||
"files.trimFinalNewlines": true,
|
||||
|
||||
// ===
|
||||
// Event Triggers
|
||||
// ===
|
||||
|
||||
"editor.formatOnSave": true,
|
||||
"eslint.autoFixOnSave": true,
|
||||
"eslint.run": "onSave",
|
||||
"eslint.validate": [
|
||||
{ "language": "javascript", "autoFix": true },
|
||||
{ "language": "javascriptreact", "autoFix": true }
|
||||
{
|
||||
"language": "javascript",
|
||||
"autoFix": true
|
||||
},
|
||||
{
|
||||
"language": "javascriptreact",
|
||||
"autoFix": true
|
||||
}
|
||||
],
|
||||
"prettier.disableLanguages": [],
|
||||
"prettier.disableLanguages": ["html"],
|
||||
"prettier.endOfLine": "lf",
|
||||
"workbench.colorCustomizations": {}
|
||||
}
|
||||
@@ -1,5 +1,9 @@
|
||||
// ~~ ENV
|
||||
const dotenv = require('dotenv');
|
||||
//
|
||||
const path = require('path');
|
||||
const webpack = require('webpack');
|
||||
const PACKAGE = require('../platform/viewer/package.json');
|
||||
// ~~ RULES
|
||||
const loadShadersRule = require('./rules/loadShaders.js');
|
||||
const loadWebWorkersRule = require('./rules/loadWebWorkers.js');
|
||||
@@ -9,6 +13,10 @@ const TerserJSPlugin = require('terser-webpack-plugin');
|
||||
// ~~ ENV VARS
|
||||
const NODE_ENV = process.env.NODE_ENV;
|
||||
const QUICK_BUILD = process.env.QUICK_BUILD;
|
||||
const BUILD_NUM = process.env.CIRCLE_BUILD_NUM || '0';
|
||||
|
||||
//
|
||||
dotenv.config();
|
||||
|
||||
module.exports = (env, argv, { SRC_DIR, DIST_DIR }) => {
|
||||
if (!process.env.NODE_ENV) {
|
||||
@@ -68,6 +76,8 @@ module.exports = (env, argv, { SRC_DIR, DIST_DIR }) => {
|
||||
'process.env.DEBUG': JSON.stringify(process.env.DEBUG),
|
||||
'process.env.APP_CONFIG': JSON.stringify(process.env.APP_CONFIG || ''),
|
||||
'process.env.PUBLIC_URL': JSON.stringify(process.env.PUBLIC_URL || '/'),
|
||||
'process.env.VERSION_NUMBER': JSON.stringify(PACKAGE.version || ''),
|
||||
'process.env.BUILD_NUM': JSON.stringify(BUILD_NUM),
|
||||
}),
|
||||
],
|
||||
// Fix: https://github.com/webpack-contrib/css-loader/issues/447#issuecomment-285598881
|
||||
|
||||
@@ -44,6 +44,7 @@ RUN yarn config set workspaces-experimental true
|
||||
RUN yarn install
|
||||
|
||||
ENV PATH /usr/src/app/node_modules/.bin:$PATH
|
||||
ENV QUICK_BUILD true
|
||||
# ENV GENERATE_SOURCEMAP=false
|
||||
# ENV REACT_APP_CONFIG=config/default.js
|
||||
|
||||
|
||||
@@ -22,10 +22,12 @@
|
||||
[![NPM downloads][npm-downloads-image]][npm-url]
|
||||
[![Pulls][docker-pulls-img]][docker-image-url]
|
||||
[![MIT License][license-image]][license-url]
|
||||
[](https://app.fossa.io/projects/git%2Bgithub.com%2FOHIF%2FViewers?ref=badge_shield)
|
||||
|
||||
[![Netlify Status][netlify-image]][netlify-url]
|
||||
[![CircleCI][circleci-image]][circleci-url]
|
||||
[![codecov][codecov-image]][codecov-url]
|
||||
[![This project is using Percy.io for visual regression testing.][percy-image]](percy-url)
|
||||
[](#contributors)
|
||||
<!-- prettier-ignore-end -->
|
||||
|
||||
@@ -288,6 +290,8 @@ MIT © [OHIF](https://github.com/OHIF)
|
||||
[docker-image-url]: https://hub.docker.com/r/ohif/viewer
|
||||
[license-image]: https://img.shields.io/badge/license-MIT-blue.svg?style=flat-square
|
||||
[license-url]: LICENSE
|
||||
[percy-image]: https://percy.io/static/images/percy-badge.svg
|
||||
[percy-url]: https://percy.io/Open-Health-Imaging-Foundation/OHIF-Viewer
|
||||
<!-- Links -->
|
||||
[monorepo]: https://en.wikipedia.org/wiki/Monorepo
|
||||
[how-to-fork]: https://help.github.com/en/articles/fork-a-repo
|
||||
@@ -321,3 +325,6 @@ MIT © [OHIF](https://github.com/OHIF)
|
||||
[extension-vtk]: extensions/vtk/README.md
|
||||
[vtk-npm]: https://www.npmjs.com/package/@ohif/extension-vtk
|
||||
<!-- prettier-ignore-end -->
|
||||
|
||||
|
||||
[](https://app.fossa.io/projects/git%2Bgithub.com%2FOHIF%2FViewers?ref=badge_large)
|
||||
@@ -47,5 +47,6 @@
|
||||
|
||||
- [FAQ](frequently-asked-questions.md)
|
||||
- [Contributing](contributing/index.md)
|
||||
- [Continuous Integration](continous-integration.md)
|
||||
- [Browser Support](browser-support.md)
|
||||
- [Help](help.md)
|
||||
Binary file not shown.
|
After Width: | Height: | Size: 7.8 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 5.7 KiB |
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|
After Width: | Height: | Size: 4.7 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 6.2 KiB |
@@ -0,0 +1,109 @@
|
||||
# Continous Integration (CI)
|
||||
|
||||
This repository uses `CircleCI` and `Netlify` for continous integration.
|
||||
|
||||
## Deploy Previews
|
||||
|
||||
[Netlify Deploy previews][deploy-previews] are generated for every pull request.
|
||||
They allow pull request authors and reviewers to "Preview" the OHIF Viewer as if
|
||||
the changes had been merged.
|
||||
|
||||
Deploy previews can be configured by modifying the `netlify.toml` file in the
|
||||
root of the repository. Some additional scripts/assets for netlify are included
|
||||
in the root `.netlify` directory.
|
||||
|
||||
## Workflows
|
||||
|
||||
[CircleCI Workflows][circleci-workflows] are a set of rules for defining a
|
||||
collection of jobs and their run order. They are self-documenting and their
|
||||
configuration can be found in our CircleCI configuration file:
|
||||
`.circleci/config.yml`.
|
||||
|
||||
### Workflow: PR_CHECKS
|
||||
|
||||
The PR_CHECKS workflow (Pull Request Checks) runs our automated unit and
|
||||
end-to-end tests for every code check-in. These tests must all pass before code
|
||||
can be merged to our `master` branch.
|
||||
|
||||
<div style="text-align: center;">
|
||||
<a href="/assets/img/WORKFLOW_PR_CHECKS.png">
|
||||
<img src="/assets/img/WORKFLOW_PR_CHECKS.png" alt="workflow diagram" style="margin: 0 auto; max-width: 500px;" />
|
||||
</a>
|
||||
<div><i>Workflow diagram for PR_CHECKS</i></div>
|
||||
</div>
|
||||
|
||||
### Workflow: PR_OPTIONAL_DOCKER_PUBLISH
|
||||
|
||||
The PR_OPTIONAL_DOCKER_PUBLISH workflow allows for "manual approval" to publish
|
||||
the pull request as a tagged docker image. This is helpful when changes need to
|
||||
be tested with the Google Adapter before merging to `master`.
|
||||
|
||||
<div style="text-align: center;">
|
||||
<a href="/assets/img/WORKFLOW_PR_OPTIONAL_DOCKER_PUBLISH.png">
|
||||
<img src="/assets/img/WORKFLOW_PR_OPTIONAL_DOCKER_PUBLISH.png" alt="workflow diagram" style="margin: 0 auto; max-width: 500px;" />
|
||||
</a>
|
||||
<div><i>Workflow diagram for PR_WORKFLOW_PR_OPTIONAL_DOCKER_PUBLISH</i></div>
|
||||
</div>
|
||||
|
||||
> NOTE: This workflow will fail unless it's for a branch on our `upstream`
|
||||
> repository. If you need this functionality, but the branch is from a fork,
|
||||
> merge the changes to a short-lived `feature/` branch on `upstream`
|
||||
|
||||
### Workflow: DEPLOY
|
||||
|
||||
The DEPLOY workflow deploys the OHIF Viewer when changes are merged to master.
|
||||
It uses the Netlify CLI to deploy assets created as part of the repository's PWA
|
||||
Build process (`yarn run build`). The workflow allows for "Manual Approval" to
|
||||
promote the build to `STAGING` and `PRODUCTION` environments.
|
||||
|
||||
<div style="text-align: center;">
|
||||
<a href="/assets/img/WORKFLOW_DEPLOY.png">
|
||||
<img src="/assets/img/WORKFLOW_DEPLOY.png" alt="workflow diagram" style="margin: 0 auto; max-width: 500px;" />
|
||||
</a>
|
||||
<div><i>Workflow diagram for WORKFLOW_DEPLOY</i></div>
|
||||
</div>
|
||||
|
||||
| Environment | Description | URL |
|
||||
| ----------- | ---------------------------------------------------------------------------------- | --------------------------------------------- |
|
||||
| Development | Always reflects latest changes on `master` branch. | [Netlify][netlify-dev] / [OHIF][ohif-dev] |
|
||||
| Staging | For manual testing before promotion to prod. Keeps development workflow unblocked. | [Netlify][netlify-stage] / [OHIF][ohif-stage] |
|
||||
| Production | Stable, tested, updated less frequently. | [Netlify][netlify-prod] / [OHIF][ohif-prod] |
|
||||
|
||||
### Workflow: RELEASE
|
||||
|
||||
The RELEASE workflow publishes our `npm` packages, updated documentation, and
|
||||
`docker` image when changes are merged to master. `Lerna` and "Semantic Commit
|
||||
Syntax" are used to independently version and publish the many packages in our
|
||||
monorepository. If a new version is cut/released, a Docker image is created.
|
||||
Documentation is generated with `gitbook` and pushed to our `gh-pages` branch.
|
||||
GitHub hosts the `gh-pages` branch with GitHub Pages.
|
||||
|
||||
- Platform Packages: https://github.com/ohif/viewers/#platform
|
||||
- Extension Packages: https://github.com/ohif/viewers/#extensions
|
||||
- Documentation: https://docs.ohif.org/
|
||||
|
||||
<div style="text-align: center;">
|
||||
<a href="/assets/img/WORKFLOW_RELEASE.png">
|
||||
<img src="/assets/img/WORKFLOW_RELEASE.png" alt="workflow diagram" style="margin: 0 auto; max-width: 500px;" />
|
||||
</a>
|
||||
<div><i>Workflow diagram for WORKFLOW_RELEASE</i></div>
|
||||
</div>
|
||||
|
||||
### HOTFIX
|
||||
|
||||
_Not yet implemented_
|
||||
|
||||
<!--
|
||||
LINKS
|
||||
-->
|
||||
|
||||
<!-- prettier-ignore-start -->
|
||||
[deploy-previews]: https://www.netlify.com/blog/2016/07/20/introducing-deploy-previews-in-netlify/
|
||||
[circleci-workflows]: https://circleci.com/docs/2.0/workflows/
|
||||
[netlify-dev]: https://ohif-dev.netlify.com
|
||||
[netlify-stage]: https://ohif-stage.netlify.com
|
||||
[netlify-prod]: https://ohif-prod.netlify.com
|
||||
[ohif-dev]: https://viewer-dev.ohif.org
|
||||
[ohif-stage]: https://viewer-stage.ohif.org
|
||||
[ohif-prod]: https://viewer-prod.ohif.org
|
||||
<!-- prettier-ignore-end -->
|
||||
@@ -48,7 +48,7 @@ If everything worked as expected, you should have a new `dist/` directory in the
|
||||
project's folder. It should roughly resemble the following:
|
||||
|
||||
```bash
|
||||
dist/
|
||||
<root>platform/viewer/dist/
|
||||
├── app-config.js
|
||||
├── app.bundle.js
|
||||
├── app.css
|
||||
|
||||
@@ -11,7 +11,10 @@ export default {
|
||||
* LIFECYCLE HOOKS
|
||||
*/
|
||||
|
||||
preRegistration(extensionConfiguration) {},
|
||||
preRegistration({
|
||||
servicesManager,
|
||||
configuration: extensionConfiguration,
|
||||
}) {},
|
||||
|
||||
/**
|
||||
* MODULE GETTERS
|
||||
|
||||
@@ -3,6 +3,47 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.5.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@1.5.0...@ohif/extension-cornerstone@1.5.1) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-cornerstone
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.5.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@1.4.1...@ohif/extension-cornerstone@1.5.0) (2019-11-13)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* expose UiNotifications service ([#1172](https://github.com/OHIF/Viewers/issues/1172)) ([5c04e34](https://github.com/OHIF/Viewers/commit/5c04e34c8fb2394ab7acd9eb4f2ab12afeb2f255))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@1.4.0...@ohif/extension-cornerstone@1.4.1) (2019-11-08)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Add a fallback metadata provider which pulls metadata from WADO-… ([#1158](https://github.com/OHIF/Viewers/issues/1158)) ([31b1adf](https://github.com/OHIF/Viewers/commit/31b1adfa5993d6c8e3e9c8b03fa9856f2621b037))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@1.3.1...@ohif/extension-cornerstone@1.4.0) (2019-10-26)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Snapshot Download Tool ([#840](https://github.com/OHIF/Viewers/issues/840)) ([450e098](https://github.com/OHIF/Viewers/commit/450e0981a5ba054fcfcb85eeaeb18371af9088f8))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@1.3.0...@ohif/extension-cornerstone@1.3.1) (2019-10-09)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-cornerstone",
|
||||
"version": "1.3.1",
|
||||
"version": "1.5.1",
|
||||
"description": "OHIF extension for Cornerstone",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -48,6 +48,7 @@
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"classnames": "^2.2.6",
|
||||
"lodash.throttle": "^4.1.1",
|
||||
"query-string": "^6.8.3",
|
||||
"react-cornerstone-viewport": "2.x.x"
|
||||
}
|
||||
}
|
||||
@@ -24,8 +24,8 @@ export default {
|
||||
* @param {object} [configuration={}]
|
||||
* @param {object|array} [configuration.csToolsConfig] - Passed directly to `initCornerstoneTools`
|
||||
*/
|
||||
preRegistration(configuration = {}) {
|
||||
init(configuration);
|
||||
preRegistration({ servicesManager, configuration = {} }) {
|
||||
init({ servicesManager, configuration });
|
||||
},
|
||||
getViewportModule() {
|
||||
return OHIFCornerstoneViewport;
|
||||
|
||||
@@ -2,13 +2,33 @@ import OHIF from '@ohif/core';
|
||||
import cornerstone from 'cornerstone-core';
|
||||
import csTools from 'cornerstone-tools';
|
||||
import initCornerstoneTools from './initCornerstoneTools.js';
|
||||
import queryString from 'query-string';
|
||||
|
||||
function fallbackMetaDataProvider(type, imageId) {
|
||||
if (!imageId.includes('wado?requestType=WADO')) {
|
||||
return;
|
||||
}
|
||||
|
||||
// If you call for an WADO-URI imageId and get no
|
||||
// metadata, try reformatting to WADO-RS imageId
|
||||
const qs = queryString.parse(imageId);
|
||||
const wadoRoot = window.store.getState().servers.servers[0].wadoRoot;
|
||||
const wadoRsImageId = `wadors:${wadoRoot}/studies/${qs.studyUID}/series/${
|
||||
qs.seriesUID
|
||||
}/instances/${qs.objectUID}/frames/${qs.frame || 1}`;
|
||||
|
||||
return cornerstone.metaData.get(type, wadoRsImageId);
|
||||
}
|
||||
|
||||
// Add this fallback provider with a low priority so it is handled last
|
||||
cornerstone.metaData.addProvider(fallbackMetaDataProvider, -1);
|
||||
|
||||
/**
|
||||
*
|
||||
* @param {object} configuration
|
||||
* @param {Object|Array} configuration.csToolsConfig
|
||||
*/
|
||||
export default function init(configuration = {}) {
|
||||
export default function init({ servicesManager, configuration = {} }) {
|
||||
const { csToolsConfig } = configuration;
|
||||
const { StackManager } = OHIF.utils;
|
||||
const metadataProvider = new OHIF.cornerstone.MetadataProvider();
|
||||
@@ -78,6 +98,7 @@ export default function init(configuration = {}) {
|
||||
];
|
||||
|
||||
tools.forEach(tool => csTools.addTool(tool));
|
||||
|
||||
csTools.setToolActive('Pan', { mouseButtonMask: 4 });
|
||||
csTools.setToolActive('Zoom', { mouseButtonMask: 2 });
|
||||
csTools.setToolActive('Wwwc', { mouseButtonMask: 1 });
|
||||
|
||||
@@ -213,6 +213,16 @@ const definitions = [
|
||||
commandName: 'setToolActive',
|
||||
commandOptions: { toolName: 'Eraser' },
|
||||
},
|
||||
{
|
||||
id: 'Download',
|
||||
label: 'Download',
|
||||
icon: 'create-screen-capture',
|
||||
//
|
||||
type: TOOLBAR_BUTTON_TYPES.BUILT_IN,
|
||||
options: {
|
||||
behavior: 'DOWNLOAD_SCREEN_SHOT',
|
||||
},
|
||||
},
|
||||
],
|
||||
},
|
||||
];
|
||||
|
||||
@@ -3,6 +3,17 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.0.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.0.0...@ohif/extension-dicom-html@1.0.1) (2019-10-29)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Set SR viewport as active by interaction ([#1118](https://github.com/OHIF/Viewers/issues/1118)) ([5b33417](https://github.com/OHIF/Viewers/commit/5b334175c370afb930b4b6dbd307ddece8f850e3))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.0.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.50.8...@ohif/extension-dicom-html@1.0.0) (2019-09-27)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-dicom-html",
|
||||
"version": "1.0.0",
|
||||
"version": "1.0.1",
|
||||
"description": "OHIF extension for rendering structured reports to HTML",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -0,0 +1,33 @@
|
||||
import OHIF from '@ohif/core';
|
||||
import { connect } from 'react-redux';
|
||||
import DicomHtmlViewport from './DicomHtmlViewport';
|
||||
|
||||
const { setViewportActive } = OHIF.redux.actions;
|
||||
|
||||
const mapStateToProps = (state, ownProps) => {
|
||||
const { viewportIndex, byteArray } = ownProps;
|
||||
const activeViewportIndex = state.viewports;
|
||||
|
||||
return {
|
||||
viewportIndex,
|
||||
activeViewportIndex,
|
||||
byteArray,
|
||||
};
|
||||
};
|
||||
|
||||
const mapDispatchToProps = (dispatch, ownProps) => {
|
||||
const { viewportIndex } = ownProps;
|
||||
|
||||
return {
|
||||
setViewportActive: () => {
|
||||
dispatch(setViewportActive(viewportIndex));
|
||||
},
|
||||
};
|
||||
};
|
||||
|
||||
const ConnectedDicomHtmlViewport = connect(
|
||||
mapStateToProps,
|
||||
mapDispatchToProps
|
||||
)(DicomHtmlViewport);
|
||||
|
||||
export default ConnectedDicomHtmlViewport;
|
||||
@@ -1,6 +1,8 @@
|
||||
import React, { Component } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import * as dcmjs from 'dcmjs';
|
||||
import TypedArrayProp from './TypedArrayProp';
|
||||
|
||||
import './DicomHtmlViewport.css';
|
||||
|
||||
function getRelationshipString(data) {
|
||||
@@ -30,7 +32,7 @@ function getValueString(data) {
|
||||
const {
|
||||
CodeMeaning,
|
||||
CodeValue,
|
||||
CodingSchemeDesignator
|
||||
CodingSchemeDesignator,
|
||||
} = data.ConceptNameCodeSequence;
|
||||
|
||||
return `${CodeMeaning} (${CodeValue}, ${CodingSchemeDesignator})`;
|
||||
@@ -75,7 +77,7 @@ function constructContentSequence(data, header) {
|
||||
}
|
||||
|
||||
const result = {
|
||||
items
|
||||
items,
|
||||
};
|
||||
|
||||
if (header) {
|
||||
@@ -106,9 +108,7 @@ const { DicomMetaDictionary, DicomMessage } = dcmjs.data;
|
||||
function getMainData(data) {
|
||||
const root = [];
|
||||
|
||||
const patientValue = `${data.PatientName} (${data.PatientSex}, #${
|
||||
data.PatientID
|
||||
})`;
|
||||
const patientValue = `${data.PatientName} (${data.PatientSex}, #${data.PatientID})`;
|
||||
root.push(getMainDataItem('Patient', patientValue));
|
||||
|
||||
const studyValue = data.StudyDescription;
|
||||
@@ -117,15 +117,13 @@ function getMainData(data) {
|
||||
const seriesValue = `${data.SeriesDescription} (#${data.SeriesNumber})`;
|
||||
root.push(getMainDataItem('Series', seriesValue));
|
||||
|
||||
const manufacturerValue = `${data.Manufacturer} (${
|
||||
data.ManufacturerModelName
|
||||
}, #${data.DeviceSerialNumber})`;
|
||||
const manufacturerValue = `${data.Manufacturer} (${data.ManufacturerModelName}, #${data.DeviceSerialNumber})`;
|
||||
|
||||
root.push(getMainDataItem('Manufacturer', manufacturerValue));
|
||||
|
||||
const mainDataObjects = {
|
||||
CompletionFlag: 'Completion flag',
|
||||
VerificationFlag: 'Verification flag'
|
||||
VerificationFlag: 'Verification flag',
|
||||
};
|
||||
|
||||
Object.keys(mainDataObjects).forEach(key => {
|
||||
@@ -154,7 +152,7 @@ const getContentSequence = (data, level = 1) => {
|
||||
const {
|
||||
CodeMeaning,
|
||||
CodeValue,
|
||||
CodingSchemeDesignator
|
||||
CodingSchemeDesignator,
|
||||
} = data.ConceptNameCodeSequence;
|
||||
|
||||
header = `${CodeMeaning} (${CodeValue} - ${CodingSchemeDesignator})`;
|
||||
@@ -198,11 +196,14 @@ function getMainDataItem(key, value) {
|
||||
class DicomHtmlViewport extends Component {
|
||||
state = {
|
||||
content: null,
|
||||
error: null
|
||||
error: null,
|
||||
};
|
||||
|
||||
static propTypes = {
|
||||
byteArray: TypedArrayProp.uint8
|
||||
byteArray: TypedArrayProp.uint8,
|
||||
setViewportActive: PropTypes.func.isRequired,
|
||||
viewportIndex: PropTypes.number.isRequired,
|
||||
activeViewportIndex: PropTypes.number.isRequired,
|
||||
};
|
||||
|
||||
componentDidMount() {
|
||||
@@ -225,15 +226,34 @@ class DicomHtmlViewport extends Component {
|
||||
);
|
||||
|
||||
this.setState({
|
||||
content
|
||||
content,
|
||||
});
|
||||
}
|
||||
|
||||
setViewportActiveHandler = () => {
|
||||
const {
|
||||
setViewportActive,
|
||||
viewportIndex,
|
||||
activeViewportIndex,
|
||||
} = this.props;
|
||||
|
||||
if (viewportIndex !== activeViewportIndex) {
|
||||
setViewportActive();
|
||||
}
|
||||
};
|
||||
|
||||
render() {
|
||||
const { content, error } = this.state;
|
||||
|
||||
return (
|
||||
<div className={'DicomHtmlViewport'}>
|
||||
{this.state.content}
|
||||
{this.state.error && <h2>{JSON.stringify(this.state.error)}</h2>}
|
||||
<div
|
||||
data-cy="dicom-html-viewport"
|
||||
className="DicomHtmlViewport"
|
||||
onClick={this.setViewportActiveHandler}
|
||||
onScroll={this.setViewportActiveHandler}
|
||||
>
|
||||
{content}
|
||||
{error && <h2>{JSON.stringify(error)}</h2>}
|
||||
</div>
|
||||
);
|
||||
}
|
||||
|
||||
@@ -1,7 +1,8 @@
|
||||
import React, { Component } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import DicomHtmlViewport from './DicomHtmlViewport';
|
||||
import OHIF from '@ohif/core';
|
||||
import ConnectedDicomHtmlViewport from './ConnectedDicomHtmlViewport';
|
||||
|
||||
const { DicomLoaderService } = OHIF.utils;
|
||||
|
||||
class OHIFDicomHtmlViewport extends Component {
|
||||
@@ -9,6 +10,7 @@ class OHIFDicomHtmlViewport extends Component {
|
||||
studies: PropTypes.object,
|
||||
displaySet: PropTypes.object,
|
||||
viewportIndex: PropTypes.number,
|
||||
viewportData: PropTypes.object,
|
||||
};
|
||||
|
||||
state = {
|
||||
@@ -40,7 +42,10 @@ class OHIFDicomHtmlViewport extends Component {
|
||||
return (
|
||||
<>
|
||||
{this.state.byteArray && (
|
||||
<DicomHtmlViewport byteArray={this.state.byteArray} />
|
||||
<ConnectedDicomHtmlViewport
|
||||
byteArray={this.state.byteArray}
|
||||
viewportIndex={this.props.viewportIndex}
|
||||
/>
|
||||
)}
|
||||
{this.state.error && <h2>{JSON.stringify(this.state.error)}</h2>}
|
||||
</>
|
||||
|
||||
@@ -3,6 +3,308 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.53.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.8...@ohif/extension-vtk@0.53.9) (2019-11-18)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.8](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.7...@ohif/extension-vtk@0.53.8) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.6...@ohif/extension-vtk@0.53.7) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.5...@ohif/extension-vtk@0.53.6) (2019-11-14)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.4...@ohif/extension-vtk@0.53.5) (2019-11-13)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.3...@ohif/extension-vtk@0.53.4) (2019-11-12)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.2...@ohif/extension-vtk@0.53.3) (2019-11-11)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* mpr2d vtkjs viewport does not render if range is set to `NaN` values ([#1157](https://github.com/OHIF/Viewers/issues/1157)) ([84a0972](https://github.com/OHIF/Viewers/commit/84a097212babc0f98198b9ced1def9743973a5a8))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.1...@ohif/extension-vtk@0.53.2) (2019-11-08)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.53.0...@ohif/extension-vtk@0.53.1) (2019-11-08)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.53.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.32...@ohif/extension-vtk@0.53.0) (2019-11-06)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* modal provider ([#1151](https://github.com/OHIF/Viewers/issues/1151)) ([75d88bc](https://github.com/OHIF/Viewers/commit/75d88bc454710d2dcdbc7d68c4d9df041159c840)), closes [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1146](https://github.com/OHIF/Viewers/issues/1146) [#1142](https://github.com/OHIF/Viewers/issues/1142) [#1143](https://github.com/OHIF/Viewers/issues/1143) [#1110](https://github.com/OHIF/Viewers/issues/1110) [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1119](https://github.com/OHIF/Viewers/issues/1119)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.32](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.31...@ohif/extension-vtk@0.52.32) (2019-11-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.31](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.30...@ohif/extension-vtk@0.52.31) (2019-11-05)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
## [0.52.30](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.29...@ohif/extension-vtk@0.52.30) (2019-11-04)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.29](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.28...@ohif/extension-vtk@0.52.29) (2019-11-04)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Upgrade react-vtkjs-viewport to fix volume orientation ([#1143](https://github.com/OHIF/Viewers/issues/1143)) ([1d86b1a](https://github.com/OHIF/Viewers/commit/1d86b1a102fc422053cff103de8c12ca6f437354))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.28](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.27...@ohif/extension-vtk@0.52.28) (2019-11-04)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.27](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.26...@ohif/extension-vtk@0.52.27) (2019-10-31)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.26](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.25...@ohif/extension-vtk@0.52.26) (2019-10-30)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.25](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.24...@ohif/extension-vtk@0.52.25) (2019-10-29)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.24](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.23...@ohif/extension-vtk@0.52.24) (2019-10-29)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.23](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.22...@ohif/extension-vtk@0.52.23) (2019-10-28)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.22](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.21...@ohif/extension-vtk@0.52.22) (2019-10-28)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* MIP styling ([#1109](https://github.com/OHIF/Viewers/issues/1109)) ([0d21cc6](https://github.com/OHIF/Viewers/commit/0d21cc6ad0c47706b9e62e05fe2a0f1d86339760))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.21](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.20...@ohif/extension-vtk@0.52.21) (2019-10-26)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.20](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.19...@ohif/extension-vtk@0.52.20) (2019-10-26)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.19](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.18...@ohif/extension-vtk@0.52.19) (2019-10-25)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.18](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.17...@ohif/extension-vtk@0.52.18) (2019-10-25)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Orthographic MPR fix ([#1092](https://github.com/OHIF/Viewers/issues/1092)) ([460e375](https://github.com/OHIF/Viewers/commit/460e375f0aa75d35f7a46b4d48e6cc706019956d))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.17](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.16...@ohif/extension-vtk@0.52.17) (2019-10-25)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Fix crosshairs location when using MIP ([#1080](https://github.com/OHIF/Viewers/issues/1080)) ([b451ce4](https://github.com/OHIF/Viewers/commit/b451ce440796f13b0891739d2130e8ee71993d3d))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.16](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.15...@ohif/extension-vtk@0.52.16) (2019-10-23)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Switch to orhtographic view for 2D MPR ([#1074](https://github.com/OHIF/Viewers/issues/1074)) ([13d337a](https://github.com/OHIF/Viewers/commit/13d337aaabb8dadf6366c6262c5e47e7781edd08))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.15](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.14...@ohif/extension-vtk@0.52.15) (2019-10-23)
|
||||
|
||||
|
||||
### Performance Improvements
|
||||
|
||||
* ⚡️ Throttle UI refresh of synced WL value in vtk port ([#1070](https://github.com/OHIF/Viewers/issues/1070)) ([9d08e81](https://github.com/OHIF/Viewers/commit/9d08e81aa5def63a5e34f464aae099f7c29f0ac5))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.14](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.13...@ohif/extension-vtk@0.52.14) (2019-10-22)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.13](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.12...@ohif/extension-vtk@0.52.13) (2019-10-18)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.12](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.11...@ohif/extension-vtk@0.52.12) (2019-10-18)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.11](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.10...@ohif/extension-vtk@0.52.11) (2019-10-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.9...@ohif/extension-vtk@0.52.10) (2019-10-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.8...@ohif/extension-vtk@0.52.9) (2019-10-14)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.8](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.7...@ohif/extension-vtk@0.52.8) (2019-10-14)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.6...@ohif/extension-vtk@0.52.7) (2019-10-11)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-vtk",
|
||||
"version": "0.52.7",
|
||||
"version": "0.53.9",
|
||||
"description": "OHIF extension for VTK.js",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -48,11 +48,12 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"react-vtkjs-viewport": "^0.1.6"
|
||||
"lodash.throttle": "^4.1.1",
|
||||
"react-vtkjs-viewport": "^0.3.9"
|
||||
},
|
||||
"devDependencies": {
|
||||
"@ohif/core": "^1.3.1",
|
||||
"@ohif/ui": "^0.53.4",
|
||||
"@ohif/core": "^1.10.0",
|
||||
"@ohif/ui": "^0.62.4",
|
||||
"cornerstone-tools": "^4.0.9",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"dcmjs": "^0.6.1",
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
import OHIF from "@ohif/core";
|
||||
import { View2D } from "react-vtkjs-viewport";
|
||||
import { connect } from "react-redux";
|
||||
import OHIF from '@ohif/core';
|
||||
import { View2D } from 'react-vtkjs-viewport';
|
||||
import { connect } from 'react-redux';
|
||||
|
||||
const { setViewportActive, setViewportSpecificData } = OHIF.redux.actions;
|
||||
|
||||
@@ -24,7 +24,7 @@ const mapStateToProps = (state, ownProps) => {
|
||||
// Hopefully this doesn't break anything under the hood for this one
|
||||
// activeTool: activeButton && activeButton.command,
|
||||
...dataFromStore,
|
||||
enableStackPrefetch: isActive
|
||||
enableStackPrefetch: isActive,
|
||||
};
|
||||
};
|
||||
|
||||
@@ -38,7 +38,7 @@ const mapDispatchToProps = (dispatch, ownProps) => {
|
||||
|
||||
setViewportSpecificData: data => {
|
||||
dispatch(setViewportSpecificData(viewportIndex, data));
|
||||
}
|
||||
},
|
||||
};
|
||||
};
|
||||
|
||||
@@ -63,10 +63,10 @@ const mergeProps = (propsFromState, propsFromDispatch, ownProps) => {
|
||||
// Store the API details for later
|
||||
//setViewportSpecificData({ vtkApi: api });
|
||||
|
||||
if (afterCreation && typeof afterCreation === "function") {
|
||||
if (afterCreation && typeof afterCreation === 'function') {
|
||||
afterCreation(api);
|
||||
}
|
||||
}
|
||||
},
|
||||
};
|
||||
return props;
|
||||
};
|
||||
|
||||
@@ -3,15 +3,15 @@
|
||||
}
|
||||
|
||||
.loadingIndicator {
|
||||
background-color: rgba(0, 0, 0, 0.75);
|
||||
font-size: 18px;
|
||||
height: 100%;
|
||||
background-color: rgba(0, 0, 0, 0);
|
||||
font-size: 8px;
|
||||
height: 20%;
|
||||
overflow: hidden;
|
||||
position: absolute;
|
||||
top: 0;
|
||||
width: 100%;
|
||||
z-index: 1;
|
||||
|
||||
/* Necessary for click-through to cornerstone element below */
|
||||
/* Necessary for click-through to vtkjs element below */
|
||||
pointer-events: none;
|
||||
}
|
||||
@@ -1,7 +1,7 @@
|
||||
import './LoadingIndicator.css';
|
||||
|
||||
import React, { PureComponent } from 'react';
|
||||
|
||||
import { withTranslation } from 'react-i18next';
|
||||
import PropTypes from 'prop-types';
|
||||
|
||||
class LoadingIndicator extends PureComponent {
|
||||
@@ -35,7 +35,8 @@ class LoadingIndicator extends PureComponent {
|
||||
<div className="imageViewerLoadingIndicator loadingIndicator">
|
||||
<div className="indicatorContents">
|
||||
<p>
|
||||
Loading... <i className="fa fa-spin fa-circle-o-notch fa-fw" />{' '}
|
||||
{this.props.t('Reformatting')}...
|
||||
<i className="fa fa-spin fa-circle-o-notch fa-fw" />
|
||||
{percComplete}
|
||||
</p>
|
||||
</div>
|
||||
@@ -46,4 +47,4 @@ class LoadingIndicator extends PureComponent {
|
||||
}
|
||||
}
|
||||
|
||||
export default LoadingIndicator;
|
||||
export default withTranslation('Common')(LoadingIndicator);
|
||||
@@ -11,7 +11,6 @@ import vtkDataArray from 'vtk.js/Sources/Common/Core/DataArray';
|
||||
import vtkImageData from 'vtk.js/Sources/Common/DataModel/ImageData';
|
||||
import vtkVolume from 'vtk.js/Sources/Rendering/Core/Volume';
|
||||
import vtkVolumeMapper from 'vtk.js/Sources/Rendering/Core/VolumeMapper';
|
||||
import vtkViewportSubscriptionManager from './utils/vtkViewportSubscriptionManager.js';
|
||||
|
||||
const { StackManager } = OHIF.utils;
|
||||
|
||||
@@ -66,8 +65,16 @@ class OHIFVTKViewport extends Component {
|
||||
};
|
||||
|
||||
static propTypes = {
|
||||
studies: PropTypes.object,
|
||||
displaySet: PropTypes.object,
|
||||
viewportData: PropTypes.shape({
|
||||
studies: PropTypes.array,
|
||||
displaySet: PropTypes.shape({
|
||||
studyInstanceUid: PropTypes.string,
|
||||
displaySetInstanceUid: PropTypes.string,
|
||||
sopClassUids: PropTypes.arrayOf(PropTypes.string),
|
||||
sopInstanceUid: PropTypes.string,
|
||||
frameIndex: PropTypes.number,
|
||||
}),
|
||||
}),
|
||||
viewportIndex: PropTypes.number,
|
||||
children: PropTypes.node,
|
||||
};
|
||||
@@ -172,56 +179,64 @@ class OHIFVTKViewport extends Component {
|
||||
default:
|
||||
imageDataObject = getImageData(stack.imageIds, displaySetInstanceUid);
|
||||
|
||||
const loadImageDataPromise = loadImageData(imageDataObject);
|
||||
|
||||
return loadImageDataPromise.then(() => {
|
||||
return {
|
||||
data: imageDataObject.vtkImageData,
|
||||
};
|
||||
});
|
||||
return imageDataObject;
|
||||
}
|
||||
};
|
||||
|
||||
getOrCreateVolume(data, displaySetInstanceUid) {
|
||||
/**
|
||||
*
|
||||
*
|
||||
* @param {object} imageDataObject
|
||||
* @param {object} imageDataObject.vtkImageData
|
||||
* @param {object} imageDataObject.imageMetaData0
|
||||
* @param {number} [imageDataObject.imageMetaData0.windowWidth] - The volume's initial windowWidth
|
||||
* @param {number} [imageDataObject.imageMetaData0.windowCenter] - The volume's initial windowCenter
|
||||
* @param {string} imageDataObject.imageMetaData0.modality - CT, MR, PT, etc
|
||||
* @param {string} displaySetInstanceUid
|
||||
* @returns vtkVolumeActor
|
||||
* @memberof OHIFVTKViewport
|
||||
*/
|
||||
getOrCreateVolume(imageDataObject, displaySetInstanceUid) {
|
||||
if (volumeCache[displaySetInstanceUid]) {
|
||||
return volumeCache[displaySetInstanceUid];
|
||||
}
|
||||
|
||||
const { vtkImageData, imageMetaData0 } = imageDataObject;
|
||||
const { windowWidth, windowCenter, modality } = imageMetaData0;
|
||||
|
||||
const { lower, upper } = _getRangeFromWindowLevels(
|
||||
windowWidth,
|
||||
windowCenter,
|
||||
modality
|
||||
);
|
||||
const volumeActor = vtkVolume.newInstance();
|
||||
const volumeMapper = vtkVolumeMapper.newInstance();
|
||||
|
||||
volumeActor.setMapper(volumeMapper);
|
||||
volumeMapper.setInputData(data);
|
||||
volumeMapper.setInputData(vtkImageData);
|
||||
|
||||
const range = data
|
||||
.getPointData()
|
||||
.getScalars()
|
||||
.getRange();
|
||||
|
||||
// TODO: For PET we might want to just set this to 0-5 SUV
|
||||
volumeActor
|
||||
.getProperty()
|
||||
.getRGBTransferFunction(0)
|
||||
.setRange(range[0], range[1]);
|
||||
.setRange(lower, upper);
|
||||
|
||||
// TODO: Should look into implementing autoAdjustSampleDistance in vtk
|
||||
const sampleDistance =
|
||||
1.2 *
|
||||
Math.sqrt(
|
||||
data
|
||||
.getSpacing()
|
||||
.map(v => v * v)
|
||||
.reduce((a, b) => a + b, 0)
|
||||
);
|
||||
const spacing = vtkImageData.getSpacing();
|
||||
// Set the sample distance to half the mean length of one side. This is where the divide by 6 comes from.
|
||||
// https://github.com/Kitware/VTK/blob/6b559c65bb90614fb02eb6d1b9e3f0fca3fe4b0b/Rendering/VolumeOpenGL2/vtkSmartVolumeMapper.cxx#L344
|
||||
const sampleDistance = (spacing[0] + spacing[1] + spacing[2]) / 6;
|
||||
|
||||
volumeMapper.setSampleDistance(sampleDistance);
|
||||
|
||||
// Be generous to surpress warnings, as the logging really hurts performance.
|
||||
// TODO: maybe we should auto adjust samples to 1000.
|
||||
volumeMapper.setMaximumSamplesPerRay(4000);
|
||||
|
||||
volumeCache[displaySetInstanceUid] = volumeActor;
|
||||
|
||||
return volumeActor;
|
||||
}
|
||||
|
||||
async setStateFromProps() {
|
||||
setStateFromProps() {
|
||||
const { studies, displaySet } = this.props.viewportData;
|
||||
const {
|
||||
studyInstanceUid,
|
||||
@@ -238,8 +253,7 @@ class OHIFVTKViewport extends Component {
|
||||
}
|
||||
|
||||
const sopClassUid = sopClassUids[0];
|
||||
|
||||
let { data, labelmap } = await this.getViewportData(
|
||||
const imageDataObject = this.getViewportData(
|
||||
studies,
|
||||
studyInstanceUid,
|
||||
displaySetInstanceUid,
|
||||
@@ -248,29 +262,51 @@ class OHIFVTKViewport extends Component {
|
||||
frameIndex
|
||||
);
|
||||
|
||||
this.imageDataObject = imageDataObject;
|
||||
|
||||
// TODO: Temporarily disabling this since it is not yet
|
||||
// being used and hurts performance significantly.
|
||||
/*if (!labelmap) {
|
||||
labelmap = createLabelMapImageData(data);
|
||||
}*/
|
||||
|
||||
const volumeActor = this.getOrCreateVolume(data, displaySetInstanceUid);
|
||||
const volumeActor = this.getOrCreateVolume(
|
||||
imageDataObject,
|
||||
displaySetInstanceUid
|
||||
);
|
||||
|
||||
this.setState({
|
||||
volumes: [volumeActor],
|
||||
paintFilterBackgroundImageData: data,
|
||||
paintFilterLabelMapImageData: labelmap,
|
||||
paintFilterBackgroundImageData: imageDataObject.vtkImageData,
|
||||
paintFilterLabelMapImageData: null, // TODO
|
||||
percentComplete: 0,
|
||||
});
|
||||
|
||||
this.setState(
|
||||
{
|
||||
paintFilterBackgroundImageData: imageDataObject.vtkImageData,
|
||||
paintFilterLabelMapImageData: null, // TODO
|
||||
percentComplete: 0,
|
||||
},
|
||||
() => {
|
||||
this.loadProgressively(imageDataObject);
|
||||
|
||||
// TODO: There must be a better way to do this.
|
||||
// We do this so that if all the data is available the react-vtkjs-viewport
|
||||
// Will render _something_ before the volumes are set and the volume
|
||||
// Construction that happens in react-vtkjs-viewport locks up the CPU.
|
||||
setTimeout(() => {
|
||||
this.setState({
|
||||
volumes: [volumeActor],
|
||||
});
|
||||
}, 200);
|
||||
}
|
||||
);
|
||||
}
|
||||
|
||||
componentDidMount() {
|
||||
this.setStateFromProps();
|
||||
}
|
||||
|
||||
componentWillUnmount() {
|
||||
vtkViewportSubscriptionManager.unsubscribe(this.props.viewportIndex);
|
||||
}
|
||||
|
||||
componentDidUpdate(prevProps) {
|
||||
const { studies, displaySet } = this.props.viewportData;
|
||||
const prevDisplaySet = prevProps.viewportData.displaySet;
|
||||
@@ -285,6 +321,37 @@ class OHIFVTKViewport extends Component {
|
||||
}
|
||||
}
|
||||
|
||||
loadProgressively(imageDataObject) {
|
||||
loadImageData(imageDataObject);
|
||||
|
||||
const { isLoading, insertPixelDataPromises } = imageDataObject;
|
||||
|
||||
const numberOfFrames = insertPixelDataPromises.length;
|
||||
|
||||
if (!isLoading) {
|
||||
this.setState({ isLoaded: true });
|
||||
return;
|
||||
}
|
||||
|
||||
insertPixelDataPromises.forEach(promise => {
|
||||
promise.then(numberProcessed => {
|
||||
const percentComplete = Math.floor(
|
||||
(numberProcessed * 100) / numberOfFrames
|
||||
);
|
||||
|
||||
if (percentComplete !== this.state.percentComplete) {
|
||||
this.setState({
|
||||
percentComplete,
|
||||
});
|
||||
}
|
||||
});
|
||||
});
|
||||
|
||||
Promise.all(insertPixelDataPromises).then(() => {
|
||||
this.setState({ isLoaded: true });
|
||||
});
|
||||
}
|
||||
|
||||
render() {
|
||||
let childrenWithProps = null;
|
||||
|
||||
@@ -302,21 +369,23 @@ class OHIFVTKViewport extends Component {
|
||||
|
||||
return (
|
||||
<>
|
||||
{this.state.volumes ? (
|
||||
<ConnectedVTKViewport
|
||||
volumes={this.state.volumes}
|
||||
paintFilterLabelMapImageData={
|
||||
this.state.paintFilterLabelMapImageData
|
||||
}
|
||||
paintFilterBackgroundImageData={
|
||||
this.state.paintFilterBackgroundImageData
|
||||
}
|
||||
viewportIndex={this.props.viewportIndex}
|
||||
/>
|
||||
) : (
|
||||
<div style={style}>
|
||||
<LoadingIndicator />
|
||||
</div>
|
||||
<div style={style}>
|
||||
{!this.state.isLoaded && (
|
||||
<LoadingIndicator percentComplete={this.state.percentComplete} />
|
||||
)}
|
||||
{this.state.volumes && (
|
||||
<ConnectedVTKViewport
|
||||
volumes={this.state.volumes}
|
||||
paintFilterLabelMapImageData={
|
||||
this.state.paintFilterLabelMapImageData
|
||||
}
|
||||
paintFilterBackgroundImageData={
|
||||
this.state.paintFilterBackgroundImageData
|
||||
}
|
||||
viewportIndex={this.props.viewportIndex}
|
||||
/>
|
||||
)}
|
||||
</div>
|
||||
)}
|
||||
{childrenWithProps}
|
||||
</>
|
||||
@@ -324,4 +393,32 @@ class OHIFVTKViewport extends Component {
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Takes window levels and converts them to a range (lower/upper)
|
||||
* for use with VTK RGBTransferFunction
|
||||
*
|
||||
* @private
|
||||
* @param {number} [width] - the width of our window
|
||||
* @param {number} [center] - the center of our window
|
||||
* @param {string} [modality] - 'PT', 'CT', etc.
|
||||
* @returns { lower, upper } - range
|
||||
*/
|
||||
function _getRangeFromWindowLevels(width, center, modality = undefined) {
|
||||
const levelsAreNotNumbers = isNaN(center) || isNaN(width);
|
||||
|
||||
if (levelsAreNotNumbers) {
|
||||
return { lower: 0, upper: 512 };
|
||||
}
|
||||
|
||||
// For PET just set the range to 0-5 SUV
|
||||
if (modality === 'PT') {
|
||||
return { lower: 0, upper: 5 };
|
||||
}
|
||||
|
||||
return {
|
||||
lower: center - width / 2.0,
|
||||
upper: center + width / 2.0,
|
||||
};
|
||||
}
|
||||
|
||||
export default OHIFVTKViewport;
|
||||
@@ -1,69 +1,19 @@
|
||||
import {
|
||||
vtkInteractorStyleMPRCrosshairs,
|
||||
vtkInteractorStyleMPRWindowLevel,
|
||||
vtkInteractorStyleMPRSlice,
|
||||
vtkInteractorStyleMPRRotate,
|
||||
vtkSVGCrosshairsWidget,
|
||||
vtkSVGWidgetManager,
|
||||
} from 'react-vtkjs-viewport';
|
||||
|
||||
import setMPRLayout from './utils/setMPRLayout.js';
|
||||
import setViewportToVTK from './utils/setViewportToVTK.js';
|
||||
import vtkViewportSubscriptionManager from './utils/vtkViewportSubscriptionManager.js';
|
||||
import vtkCoordinate from 'vtk.js/Sources/Rendering/Core/Coordinate';
|
||||
import vtkMath from 'vtk.js/Sources/Common/Core/Math';
|
||||
import vtkMatrixBuilder from 'vtk.js/Sources/Common/Core/MatrixBuilder';
|
||||
import Constants from 'vtk.js/Sources/Rendering/Core/VolumeMapper/Constants.js';
|
||||
import throttle from 'lodash.throttle';
|
||||
|
||||
const { BlendMode } = Constants;
|
||||
|
||||
// TODO: Put this somewhere else
|
||||
let apis = {};
|
||||
let currentSlabThickness = 0.1;
|
||||
let defaultSlabThickness = 0.1;
|
||||
|
||||
function getCrosshairCallbackForIndex(index) {
|
||||
return ({ worldPos }) => {
|
||||
// Set camera focal point to world coordinate for linked views
|
||||
apis.forEach((api, viewportIndex) => {
|
||||
if (viewportIndex !== index) {
|
||||
// We are basically doing the same as getSlice but with the world coordinate
|
||||
// that we want to jump to instead of the camera focal point.
|
||||
// I would rather do the camera adjustment directly but I keep
|
||||
// doing it wrong and so this is good enough for now.
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
const sliceNormal = istyle.getSliceNormal();
|
||||
const transform = vtkMatrixBuilder
|
||||
.buildFromDegree()
|
||||
.identity()
|
||||
.rotateFromDirections(sliceNormal, [1, 0, 0]);
|
||||
|
||||
const mutatedWorldPos = worldPos.slice();
|
||||
transform.apply(mutatedWorldPos);
|
||||
const slice = mutatedWorldPos[0];
|
||||
|
||||
istyle.setSlice(slice);
|
||||
|
||||
renderWindow.render();
|
||||
}
|
||||
|
||||
const renderer = api.genericRenderWindow.getRenderer();
|
||||
const wPos = vtkCoordinate.newInstance();
|
||||
wPos.setCoordinateSystemToWorld();
|
||||
wPos.setValue(worldPos);
|
||||
|
||||
const displayPosition = wPos.getComputedDisplayValue(renderer);
|
||||
const { svgWidgetManager } = api;
|
||||
api.svgWidgets.crosshairsWidget.setPoint(
|
||||
displayPosition[0],
|
||||
displayPosition[1]
|
||||
);
|
||||
svgWidgetManager.render();
|
||||
});
|
||||
};
|
||||
}
|
||||
|
||||
async function _getActiveViewportVTKApi(viewports) {
|
||||
const {
|
||||
@@ -105,8 +55,6 @@ async function _getActiveViewportVTKApi(viewports) {
|
||||
|
||||
function _setView(api, sliceNormal, viewUp) {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const renderer = api.genericRenderWindow.getRenderer();
|
||||
const camera = renderer.getActiveCamera();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
istyle.setSliceNormal(...sliceNormal);
|
||||
istyle.setViewUp(...viewUp);
|
||||
@@ -114,41 +62,6 @@ function _setView(api, sliceNormal, viewUp) {
|
||||
renderWindow.render();
|
||||
}
|
||||
|
||||
function switchMPRInteractors(api, istyle) {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const renderer = api.genericRenderWindow.getRenderer();
|
||||
const camera = renderer.getActiveCamera();
|
||||
const currentIStyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
let currentViewport;
|
||||
if (currentIStyle.getViewport && istyle.getViewport) {
|
||||
currentViewport = currentIStyle.getViewport();
|
||||
}
|
||||
|
||||
let currentSlabThickness;
|
||||
if (currentIStyle.getSlabThickness && istyle.getSlabThickness) {
|
||||
currentSlabThickness = currentIStyle.getSlabThickness();
|
||||
defaultSlabThickness = currentSlabThickness;
|
||||
}
|
||||
|
||||
renderWindow.getInteractor().setInteractorStyle(istyle);
|
||||
|
||||
// TODO: Not sure why this is required the second time this function is called
|
||||
istyle.setInteractor(renderWindow.getInteractor());
|
||||
|
||||
if (currentViewport) {
|
||||
istyle.setViewport(currentViewport);
|
||||
}
|
||||
|
||||
if (istyle.getVolumeMapper() !== api.volumes[0]) {
|
||||
if (currentSlabThickness) {
|
||||
istyle.setSlabThickness(currentSlabThickness);
|
||||
}
|
||||
|
||||
istyle.setVolumeMapper(api.volumes[0]);
|
||||
}
|
||||
}
|
||||
|
||||
const actions = {
|
||||
axial: async ({ viewports }) => {
|
||||
const api = await _getActiveViewportVTKApi(viewports);
|
||||
@@ -175,52 +88,56 @@ const actions = {
|
||||
apis.forEach(api => {
|
||||
const istyle = vtkInteractorStyleMPRRotate.newInstance();
|
||||
|
||||
switchMPRInteractors(api, istyle);
|
||||
api.setInteractorStyle({ istyle });
|
||||
});
|
||||
},
|
||||
enableCrosshairsTool: () => {
|
||||
apis.forEach((api, index) => {
|
||||
apis.forEach((api, apiIndex) => {
|
||||
const istyle = vtkInteractorStyleMPRCrosshairs.newInstance();
|
||||
|
||||
switchMPRInteractors(api, istyle);
|
||||
|
||||
istyle.setCallback(getCrosshairCallbackForIndex(index));
|
||||
api.setInteractorStyle({
|
||||
istyle,
|
||||
configuration: { apis, apiIndex },
|
||||
});
|
||||
});
|
||||
},
|
||||
enableLevelTool: () => {
|
||||
function updateVOI(apis, windowWidth, windowCenter) {
|
||||
apis.forEach(api => {
|
||||
api.updateVOI(windowWidth, windowCenter);
|
||||
});
|
||||
}
|
||||
|
||||
const throttledUpdateVOIs = throttle(updateVOI, 16, { trailing: true }); // ~ 60 fps
|
||||
|
||||
const callbacks = {
|
||||
setOnLevelsChanged: ({ windowCenter, windowWidth }) => {
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
|
||||
renderWindow.render();
|
||||
});
|
||||
|
||||
throttledUpdateVOIs(apis, windowWidth, windowCenter);
|
||||
},
|
||||
};
|
||||
|
||||
apis.forEach(api => {
|
||||
const istyle = vtkInteractorStyleMPRWindowLevel.newInstance();
|
||||
|
||||
switchMPRInteractors(api, istyle);
|
||||
api.setInteractorStyle({ istyle, callbacks });
|
||||
});
|
||||
},
|
||||
setSlabThickness: ({ slabThickness }) => {
|
||||
currentSlabThickness = slabThickness;
|
||||
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
if (istyle.setSlabThickness) {
|
||||
istyle.setSlabThickness(currentSlabThickness);
|
||||
}
|
||||
|
||||
renderWindow.render();
|
||||
api.setSlabThickness(slabThickness);
|
||||
});
|
||||
},
|
||||
changeSlabThickness: ({ change }) => {
|
||||
currentSlabThickness += change;
|
||||
currentSlabThickness = Math.max(currentSlabThickness, 0.1);
|
||||
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
const slabThickness = Math.max(api.getSlabThickness() + change, 0.1);
|
||||
|
||||
if (istyle.setSlabThickness) {
|
||||
istyle.setSlabThickness(currentSlabThickness);
|
||||
}
|
||||
|
||||
renderWindow.render();
|
||||
api.setSlabThickness(slabThickness);
|
||||
});
|
||||
},
|
||||
setBlendModeToComposite: () => {
|
||||
@@ -228,13 +145,15 @@ const actions = {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
const slabThickness = api.getSlabThickness();
|
||||
|
||||
const mapper = api.volumes[0].getMapper();
|
||||
if (mapper.setBlendModeToComposite) {
|
||||
mapper.setBlendModeToComposite();
|
||||
}
|
||||
|
||||
if (istyle.setSlabThickness) {
|
||||
istyle.setSlabThickness(defaultSlabThickness);
|
||||
istyle.setSlabThickness(slabThickness);
|
||||
}
|
||||
renderWindow.render();
|
||||
});
|
||||
@@ -252,7 +171,6 @@ const actions = {
|
||||
setBlendMode: ({ blendMode }) => {
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
api.volumes[0].getMapper().setBlendMode(blendMode);
|
||||
|
||||
@@ -260,78 +178,60 @@ const actions = {
|
||||
});
|
||||
},
|
||||
mpr2d: async ({ viewports }) => {
|
||||
// TODO push a lot of this backdoor logic lower down to the library level.
|
||||
const displaySet =
|
||||
viewports.viewportSpecificData[viewports.activeViewportIndex];
|
||||
|
||||
let apiByViewport;
|
||||
// Get current VOI if cornerstone viewport.
|
||||
const cornerstoneVOI = getVOIFromCornerstoneViewport(displaySet);
|
||||
|
||||
const viewportProps = [
|
||||
{
|
||||
//Axial
|
||||
orientation: {
|
||||
sliceNormal: [0, 0, 1],
|
||||
viewUp: [0, -1, 0],
|
||||
},
|
||||
},
|
||||
{
|
||||
// Sagital
|
||||
orientation: {
|
||||
sliceNormal: [1, 0, 0],
|
||||
viewUp: [0, 0, 1],
|
||||
},
|
||||
},
|
||||
{
|
||||
// Coronal
|
||||
orientation: {
|
||||
sliceNormal: [0, 1, 0],
|
||||
viewUp: [0, 0, 1],
|
||||
},
|
||||
},
|
||||
];
|
||||
|
||||
try {
|
||||
apiByViewport = await setMPRLayout(displaySet);
|
||||
apis = await setMPRLayout(displaySet, viewportProps, 1, 3);
|
||||
} catch (error) {
|
||||
throw new Error(error);
|
||||
}
|
||||
|
||||
apis = apiByViewport;
|
||||
if (cornerstoneVOI) {
|
||||
setVOI(cornerstoneVOI);
|
||||
}
|
||||
|
||||
const rgbTransferFunction = apiByViewport[0].volumes[0]
|
||||
.getProperty()
|
||||
.getRGBTransferFunction(0);
|
||||
|
||||
const onModifiedSubscription = rgbTransferFunction.onModified(() => {
|
||||
apiByViewport.forEach(a => {
|
||||
const renderWindow = a.genericRenderWindow.getRenderWindow();
|
||||
|
||||
renderWindow.render();
|
||||
});
|
||||
});
|
||||
|
||||
vtkViewportSubscriptionManager.pushSubscription(0, onModifiedSubscription);
|
||||
|
||||
apiByViewport.forEach((api, index) => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const renderer = api.genericRenderWindow.getRenderer();
|
||||
const camera = renderer.getActiveCamera();
|
||||
// Add widgets and set default interactorStyle of each viewport.
|
||||
apis.forEach((api, apiIndex) => {
|
||||
api.addSVGWidget(
|
||||
vtkSVGCrosshairsWidget.newInstance(),
|
||||
'crosshairsWidget'
|
||||
);
|
||||
|
||||
const istyle = vtkInteractorStyleMPRCrosshairs.newInstance();
|
||||
renderWindow.getInteractor().setInteractorStyle(istyle);
|
||||
|
||||
istyle.setVolumeMapper(api.volumes[0]);
|
||||
istyle.setCallback(getCrosshairCallbackForIndex(index));
|
||||
|
||||
const svgWidgetManager = vtkSVGWidgetManager.newInstance();
|
||||
svgWidgetManager.setRenderer(renderer);
|
||||
svgWidgetManager.setScale(1);
|
||||
|
||||
const crosshairsWidget = vtkSVGCrosshairsWidget.newInstance();
|
||||
|
||||
svgWidgetManager.addWidget(crosshairsWidget);
|
||||
svgWidgetManager.render();
|
||||
|
||||
api.svgWidgetManager = svgWidgetManager;
|
||||
api.svgWidgets = {
|
||||
crosshairsWidget,
|
||||
};
|
||||
|
||||
switch (index) {
|
||||
default:
|
||||
case 0:
|
||||
//Axial
|
||||
istyle.setSliceNormal(0, 0, 1);
|
||||
istyle.setViewUp(0, -1, 0);
|
||||
|
||||
break;
|
||||
case 1:
|
||||
// sagittal
|
||||
istyle.setSliceNormal(1, 0, 0);
|
||||
istyle.setViewUp(0, 0, 1);
|
||||
break;
|
||||
case 2:
|
||||
// Coronal
|
||||
istyle.setSliceNormal(0, 1, 0);
|
||||
istyle.setViewUp(0, 0, 1);
|
||||
break;
|
||||
}
|
||||
|
||||
renderWindow.render();
|
||||
api.setInteractorStyle({
|
||||
istyle,
|
||||
configuration: { apis, apiIndex },
|
||||
});
|
||||
});
|
||||
},
|
||||
};
|
||||
@@ -421,3 +321,41 @@ export default {
|
||||
definitions,
|
||||
defaultContext: 'ACTIVE_VIEWPORT::VTK',
|
||||
};
|
||||
|
||||
function getVOIFromCornerstoneViewport(displaySet) {
|
||||
const cornerstoneElement = cornerstone.getEnabledElement(displaySet.dom);
|
||||
|
||||
if (cornerstoneElement) {
|
||||
const imageId = cornerstoneElement.image.imageId;
|
||||
|
||||
const { modality } = cornerstone.metaData.get(
|
||||
'generalSeriesModule',
|
||||
imageId
|
||||
);
|
||||
|
||||
if (modality !== 'PT') {
|
||||
const { windowWidth, windowCenter } = cornerstoneElement.viewport.voi;
|
||||
|
||||
return {
|
||||
windowWidth,
|
||||
windowCenter,
|
||||
};
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
function setVOI(voi) {
|
||||
const { windowWidth, windowCenter } = voi;
|
||||
const lower = windowCenter - windowWidth / 2.0;
|
||||
const upper = windowCenter + windowWidth / 2.0;
|
||||
|
||||
const rgbTransferFunction = apis[0].volumes[0]
|
||||
.getProperty()
|
||||
.getRGBTransferFunction(0);
|
||||
|
||||
rgbTransferFunction.setRange(lower, upper);
|
||||
|
||||
apis.forEach(api => {
|
||||
api.updateVOI(windowWidth, windowCenter);
|
||||
});
|
||||
}
|
||||
@@ -1,7 +1,7 @@
|
||||
import React, { useState, useEffect } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import classnames from 'classnames';
|
||||
import { Range, Checkbox, Select } from '@ohif/ui';
|
||||
import { Range, Checkbox, OldSelect } from '@ohif/ui';
|
||||
|
||||
import './slab-thickness-toolbar-button.styl';
|
||||
|
||||
@@ -16,6 +16,10 @@ const ToolbarLabel = props => {
|
||||
return <div className="toolbar-button-label">{label}</div>;
|
||||
};
|
||||
|
||||
ToolbarLabel.propTypes = {
|
||||
label: PropTypes.string.isRequired,
|
||||
};
|
||||
|
||||
const ToolbarSlider = props => {
|
||||
const { value, min, max, onChange } = props;
|
||||
return (
|
||||
@@ -33,6 +37,13 @@ const ToolbarSlider = props => {
|
||||
);
|
||||
};
|
||||
|
||||
ToolbarSlider.propTypes = {
|
||||
value: PropTypes.number.isRequired,
|
||||
min: PropTypes.number.isRequired,
|
||||
max: PropTypes.number.isRequired,
|
||||
onChange: PropTypes.func.isRequired,
|
||||
};
|
||||
|
||||
const _getSelectOptions = button => {
|
||||
return button.operationButtons.map(button => {
|
||||
return {
|
||||
@@ -184,12 +195,12 @@ function SlabThicknessToolbarComponent({
|
||||
checked={state.modeChecked}
|
||||
onChange={onChangeCheckbox}
|
||||
></Checkbox>
|
||||
<Select
|
||||
<OldSelect
|
||||
key="toolbar-select"
|
||||
options={selectOptions}
|
||||
value={selectOptions[INITIAL_OPTION_INDEX].value}
|
||||
onChange={onChangeSelect}
|
||||
></Select>
|
||||
></OldSelect>
|
||||
</div>
|
||||
</div>
|
||||
);
|
||||
|
||||
@@ -1,11 +1,23 @@
|
||||
import setLayoutAndViewportData from './setLayoutAndViewportData.js';
|
||||
|
||||
export default function setMPRLayout(displaySet) {
|
||||
export default function setMPRLayout(
|
||||
displaySet,
|
||||
viewportPropsArray,
|
||||
numRows = 1,
|
||||
numColumns = 1
|
||||
) {
|
||||
return new Promise((resolve, reject) => {
|
||||
const viewports = [];
|
||||
const numRows = 1;
|
||||
const numColumns = 3;
|
||||
const numViewports = numRows * numColumns;
|
||||
|
||||
if (viewportPropsArray && viewportPropsArray.length !== numViewports) {
|
||||
reject(
|
||||
new Error(
|
||||
'viewportProps is supplied but its length is not equal to numViewports'
|
||||
)
|
||||
);
|
||||
}
|
||||
|
||||
const viewportSpecificData = {};
|
||||
|
||||
for (let i = 0; i < numViewports; i++) {
|
||||
@@ -17,8 +29,8 @@ export default function setMPRLayout(displaySet) {
|
||||
const apis = [];
|
||||
viewports.forEach((viewport, index) => {
|
||||
apis[index] = null;
|
||||
const viewportProps = viewportPropsArray[index];
|
||||
viewports[index] = Object.assign({}, viewports[index], {
|
||||
// plugin: 'vtk',
|
||||
vtk: {
|
||||
mode: 'mpr', // TODO: not used
|
||||
afterCreation: api => {
|
||||
@@ -28,6 +40,7 @@ export default function setMPRLayout(displaySet) {
|
||||
resolve(apis);
|
||||
}
|
||||
},
|
||||
...viewportProps,
|
||||
},
|
||||
});
|
||||
});
|
||||
|
||||
@@ -1,28 +0,0 @@
|
||||
const subscriptions = [];
|
||||
|
||||
// This is pretty hacky right now, but it makes sure we don't keep adding subscriptions.
|
||||
// TODO -> Nuke this and move it up a layer once we have more vigorous layout support.
|
||||
|
||||
const vtkViewportSubscriptionManager = {
|
||||
subscriptions,
|
||||
pushSubscription(viewportIndex, subscription) {
|
||||
if (!Array.isArray(subscriptions[viewportIndex])) {
|
||||
subscriptions[viewportIndex] = [];
|
||||
}
|
||||
|
||||
subscriptions[viewportIndex].push(subscription);
|
||||
},
|
||||
unsubscribe(viewportIndex) {
|
||||
if (!subscriptions[viewportIndex]) {
|
||||
return;
|
||||
}
|
||||
|
||||
while (subscriptions[viewportIndex].length) {
|
||||
subscriptions[viewportIndex].pop().unsubscribe();
|
||||
}
|
||||
|
||||
subscriptions[viewportIndex] = null;
|
||||
},
|
||||
};
|
||||
|
||||
export default vtkViewportSubscriptionManager;
|
||||
+3
-14
@@ -8,15 +8,6 @@
|
||||
# managed by CircleCI and deployed to our Google Hosting
|
||||
#
|
||||
|
||||
# Settings in the [build] context are global and are applied to all contexts
|
||||
# unless otherwise overridden by more specific contexts.
|
||||
[build]
|
||||
# Directory to change to before starting a build.
|
||||
# This is where we will look for package.json/.nvmrc/etc.
|
||||
base = ""
|
||||
publish = "project/build-output/"
|
||||
|
||||
|
||||
# NODE_VERSION in root `.nvmrc` takes priority
|
||||
# YARN_FLAGS: https://www.netlify.com/docs/build-gotchas/#yarn
|
||||
[build.environment]
|
||||
@@ -28,17 +19,15 @@
|
||||
|
||||
# Production context: all deploys from the Production branch set in your site's
|
||||
# deploy contexts will inherit these settings.
|
||||
# [context.production]
|
||||
# publish = "project/output/"
|
||||
# command = "make publish"
|
||||
# environment = { ACCESS_TOKEN = "super secret", NODE_VERSION = "8.0.1" }
|
||||
[context.production]
|
||||
ignore = "exit 0" # Never build production; We'll let our CI do that
|
||||
|
||||
# Deploy Preview context: all deploys generated from a pull/merge request will
|
||||
# inherit these settings.
|
||||
[context.deploy-preview]
|
||||
base = ""
|
||||
publish = ".netlify/www/"
|
||||
command = "yarn config set workspaces-experimental true && chmod +x .netlify/build-deploy-preview.sh && .netlify/build-deploy-preview.sh"
|
||||
command = "chmod +x .netlify/build-deploy-preview.sh && .netlify/build-deploy-preview.sh"
|
||||
|
||||
[[headers]]
|
||||
# Define which paths this specific [[headers]] block will cover.
|
||||
|
||||
+7
-1
@@ -26,6 +26,7 @@
|
||||
"test:unit": "jest --collectCoverage",
|
||||
"test:unit:ci": "lerna run test:unit:ci --parallel --stream",
|
||||
"test:e2e": "lerna run test:e2e --stream",
|
||||
"test:e2e:ci": "lerna run test:e2e:ci --stream",
|
||||
"test:e2e:dist": "lerna run test:e2e:dist --stream",
|
||||
"test:e2e:serve": "lerna run test:e2e:serve --stream",
|
||||
"see-changed": "lerna changed",
|
||||
@@ -49,6 +50,7 @@
|
||||
"@babel/plugin-transform-runtime": "^7.5.0",
|
||||
"@babel/preset-env": "^7.5.0",
|
||||
"@babel/preset-react": "^7.0.0",
|
||||
"@percy/cypress": "^2.2.0",
|
||||
"babel-eslint": "9.x",
|
||||
"babel-loader": "^8.0.6",
|
||||
"babel-plugin-inline-react-svg": "1.1.0",
|
||||
@@ -57,16 +59,20 @@
|
||||
"copy-webpack-plugin": "^5.0.3",
|
||||
"cross-env": "^5.2.0",
|
||||
"css-loader": "^3.2.0",
|
||||
"dotenv": "^8.1.0",
|
||||
"eslint": "5.16.0",
|
||||
"eslint-config-prettier": "^6.4.0",
|
||||
"eslint-config-react-app": "^4.0.1",
|
||||
"eslint-plugin-flowtype": "2.x",
|
||||
"eslint-plugin-import": "2.x",
|
||||
"eslint-plugin-jsx-a11y": "6.x",
|
||||
"eslint-plugin-node": "^9.1.0",
|
||||
"eslint-plugin-prettier": "^3.1.1",
|
||||
"eslint-plugin-promise": "^4.2.1",
|
||||
"eslint-plugin-react": "7.x",
|
||||
"eslint-plugin-react-hooks": "1.5.0",
|
||||
"extract-css-chunks-webpack-plugin": "^4.5.4",
|
||||
"favicons-webpack-plugin": "^1.0.2",
|
||||
"html-webpack-plugin": "^3.2.0",
|
||||
"husky": "^3.0.0",
|
||||
"jest": "^24.8.0",
|
||||
@@ -97,7 +103,7 @@
|
||||
"webpack-dev-server": "^3.7.2",
|
||||
"webpack-hot-middleware": "^2.25.0",
|
||||
"webpack-merge": "^4.2.1",
|
||||
"workbox-webpack-plugin": "^4.3.1",
|
||||
"workbox-webpack-plugin": "^5.0.0-beta.1",
|
||||
"worker-loader": "^2.0.0"
|
||||
},
|
||||
"husky": {
|
||||
|
||||
@@ -3,6 +3,157 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
# [1.10.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.9.1...@ohif/core@1.10.0) (2019-11-15)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Inject into Extension Modules / improve tests ([f63d8a7](https://github.com/OHIF/Viewers/commit/f63d8a73d867ad9dfd8ee0cad74edce180eb34f0))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.9.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.9.0...@ohif/core@1.9.1) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.9.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.8.0...@ohif/core@1.9.0) (2019-11-13)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* expose UiNotifications service ([#1172](https://github.com/OHIF/Viewers/issues/1172)) ([5c04e34](https://github.com/OHIF/Viewers/commit/5c04e34c8fb2394ab7acd9eb4f2ab12afeb2f255))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.8.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.7.1...@ohif/core@1.8.0) (2019-11-12)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update hotkeys and user preferences modal ([#1135](https://github.com/OHIF/Viewers/issues/1135)) ([e62f5f8](https://github.com/OHIF/Viewers/commit/e62f5f8dd28ab363f23671cd21cee115abb870ff)), closes [#923](https://github.com/OHIF/Viewers/issues/923)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.7.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.7.0...@ohif/core@1.7.1) (2019-11-08)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Add a fallback metadata provider which pulls metadata from WADO-… ([#1158](https://github.com/OHIF/Viewers/issues/1158)) ([31b1adf](https://github.com/OHIF/Viewers/commit/31b1adfa5993d6c8e3e9c8b03fa9856f2621b037))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.7.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.6.2...@ohif/core@1.7.0) (2019-11-05)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Filter by url query param for seriesInstnaceUID ([#1117](https://github.com/OHIF/Viewers/issues/1117)) ([e208f2e](https://github.com/OHIF/Viewers/commit/e208f2e6a9c49b16dadead0a917f657cf023929a)), closes [#1118](https://github.com/OHIF/Viewers/issues/1118)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.6.2](https://github.com/OHIF/Viewers/compare/@ohif/core@1.6.1...@ohif/core@1.6.2) (2019-11-05)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* [#1075](https://github.com/OHIF/Viewers/issues/1075) Returning to the Study List before all series have finishe… ([#1090](https://github.com/OHIF/Viewers/issues/1090)) ([ecaf578](https://github.com/OHIF/Viewers/commit/ecaf578f92dc40294cec7ff9b272fb432dec4125))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.6.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.6.0...@ohif/core@1.6.1) (2019-10-31)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* application crash if patientName is an object ([#1138](https://github.com/OHIF/Viewers/issues/1138)) ([64cf3b3](https://github.com/OHIF/Viewers/commit/64cf3b324da2383a927af1df2d46db2fca5318aa))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.6.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.5.2...@ohif/core@1.6.0) (2019-10-26)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Snapshot Download Tool ([#840](https://github.com/OHIF/Viewers/issues/840)) ([450e098](https://github.com/OHIF/Viewers/commit/450e0981a5ba054fcfcb85eeaeb18371af9088f8))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.5.2](https://github.com/OHIF/Viewers/compare/@ohif/core@1.5.1...@ohif/core@1.5.2) (2019-10-25)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* set SR in ActiveViewport by clicking thumb ([#1091](https://github.com/OHIF/Viewers/issues/1091)) ([986b7ae](https://github.com/OHIF/Viewers/commit/986b7ae2bf4f7d27f326e62f93285ce20eaf0a79))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.5.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.5.0...@ohif/core@1.5.1) (2019-10-25)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Orthographic MPR fix ([#1092](https://github.com/OHIF/Viewers/issues/1092)) ([460e375](https://github.com/OHIF/Viewers/commit/460e375f0aa75d35f7a46b4d48e6cc706019956d))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.5.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.4.0...@ohif/core@1.5.0) (2019-10-25)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Allow routes to load Google Cloud DICOM Stores in the Study List ([#1069](https://github.com/OHIF/Viewers/issues/1069)) ([21b586b](https://github.com/OHIF/Viewers/commit/21b586b08f3dde6613859712a9e0577dece564db))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.4.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.3.2...@ohif/core@1.4.0) (2019-10-15)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Only allow reconstruction of datasets that make sense ([#1010](https://github.com/OHIF/Viewers/issues/1010)) ([2d75e01](https://github.com/OHIF/Viewers/commit/2d75e01)), closes [#561](https://github.com/OHIF/Viewers/issues/561)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.2](https://github.com/OHIF/Viewers/compare/@ohif/core@1.3.1...@ohif/core@1.3.2) (2019-10-14)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Return display sets in StudyMetadata._createDisplaySetsForSeries ([#1042](https://github.com/OHIF/Viewers/issues/1042)) ([fc01532](https://github.com/OHIF/Viewers/commit/fc01532))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.3.0...@ohif/core@1.3.1) (2019-10-11)
|
||||
|
||||
**Note:** Version bump only for package @ohif/core
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/core",
|
||||
"version": "1.3.1",
|
||||
"version": "1.10.0",
|
||||
"description": "Generic business logic for web-based medical imaging applications",
|
||||
"author": "OHIF Core Team",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -1,11 +1,14 @@
|
||||
export default function getModalities(modality, modalitiesInStudy) {
|
||||
let modalities = {};
|
||||
if (modality) {
|
||||
modalities = modality;
|
||||
if (!modality && !modalitiesInStudy) {
|
||||
return {};
|
||||
}
|
||||
|
||||
const modalities = modality || {
|
||||
vr: 'CS',
|
||||
Value: [],
|
||||
};
|
||||
|
||||
if (modalitiesInStudy) {
|
||||
// Find vr in modalities
|
||||
if (modalities.vr && modalities.vr === modalitiesInStudy.vr) {
|
||||
for (let i = 0; i < modalitiesInStudy.Value.length; i++) {
|
||||
const value = modalitiesInStudy.Value[i];
|
||||
@@ -14,8 +17,9 @@ export default function getModalities(modality, modalitiesInStudy) {
|
||||
}
|
||||
}
|
||||
} else {
|
||||
modalities = modalitiesInStudy;
|
||||
return modalitiesInStudy;
|
||||
}
|
||||
}
|
||||
|
||||
return modalities;
|
||||
}
|
||||
@@ -1,3 +1,4 @@
|
||||
import cloneDeep from 'lodash.clonedeep';
|
||||
import hotkeys from './hotkeys';
|
||||
import log from './../log.js';
|
||||
|
||||
@@ -51,10 +52,11 @@ export class HotkeysManager {
|
||||
* @param {Boolean} [isDefaultDefinitions]
|
||||
*/
|
||||
setHotkeys(hotkeyDefinitions, isDefaultDefinitions = false) {
|
||||
hotkeyDefinitions.forEach(definition => this.registerHotkeys(definition));
|
||||
const definitions = cloneDeep(hotkeyDefinitions);
|
||||
definitions.forEach(definition => this.registerHotkeys(definition));
|
||||
|
||||
if (isDefaultDefinitions) {
|
||||
this.hotkeyDefaults = hotkeyDefinitions;
|
||||
this.hotkeyDefaults = definitions;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -9,6 +9,7 @@ import { SeriesMetadata } from './SeriesMetadata';
|
||||
import { api } from 'dicomweb-client';
|
||||
// - createStacks
|
||||
import { isImage } from '../../utils/isImage';
|
||||
import isDisplaySetReconstructable from '../../utils/isDisplaySetReconstructable';
|
||||
import isLowPriorityModality from '../../utils/isLowPriorityModality';
|
||||
|
||||
export class StudyMetadata extends Metadata {
|
||||
@@ -121,7 +122,7 @@ export class StudyMetadata extends Metadata {
|
||||
if (displaySet) {
|
||||
displaySet.sopClassModule = true;
|
||||
displaySets.push(displaySet);
|
||||
return;
|
||||
return displaySets;
|
||||
}
|
||||
}
|
||||
|
||||
@@ -146,6 +147,7 @@ export class StudyMetadata extends Metadata {
|
||||
|
||||
if (isMultiFrame(instance)) {
|
||||
displaySet = makeDisplaySet(series, [instance]);
|
||||
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
isClip: true,
|
||||
@@ -620,6 +622,16 @@ const makeDisplaySet = (series, instances) => {
|
||||
imageSet.getImage(0).getRawValue('x00200013')
|
||||
);
|
||||
|
||||
const isReconstructable = isDisplaySetReconstructable(series, instances);
|
||||
|
||||
imageSet.isReconstructable = isReconstructable.value;
|
||||
|
||||
if (isReconstructable.missingFrames) {
|
||||
// TODO -> This is currently unused, but may be used for reconstructing
|
||||
// Volumes with gaps later on.
|
||||
imageSet.missingFrames = isReconstructable.missingFrames;
|
||||
}
|
||||
|
||||
return imageSet;
|
||||
};
|
||||
|
||||
|
||||
@@ -2,12 +2,13 @@ import MODULE_TYPES from './MODULE_TYPES.js';
|
||||
import log from './../log.js';
|
||||
|
||||
export default class ExtensionManager {
|
||||
constructor({ commandsManager }) {
|
||||
constructor({ commandsManager, servicesManager }) {
|
||||
this.modules = {};
|
||||
this.registeredExtensionIds = [];
|
||||
this.moduleTypeNames = Object.values(MODULE_TYPES);
|
||||
//
|
||||
this._commandsManager = commandsManager;
|
||||
this._servicesManager = servicesManager;
|
||||
|
||||
this.moduleTypeNames.forEach(moduleType => {
|
||||
this.modules[moduleType] = [];
|
||||
@@ -66,7 +67,10 @@ export default class ExtensionManager {
|
||||
|
||||
// preRegistrationHook
|
||||
if (extension.preRegistration) {
|
||||
extension.preRegistration(configuration);
|
||||
extension.preRegistration({
|
||||
servicesManager: this._servicesManager,
|
||||
configuration,
|
||||
});
|
||||
}
|
||||
|
||||
// Register Modules
|
||||
@@ -106,7 +110,9 @@ export default class ExtensionManager {
|
||||
}
|
||||
|
||||
try {
|
||||
const extensionModule = getModuleFn();
|
||||
const extensionModule = getModuleFn({
|
||||
servicesManager: this._servicesManager,
|
||||
});
|
||||
|
||||
if (!extensionModule) {
|
||||
log.warn(
|
||||
|
||||
@@ -40,6 +40,30 @@ describe('ExtensionManager.js', () => {
|
||||
});
|
||||
|
||||
describe('registerExtension()', () => {
|
||||
it('calls preRegistration() for extension', () => {
|
||||
// SUT
|
||||
const fakeExtension = { one: '1', preRegistration: jest.fn() };
|
||||
extensionManager.registerExtension(fakeExtension);
|
||||
|
||||
// Assert
|
||||
expect(fakeExtension.preRegistration.mock.calls.length).toBe(1);
|
||||
});
|
||||
|
||||
it('calls preRegistration() passing configuration and servicesManager instance for extension', () => {
|
||||
const configuration = { config: 'Some configuration' };
|
||||
extensionManager._servicesManager = { services: { TestService: {} } };
|
||||
|
||||
// SUT
|
||||
const fakeExtension = { one: '1', preRegistration: jest.fn() };
|
||||
extensionManager.registerExtension(fakeExtension, configuration);
|
||||
|
||||
// Assert
|
||||
expect(fakeExtension.preRegistration.mock.calls[0][0]).toEqual({
|
||||
servicesManager: extensionManager._servicesManager,
|
||||
configuration,
|
||||
});
|
||||
});
|
||||
|
||||
it('logs a warning if the extension is null or undefined', () => {
|
||||
const undefinedExtension = undefined;
|
||||
const nullExtension = null;
|
||||
@@ -110,6 +134,25 @@ describe('ExtensionManager.js', () => {
|
||||
);
|
||||
});
|
||||
|
||||
it('successfully passes a servicesManager instance to each module', () => {
|
||||
extensionManager._servicesManager = { services: { TestService: {} } };
|
||||
|
||||
const extension = {
|
||||
id: 'hello-world',
|
||||
getViewportModule: jest.fn(),
|
||||
getSopClassHandlerModule: jest.fn(),
|
||||
getPanelModule: jest.fn(),
|
||||
getToolbarModule: jest.fn(),
|
||||
getCommandsModule: jest.fn(),
|
||||
};
|
||||
|
||||
extensionManager.registerExtension(extension);
|
||||
|
||||
expect(extension.getViewportModule.mock.calls[0][0]).toEqual({
|
||||
servicesManager: extensionManager._servicesManager,
|
||||
});
|
||||
});
|
||||
|
||||
it('successfully registers a module for each module type', () => {
|
||||
const extension = {
|
||||
id: 'hello-world',
|
||||
|
||||
@@ -1,6 +1,7 @@
|
||||
import './lib';
|
||||
|
||||
import { ExtensionManager, MODULE_TYPES } from './extensions';
|
||||
import { ServicesManager } from './services';
|
||||
import classes, { CommandsManager, HotkeysManager } from './classes/';
|
||||
|
||||
import DICOMWeb from './DICOMWeb';
|
||||
@@ -18,12 +19,15 @@ import ui from './ui';
|
||||
import user from './user.js';
|
||||
import utils from './utils/';
|
||||
|
||||
import { createUINotificationService, createUIModalService } from './services';
|
||||
|
||||
const OHIF = {
|
||||
MODULE_TYPES,
|
||||
//
|
||||
CommandsManager,
|
||||
ExtensionManager,
|
||||
HotkeysManager,
|
||||
ServicesManager,
|
||||
//
|
||||
utils,
|
||||
studies,
|
||||
@@ -41,6 +45,9 @@ const OHIF = {
|
||||
viewer: {},
|
||||
measurements,
|
||||
hangingProtocols,
|
||||
//
|
||||
createUINotificationService,
|
||||
createUIModalService,
|
||||
};
|
||||
|
||||
export {
|
||||
@@ -49,6 +56,7 @@ export {
|
||||
CommandsManager,
|
||||
ExtensionManager,
|
||||
HotkeysManager,
|
||||
ServicesManager,
|
||||
//
|
||||
utils,
|
||||
studies,
|
||||
@@ -65,6 +73,9 @@ export {
|
||||
DICOMWeb,
|
||||
measurements,
|
||||
hangingProtocols,
|
||||
//
|
||||
createUINotificationService,
|
||||
createUIModalService,
|
||||
};
|
||||
|
||||
export { OHIF };
|
||||
|
||||
@@ -8,6 +8,10 @@ describe('Top level exports', () => {
|
||||
'CommandsManager',
|
||||
'ExtensionManager',
|
||||
'HotkeysManager',
|
||||
'ServicesManager',
|
||||
//
|
||||
'createUINotificationService',
|
||||
'createUIModalService',
|
||||
//
|
||||
'utils',
|
||||
'studies',
|
||||
|
||||
@@ -1,18 +1,15 @@
|
||||
import cloneDeep from 'lodash.clonedeep';
|
||||
|
||||
const defaultState = {
|
||||
// Top level key
|
||||
viewer: {
|
||||
// First tab
|
||||
hotKeysData: {
|
||||
// hotkeyName, label, keys, column
|
||||
// zoom: { label: 'Zoom', command: 'Z', column: 0 },
|
||||
},
|
||||
// Second tab
|
||||
windowLevelData: {
|
||||
// order, description, window (int), level (int)
|
||||
// 0: { description: 'Soft tissue', window: '', level: '' },
|
||||
},
|
||||
// First tab
|
||||
hotkeyDefinitions: [
|
||||
// commandName, label, keys
|
||||
// [{ zoom: { label: 'Zoom', keys: ['z'] }}]
|
||||
],
|
||||
// Second tab
|
||||
windowLevelData: {
|
||||
// order, description, window (int), level (int)
|
||||
// 0: { description: 'Soft tissue', window: '', level: '' },
|
||||
},
|
||||
};
|
||||
|
||||
|
||||
@@ -34,7 +34,6 @@ const defaultState = {
|
||||
* @param {Object} [action.viewportSpecificData]
|
||||
*/
|
||||
const viewports = (state = defaultState, action) => {
|
||||
let currentData;
|
||||
let viewportSpecificData;
|
||||
let useActiveViewport = false;
|
||||
switch (action.type) {
|
||||
@@ -85,14 +84,24 @@ const viewports = (state = defaultState, action) => {
|
||||
// Allow fall-through
|
||||
// eslint-disable-next-line
|
||||
case SET_SPECIFIC_DATA: {
|
||||
const layout = cloneDeep(state.layout);
|
||||
const hasPlugin = action.data && action.data.plugin;
|
||||
const viewportIndex = useActiveViewport
|
||||
? state.activeViewportIndex
|
||||
: action.viewportIndex;
|
||||
currentData = cloneDeep(state.viewportSpecificData[viewportIndex]) || {};
|
||||
viewportSpecificData = cloneDeep(state.viewportSpecificData);
|
||||
viewportSpecificData[viewportIndex] = merge({}, currentData, action.data);
|
||||
const { dom } = state.viewportSpecificData[viewportIndex];
|
||||
|
||||
return Object.assign({}, state, { viewportSpecificData });
|
||||
viewportSpecificData = cloneDeep(state.viewportSpecificData);
|
||||
viewportSpecificData[viewportIndex] = {
|
||||
dom,
|
||||
...action.data,
|
||||
};
|
||||
|
||||
if (hasPlugin) {
|
||||
layout.viewports[viewportIndex].plugin = action.data.plugin;
|
||||
}
|
||||
|
||||
return Object.assign({}, state, { layout, viewportSpecificData });
|
||||
}
|
||||
case CLEAR_VIEWPORT:
|
||||
viewportSpecificData = cloneDeep(state.viewportSpecificData);
|
||||
|
||||
@@ -0,0 +1,49 @@
|
||||
import log from './../log.js';
|
||||
|
||||
export default class ServicesManager {
|
||||
constructor() {
|
||||
this.services = {};
|
||||
this.registeredServiceNames = [];
|
||||
}
|
||||
|
||||
/**
|
||||
*
|
||||
* @param {Object} service
|
||||
*/
|
||||
registerService(service) {
|
||||
if (!service) {
|
||||
log.warn(
|
||||
'Attempting to register a null/undefined service. Exiting early.'
|
||||
);
|
||||
return;
|
||||
}
|
||||
|
||||
let serviceName = service.name;
|
||||
|
||||
if (!serviceName) {
|
||||
log.warn(`Service name not set. Exiting early.`);
|
||||
return;
|
||||
}
|
||||
|
||||
if (this.registeredServiceNames.includes(serviceName)) {
|
||||
log.warn(
|
||||
`Extension name ${serviceName} has already been registered. Exiting before duplicating services.`
|
||||
);
|
||||
return;
|
||||
}
|
||||
|
||||
this.services[service.name] = service;
|
||||
|
||||
// Track service registration
|
||||
this.registeredServiceNames.push(serviceName);
|
||||
}
|
||||
|
||||
/**
|
||||
* An array of services.
|
||||
*
|
||||
* @param {Object[]} services - Array of services
|
||||
*/
|
||||
registerServices(services) {
|
||||
services.forEach(service => this.registerService(service));
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,70 @@
|
||||
import ServicesManager from './ServicesManager.js';
|
||||
import log from '../log.js';
|
||||
|
||||
jest.mock('./../log.js');
|
||||
|
||||
describe('ServicesManager.js', () => {
|
||||
let servicesManager;
|
||||
|
||||
beforeEach(() => {
|
||||
servicesManager = new ServicesManager();
|
||||
log.warn.mockClear();
|
||||
jest.clearAllMocks();
|
||||
});
|
||||
|
||||
describe('registerServices()', () => {
|
||||
it('calls registerService() for each service', () => {
|
||||
servicesManager.registerService = jest.fn();
|
||||
|
||||
const fakeServices = [
|
||||
{ name: 'UINotificationTestService', hide: jest.fn() },
|
||||
{ name: 'UIModalTestService', hide: jest.fn() },
|
||||
];
|
||||
|
||||
servicesManager.registerServices(fakeServices);
|
||||
|
||||
expect(servicesManager.registerService.mock.calls.length).toBe(2);
|
||||
});
|
||||
});
|
||||
|
||||
describe('registerService()', () => {
|
||||
it('logs a warning if the service is null or undefined', () => {
|
||||
const undefinedService = undefined;
|
||||
const nullService = null;
|
||||
|
||||
servicesManager.registerService(undefinedService);
|
||||
servicesManager.registerService(nullService);
|
||||
|
||||
expect(log.warn.mock.calls.length).toBe(2);
|
||||
});
|
||||
|
||||
it('logs a warning if the service does not have a name', () => {
|
||||
const serviceWithEmptyName = { name: '', hide: jest.fn() };
|
||||
const serviceWithoutName = { hide: jest.fn() };
|
||||
|
||||
servicesManager.registerService(serviceWithEmptyName);
|
||||
servicesManager.registerService(serviceWithoutName);
|
||||
|
||||
expect(log.warn.mock.calls.length).toBe(2);
|
||||
});
|
||||
|
||||
it('tracks which services have been registered', () => {
|
||||
const service = {
|
||||
name: 'UINotificationService',
|
||||
};
|
||||
|
||||
servicesManager.registerService(service);
|
||||
|
||||
expect(servicesManager.registeredServiceNames).toContain(service.name);
|
||||
});
|
||||
|
||||
it('logs a warning if the service has an name that has already been registered', () => {
|
||||
const service = { name: 'UINotificationService' };
|
||||
|
||||
servicesManager.registerService(service);
|
||||
servicesManager.registerService(service);
|
||||
|
||||
expect(log.warn.mock.calls.length).toBe(1);
|
||||
});
|
||||
});
|
||||
});
|
||||
@@ -0,0 +1,88 @@
|
||||
/**
|
||||
* A UI Element
|
||||
*
|
||||
* @typedef {ReactElement|HTMLElement} Modal
|
||||
*/
|
||||
|
||||
/**
|
||||
* UI Modal
|
||||
*
|
||||
* @typedef {Object} ModalProps
|
||||
* @property {string} [header=null] -
|
||||
* @property {string} [footer=null] -
|
||||
* @property {string} [backdrop=false] -
|
||||
* @property {string} [keyboard=false] -
|
||||
* @property {number} [show=true] -
|
||||
* @property {string} [closeButton=true] -
|
||||
* @property {string} [title=null] - 'Modal Title'
|
||||
* @property {boolean} [customClassName=null] - '.ModalClass'
|
||||
*/
|
||||
|
||||
const uiModalServicePublicAPI = {
|
||||
name: 'UIModalService',
|
||||
hide,
|
||||
show,
|
||||
setServiceImplementation,
|
||||
};
|
||||
|
||||
const uiModalServiceImplementation = {
|
||||
_hide: () => console.warn('hide() NOT IMPLEMENTED'),
|
||||
_show: () => console.warn('show() NOT IMPLEMENTED'),
|
||||
};
|
||||
|
||||
function createUIModalService() {
|
||||
return uiModalServicePublicAPI;
|
||||
}
|
||||
|
||||
/**
|
||||
* Show a new UI modal;
|
||||
*
|
||||
* @param {Modal} component React component
|
||||
* @param {ModalProps} props { header, footer, backdrop, keyboard, show, closeButton, title, customClassName }
|
||||
*/
|
||||
function show(
|
||||
component,
|
||||
props = {
|
||||
header: null,
|
||||
footer: null,
|
||||
backdrop: false,
|
||||
keyboard: false,
|
||||
show: true,
|
||||
closeButton: true,
|
||||
title: null,
|
||||
customClassName: null,
|
||||
}
|
||||
) {
|
||||
return uiModalServiceImplementation._show(component, props);
|
||||
}
|
||||
|
||||
/**
|
||||
* Hides/dismisses the modal, if currently shown
|
||||
*
|
||||
* @returns void
|
||||
*/
|
||||
function hide() {
|
||||
return uiModalServiceImplementation._hide();
|
||||
}
|
||||
|
||||
/**
|
||||
*
|
||||
*
|
||||
* @param {*} {
|
||||
* hide: hideImplementation,
|
||||
* show: showImplementation,
|
||||
* }
|
||||
*/
|
||||
function setServiceImplementation({
|
||||
hide: hideImplementation,
|
||||
show: showImplementation,
|
||||
}) {
|
||||
if (hideImplementation) {
|
||||
uiModalServiceImplementation._hide = hideImplementation;
|
||||
}
|
||||
if (showImplementation) {
|
||||
uiModalServiceImplementation._show = showImplementation;
|
||||
}
|
||||
}
|
||||
|
||||
export default createUIModalService;
|
||||
@@ -0,0 +1,84 @@
|
||||
/**
|
||||
* A UI Notification
|
||||
*
|
||||
* @typedef {Object} Notification
|
||||
* @property {string} title -
|
||||
* @property {string} message -
|
||||
* @property {number} [duration=5000] - in ms
|
||||
* @property {string} [position="bottomRight"] -"topLeft" | "topCenter | "topRight" | "bottomLeft" | "bottomCenter" | "bottomRight"
|
||||
* @property {string} [type="info"] - "info" | "error" | "warning" | "success"
|
||||
* @property {boolean} [autoClose=true]
|
||||
*/
|
||||
|
||||
const uiNotificationServicePublicAPI = {
|
||||
name: 'UINotificationService',
|
||||
hide,
|
||||
show,
|
||||
setServiceImplementation,
|
||||
};
|
||||
|
||||
const uiNotificationServiceImplementation = {
|
||||
_hide: () => console.warn('hide() NOT IMPLEMENTED'),
|
||||
_show: () => console.warn('show() NOT IMPLEMENTED'),
|
||||
};
|
||||
|
||||
function createUINotificationService() {
|
||||
return uiNotificationServicePublicAPI;
|
||||
}
|
||||
|
||||
/**
|
||||
* Create and show a new UI notification; returns the
|
||||
* ID of the created notification.
|
||||
*
|
||||
* @param {Notification} notification { title, message, duration, position, type, autoClose}
|
||||
* @returns {number} id
|
||||
*/
|
||||
function show({
|
||||
title,
|
||||
message,
|
||||
duration = 5000,
|
||||
position = 'bottomRight',
|
||||
type = 'info',
|
||||
autoClose = true,
|
||||
}) {
|
||||
return uiNotificationServiceImplementation._show({
|
||||
title,
|
||||
message,
|
||||
duration,
|
||||
position,
|
||||
type,
|
||||
autoClose,
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Hides/dismisses the notification, if currently shown
|
||||
*
|
||||
* @param {number} id - id of the notification to hide/dismiss
|
||||
* @returns undefined
|
||||
*/
|
||||
function hide(id) {
|
||||
return uiNotificationServiceImplementation._hide({ id });
|
||||
}
|
||||
|
||||
/**
|
||||
*
|
||||
*
|
||||
* @param {*} {
|
||||
* hide: hideImplementation,
|
||||
* show: showImplementation,
|
||||
* }
|
||||
*/
|
||||
function setServiceImplementation({
|
||||
hide: hideImplementation,
|
||||
show: showImplementation,
|
||||
}) {
|
||||
if (hideImplementation) {
|
||||
uiNotificationServiceImplementation._hide = hideImplementation;
|
||||
}
|
||||
if (showImplementation) {
|
||||
uiNotificationServiceImplementation._show = showImplementation;
|
||||
}
|
||||
}
|
||||
|
||||
export default createUINotificationService;
|
||||
@@ -0,0 +1,5 @@
|
||||
import ServicesManager from './ServicesManager.js';
|
||||
import createUINotificationService from './UINotificationService';
|
||||
import createUIModalService from './UIModalService';
|
||||
|
||||
export { createUINotificationService, createUIModalService, ServicesManager };
|
||||
@@ -0,0 +1,25 @@
|
||||
import DICOMWeb from '../DICOMWeb/';
|
||||
import isLowPriorityModality from '../utils/isLowPriorityModality';
|
||||
|
||||
const INFO = Symbol('INFO');
|
||||
|
||||
/**
|
||||
* Creates an object with processed series information and saves its reference
|
||||
* inside the series object itself.
|
||||
* @param {Object} series The raw series object
|
||||
* @returns {Object} object containing some useful info from given series
|
||||
*/
|
||||
export default function getSeriesInfo(series) {
|
||||
let info = series[INFO];
|
||||
if (!info) {
|
||||
const modality = DICOMWeb.getString(series['00080060'], '').toUpperCase();
|
||||
info = Object.freeze({
|
||||
modality,
|
||||
isLowPriority: isLowPriorityModality(modality),
|
||||
seriesInstanceUid: DICOMWeb.getString(series['0020000E']),
|
||||
seriesNumber: DICOMWeb.getNumber(series['00200011'], 0) || 0,
|
||||
});
|
||||
series[INFO] = info;
|
||||
}
|
||||
return info;
|
||||
}
|
||||
@@ -7,13 +7,16 @@ import { retrieveStudyMetadata } from './retrieveStudyMetadata';
|
||||
* This function calls retrieveStudyMetadata several times, asynchronously,
|
||||
* and waits for all of the results to be returned.
|
||||
*
|
||||
* @param studyInstanceUids The UIDs of the Studies to be retrieved
|
||||
* @return Promise
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {Array} studyInstanceUids The UIDs of the Studies to be retrieved
|
||||
* @param {Object} [filters] - Object containing filters to be applied on retrieve metadata process
|
||||
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
|
||||
* @returns {Promise} that will be resolved with the metadata or rejected with the error
|
||||
*/
|
||||
export default function retrieveStudiesMetadata(
|
||||
server,
|
||||
studyInstanceUids,
|
||||
seriesInstanceUids
|
||||
filters
|
||||
) {
|
||||
// Create an empty array to store the Promises for each metaData retrieval call
|
||||
const promises = [];
|
||||
@@ -21,11 +24,7 @@ export default function retrieveStudiesMetadata(
|
||||
// Loop through the array of studyInstanceUids
|
||||
studyInstanceUids.forEach(function(studyInstanceUid) {
|
||||
// Send the call and resolve or reject the related promise based on its outcome
|
||||
const promise = retrieveStudyMetadata(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUids
|
||||
);
|
||||
const promise = retrieveStudyMetadata(server, studyInstanceUid, filters);
|
||||
|
||||
// Add the current promise to the array of promises
|
||||
promises.push(promise);
|
||||
|
||||
@@ -7,11 +7,13 @@ const StudyMetaDataPromises = new Map();
|
||||
/**
|
||||
* Retrieves study metadata
|
||||
*
|
||||
* @param {Object} server
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {string} studyInstanceUid The UID of the Study to be retrieved
|
||||
* @param {Object} [filters] - Object containing filters to be applied on retrieve metadata process
|
||||
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
|
||||
* @returns {Promise} that will be resolved with the metadata or rejected with the error
|
||||
*/
|
||||
export function retrieveStudyMetadata(server, studyInstanceUid) {
|
||||
export function retrieveStudyMetadata(server, studyInstanceUid, filters) {
|
||||
// @TODO: Whenever a study metadata request has failed, its related promise will be rejected once and for all
|
||||
// and further requests for that metadata will always fail. On failure, we probably need to remove the
|
||||
// corresponding promise from the "StudyMetaDataPromises" map...
|
||||
@@ -32,7 +34,7 @@ export function retrieveStudyMetadata(server, studyInstanceUid) {
|
||||
|
||||
// Create a promise to handle the data retrieval
|
||||
const promise = new Promise((resolve, reject) => {
|
||||
RetrieveMetadata(server, studyInstanceUid).then(function(data) {
|
||||
RetrieveMetadata(server, studyInstanceUid, filters).then(function(data) {
|
||||
resolve(data);
|
||||
}, reject);
|
||||
});
|
||||
|
||||
@@ -30,7 +30,7 @@ function dateToString(date) {
|
||||
function getQIDOQueryParams(filter, serverSupportsQIDOIncludeField) {
|
||||
const commaSeparatedFields = [
|
||||
'00081030', // Study Description
|
||||
'00080060', //Modality
|
||||
'00080060', // Modality
|
||||
// Add more fields here if you want them in the result
|
||||
].join(',');
|
||||
|
||||
|
||||
@@ -1,609 +1,30 @@
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
import isLowPriorityModality from '../../../utils/isLowPriorityModality';
|
||||
|
||||
const INFO = Symbol('INFO');
|
||||
|
||||
const WADOProxy = {
|
||||
convertURL: (url, server) => {
|
||||
// TODO: Remove all WADOProxy stuff from this file
|
||||
return url;
|
||||
},
|
||||
};
|
||||
|
||||
function parseFloatArray(obj) {
|
||||
const result = [];
|
||||
|
||||
if (!obj) {
|
||||
return result;
|
||||
}
|
||||
|
||||
const objs = obj.split('\\');
|
||||
for (let i = 0; i < objs.length; i++) {
|
||||
result.push(parseFloat(objs[i]));
|
||||
}
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
/**
|
||||
* Simple cache schema for retrieved color palettes.
|
||||
*/
|
||||
const paletteColorCache = {
|
||||
count: 0,
|
||||
maxAge: 24 * 60 * 60 * 1000, // 24h cache?
|
||||
entries: {},
|
||||
isValidUID: function(paletteUID) {
|
||||
return typeof paletteUID === 'string' && paletteUID.length > 0;
|
||||
},
|
||||
get: function(paletteUID) {
|
||||
let entry = null;
|
||||
if (this.entries.hasOwnProperty(paletteUID)) {
|
||||
entry = this.entries[paletteUID];
|
||||
// check how the entry is...
|
||||
if (Date.now() - entry.time > this.maxAge) {
|
||||
// entry is too old... remove entry.
|
||||
delete this.entries[paletteUID];
|
||||
this.count--;
|
||||
entry = null;
|
||||
}
|
||||
}
|
||||
return entry;
|
||||
},
|
||||
add: function(entry) {
|
||||
if (this.isValidUID(entry.uid)) {
|
||||
let paletteUID = entry.uid;
|
||||
if (this.entries.hasOwnProperty(paletteUID) !== true) {
|
||||
this.count++; // increment cache entry count...
|
||||
}
|
||||
entry.time = Date.now();
|
||||
this.entries[paletteUID] = entry;
|
||||
// @TODO: Add logic to get rid of old entries and reduce memory usage...
|
||||
}
|
||||
},
|
||||
};
|
||||
|
||||
/** Returns a WADO url for an instance
|
||||
*
|
||||
* @param studyInstanceUid
|
||||
* @param seriesInstanceUid
|
||||
* @param sopInstanceUid
|
||||
* @returns {string}
|
||||
*/
|
||||
function buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
) {
|
||||
// TODO: This can be removed, since DICOMWebClient has the same function. Not urgent, though
|
||||
const params = [];
|
||||
|
||||
params.push('requestType=WADO');
|
||||
params.push(`studyUID=${studyInstanceUid}`);
|
||||
params.push(`seriesUID=${seriesInstanceUid}`);
|
||||
params.push(`objectUID=${sopInstanceUid}`);
|
||||
params.push('contentType=application/dicom');
|
||||
params.push('transferSyntax=*');
|
||||
|
||||
const paramString = params.join('&');
|
||||
|
||||
return `${server.wadoUriRoot}?${paramString}`;
|
||||
}
|
||||
|
||||
function buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
) {
|
||||
return `${server.wadoRoot}/studies/${studyInstanceUid}/series/${seriesInstanceUid}/instances/${sopInstanceUid}`;
|
||||
}
|
||||
|
||||
function buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid,
|
||||
frame
|
||||
) {
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
frame = frame != null || 1;
|
||||
|
||||
return `${baseWadoRsUri}/frames/${frame}`;
|
||||
}
|
||||
|
||||
/**
|
||||
* Parses the SourceImageSequence, if it exists, in order
|
||||
* to return a ReferenceSOPInstanceUID. The ReferenceSOPInstanceUID
|
||||
* is used to refer to this image in any accompanying DICOM-SR documents.
|
||||
*
|
||||
* @param instance
|
||||
* @returns {String} The ReferenceSOPInstanceUID
|
||||
*/
|
||||
function getSourceImageInstanceUid(instance) {
|
||||
// TODO= Parse the whole Source Image Sequence
|
||||
// This is a really poor workaround for now.
|
||||
// Later we should probably parse the whole sequence.
|
||||
var SourceImageSequence = instance['00082112'];
|
||||
if (
|
||||
SourceImageSequence &&
|
||||
SourceImageSequence.Value &&
|
||||
SourceImageSequence.Value.length &&
|
||||
SourceImageSequence.Value[0]['00081155'].Value
|
||||
) {
|
||||
return SourceImageSequence.Value[0]['00081155'].Value[0];
|
||||
}
|
||||
}
|
||||
|
||||
function getPaletteColor(server, instance, tag, lutDescriptor) {
|
||||
const numLutEntries = lutDescriptor[0];
|
||||
const bits = lutDescriptor[2];
|
||||
|
||||
let uri = WADOProxy.convertURL(instance[tag].BulkDataURI, server);
|
||||
|
||||
// TODO: Workaround for dcm4chee behind SSL-terminating proxy returning
|
||||
// incorrect bulk data URIs
|
||||
if (server.wadoRoot.indexOf('https') === 0 && !uri.includes('https')) {
|
||||
uri = uri.replace('http', 'https');
|
||||
}
|
||||
|
||||
const config = {
|
||||
url: server.wadoRoot, //BulkDataURI is absolute, so this isn't used
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const options = {
|
||||
BulkDataURI: uri,
|
||||
};
|
||||
|
||||
const readUInt16 = (byteArray, position) => {
|
||||
return byteArray[position] + byteArray[position + 1] * 256;
|
||||
};
|
||||
|
||||
const arrayBufferToPaletteColorLUT = result => {
|
||||
const arraybuffer = result[0];
|
||||
const byteArray = new Uint8Array(arraybuffer);
|
||||
const lut = [];
|
||||
|
||||
for (let i = 0; i < numLutEntries; i++) {
|
||||
if (bits === 16) {
|
||||
lut[i] = readUInt16(byteArray, i * 2);
|
||||
} else {
|
||||
lut[i] = byteArray[i];
|
||||
}
|
||||
}
|
||||
|
||||
return lut;
|
||||
};
|
||||
|
||||
return dicomWeb.retrieveBulkData(options).then(arrayBufferToPaletteColorLUT);
|
||||
}
|
||||
|
||||
/**
|
||||
* Fetch palette colors for instances with "PALETTE COLOR" photometricInterpretation.
|
||||
*
|
||||
* @param server {Object} Current server;
|
||||
* @param instance {Object} The retrieved instance metadata;
|
||||
* @returns {String} The ReferenceSOPInstanceUID
|
||||
*/
|
||||
async function getPaletteColors(server, instance, lutDescriptor) {
|
||||
let paletteUID = DICOMWeb.getString(instance['00281199']);
|
||||
|
||||
return new Promise((resolve, reject) => {
|
||||
let entry;
|
||||
if (paletteColorCache.isValidUID(paletteUID)) {
|
||||
entry = paletteColorCache.get(paletteUID);
|
||||
|
||||
if (entry) {
|
||||
return resolve(entry);
|
||||
}
|
||||
}
|
||||
|
||||
// no entry in cache... Fetch remote data.
|
||||
const r = getPaletteColor(server, instance, '00281201', lutDescriptor);
|
||||
const g = getPaletteColor(server, instance, '00281202', lutDescriptor);
|
||||
const b = getPaletteColor(server, instance, '00281203', lutDescriptor);
|
||||
|
||||
const promises = [r, g, b];
|
||||
|
||||
Promise.all(promises).then(args => {
|
||||
entry = {
|
||||
red: args[0],
|
||||
green: args[1],
|
||||
blue: args[2],
|
||||
};
|
||||
|
||||
// when paletteUID is present, the entry can be cached...
|
||||
entry.uid = paletteUID;
|
||||
paletteColorCache.add(entry);
|
||||
|
||||
resolve(entry);
|
||||
});
|
||||
});
|
||||
}
|
||||
|
||||
function getFrameIncrementPointer(element) {
|
||||
const frameIncrementPointerNames = {
|
||||
'00181065': 'frameTimeVector',
|
||||
'00181063': 'frameTime',
|
||||
};
|
||||
|
||||
if (!element || !element.Value || !element.Value.length) {
|
||||
return;
|
||||
}
|
||||
|
||||
const value = element.Value[0];
|
||||
return frameIncrementPointerNames[value];
|
||||
}
|
||||
|
||||
function getRadiopharmaceuticalInfo(instance) {
|
||||
const modality = DICOMWeb.getString(instance['00080060']);
|
||||
|
||||
if (modality !== 'PT') {
|
||||
return;
|
||||
}
|
||||
|
||||
const radiopharmaceuticalInfo = instance['00540016'];
|
||||
if (
|
||||
radiopharmaceuticalInfo === undefined ||
|
||||
!radiopharmaceuticalInfo.Value ||
|
||||
!radiopharmaceuticalInfo.Value.length
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
const firstPetRadiopharmaceuticalInfo = radiopharmaceuticalInfo.Value[0];
|
||||
return {
|
||||
radiopharmaceuticalStartTime: DICOMWeb.getString(
|
||||
firstPetRadiopharmaceuticalInfo['00181072']
|
||||
),
|
||||
radionuclideTotalDose: DICOMWeb.getNumber(
|
||||
firstPetRadiopharmaceuticalInfo['00181074']
|
||||
),
|
||||
radionuclideHalfLife: DICOMWeb.getNumber(
|
||||
firstPetRadiopharmaceuticalInfo['00181075']
|
||||
),
|
||||
};
|
||||
}
|
||||
|
||||
async function makeSOPInstance(server, study, instance) {
|
||||
const { studyInstanceUid } = study;
|
||||
const seriesInstanceUid = DICOMWeb.getString(instance['0020000E']);
|
||||
let series = study.seriesMap[seriesInstanceUid];
|
||||
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesInstanceUid,
|
||||
seriesDescription: DICOMWeb.getString(instance['0008103E']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
seriesNumber: DICOMWeb.getNumber(instance['00200011']),
|
||||
seriesDate: DICOMWeb.getString(instance['00080021']),
|
||||
seriesTime: DICOMWeb.getString(instance['00080031']),
|
||||
instances: [],
|
||||
};
|
||||
study.seriesMap[seriesInstanceUid] = series;
|
||||
study.seriesList.push(series);
|
||||
}
|
||||
|
||||
const sopInstanceUid = DICOMWeb.getString(instance['00080018']);
|
||||
const wadouri = buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const wadorsuri = buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
|
||||
const sopInstance = {
|
||||
imageType: DICOMWeb.getString(instance['00080008']),
|
||||
sopClassUid: DICOMWeb.getString(instance['00080016']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
sopInstanceUid,
|
||||
instanceNumber: DICOMWeb.getNumber(instance['00200013']),
|
||||
imagePositionPatient: DICOMWeb.getString(instance['00200032']),
|
||||
imageOrientationPatient: DICOMWeb.getString(instance['00200037']),
|
||||
frameOfReferenceUID: DICOMWeb.getString(instance['00200052']),
|
||||
sliceLocation: DICOMWeb.getNumber(instance['00201041']),
|
||||
samplesPerPixel: DICOMWeb.getNumber(instance['00280002']),
|
||||
photometricInterpretation: DICOMWeb.getString(instance['00280004']),
|
||||
planarConfiguration: DICOMWeb.getNumber(instance['00280006']),
|
||||
rows: DICOMWeb.getNumber(instance['00280010']),
|
||||
columns: DICOMWeb.getNumber(instance['00280011']),
|
||||
pixelSpacing: DICOMWeb.getString(instance['00280030']),
|
||||
pixelAspectRatio: DICOMWeb.getString(instance['00280034']),
|
||||
bitsAllocated: DICOMWeb.getNumber(instance['00280100']),
|
||||
bitsStored: DICOMWeb.getNumber(instance['00280101']),
|
||||
highBit: DICOMWeb.getNumber(instance['00280102']),
|
||||
pixelRepresentation: DICOMWeb.getNumber(instance['00280103']),
|
||||
smallestPixelValue: DICOMWeb.getNumber(instance['00280106']),
|
||||
largestPixelValue: DICOMWeb.getNumber(instance['00280107']),
|
||||
windowCenter: DICOMWeb.getString(instance['00281050']),
|
||||
windowWidth: DICOMWeb.getString(instance['00281051']),
|
||||
rescaleIntercept: DICOMWeb.getNumber(instance['00281052']),
|
||||
rescaleSlope: DICOMWeb.getNumber(instance['00281053']),
|
||||
rescaleType: DICOMWeb.getNumber(instance['00281054']),
|
||||
sourceImageInstanceUid: getSourceImageInstanceUid(instance),
|
||||
laterality: DICOMWeb.getString(instance['00200062']),
|
||||
viewPosition: DICOMWeb.getString(instance['00185101']),
|
||||
acquisitionDateTime: DICOMWeb.getString(instance['0008002A']),
|
||||
numberOfFrames: DICOMWeb.getNumber(instance['00280008']),
|
||||
frameIncrementPointer: getFrameIncrementPointer(instance['00280009']),
|
||||
frameTime: DICOMWeb.getNumber(instance['00181063']),
|
||||
frameTimeVector: parseFloatArray(DICOMWeb.getString(instance['00181065'])),
|
||||
sliceThickness: DICOMWeb.getNumber(instance['00180050']),
|
||||
spacingBetweenSlices: DICOMWeb.getString(instance['00180088']),
|
||||
lossyImageCompression: DICOMWeb.getString(instance['00282110']),
|
||||
derivationDescription: DICOMWeb.getString(instance['00282111']),
|
||||
lossyImageCompressionRatio: DICOMWeb.getString(instance['00282112']),
|
||||
lossyImageCompressionMethod: DICOMWeb.getString(instance['00282114']),
|
||||
echoNumber: DICOMWeb.getString(instance['00180086']),
|
||||
contrastBolusAgent: DICOMWeb.getString(instance['00180010']),
|
||||
radiopharmaceuticalInfo: getRadiopharmaceuticalInfo(instance),
|
||||
baseWadoRsUri: baseWadoRsUri,
|
||||
wadouri: WADOProxy.convertURL(wadouri, server),
|
||||
wadorsuri: WADOProxy.convertURL(wadorsuri, server),
|
||||
wadoRoot: server.wadoRoot,
|
||||
imageRendering: server.imageRendering,
|
||||
thumbnailRendering: server.thumbnailRendering,
|
||||
};
|
||||
|
||||
// Get additional information if the instance uses "PALETTE COLOR" photometric interpretation
|
||||
if (sopInstance.photometricInterpretation === 'PALETTE COLOR') {
|
||||
const redPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281101'])
|
||||
);
|
||||
const greenPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281102'])
|
||||
);
|
||||
const bluePaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281103'])
|
||||
);
|
||||
const palettes = await getPaletteColors(
|
||||
server,
|
||||
instance,
|
||||
redPaletteColorLookupTableDescriptor
|
||||
);
|
||||
|
||||
if (palettes) {
|
||||
if (palettes.uid) {
|
||||
sopInstance.paletteColorLookupTableUID = palettes.uid;
|
||||
}
|
||||
|
||||
sopInstance.redPaletteColorLookupTableData = palettes.red;
|
||||
sopInstance.greenPaletteColorLookupTableData = palettes.green;
|
||||
sopInstance.bluePaletteColorLookupTableData = palettes.blue;
|
||||
sopInstance.redPaletteColorLookupTableDescriptor = redPaletteColorLookupTableDescriptor;
|
||||
sopInstance.greenPaletteColorLookupTableDescriptor = greenPaletteColorLookupTableDescriptor;
|
||||
sopInstance.bluePaletteColorLookupTableDescriptor = bluePaletteColorLookupTableDescriptor;
|
||||
}
|
||||
}
|
||||
|
||||
series.instances.push(sopInstance);
|
||||
return sopInstance;
|
||||
}
|
||||
|
||||
/**
|
||||
* Create a plain JS object that describes a study (a study descriptor object)
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Object} aSopInstance a SOP Instance from which study information will be added
|
||||
*/
|
||||
function createStudy(server, aSopInstance) {
|
||||
// TODO: Pass a reference ID to the server instead of including the URLs here
|
||||
return {
|
||||
seriesList: [],
|
||||
seriesMap: Object.create(null),
|
||||
seriesLoader: null,
|
||||
wadoUriRoot: server.wadoUriRoot,
|
||||
wadoRoot: server.wadoRoot,
|
||||
qidoRoot: server.qidoRoot,
|
||||
patientName: DICOMWeb.getName(aSopInstance['00100010']),
|
||||
patientId: DICOMWeb.getString(aSopInstance['00100020']),
|
||||
patientAge: DICOMWeb.getNumber(aSopInstance['00101010']),
|
||||
patientSize: DICOMWeb.getNumber(aSopInstance['00101020']),
|
||||
patientWeight: DICOMWeb.getNumber(aSopInstance['00101030']),
|
||||
accessionNumber: DICOMWeb.getString(aSopInstance['00080050']),
|
||||
studyDate: DICOMWeb.getString(aSopInstance['00080020']),
|
||||
modalities: DICOMWeb.getString(aSopInstance['00080061']),
|
||||
studyDescription: DICOMWeb.getString(aSopInstance['00081030']),
|
||||
imageCount: DICOMWeb.getString(aSopInstance['00201208']),
|
||||
studyInstanceUid: DICOMWeb.getString(aSopInstance['0020000D']),
|
||||
institutionName: DICOMWeb.getString(aSopInstance['00080080']),
|
||||
};
|
||||
}
|
||||
|
||||
/**
|
||||
* Add a list of SOP Instances to a given study object descriptor
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Object} study The study descriptor to which the given SOP instances will be added
|
||||
* @param {Array} sopInstanceList A list of SOP instance objects
|
||||
*/
|
||||
async function addInstancesToStudy(server, study, sopInstanceList) {
|
||||
return Promise.all(
|
||||
sopInstanceList.map(function(sopInstance) {
|
||||
return makeSOPInstance(server, study, sopInstance);
|
||||
})
|
||||
);
|
||||
}
|
||||
|
||||
/**
|
||||
* Parses result data from a WADO search into Study MetaData
|
||||
* Returns an object populated with study metadata, including the
|
||||
* series list.
|
||||
*
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Array} sopInstanceList List of SOP Instances that build up to the study
|
||||
* @resolves {{seriesList: Array, patientName: *, patientId: *, accessionNumber: *, studyDate: *, modalities: *, studyDescription: *, imageCount: *, studyInstanceUid: *}}
|
||||
*/
|
||||
async function createStudyFromSOPInstanceList(server, sopInstanceList) {
|
||||
if (Array.isArray(sopInstanceList) && sopInstanceList.length > 0) {
|
||||
const firstSopInstance = sopInstanceList[0];
|
||||
const study = createStudy(server, firstSopInstance);
|
||||
await addInstancesToStudy(server, study, sopInstanceList);
|
||||
return study;
|
||||
}
|
||||
throw new Error('Failed to create study out of provided SOP instance list');
|
||||
}
|
||||
import RetrieveMetadataLoaderSync from './retrieveMetadataLoaderSync';
|
||||
import RetrieveMetadataLoaderAsync from './retrieveMetadataLoaderAsync';
|
||||
|
||||
/**
|
||||
* Retrieve Study metadata from a DICOM server. If the server is configured to use lazy load, only the first series
|
||||
* will be loaded and the property "studyLoader" will be set to let consumer load remaining series as needed
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* will be loaded and the property "studyLoader" will be set to let consumer load remaining series as needed.
|
||||
*
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {string} studyInstanceUid The Study Instance UID of the study which needs to be loaded
|
||||
* @param {Object} [filters] - Object containing filters to be applied on retrieve metadata process
|
||||
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
|
||||
* @returns {Object} A study descriptor object
|
||||
*/
|
||||
async function RetrieveMetadata(server, studyInstanceUid) {
|
||||
return (server.enableStudyLazyLoad !== false
|
||||
? lazyLoadStudyMetadata
|
||||
: loadStudyMetadata)(server, studyInstanceUid);
|
||||
}
|
||||
async function RetrieveMetadata(server, studyInstanceUid, filters = {}) {
|
||||
const RetrieveMetadataLoader =
|
||||
server.enableStudyLazyLoad !== false
|
||||
? RetrieveMetadataLoaderAsync
|
||||
: RetrieveMetadataLoaderSync;
|
||||
|
||||
/**
|
||||
*
|
||||
* @param {*} server
|
||||
* @param {*} studyInstanceUID
|
||||
*/
|
||||
async function loadStudyMetadata(server, studyInstanceUID) {
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
return dicomWeb
|
||||
.retrieveStudyMetadata({ studyInstanceUID })
|
||||
.then(result => createStudyFromSOPInstanceList(server, result));
|
||||
}
|
||||
|
||||
async function lazyLoadStudyMetadata(server, studyInstanceUid) {
|
||||
const seriesInstanceUids = await searchStudySeries(server, studyInstanceUid);
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
const seriesLoader = makeSeriesLoader(
|
||||
dicomWeb,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUids
|
||||
);
|
||||
const firstSeries = await seriesLoader.next();
|
||||
const study = await createStudyFromSOPInstanceList(
|
||||
const retrieveMetadataLoader = new RetrieveMetadataLoader(
|
||||
server,
|
||||
firstSeries.sopInstances
|
||||
studyInstanceUid,
|
||||
filters
|
||||
);
|
||||
if (seriesLoader.hasNext()) {
|
||||
attachSeriesLoader(server, study, seriesLoader);
|
||||
}
|
||||
return study;
|
||||
}
|
||||
const studyMetadata = retrieveMetadataLoader.execLoad();
|
||||
|
||||
function attachSeriesLoader(server, study, seriesLoader) {
|
||||
study.seriesLoader = Object.freeze({
|
||||
hasNext() {
|
||||
return seriesLoader.hasNext();
|
||||
},
|
||||
async next() {
|
||||
const series = await seriesLoader.next();
|
||||
await addInstancesToStudy(server, study, series.sopInstances);
|
||||
return study.seriesMap[series.seriesInstanceUID];
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates an immutable series loader object which loads each series sequentially using the iterator interface
|
||||
* @param {DICOMWebClient} dicomWebClient The DICOMWebClient instance to be used for series load
|
||||
* @param {string} studyInstanceUID The Study Instance UID from which series will be loaded
|
||||
* @param {Array} seriesInstanceUIDList A list of Series Instance UIDs
|
||||
* @returns {Object} Returns an object which supports loading of instances from each of given Series Instance UID
|
||||
*/
|
||||
function makeSeriesLoader(
|
||||
dicomWebClient,
|
||||
studyInstanceUID,
|
||||
seriesInstanceUIDList
|
||||
) {
|
||||
return Object.freeze({
|
||||
hasNext() {
|
||||
return seriesInstanceUIDList.length > 0;
|
||||
},
|
||||
async next() {
|
||||
const seriesInstanceUID = seriesInstanceUIDList.shift();
|
||||
const sopInstances = await dicomWebClient.retrieveSeriesMetadata({
|
||||
studyInstanceUID,
|
||||
seriesInstanceUID,
|
||||
});
|
||||
return { studyInstanceUID, seriesInstanceUID, sopInstances };
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Search series of a given study
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {string} studyInstanceUID The Study Instance UID to search series from;
|
||||
* @returns {Arrays} A list of Series Instance UIDs
|
||||
*/
|
||||
async function searchStudySeries(server, studyInstanceUID) {
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
const seriesList = await dicomWeb.searchForSeries({ studyInstanceUID });
|
||||
return seriesList
|
||||
.sort(seriesSortingCriteria)
|
||||
.map(series => getSeriesInfo(series).seriesInstanceUid);
|
||||
}
|
||||
|
||||
/**
|
||||
* Series sorting criteria: series considered low priority are moved to the end
|
||||
* of the list and series number is used to break ties
|
||||
* @param {Object} firstSeries
|
||||
* @param {Object} secondSeries
|
||||
*/
|
||||
function seriesSortingCriteria(firstSeries, secondSeries) {
|
||||
const a = getSeriesInfo(firstSeries);
|
||||
const b = getSeriesInfo(secondSeries);
|
||||
if (!a.isLowPriority && b.isLowPriority) {
|
||||
return -1;
|
||||
}
|
||||
if (a.isLowPriority && !b.isLowPriority) {
|
||||
return 1;
|
||||
}
|
||||
return a.seriesNumber - b.seriesNumber;
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates an object with processed series information and saves its reference
|
||||
* inside the series object itself to simplify sorting
|
||||
* @param {Object} series The raw series object
|
||||
*/
|
||||
function getSeriesInfo(series) {
|
||||
let info = series[INFO];
|
||||
if (!info) {
|
||||
const modality = DICOMWeb.getString(series['00080060'], '').toUpperCase();
|
||||
info = Object.freeze({
|
||||
modality,
|
||||
isLowPriority: isLowPriorityModality(modality),
|
||||
seriesInstanceUid: DICOMWeb.getString(series['0020000E']),
|
||||
seriesNumber: DICOMWeb.getNumber(series['00200011'], 0) || 0,
|
||||
});
|
||||
series[INFO] = info;
|
||||
}
|
||||
return info;
|
||||
return studyMetadata;
|
||||
}
|
||||
|
||||
export default RetrieveMetadata;
|
||||
@@ -0,0 +1,58 @@
|
||||
/**
|
||||
* Class to define inheritance of load retrieve strategy.
|
||||
* The process can be async load (lazy) or sync load
|
||||
*
|
||||
* There are methods that must be implemented at consumer level
|
||||
* To retrieve study call execLoad
|
||||
*/
|
||||
export default class RetrieveMetadataLoader {
|
||||
/**
|
||||
* @constructor
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {Array} studyInstanceUID Study instance ui to be retrieved
|
||||
* @param {Object} [filters] - Object containing filters to be applied on retrieve metadata process
|
||||
* @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
|
||||
*/
|
||||
constructor(server, studyInstanceUID, filters = {}) {
|
||||
this.server = server;
|
||||
this.studyInstanceUID = studyInstanceUID;
|
||||
this.filters = filters;
|
||||
}
|
||||
|
||||
async execLoad() {
|
||||
await this.configLoad();
|
||||
const preLoadData = await this.preLoad();
|
||||
const loadData = await this.load(preLoadData);
|
||||
const postLoadData = await this.posLoad(loadData);
|
||||
|
||||
return postLoadData;
|
||||
}
|
||||
|
||||
/**
|
||||
* It iterates over given loaders running each one. Loaders parameters must be bind when getting it.
|
||||
* @param {Array} loaders - array of loader to retrieve data.
|
||||
*/
|
||||
async runLoaders(loaders) {
|
||||
let result;
|
||||
for (const loader of loaders) {
|
||||
try {
|
||||
result = await loader();
|
||||
if (result && result.length) {
|
||||
break; // closes iterator in case data is retrieved successfully
|
||||
}
|
||||
} catch (e) {}
|
||||
}
|
||||
|
||||
if (loaders.next().done && !result) {
|
||||
throw 'cant find data';
|
||||
}
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
// Methods to be overwrite
|
||||
async configLoad() {}
|
||||
async preLoad() {}
|
||||
async load(preLoadData) {}
|
||||
async posLoad(loadData) {}
|
||||
}
|
||||
@@ -0,0 +1,145 @@
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
import RetrieveMetadataLoader from './retrieveMetadataLoader';
|
||||
import { sortStudySeries, sortingCriteria } from '../../sortStudy';
|
||||
import getSeriesInfo from '../../getSeriesInfo';
|
||||
import {
|
||||
createStudyFromSOPInstanceList,
|
||||
addInstancesToStudy,
|
||||
} from './studyInstanceHelpers';
|
||||
|
||||
/**
|
||||
* Map seriesList to an array of seriesInstanceUid
|
||||
* @param {Arrays} seriesList list of Series Instance UIDs
|
||||
* @returns {Arrays} A list of Series Instance UIDs
|
||||
*/
|
||||
function mapStudySeries(seriesList) {
|
||||
return seriesList.map(series => getSeriesInfo(series).seriesInstanceUid);
|
||||
}
|
||||
|
||||
function attachSeriesLoader(server, study, seriesLoader) {
|
||||
study.seriesLoader = Object.freeze({
|
||||
hasNext() {
|
||||
return seriesLoader.hasNext();
|
||||
},
|
||||
async next() {
|
||||
const series = await seriesLoader.next();
|
||||
await addInstancesToStudy(server, study, series.sopInstances);
|
||||
return study.seriesMap[series.seriesInstanceUID];
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates an immutable series loader object which loads each series sequentially using the iterator interface
|
||||
* @param {DICOMWebClient} dicomWebClient The DICOMWebClient instance to be used for series load
|
||||
* @param {string} studyInstanceUID The Study Instance UID from which series will be loaded
|
||||
* @param {Array} seriesInstanceUIDList A list of Series Instance UIDs
|
||||
* @returns {Object} Returns an object which supports loading of instances from each of given Series Instance UID
|
||||
*/
|
||||
function makeSeriesAsyncLoader(
|
||||
dicomWebClient,
|
||||
studyInstanceUID,
|
||||
seriesInstanceUIDList
|
||||
) {
|
||||
return Object.freeze({
|
||||
hasNext() {
|
||||
return seriesInstanceUIDList.length > 0;
|
||||
},
|
||||
async next() {
|
||||
const seriesInstanceUID = seriesInstanceUIDList.shift();
|
||||
const sopInstances = await dicomWebClient.retrieveSeriesMetadata({
|
||||
studyInstanceUID,
|
||||
seriesInstanceUID,
|
||||
});
|
||||
return { studyInstanceUID, seriesInstanceUID, sopInstances };
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Class for async load of study metadata.
|
||||
* It inherits from RetrieveMetadataLoader
|
||||
*
|
||||
* It loads the one series and then append to seriesLoader the others to be consumed/loaded
|
||||
*/
|
||||
export default class RetrieveMetadataLoaderAsync extends RetrieveMetadataLoader {
|
||||
configLoad() {
|
||||
const { server } = this;
|
||||
|
||||
const client = new api.DICOMwebClient({
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
|
||||
this.client = client;
|
||||
}
|
||||
|
||||
/**
|
||||
* @returns {Array} Array of preLoaders. To be consumed as queue
|
||||
*/
|
||||
*getPreLoaders() {
|
||||
const preLoaders = [];
|
||||
const {
|
||||
studyInstanceUID,
|
||||
filters: { seriesInstanceUID } = {},
|
||||
client,
|
||||
} = this;
|
||||
|
||||
if (seriesInstanceUID) {
|
||||
const options = {
|
||||
studyInstanceUID,
|
||||
queryParams: { SeriesInstanceUID: seriesInstanceUID },
|
||||
};
|
||||
preLoaders.push(client.searchForSeries.bind(client, options));
|
||||
}
|
||||
// Fallback preloader
|
||||
preLoaders.push(client.searchForSeries.bind(client, { studyInstanceUID }));
|
||||
|
||||
yield* preLoaders;
|
||||
}
|
||||
|
||||
async preLoad() {
|
||||
const preLoaders = this.getPreLoaders();
|
||||
const result = await this.runLoaders(preLoaders);
|
||||
|
||||
const seriesSorted = sortStudySeries(
|
||||
result,
|
||||
sortingCriteria.seriesSortCriteria.seriesInfoSortingCriteria
|
||||
);
|
||||
const seriesInstanceUidsMap = mapStudySeries(seriesSorted);
|
||||
|
||||
return seriesInstanceUidsMap;
|
||||
}
|
||||
|
||||
async load(preLoadData) {
|
||||
const { client, studyInstanceUID } = this;
|
||||
|
||||
const seriesAsyncLoader = makeSeriesAsyncLoader(
|
||||
client,
|
||||
studyInstanceUID,
|
||||
preLoadData
|
||||
);
|
||||
|
||||
const firstSeries = await seriesAsyncLoader.next();
|
||||
|
||||
return {
|
||||
sopInstances: firstSeries.sopInstances,
|
||||
asyncLoader: seriesAsyncLoader,
|
||||
};
|
||||
}
|
||||
|
||||
async posLoad(loadData) {
|
||||
const { server } = this;
|
||||
|
||||
const { sopInstances, asyncLoader } = loadData;
|
||||
|
||||
const study = await createStudyFromSOPInstanceList(server, sopInstances);
|
||||
|
||||
if (asyncLoader.hasNext()) {
|
||||
attachSeriesLoader(server, study, asyncLoader);
|
||||
}
|
||||
|
||||
return study;
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,76 @@
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
import { createStudyFromSOPInstanceList } from './studyInstanceHelpers';
|
||||
import RetrieveMetadataLoader from './retrieveMetadataLoader';
|
||||
|
||||
/**
|
||||
* Class for sync load of study metadata.
|
||||
* It inherits from RetrieveMetadataLoader
|
||||
*
|
||||
* A list of loaders (getLoaders) can be created so, it will be applied a fallback load strategy.
|
||||
* I.e Retrieve metadata using all loaders possibilities.
|
||||
*/
|
||||
export default class RetrieveMetadataLoaderSync extends RetrieveMetadataLoader {
|
||||
getOptions() {
|
||||
const { studyInstanceUID, filters } = this;
|
||||
|
||||
const options = {
|
||||
studyInstanceUID,
|
||||
};
|
||||
|
||||
const { seriesInstanceUID } = filters;
|
||||
if (seriesInstanceUID) {
|
||||
options['seriesInstanceUID'] = seriesInstanceUID;
|
||||
}
|
||||
|
||||
return options;
|
||||
}
|
||||
|
||||
/**
|
||||
* @returns {Array} Array of loaders. To be consumed as queue
|
||||
*/
|
||||
*getLoaders() {
|
||||
const loaders = [];
|
||||
const {
|
||||
studyInstanceUID,
|
||||
filters: { seriesInstanceUID } = {},
|
||||
client,
|
||||
} = this;
|
||||
|
||||
if (seriesInstanceUID) {
|
||||
loaders.push(
|
||||
client.retrieveSeriesMetadata.bind(client, {
|
||||
studyInstanceUID,
|
||||
seriesInstanceUID,
|
||||
})
|
||||
);
|
||||
}
|
||||
|
||||
loaders.push(
|
||||
client.retrieveStudyMetadata.bind(client, { studyInstanceUID })
|
||||
);
|
||||
|
||||
yield* loaders;
|
||||
}
|
||||
|
||||
configLoad() {
|
||||
const { server } = this;
|
||||
const client = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
|
||||
this.client = client;
|
||||
}
|
||||
|
||||
async load(preLoadData) {
|
||||
const loaders = this.getLoaders();
|
||||
const result = this.runLoaders(loaders);
|
||||
return result;
|
||||
}
|
||||
|
||||
async posLoad(loadData) {
|
||||
const { server } = this;
|
||||
return createStudyFromSOPInstanceList(server, loadData);
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,413 @@
|
||||
import DICOMWeb from '../../../DICOMWeb';
|
||||
|
||||
const WADOProxy = {
|
||||
convertURL: (url, server) => {
|
||||
// TODO: Remove all WADOProxy stuff from this file
|
||||
return url;
|
||||
},
|
||||
};
|
||||
function parseFloatArray(obj) {
|
||||
const result = [];
|
||||
|
||||
if (!obj) {
|
||||
return result;
|
||||
}
|
||||
|
||||
const objs = obj.split('\\');
|
||||
for (let i = 0; i < objs.length; i++) {
|
||||
result.push(parseFloat(objs[i]));
|
||||
}
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
/**
|
||||
* Create a plain JS object that describes a study (a study descriptor object)
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {Object} aSopInstance a SOP Instance from which study information will be added
|
||||
*/
|
||||
function createStudy(server, aSopInstance) {
|
||||
// TODO: Pass a reference ID to the server instead of including the URLs here
|
||||
return {
|
||||
seriesList: [],
|
||||
seriesMap: Object.create(null),
|
||||
seriesLoader: null,
|
||||
wadoUriRoot: server.wadoUriRoot,
|
||||
wadoRoot: server.wadoRoot,
|
||||
qidoRoot: server.qidoRoot,
|
||||
patientName: DICOMWeb.getName(aSopInstance['00100010']),
|
||||
patientId: DICOMWeb.getString(aSopInstance['00100020']),
|
||||
patientAge: DICOMWeb.getNumber(aSopInstance['00101010']),
|
||||
patientSize: DICOMWeb.getNumber(aSopInstance['00101020']),
|
||||
patientWeight: DICOMWeb.getNumber(aSopInstance['00101030']),
|
||||
accessionNumber: DICOMWeb.getString(aSopInstance['00080050']),
|
||||
studyDate: DICOMWeb.getString(aSopInstance['00080020']),
|
||||
modalities: DICOMWeb.getString(aSopInstance['00080061']),
|
||||
studyDescription: DICOMWeb.getString(aSopInstance['00081030']),
|
||||
imageCount: DICOMWeb.getString(aSopInstance['00201208']),
|
||||
studyInstanceUid: DICOMWeb.getString(aSopInstance['0020000D']),
|
||||
institutionName: DICOMWeb.getString(aSopInstance['00080080']),
|
||||
};
|
||||
}
|
||||
|
||||
/** Returns a WADO url for an instance
|
||||
*
|
||||
* @param studyInstanceUid
|
||||
* @param seriesInstanceUid
|
||||
* @param sopInstanceUid
|
||||
* @returns {string}
|
||||
*/
|
||||
function buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
) {
|
||||
// TODO: This can be removed, since DICOMWebClient has the same function. Not urgent, though
|
||||
const params = [];
|
||||
|
||||
params.push('requestType=WADO');
|
||||
params.push(`studyUID=${studyInstanceUid}`);
|
||||
params.push(`seriesUID=${seriesInstanceUid}`);
|
||||
params.push(`objectUID=${sopInstanceUid}`);
|
||||
params.push('contentType=application/dicom');
|
||||
params.push('transferSyntax=*');
|
||||
|
||||
const paramString = params.join('&');
|
||||
|
||||
return `${server.wadoUriRoot}?${paramString}`;
|
||||
}
|
||||
|
||||
function buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
) {
|
||||
return `${server.wadoRoot}/studies/${studyInstanceUid}/series/${seriesInstanceUid}/instances/${sopInstanceUid}`;
|
||||
}
|
||||
|
||||
function buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid,
|
||||
frame
|
||||
) {
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
frame = frame != null || 1;
|
||||
|
||||
return `${baseWadoRsUri}/frames/${frame}`;
|
||||
}
|
||||
|
||||
function getFrameIncrementPointer(element) {
|
||||
const frameIncrementPointerNames = {
|
||||
'00181065': 'frameTimeVector',
|
||||
'00181063': 'frameTime',
|
||||
};
|
||||
|
||||
if (!element || !element.Value || !element.Value.length) {
|
||||
return;
|
||||
}
|
||||
|
||||
const value = element.Value[0];
|
||||
return frameIncrementPointerNames[value];
|
||||
}
|
||||
|
||||
function getRadiopharmaceuticalInfo(instance) {
|
||||
const modality = DICOMWeb.getString(instance['00080060']);
|
||||
|
||||
if (modality !== 'PT') {
|
||||
return;
|
||||
}
|
||||
|
||||
const radiopharmaceuticalInfo = instance['00540016'];
|
||||
if (
|
||||
radiopharmaceuticalInfo === undefined ||
|
||||
!radiopharmaceuticalInfo.Value ||
|
||||
!radiopharmaceuticalInfo.Value.length
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
const firstPetRadiopharmaceuticalInfo = radiopharmaceuticalInfo.Value[0];
|
||||
return {
|
||||
radiopharmaceuticalStartTime: DICOMWeb.getString(
|
||||
firstPetRadiopharmaceuticalInfo['00181072']
|
||||
),
|
||||
radionuclideTotalDose: DICOMWeb.getNumber(
|
||||
firstPetRadiopharmaceuticalInfo['00181074']
|
||||
),
|
||||
radionuclideHalfLife: DICOMWeb.getNumber(
|
||||
firstPetRadiopharmaceuticalInfo['00181075']
|
||||
),
|
||||
};
|
||||
}
|
||||
|
||||
/**
|
||||
* Parses the SourceImageSequence, if it exists, in order
|
||||
* to return a ReferenceSOPInstanceUID. The ReferenceSOPInstanceUID
|
||||
* is used to refer to this image in any accompanying DICOM-SR documents.
|
||||
*
|
||||
* @param instance
|
||||
* @returns {String} The ReferenceSOPInstanceUID
|
||||
*/
|
||||
function getSourceImageInstanceUid(instance) {
|
||||
// TODO= Parse the whole Source Image Sequence
|
||||
// This is a really poor workaround for now.
|
||||
// Later we should probably parse the whole sequence.
|
||||
var SourceImageSequence = instance['00082112'];
|
||||
if (
|
||||
SourceImageSequence &&
|
||||
SourceImageSequence.Value &&
|
||||
SourceImageSequence.Value.length &&
|
||||
SourceImageSequence.Value[0]['00081155'].Value
|
||||
) {
|
||||
return SourceImageSequence.Value[0]['00081155'].Value[0];
|
||||
}
|
||||
}
|
||||
|
||||
async function makeSOPInstance(server, study, instance) {
|
||||
const { studyInstanceUid } = study;
|
||||
const seriesInstanceUid = DICOMWeb.getString(instance['0020000E']);
|
||||
let series = study.seriesMap[seriesInstanceUid];
|
||||
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesInstanceUid,
|
||||
seriesDescription: DICOMWeb.getString(instance['0008103E']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
seriesNumber: DICOMWeb.getNumber(instance['00200011']),
|
||||
seriesDate: DICOMWeb.getString(instance['00080021']),
|
||||
seriesTime: DICOMWeb.getString(instance['00080031']),
|
||||
instances: [],
|
||||
};
|
||||
study.seriesMap[seriesInstanceUid] = series;
|
||||
study.seriesList.push(series);
|
||||
}
|
||||
|
||||
const sopInstanceUid = DICOMWeb.getString(instance['00080018']);
|
||||
const wadouri = buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const wadorsuri = buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
|
||||
const sopInstance = {
|
||||
imageType: DICOMWeb.getString(instance['00080008']),
|
||||
sopClassUid: DICOMWeb.getString(instance['00080016']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
sopInstanceUid,
|
||||
instanceNumber: DICOMWeb.getNumber(instance['00200013']),
|
||||
imagePositionPatient: DICOMWeb.getString(instance['00200032']),
|
||||
imageOrientationPatient: DICOMWeb.getString(instance['00200037']),
|
||||
frameOfReferenceUID: DICOMWeb.getString(instance['00200052']),
|
||||
sliceLocation: DICOMWeb.getNumber(instance['00201041']),
|
||||
samplesPerPixel: DICOMWeb.getNumber(instance['00280002']),
|
||||
photometricInterpretation: DICOMWeb.getString(instance['00280004']),
|
||||
planarConfiguration: DICOMWeb.getNumber(instance['00280006']),
|
||||
rows: DICOMWeb.getNumber(instance['00280010']),
|
||||
columns: DICOMWeb.getNumber(instance['00280011']),
|
||||
pixelSpacing: DICOMWeb.getString(instance['00280030']),
|
||||
pixelAspectRatio: DICOMWeb.getString(instance['00280034']),
|
||||
bitsAllocated: DICOMWeb.getNumber(instance['00280100']),
|
||||
bitsStored: DICOMWeb.getNumber(instance['00280101']),
|
||||
highBit: DICOMWeb.getNumber(instance['00280102']),
|
||||
pixelRepresentation: DICOMWeb.getNumber(instance['00280103']),
|
||||
smallestPixelValue: DICOMWeb.getNumber(instance['00280106']),
|
||||
largestPixelValue: DICOMWeb.getNumber(instance['00280107']),
|
||||
windowCenter: DICOMWeb.getString(instance['00281050']),
|
||||
windowWidth: DICOMWeb.getString(instance['00281051']),
|
||||
rescaleIntercept: DICOMWeb.getNumber(instance['00281052']),
|
||||
rescaleSlope: DICOMWeb.getNumber(instance['00281053']),
|
||||
rescaleType: DICOMWeb.getNumber(instance['00281054']),
|
||||
sourceImageInstanceUid: getSourceImageInstanceUid(instance),
|
||||
laterality: DICOMWeb.getString(instance['00200062']),
|
||||
viewPosition: DICOMWeb.getString(instance['00185101']),
|
||||
acquisitionDateTime: DICOMWeb.getString(instance['0008002A']),
|
||||
numberOfFrames: DICOMWeb.getNumber(instance['00280008']),
|
||||
frameIncrementPointer: getFrameIncrementPointer(instance['00280009']),
|
||||
frameTime: DICOMWeb.getNumber(instance['00181063']),
|
||||
frameTimeVector: parseFloatArray(DICOMWeb.getString(instance['00181065'])),
|
||||
sliceThickness: DICOMWeb.getNumber(instance['00180050']),
|
||||
spacingBetweenSlices: DICOMWeb.getString(instance['00180088']),
|
||||
lossyImageCompression: DICOMWeb.getString(instance['00282110']),
|
||||
derivationDescription: DICOMWeb.getString(instance['00282111']),
|
||||
lossyImageCompressionRatio: DICOMWeb.getString(instance['00282112']),
|
||||
lossyImageCompressionMethod: DICOMWeb.getString(instance['00282114']),
|
||||
echoNumber: DICOMWeb.getString(instance['00180086']),
|
||||
contrastBolusAgent: DICOMWeb.getString(instance['00180010']),
|
||||
radiopharmaceuticalInfo: getRadiopharmaceuticalInfo(instance),
|
||||
baseWadoRsUri: baseWadoRsUri,
|
||||
wadouri: WADOProxy.convertURL(wadouri, server),
|
||||
wadorsuri: WADOProxy.convertURL(wadorsuri, server),
|
||||
wadoRoot: server.wadoRoot,
|
||||
imageRendering: server.imageRendering,
|
||||
thumbnailRendering: server.thumbnailRendering,
|
||||
};
|
||||
|
||||
// Get additional information if the instance uses "PALETTE COLOR" photometric interpretation
|
||||
if (sopInstance.photometricInterpretation === 'PALETTE COLOR') {
|
||||
const redPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281101'])
|
||||
);
|
||||
const greenPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281102'])
|
||||
);
|
||||
const bluePaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281103'])
|
||||
);
|
||||
const palettes = await getPaletteColors(
|
||||
server,
|
||||
instance,
|
||||
redPaletteColorLookupTableDescriptor
|
||||
);
|
||||
|
||||
if (palettes) {
|
||||
if (palettes.uid) {
|
||||
sopInstance.paletteColorLookupTableUID = palettes.uid;
|
||||
}
|
||||
|
||||
sopInstance.redPaletteColorLookupTableData = palettes.red;
|
||||
sopInstance.greenPaletteColorLookupTableData = palettes.green;
|
||||
sopInstance.bluePaletteColorLookupTableData = palettes.blue;
|
||||
sopInstance.redPaletteColorLookupTableDescriptor = redPaletteColorLookupTableDescriptor;
|
||||
sopInstance.greenPaletteColorLookupTableDescriptor = greenPaletteColorLookupTableDescriptor;
|
||||
sopInstance.bluePaletteColorLookupTableDescriptor = bluePaletteColorLookupTableDescriptor;
|
||||
}
|
||||
}
|
||||
|
||||
series.instances.push(sopInstance);
|
||||
return sopInstance;
|
||||
}
|
||||
|
||||
function getPaletteColor(server, instance, tag, lutDescriptor) {
|
||||
const numLutEntries = lutDescriptor[0];
|
||||
const bits = lutDescriptor[2];
|
||||
|
||||
let uri = WADOProxy.convertURL(instance[tag].BulkDataURI, server);
|
||||
|
||||
// TODO: Workaround for dcm4chee behind SSL-terminating proxy returning
|
||||
// incorrect bulk data URIs
|
||||
if (server.wadoRoot.indexOf('https') === 0 && !uri.includes('https')) {
|
||||
uri = uri.replace('http', 'https');
|
||||
}
|
||||
|
||||
const config = {
|
||||
url: server.wadoRoot, //BulkDataURI is absolute, so this isn't used
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const options = {
|
||||
BulkDataURI: uri,
|
||||
};
|
||||
|
||||
const readUInt16 = (byteArray, position) => {
|
||||
return byteArray[position] + byteArray[position + 1] * 256;
|
||||
};
|
||||
|
||||
const arrayBufferToPaletteColorLUT = result => {
|
||||
const arraybuffer = result[0];
|
||||
const byteArray = new Uint8Array(arraybuffer);
|
||||
const lut = [];
|
||||
|
||||
for (let i = 0; i < numLutEntries; i++) {
|
||||
if (bits === 16) {
|
||||
lut[i] = readUInt16(byteArray, i * 2);
|
||||
} else {
|
||||
lut[i] = byteArray[i];
|
||||
}
|
||||
}
|
||||
|
||||
return lut;
|
||||
};
|
||||
|
||||
return dicomWeb.retrieveBulkData(options).then(arrayBufferToPaletteColorLUT);
|
||||
}
|
||||
|
||||
/**
|
||||
* Fetch palette colors for instances with "PALETTE COLOR" photometricInterpretation.
|
||||
*
|
||||
* @param server {Object} Current server;
|
||||
* @param instance {Object} The retrieved instance metadata;
|
||||
* @returns {String} The ReferenceSOPInstanceUID
|
||||
*/
|
||||
async function getPaletteColors(server, instance, lutDescriptor) {
|
||||
let paletteUID = DICOMWeb.getString(instance['00281199']);
|
||||
|
||||
return new Promise((resolve, reject) => {
|
||||
let entry;
|
||||
if (paletteColorCache.isValidUID(paletteUID)) {
|
||||
entry = paletteColorCache.get(paletteUID);
|
||||
|
||||
if (entry) {
|
||||
return resolve(entry);
|
||||
}
|
||||
}
|
||||
|
||||
// no entry in cache... Fetch remote data.
|
||||
const r = getPaletteColor(server, instance, '00281201', lutDescriptor);
|
||||
const g = getPaletteColor(server, instance, '00281202', lutDescriptor);
|
||||
const b = getPaletteColor(server, instance, '00281203', lutDescriptor);
|
||||
|
||||
const promises = [r, g, b];
|
||||
|
||||
Promise.all(promises).then(args => {
|
||||
entry = {
|
||||
red: args[0],
|
||||
green: args[1],
|
||||
blue: args[2],
|
||||
};
|
||||
|
||||
// when paletteUID is present, the entry can be cached...
|
||||
entry.uid = paletteUID;
|
||||
paletteColorCache.add(entry);
|
||||
|
||||
resolve(entry);
|
||||
});
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Add a list of SOP Instances to a given study object descriptor
|
||||
* @param {Object} server Object with server configuration parameters
|
||||
* @param {Object} study The study descriptor to which the given SOP instances will be added
|
||||
* @param {Array} sopInstanceList A list of SOP instance objects
|
||||
*/
|
||||
async function addInstancesToStudy(server, study, sopInstanceList) {
|
||||
return Promise.all(
|
||||
sopInstanceList.map(function(sopInstance) {
|
||||
return makeSOPInstance(server, study, sopInstance);
|
||||
})
|
||||
);
|
||||
}
|
||||
|
||||
const createStudyFromSOPInstanceList = async (server, sopInstanceList) => {
|
||||
if (Array.isArray(sopInstanceList) && sopInstanceList.length > 0) {
|
||||
const firstSopInstance = sopInstanceList[0];
|
||||
const study = createStudy(server, firstSopInstance);
|
||||
await addInstancesToStudy(server, study, sopInstanceList);
|
||||
return study;
|
||||
}
|
||||
throw new Error('Failed to create study out of provided SOP instance list');
|
||||
};
|
||||
|
||||
export { createStudyFromSOPInstanceList, addInstancesToStudy };
|
||||
@@ -1,17 +1,96 @@
|
||||
import getSeriesInfo from './getSeriesInfo';
|
||||
|
||||
/**
|
||||
* Sorts the series and instances inside a study instance by their series
|
||||
* and instance numbers in ascending order.
|
||||
* Series sorting criteria: series considered low priority are moved to the end
|
||||
* of the list and series number is used to break ties
|
||||
* @param {Object} firstSeries
|
||||
* @param {Object} secondSeries
|
||||
*/
|
||||
function seriesInfoSortingCriteria(firstSeries, secondSeries) {
|
||||
const a = getSeriesInfo(firstSeries);
|
||||
const b = getSeriesInfo(secondSeries);
|
||||
if (!a.isLowPriority && b.isLowPriority) {
|
||||
return -1;
|
||||
}
|
||||
if (a.isLowPriority && !b.isLowPriority) {
|
||||
return 1;
|
||||
}
|
||||
return a.seriesNumber - b.seriesNumber;
|
||||
}
|
||||
|
||||
const seriesSortCriteria = {
|
||||
default: (a, b) => a.seriesNumber - b.seriesNumber,
|
||||
seriesInfoSortingCriteria,
|
||||
};
|
||||
|
||||
const instancesSortCriteria = {
|
||||
default: (a, b) => a.instanceNumber - b.instanceNumber,
|
||||
};
|
||||
|
||||
const sortingCriteria = {
|
||||
seriesSortCriteria,
|
||||
instancesSortCriteria,
|
||||
};
|
||||
|
||||
/**
|
||||
* Sorts given seriesList (given param is modified)
|
||||
* The default criteria is based on series number in ascending order.
|
||||
*
|
||||
* @param {Array} seriesList List of series
|
||||
* @param {function} seriesSortingCriteria method for sorting
|
||||
* @returns {Array} sorted seriesList object
|
||||
*/
|
||||
const sortStudySeries = (
|
||||
seriesList,
|
||||
seriesSortingCriteria = seriesSortCriteria.default
|
||||
) => {
|
||||
return seriesList.sort(seriesSortingCriteria);
|
||||
};
|
||||
|
||||
/**
|
||||
* Sorts given instancesList (given param is modified)
|
||||
* The default criteria is based on instance number in ascending order.
|
||||
*
|
||||
* @param {Array} instancesList List of series
|
||||
* @param {function} instancesSortingCriteria method for sorting
|
||||
* @returns {Array} sorted instancesList object
|
||||
*/
|
||||
const sortStudyInstances = (
|
||||
instancesList,
|
||||
instancesSortingCriteria = instancesSortCriteria.default
|
||||
) => {
|
||||
return instancesList.sort(instancesSortingCriteria);
|
||||
};
|
||||
|
||||
/**
|
||||
* Sorts the series and instances (by default) inside a study instance based on sortingCriteria (given param is modified)
|
||||
* The default criteria is based on series and instance numbers in ascending order.
|
||||
*
|
||||
* @param {Object} study The study instance
|
||||
* @param {boolean} [deepSort = true] to sort instance also
|
||||
* @param {function} [seriesSortingCriteria = seriesSortCriteria.default] method for sorting series
|
||||
* @param {function} [instancesSortingCriteria = instancesSortCriteria.default] method for sorting instances
|
||||
* @returns {Object} sorted study object
|
||||
*/
|
||||
export default function sortStudy(study) {
|
||||
export default function sortStudy(
|
||||
study,
|
||||
deepSort = true,
|
||||
seriesSortingCriteria = seriesSortCriteria.default,
|
||||
instancesSortingCriteria = instancesSortCriteria.default
|
||||
) {
|
||||
if (!study || !study.seriesList) {
|
||||
throw new Error('Insufficient study data was provided to sortStudy');
|
||||
}
|
||||
|
||||
study.seriesList.sort((a, b) => a.seriesNumber - b.seriesNumber);
|
||||
sortStudySeries(study.seriesList, seriesSortingCriteria);
|
||||
|
||||
study.seriesList.forEach(series => {
|
||||
series.instances.sort((a, b) => a.instanceNumber - b.instanceNumber);
|
||||
});
|
||||
if (deepSort) {
|
||||
study.seriesList.forEach(series => {
|
||||
sortStudyInstances(series.instances, instancesSortingCriteria);
|
||||
});
|
||||
}
|
||||
|
||||
return study;
|
||||
}
|
||||
|
||||
export { sortStudySeries, sortStudyInstances, sortingCriteria };
|
||||
@@ -0,0 +1,22 @@
|
||||
/* Enabled JPEG images downloading on IE11. */
|
||||
const b64toBlob = (b64Data, contentType = '', sliceSize = 512) => {
|
||||
const byteCharacters = atob(b64Data);
|
||||
const byteArrays = [];
|
||||
|
||||
for (let offset = 0; offset < byteCharacters.length; offset += sliceSize) {
|
||||
const slice = byteCharacters.slice(offset, offset + sliceSize);
|
||||
|
||||
const byteNumbers = new Array(slice.length);
|
||||
for (let i = 0; i < slice.length; i++) {
|
||||
byteNumbers[i] = slice.charCodeAt(i);
|
||||
}
|
||||
|
||||
const byteArray = new Uint8Array(byteNumbers);
|
||||
byteArrays.push(byteArray);
|
||||
}
|
||||
|
||||
const blob = new Blob(byteArrays, { type: contentType });
|
||||
return blob;
|
||||
};
|
||||
|
||||
export default b64toBlob;
|
||||
@@ -9,7 +9,9 @@ import studyMetadataManager from './studyMetadataManager';
|
||||
import updateMetaDataManager from './updateMetaDataManager.js';
|
||||
import writeScript from './writeScript.js';
|
||||
import DicomLoaderService from './dicomLoaderService.js';
|
||||
import b64toBlob from './b64toBlob.js';
|
||||
import * as urlUtil from './urlUtil';
|
||||
import makeCancelable from './makeCancelable';
|
||||
|
||||
const utils = {
|
||||
guid,
|
||||
@@ -18,6 +20,7 @@ const utils = {
|
||||
addServers,
|
||||
sortBy,
|
||||
writeScript,
|
||||
b64toBlob,
|
||||
StackManager,
|
||||
studyMetadataManager,
|
||||
// Updates WADO-RS metaDataManager
|
||||
@@ -25,6 +28,7 @@ const utils = {
|
||||
DICOMTagDescriptions,
|
||||
DicomLoaderService,
|
||||
urlUtil,
|
||||
makeCancelable,
|
||||
};
|
||||
|
||||
export {
|
||||
@@ -34,6 +38,7 @@ export {
|
||||
addServers,
|
||||
sortBy,
|
||||
writeScript,
|
||||
b64toBlob,
|
||||
StackManager,
|
||||
studyMetadataManager,
|
||||
// Updates WADO-RS metaDataManager
|
||||
@@ -41,6 +46,7 @@ export {
|
||||
DICOMTagDescriptions,
|
||||
DicomLoaderService,
|
||||
urlUtil,
|
||||
makeCancelable,
|
||||
};
|
||||
|
||||
export default utils;
|
||||
@@ -9,13 +9,15 @@ describe('Top level exports', () => {
|
||||
'addServers',
|
||||
'sortBy',
|
||||
'writeScript',
|
||||
'b64toBlob',
|
||||
'StackManager',
|
||||
'studyMetadataManager',
|
||||
// Updates WADO-RS metaDataManager
|
||||
'updateMetaDataManager',
|
||||
'DICOMTagDescriptions',
|
||||
'DicomLoaderService',
|
||||
'urlUtil'
|
||||
'urlUtil',
|
||||
'makeCancelable',
|
||||
].sort();
|
||||
|
||||
const exports = Object.keys(utils.default).sort();
|
||||
|
||||
@@ -0,0 +1,157 @@
|
||||
/**
|
||||
* Checks if a series is reconstructable to a 3D volume.
|
||||
*
|
||||
* @param {Object} series The `OHIFSeriesMetadata` object.
|
||||
* @param {Object[]} instances The `OHIFInstanceMetadata` object
|
||||
*/
|
||||
export default function isDisplaySetReconstructable(series, instances) {
|
||||
// Can't reconstruct if we only have one image.
|
||||
|
||||
const modality = series._data.modality; // TODO -> Is there a better way to get this?
|
||||
const isMultiframe = instances[0].getRawValue('x00280008') > 1;
|
||||
|
||||
if (!constructableModalities.includes(modality)) {
|
||||
return { value: false };
|
||||
}
|
||||
|
||||
if (!isMultiframe && instances.length === 1) {
|
||||
return { values: false };
|
||||
}
|
||||
|
||||
if (isMultiframe) {
|
||||
return processMultiframe(instances[0]);
|
||||
} else {
|
||||
return processSingleframe(instances);
|
||||
}
|
||||
}
|
||||
|
||||
function processMultiframe(instance) {
|
||||
//TODO: deal with multriframe checks! return true for now.
|
||||
return { value: true };
|
||||
}
|
||||
|
||||
function processSingleframe(instances) {
|
||||
const firstImage = instances[0];
|
||||
const firstImageRows = firstImage.getTagValue('x00280010');
|
||||
const firstImageColumns = firstImage.getTagValue('x00280011');
|
||||
const firstImageSamplesPerPixel = firstImage.getTagValue('x00280002');
|
||||
// Note: No need to unpack iop, can compare string form.
|
||||
const firstImageOrientationPatient = firstImage.getTagValue('x00200037');
|
||||
|
||||
// Can't reconstruct if we:
|
||||
// -- Have a different dimensions within a displaySet.
|
||||
// -- Have a different number of components within a displaySet.
|
||||
// -- Have different orientations within a displaySet.
|
||||
for (let i = 1; i < instances.length; i++) {
|
||||
const instance = instances[i];
|
||||
const rows = instance.getTagValue('x00280010');
|
||||
const columns = instance.getTagValue('x00280011');
|
||||
const samplesPerPixel = instance.getTagValue('x00280002');
|
||||
const imageOrientationPatient = instance.getTagValue('x00200037');
|
||||
|
||||
if (
|
||||
rows !== firstImageRows ||
|
||||
columns !== firstImageColumns ||
|
||||
samplesPerPixel !== firstImageSamplesPerPixel ||
|
||||
imageOrientationPatient !== firstImageOrientationPatient
|
||||
) {
|
||||
return { value: false };
|
||||
}
|
||||
}
|
||||
|
||||
let missingFrames = 0;
|
||||
|
||||
// Check if frame spacing is approximately equal within a tolerance.
|
||||
// If spacing is on a uniform grid but we are missing frames,
|
||||
// Allow reconstruction, but pass back the number of missing frames.
|
||||
if (instances.length > 2) {
|
||||
const firstIpp = _getImagePositionPatient(firstImage);
|
||||
const lastIpp = _getImagePositionPatient(instances[instances.length - 1]);
|
||||
const averageSpacingBetweenFrames =
|
||||
_getPerpendicularDistance(firstIpp, lastIpp) / (instances.length - 1);
|
||||
|
||||
let previousIpp = firstIpp;
|
||||
|
||||
for (let i = 1; i < instances.length; i++) {
|
||||
const instance = instances[i];
|
||||
const ipp = _getImagePositionPatient(instance);
|
||||
|
||||
const spacingBetweenFrames = _getPerpendicularDistance(ipp, previousIpp);
|
||||
const spacingIssue = _getSpacingIssue(
|
||||
spacingBetweenFrames,
|
||||
averageSpacingBetweenFrames
|
||||
);
|
||||
|
||||
if (spacingIssue) {
|
||||
const issue = spacingIssue.issue;
|
||||
|
||||
if (issue === reconstructionIssues.MISSING_FRAMES) {
|
||||
missingFrames += spacingIssue.missingFrames;
|
||||
} else if (issue === reconstructionIssues.IRREGULAR_SPACING) {
|
||||
return { value: false };
|
||||
}
|
||||
}
|
||||
|
||||
previousIpp = ipp;
|
||||
}
|
||||
}
|
||||
|
||||
return { value: true, missingFrames };
|
||||
}
|
||||
|
||||
// TODO: Is 10% a reasonable tolerance for spacing?
|
||||
const tolerance = 0.1;
|
||||
|
||||
/**
|
||||
* Checks for spacing issues.
|
||||
*
|
||||
* @param {number} spacing The spacing between two frames.
|
||||
* @param {number} averageSpacing The average spacing between all frames.
|
||||
*
|
||||
* @returns {Object} An object containing the issue and extra information if necessary.
|
||||
*/
|
||||
function _getSpacingIssue(spacing, averageSpacing) {
|
||||
const equalWithinTolerance =
|
||||
Math.abs(spacing - averageSpacing) < averageSpacing * tolerance;
|
||||
|
||||
if (equalWithinTolerance) {
|
||||
return;
|
||||
}
|
||||
|
||||
const multipleOfAverageSpacing = spacing / averageSpacing;
|
||||
|
||||
const numberOfSpacings = Math.round(multipleOfAverageSpacing);
|
||||
|
||||
const errorForEachSpacing =
|
||||
Math.abs(spacing - numberOfSpacings * averageSpacing) / numberOfSpacings;
|
||||
|
||||
if (errorForEachSpacing < tolerance * averageSpacing) {
|
||||
return {
|
||||
issue: reconstructionIssues.MISSING_FRAMES,
|
||||
missingFrames: numberOfSpacings - 1,
|
||||
};
|
||||
}
|
||||
|
||||
return { issue: reconstructionIssues.IRREGULAR_SPACING };
|
||||
}
|
||||
|
||||
function _getImagePositionPatient(instance) {
|
||||
return instance
|
||||
.getTagValue('x00200032')
|
||||
.split('\\')
|
||||
.map(element => Number(element));
|
||||
}
|
||||
|
||||
function _getPerpendicularDistance(a, b) {
|
||||
return Math.sqrt(
|
||||
Math.pow(a[0] - b[0], 2) +
|
||||
Math.pow(a[1] - b[1], 2) +
|
||||
Math.pow(a[2] - b[2], 2)
|
||||
);
|
||||
}
|
||||
|
||||
const constructableModalities = ['MR', 'CT', 'PT', 'NM'];
|
||||
const reconstructionIssues = {
|
||||
MISSING_FRAMES: 'missingframes',
|
||||
IRREGULAR_SPACING: 'irregularspacing',
|
||||
};
|
||||
@@ -0,0 +1,19 @@
|
||||
export default function makeCancelable(thenable) {
|
||||
let isCanceled = false;
|
||||
const promise = Promise.resolve(thenable).then(
|
||||
function(result) {
|
||||
if (isCanceled) throw Object.freeze({ isCanceled });
|
||||
return result;
|
||||
},
|
||||
function(error) {
|
||||
if (isCanceled) throw Object.freeze({ isCanceled, error });
|
||||
throw error;
|
||||
}
|
||||
);
|
||||
return Object.assign(Object.create(promise), {
|
||||
then: promise.then.bind(promise),
|
||||
cancel() {
|
||||
isCanceled = true;
|
||||
},
|
||||
});
|
||||
}
|
||||
@@ -77,14 +77,6 @@ const getWadoRsInstanceMetaData = (study, series, instance) => {
|
||||
*/
|
||||
function updateMetaDataManagerForSeries(study, series) {
|
||||
series.instances.forEach(instance => {
|
||||
// Cache just images that are going to be loaded via WADO-RS
|
||||
if (
|
||||
instance.imageRendering !== 'wadors' &&
|
||||
instance.thumbnailRendering !== 'wadors'
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
const metaData = getWadoRsInstanceMetaData(study, series, instance);
|
||||
const numberOfFrames = instance.numberOfFrames || 1;
|
||||
|
||||
@@ -94,7 +86,7 @@ function updateMetaDataManagerForSeries(study, series) {
|
||||
for (let frameNumber = 0; frameNumber < numberOfFrames; frameNumber++) {
|
||||
const imageId = getWADORSImageId(instance, frameNumber);
|
||||
|
||||
// TODO Drop dependency on this
|
||||
// TODO Make a metadata manager which uses study/series/instance UIDS instead of imageIds
|
||||
cornerstoneWADOImageLoader.wadors.metaDataManager.add(imageId, metaData);
|
||||
}
|
||||
});
|
||||
|
||||
@@ -6,7 +6,7 @@ const PARAM_PATTERN_IDENTIFIER = ':';
|
||||
function toLowerCaseFirstLetter(word) {
|
||||
return word[0].toLowerCase() + word.slice(1);
|
||||
}
|
||||
const getFilters = (location = {}) => {
|
||||
const getQueryFilters = (location = {}) => {
|
||||
const { search } = location;
|
||||
|
||||
if (!search) {
|
||||
@@ -55,13 +55,19 @@ const replaceParam = (path = '', paramKey, paramValue) => {
|
||||
return path;
|
||||
};
|
||||
|
||||
const isValidPath = path => {
|
||||
const paramPatternPiece = `/${PARAM_PATTERN_IDENTIFIER}`;
|
||||
return path.indexOf(paramPatternPiece) < 0;
|
||||
};
|
||||
|
||||
const queryString = {
|
||||
getQueryFilters: getFilters,
|
||||
getQueryFilters,
|
||||
};
|
||||
|
||||
const paramString = {
|
||||
parseParam: parseParam,
|
||||
replaceParam: replaceParam,
|
||||
isValidPath,
|
||||
parseParam,
|
||||
replaceParam,
|
||||
};
|
||||
|
||||
export { parse, queryString, paramString };
|
||||
@@ -3,6 +3,39 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.52.1](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.52.0...@ohif/i18n@0.52.1) (2019-11-18)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* minor date picker UX improvements ([813ee5e](https://github.com/OHIF/Viewers/commit/813ee5ed4d78b7bda234922d5f3389efe346451c))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.52.0](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.51.0...@ohif/i18n@0.52.0) (2019-11-06)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* modal provider ([#1151](https://github.com/OHIF/Viewers/issues/1151)) ([75d88bc](https://github.com/OHIF/Viewers/commit/75d88bc454710d2dcdbc7d68c4d9df041159c840)), closes [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1146](https://github.com/OHIF/Viewers/issues/1146) [#1142](https://github.com/OHIF/Viewers/issues/1142) [#1143](https://github.com/OHIF/Viewers/issues/1143) [#1110](https://github.com/OHIF/Viewers/issues/1110) [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1119](https://github.com/OHIF/Viewers/issues/1119)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.51.0](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.50.5...@ohif/i18n@0.51.0) (2019-10-15)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Add browser info and app version ([#1046](https://github.com/OHIF/Viewers/issues/1046)) ([c217b8b](https://github.com/OHIF/Viewers/commit/c217b8b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.50.5](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.50.4...@ohif/i18n@0.50.5) (2019-10-04)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/i18n",
|
||||
"version": "0.50.5",
|
||||
"version": "0.52.1",
|
||||
"description": "Internationalization library for The OHIF Viewer",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -0,0 +1,14 @@
|
||||
{
|
||||
"Browser": "Browser",
|
||||
"Build Number": "Build Number",
|
||||
"Latest Master Commits": "Latest Master Commits",
|
||||
"More details": "More details",
|
||||
"Name": "Name",
|
||||
"OHIF Viewer - About": "OHIF Viewer - About",
|
||||
"OS": "OS",
|
||||
"Report an issue": "Report an issue",
|
||||
"Repository URL": "Repository URL",
|
||||
"Value": "Value",
|
||||
"Version Information": "Version Information",
|
||||
"Visit the forum": "Visit the forum"
|
||||
}
|
||||
@@ -1,4 +1,5 @@
|
||||
{
|
||||
"Close": "Close",
|
||||
"Image": "Image",
|
||||
"Layout": "Layout",
|
||||
"Measurements": "Measurements",
|
||||
|
||||
@@ -0,0 +1,5 @@
|
||||
{
|
||||
"Clear dates": "Clear dates",
|
||||
"End Date": "End Date",
|
||||
"Start Date": "Start Date"
|
||||
}
|
||||
@@ -1,19 +1,23 @@
|
||||
import Buttons from "./Buttons.json";
|
||||
import CineDialog from "./CineDialog.json";
|
||||
import Common from "./Common.json";
|
||||
import Header from "./Header.json";
|
||||
import MeasurementTable from "./MeasurementTable.json";
|
||||
import StudyList from "./StudyList.json";
|
||||
import UserPreferencesModal from "./UserPreferencesModal.json";
|
||||
import AboutModal from './AboutModal.json';
|
||||
import Buttons from './Buttons.json';
|
||||
import CineDialog from './CineDialog.json';
|
||||
import Common from './Common.json';
|
||||
import DatePicker from './DatePicker.json';
|
||||
import Header from './Header.json';
|
||||
import MeasurementTable from './MeasurementTable.json';
|
||||
import StudyList from './StudyList.json';
|
||||
import UserPreferencesModal from './UserPreferencesModal.json';
|
||||
|
||||
export default {
|
||||
export default {
|
||||
'en-US': {
|
||||
AboutModal,
|
||||
Buttons,
|
||||
CineDialog,
|
||||
Common,
|
||||
DatePicker,
|
||||
Header,
|
||||
MeasurementTable,
|
||||
StudyList,
|
||||
UserPreferencesModal,
|
||||
}
|
||||
};
|
||||
},
|
||||
};
|
||||
@@ -0,0 +1,14 @@
|
||||
{
|
||||
"Browser": "Navegador",
|
||||
"Build Number": "Número da compilação",
|
||||
"Latest Master Commits": "Últimos Commits na Master",
|
||||
"More details": "Mais detalhes",
|
||||
"Name": "Nome",
|
||||
"OHIF Viewer - About": "OHIF Viewer - Sobre",
|
||||
"OS": "SO",
|
||||
"Report an issue": "Informar um problema",
|
||||
"Repository URL": "URL do Repositório",
|
||||
"Value": "Valor",
|
||||
"Version Information": "Informação da Versão",
|
||||
"Visit the forum": "Visite o fórum"
|
||||
}
|
||||
@@ -1,4 +1,5 @@
|
||||
{
|
||||
"Close": "Fechar",
|
||||
"Image": "Imagem",
|
||||
"Layout": "Layout",
|
||||
"More": "Mais",
|
||||
|
||||
@@ -0,0 +1,5 @@
|
||||
{
|
||||
"Clear dates": "Limpar datas",
|
||||
"End Date": "Data Final",
|
||||
"Start Date": "Data Inicial"
|
||||
}
|
||||
@@ -1,15 +1,19 @@
|
||||
import Buttons from "./Buttons.json";
|
||||
import CineDialog from "./CineDialog.json";
|
||||
import Common from "./Common.json";
|
||||
import Header from "./Header.json";
|
||||
import UserPreferencesModal from "./UserPreferencesModal.json";
|
||||
import AboutModal from './AboutModal.json';
|
||||
import Buttons from './Buttons.json';
|
||||
import CineDialog from './CineDialog.json';
|
||||
import Common from './Common.json';
|
||||
import DatePicker from './DatePicker.json';
|
||||
import Header from './Header.json';
|
||||
import UserPreferencesModal from './UserPreferencesModal.json';
|
||||
|
||||
export default {
|
||||
export default {
|
||||
'pt-BR': {
|
||||
AboutModal,
|
||||
Buttons,
|
||||
CineDialog,
|
||||
Common,
|
||||
DatePicker,
|
||||
Header,
|
||||
UserPreferencesModal,
|
||||
}
|
||||
};
|
||||
},
|
||||
};
|
||||
@@ -3,6 +3,236 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.62.4](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.62.3...@ohif/ui@0.62.4) (2019-11-18)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* minor date picker UX improvements ([813ee5e](https://github.com/OHIF/Viewers/commit/813ee5ed4d78b7bda234922d5f3389efe346451c))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.62.3](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.62.2...@ohif/ui@0.62.3) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.62.2](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.62.1...@ohif/ui@0.62.2) (2019-11-15)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.62.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.62.0...@ohif/ui@0.62.1) (2019-11-14)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.62.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.61.0...@ohif/ui@0.62.0) (2019-11-13)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* expose UiNotifications service ([#1172](https://github.com/OHIF/Viewers/issues/1172)) ([5c04e34](https://github.com/OHIF/Viewers/commit/5c04e34c8fb2394ab7acd9eb4f2ab12afeb2f255))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.61.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.60.1...@ohif/ui@0.61.0) (2019-11-12)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Update hotkeys and user preferences modal ([#1135](https://github.com/OHIF/Viewers/issues/1135)) ([e62f5f8](https://github.com/OHIF/Viewers/commit/e62f5f8dd28ab363f23671cd21cee115abb870ff)), closes [#923](https://github.com/OHIF/Viewers/issues/923)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.60.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.60.0...@ohif/ui@0.60.1) (2019-11-08)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Fix display issues with incorrect thumbnails. Change ImageThumb to functional component. ([#1148](https://github.com/OHIF/Viewers/issues/1148)) ([d70eae3](https://github.com/OHIF/Viewers/commit/d70eae3eb04fe854464f3e62316df8869bba6f11))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.60.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.59.1...@ohif/ui@0.60.0) (2019-11-06)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* modal provider ([#1151](https://github.com/OHIF/Viewers/issues/1151)) ([75d88bc](https://github.com/OHIF/Viewers/commit/75d88bc454710d2dcdbc7d68c4d9df041159c840)), closes [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1146](https://github.com/OHIF/Viewers/issues/1146) [#1142](https://github.com/OHIF/Viewers/issues/1142) [#1143](https://github.com/OHIF/Viewers/issues/1143) [#1110](https://github.com/OHIF/Viewers/issues/1110) [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116) [#1119](https://github.com/OHIF/Viewers/issues/1119)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.59.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.59.0...@ohif/ui@0.59.1) (2019-11-05)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* [#1075](https://github.com/OHIF/Viewers/issues/1075) Returning to the Study List before all series have finishe… ([#1090](https://github.com/OHIF/Viewers/issues/1090)) ([ecaf578](https://github.com/OHIF/Viewers/commit/ecaf578f92dc40294cec7ff9b272fb432dec4125))
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.59.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.5...@ohif/ui@0.59.0) (2019-11-04)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 New modal provider ([#1110](https://github.com/OHIF/Viewers/issues/1110)) ([5ee832b](https://github.com/OHIF/Viewers/commit/5ee832b19505a4e8e5756660ce6ed03a7f18dec3)), closes [#1086](https://github.com/OHIF/Viewers/issues/1086) [#1116](https://github.com/OHIF/Viewers/issues/1116)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.58.5](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.4...@ohif/ui@0.58.5) (2019-11-04)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Minor issues measurement panel related to description ([#1142](https://github.com/OHIF/Viewers/issues/1142)) ([681384b](https://github.com/OHIF/Viewers/commit/681384b7425c83b02a0ed83371ca92d78ca7838c))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.58.4](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.3...@ohif/ui@0.58.4) (2019-10-31)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* application crash if patientName is an object ([#1138](https://github.com/OHIF/Viewers/issues/1138)) ([64cf3b3](https://github.com/OHIF/Viewers/commit/64cf3b324da2383a927af1df2d46db2fca5318aa))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.58.3](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.2...@ohif/ui@0.58.3) (2019-10-30)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Fix ghost shadow on thumb ([#1113](https://github.com/OHIF/Viewers/issues/1113)) ([caaa032](https://github.com/OHIF/Viewers/commit/caaa032c4bc24fd69fdb01a15a8feb2721c321db))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.58.2](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.1...@ohif/ui@0.58.2) (2019-10-29)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* 🐛 Limit image download size to avoid browser issues ([#1112](https://github.com/OHIF/Viewers/issues/1112)) ([5716b71](https://github.com/OHIF/Viewers/commit/5716b71d409ee1c6f13393c8cb7f50222415e198)), closes [#1099](https://github.com/OHIF/Viewers/issues/1099)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.58.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.58.0...@ohif/ui@0.58.1) (2019-10-29)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* **StudyList:** camel case colSpan ([#1123](https://github.com/OHIF/Viewers/issues/1123)) ([0d498ba](https://github.com/OHIF/Viewers/commit/0d498ba17ddde8d8f0c51d742770e1574041eec0))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.58.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.57.1...@ohif/ui@0.58.0) (2019-10-28)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* responsive study list ([#1068](https://github.com/OHIF/Viewers/issues/1068)) ([2cdef4b](https://github.com/OHIF/Viewers/commit/2cdef4b9844cc2ce61e9ce76b5a942ba7051fe16))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.57.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.57.0...@ohif/ui@0.57.1) (2019-10-28)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* MIP styling ([#1109](https://github.com/OHIF/Viewers/issues/1109)) ([0d21cc6](https://github.com/OHIF/Viewers/commit/0d21cc6ad0c47706b9e62e05fe2a0f1d86339760))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.57.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.56.1...@ohif/ui@0.57.0) (2019-10-26)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Snapshot Download Tool ([#840](https://github.com/OHIF/Viewers/issues/840)) ([450e098](https://github.com/OHIF/Viewers/commit/450e0981a5ba054fcfcb85eeaeb18371af9088f8))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.56.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.56.0...@ohif/ui@0.56.1) (2019-10-26)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.56.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.55.0...@ohif/ui@0.56.0) (2019-10-22)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Load spinner when selecting gcloud store. Add key on td ([#1034](https://github.com/OHIF/Viewers/issues/1034)) ([e62f403](https://github.com/OHIF/Viewers/commit/e62f403fe9e3df56713128e3d59045824b086d8d)), closes [#1057](https://github.com/OHIF/Viewers/issues/1057)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.55.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.54.0...@ohif/ui@0.55.0) (2019-10-15)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Add browser info and app version ([#1046](https://github.com/OHIF/Viewers/issues/1046)) ([c217b8b](https://github.com/OHIF/Viewers/commit/c217b8b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.54.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.53.4...@ohif/ui@0.54.0) (2019-10-14)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Notification Service ([#1011](https://github.com/OHIF/Viewers/issues/1011)) ([92c8996](https://github.com/OHIF/Viewers/commit/92c8996))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.53.4](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.53.3...@ohif/ui@0.53.4) (2019-10-11)
|
||||
|
||||
**Note:** Version bump only for package @ohif/ui
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/ui",
|
||||
"version": "0.53.4",
|
||||
"version": "0.62.4",
|
||||
"description": "A set of React components for Medical Imaging Viewers",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
@@ -39,6 +39,7 @@
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"@ohif/i18n": "^0.2.3",
|
||||
"browser-detect": "^0.2.28",
|
||||
"classnames": "2.2.6",
|
||||
"i18next": "^17.0.3",
|
||||
"i18next-browser-languagedetector": "^3.0.1",
|
||||
@@ -47,10 +48,10 @@
|
||||
"moment": "2.24.0",
|
||||
"prop-types": "15.6.2",
|
||||
"react-bootstrap-modal": "4.2.0",
|
||||
"react-dates": "18.4.1",
|
||||
"react-dnd": "9.3.4",
|
||||
"react-dnd-html5-backend": "^9.3.4",
|
||||
"react-dnd-touch-backend": "^9.3.4",
|
||||
"react-dates": "21.2.1",
|
||||
"react-dnd": "9.4.0",
|
||||
"react-dnd-html5-backend": "^9.4.0",
|
||||
"react-dnd-touch-backend": "^9.4.0",
|
||||
"react-i18next": "^10.11.0",
|
||||
"react-with-direction": "1.3.0"
|
||||
},
|
||||
|
||||
@@ -0,0 +1,107 @@
|
||||
import React from 'react';
|
||||
import detect from 'browser-detect';
|
||||
import { useTranslation } from 'react-i18next';
|
||||
|
||||
import './AboutContent.styl';
|
||||
|
||||
const AboutContent = () => {
|
||||
const { t } = useTranslation('AboutContent');
|
||||
|
||||
const { os, version, name } = detect();
|
||||
const capitalize = s =>
|
||||
s.substr(0, 1).toUpperCase() + s.substr(1).toLowerCase();
|
||||
|
||||
const itemsPreset = () => {
|
||||
return [
|
||||
{
|
||||
name: t('Repository URL'),
|
||||
value: 'https://github.com/OHIF/Viewers/',
|
||||
link: 'https://github.com/OHIF/Viewers/',
|
||||
},
|
||||
{
|
||||
name: t('Latest Master Commits'),
|
||||
value: 'https://github.com/OHIF/Viewers/commits/master',
|
||||
link: 'https://github.com/OHIF/Viewers/commits/master',
|
||||
},
|
||||
{
|
||||
name: 'Version Number',
|
||||
value: process.env.VERSION_NUMBER,
|
||||
},
|
||||
{
|
||||
name: t('Build Number'),
|
||||
value: process.env.BUILD_NUM,
|
||||
},
|
||||
{
|
||||
name: t('Browser'),
|
||||
value: `${capitalize(name)} ${version}`,
|
||||
},
|
||||
{
|
||||
name: t('OS'),
|
||||
value: os,
|
||||
},
|
||||
];
|
||||
};
|
||||
|
||||
const renderTableRow = ({ name, value, link }) => (
|
||||
<tr key={name} style={{ backgroundColor: 'transparent' }}>
|
||||
<td>{name}</td>
|
||||
<td>
|
||||
{link ? (
|
||||
<a target="_blank" rel="noopener noreferrer" href={link}>
|
||||
{value}
|
||||
</a>
|
||||
) : (
|
||||
value
|
||||
)}
|
||||
</td>
|
||||
</tr>
|
||||
);
|
||||
|
||||
return (
|
||||
<div data-cy="about-modal">
|
||||
<div className="btn-group">
|
||||
<a
|
||||
className="btn btn-default"
|
||||
target="_blank"
|
||||
rel="noopener noreferrer"
|
||||
href="https://groups.google.com/forum/#!forum/cornerstone-platform"
|
||||
>
|
||||
{t('Visit the forum')}
|
||||
</a>
|
||||
{` `}
|
||||
<a
|
||||
className="btn btn-default"
|
||||
target="_blank"
|
||||
rel="noopener noreferrer"
|
||||
href="https://github.com/OHIF/Viewers/issues/new/choose"
|
||||
>
|
||||
{t('Report an issue')}
|
||||
</a>
|
||||
{` `}
|
||||
<a
|
||||
className="btn btn-default"
|
||||
target="_blank"
|
||||
rel="noopener noreferrer"
|
||||
href="http://ohif.org"
|
||||
>
|
||||
{t('More details')}
|
||||
</a>
|
||||
</div>
|
||||
<div>
|
||||
<h3>{t('Version Information')}</h3>
|
||||
<table className="table table-responsive">
|
||||
<thead>
|
||||
<tr>
|
||||
<th>{t('Name')}</th>
|
||||
<th>{t('Value')}</th>
|
||||
</tr>
|
||||
</thead>
|
||||
<tbody>{itemsPreset().map(item => renderTableRow(item))}</tbody>
|
||||
</table>
|
||||
</div>
|
||||
</div>
|
||||
);
|
||||
};
|
||||
|
||||
export { AboutContent };
|
||||
export default AboutContent;
|
||||
+3
-3
@@ -1,7 +1,7 @@
|
||||
@import './../../design/styles/common/button.styl'
|
||||
@import './../../design/styles/common/table.styl'
|
||||
@import '../../../design/styles/common/button.styl'
|
||||
@import '../../../design/styles/common/table.styl'
|
||||
|
||||
.AboutModal
|
||||
.AboutContent
|
||||
.btn
|
||||
border-color: #ccc;
|
||||
|
||||
@@ -0,0 +1,325 @@
|
||||
import React, { useEffect, useState, createRef } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import { useTranslation } from 'react-i18next';
|
||||
|
||||
import './ViewportDownloadForm.styl';
|
||||
import { TextInput, Select } from '@ohif/ui';
|
||||
|
||||
const FILE_TYPE_OPTIONS = [
|
||||
{
|
||||
key: 'jpg',
|
||||
value: 'jpg',
|
||||
},
|
||||
{
|
||||
key: 'png',
|
||||
value: 'png',
|
||||
},
|
||||
];
|
||||
|
||||
const DEFAULT_FILENAME = 'image';
|
||||
|
||||
const ViewportDownloadForm = ({
|
||||
activeViewport,
|
||||
onClose,
|
||||
updateViewportPreview,
|
||||
enableViewport,
|
||||
disableViewport,
|
||||
toggleAnnotations,
|
||||
loadImage,
|
||||
downloadBlob,
|
||||
defaultSize,
|
||||
minimumSize,
|
||||
maximumSize,
|
||||
canvasClass,
|
||||
}) => {
|
||||
const [t] = useTranslation('ViewportDownloadForm');
|
||||
|
||||
const [filename, setFilename] = useState(DEFAULT_FILENAME);
|
||||
const [fileType, setFileType] = useState('jpg');
|
||||
|
||||
const [height, setHeight] = useState(defaultSize);
|
||||
const [width, setWidth] = useState(defaultSize);
|
||||
|
||||
const [showAnnotations, setShowAnnotations] = useState(true);
|
||||
|
||||
const [keepAspect, setKeepAspect] = useState(true);
|
||||
const [lastImage, setLastImage] = useState();
|
||||
|
||||
const [viewportElement, setViewportElement] = useState();
|
||||
const [viewportElementHeight, setViewportElementHeight] = useState(
|
||||
minimumSize
|
||||
);
|
||||
const [viewportElementWidth, setViewportElementWidth] = useState(minimumSize);
|
||||
|
||||
const [downloadCanvas, setDownloadCanvas] = useState({
|
||||
ref: createRef(),
|
||||
width: minimumSize,
|
||||
height: minimumSize,
|
||||
});
|
||||
|
||||
const [viewportPreview, setViewportPreview] = useState({
|
||||
src: null,
|
||||
width: minimumSize,
|
||||
height: minimumSize,
|
||||
});
|
||||
|
||||
useEffect(() => {
|
||||
enableViewport(viewportElement);
|
||||
|
||||
return () => {
|
||||
disableViewport(viewportElement);
|
||||
|
||||
setHeight(defaultSize);
|
||||
setWidth(defaultSize);
|
||||
};
|
||||
}, [defaultSize, disableViewport, enableViewport, viewportElement]);
|
||||
|
||||
useEffect(() => {
|
||||
const validSize = value => (value >= minimumSize ? value : minimumSize);
|
||||
const loadAndUpdateViewports = async () => {
|
||||
const {
|
||||
image,
|
||||
width: scaledWidth,
|
||||
height: scaledHeight,
|
||||
} = await loadImage(activeViewport, viewportElement, width, height);
|
||||
setLastImage(image);
|
||||
|
||||
toggleAnnotations(showAnnotations, viewportElement);
|
||||
|
||||
setViewportElementHeight(validSize(scaledHeight));
|
||||
setViewportElementWidth(validSize(scaledWidth));
|
||||
|
||||
setDownloadCanvas(state => ({
|
||||
...state,
|
||||
height: validSize(scaledHeight),
|
||||
width: validSize(scaledWidth),
|
||||
}));
|
||||
|
||||
const {
|
||||
dataUrl,
|
||||
width: viewportElementWidth,
|
||||
height: viewportElementHeight,
|
||||
} = await updateViewportPreview(
|
||||
viewportElement,
|
||||
downloadCanvas.ref.current,
|
||||
fileType
|
||||
);
|
||||
|
||||
setViewportPreview(state => ({
|
||||
...state,
|
||||
src: dataUrl,
|
||||
width: validSize(viewportElementWidth),
|
||||
height: validSize(viewportElementHeight),
|
||||
}));
|
||||
};
|
||||
|
||||
loadAndUpdateViewports();
|
||||
}, [
|
||||
activeViewport,
|
||||
viewportElement,
|
||||
showAnnotations,
|
||||
height,
|
||||
width,
|
||||
loadImage,
|
||||
toggleAnnotations,
|
||||
updateViewportPreview,
|
||||
fileType,
|
||||
downloadCanvas.ref,
|
||||
minimumSize,
|
||||
maximumSize,
|
||||
]);
|
||||
|
||||
const onHeightChange = event => {
|
||||
const newHeight = Math.min(event.target.value, maximumSize);
|
||||
setHeight(newHeight);
|
||||
|
||||
setViewportElementHeight(newHeight);
|
||||
|
||||
setDownloadCanvas(state => ({
|
||||
...state,
|
||||
height: newHeight,
|
||||
}));
|
||||
|
||||
if (keepAspect) {
|
||||
const multiplier = newHeight / lastImage.height;
|
||||
const newWidth = Math.round(lastImage.width * multiplier);
|
||||
|
||||
setWidth(newWidth);
|
||||
setViewportElementWidth(newWidth);
|
||||
|
||||
setDownloadCanvas(state => ({
|
||||
...state,
|
||||
width: newWidth,
|
||||
}));
|
||||
}
|
||||
};
|
||||
|
||||
const onWidthChange = event => {
|
||||
const newWidth = Math.min(event.target.value, maximumSize);
|
||||
setWidth(newWidth);
|
||||
|
||||
setViewportElementWidth(newWidth);
|
||||
|
||||
setDownloadCanvas(state => ({
|
||||
...state,
|
||||
width: newWidth,
|
||||
}));
|
||||
|
||||
if (keepAspect) {
|
||||
const multiplier = newWidth / lastImage.width;
|
||||
const newHeight = Math.round(lastImage.height * multiplier);
|
||||
|
||||
setHeight(newHeight);
|
||||
setViewportElementHeight(newHeight);
|
||||
|
||||
setDownloadCanvas(state => ({
|
||||
...state,
|
||||
height: newHeight,
|
||||
}));
|
||||
}
|
||||
};
|
||||
|
||||
const downloadImage = () => {
|
||||
downloadBlob(
|
||||
filename || DEFAULT_FILENAME,
|
||||
fileType,
|
||||
viewportElement,
|
||||
downloadCanvas.ref.current
|
||||
);
|
||||
};
|
||||
|
||||
return (
|
||||
<>
|
||||
<div className="title">
|
||||
{t(
|
||||
'Please specify the dimensions, filename, and desired type for the output image.'
|
||||
)}
|
||||
</div>
|
||||
|
||||
<div className="file-info-container">
|
||||
<div className="col">
|
||||
<div className="width">
|
||||
<TextInput
|
||||
type="number"
|
||||
min={minimumSize}
|
||||
max={maximumSize}
|
||||
value={width}
|
||||
label={t('Image width (px)')}
|
||||
onChange={onWidthChange}
|
||||
/>
|
||||
</div>
|
||||
<div className="height">
|
||||
<TextInput
|
||||
type="number"
|
||||
min={minimumSize}
|
||||
max={maximumSize}
|
||||
value={height}
|
||||
label={t('Image height (px)')}
|
||||
onChange={onHeightChange}
|
||||
/>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div className="col">
|
||||
<div className="file-name">
|
||||
<TextInput
|
||||
type="text"
|
||||
value={filename}
|
||||
onChange={event => setFilename(event.target.value)}
|
||||
label={t('File name')}
|
||||
id="file-name"
|
||||
/>
|
||||
</div>
|
||||
<div className="file-type">
|
||||
<Select
|
||||
value={fileType}
|
||||
onChange={event => setFileType(event.target.value)}
|
||||
options={FILE_TYPE_OPTIONS}
|
||||
label={t('File type')}
|
||||
/>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div className="col">
|
||||
<div className="show-annotations">
|
||||
<label htmlFor="show-annotations" className="form-check-label">
|
||||
<input
|
||||
id="show-annotations"
|
||||
type="checkbox"
|
||||
className="form-check-input"
|
||||
checked={showAnnotations}
|
||||
onChange={event => setShowAnnotations(event.target.checked)}
|
||||
/>
|
||||
{t('Show Annotations')}
|
||||
</label>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div
|
||||
style={{
|
||||
height: viewportElementHeight,
|
||||
width: viewportElementWidth,
|
||||
position: 'absolute',
|
||||
left: '9999px',
|
||||
}}
|
||||
ref={ref => setViewportElement(ref)}
|
||||
>
|
||||
<canvas
|
||||
className={canvasClass}
|
||||
style={{
|
||||
height: downloadCanvas.height,
|
||||
width: downloadCanvas.width,
|
||||
display: 'block',
|
||||
}}
|
||||
width={downloadCanvas.width}
|
||||
height={downloadCanvas.height}
|
||||
ref={downloadCanvas.ref}
|
||||
></canvas>
|
||||
</div>
|
||||
|
||||
<div className="preview">
|
||||
<h4> {t('Image Preview')}</h4>
|
||||
<img
|
||||
className="viewport-preview"
|
||||
src={viewportPreview.src}
|
||||
alt="Viewport Preview"
|
||||
style={{
|
||||
height: viewportPreview.height,
|
||||
width: viewportPreview.width,
|
||||
}}
|
||||
/>
|
||||
</div>
|
||||
|
||||
<div className="actions">
|
||||
<div className="action-cancel">
|
||||
<button type="button" className="btn btn-danger" onClick={onClose}>
|
||||
{t('Cancel')}
|
||||
</button>
|
||||
</div>
|
||||
<div className="action-save">
|
||||
<button onClick={downloadImage} className="btn btn-primary">
|
||||
{t('Download')}
|
||||
</button>
|
||||
</div>
|
||||
</div>
|
||||
</>
|
||||
);
|
||||
};
|
||||
|
||||
ViewportDownloadForm.propTypes = {
|
||||
onClose: PropTypes.func.isRequired,
|
||||
activeViewport: PropTypes.object,
|
||||
updateViewportPreview: PropTypes.func.isRequired,
|
||||
enableViewport: PropTypes.func.isRequired,
|
||||
disableViewport: PropTypes.func.isRequired,
|
||||
toggleAnnotations: PropTypes.func.isRequired,
|
||||
loadImage: PropTypes.func.isRequired,
|
||||
downloadBlob: PropTypes.func.isRequired,
|
||||
defaultSize: PropTypes.number.isRequired,
|
||||
minimumSize: PropTypes.number.isRequired,
|
||||
maximumSize: PropTypes.number.isRequired,
|
||||
canvasClass: PropTypes.string.isRequired,
|
||||
};
|
||||
|
||||
export default ViewportDownloadForm;
|
||||
@@ -0,0 +1,107 @@
|
||||
@import '../../../design/styles/common/global.styl'
|
||||
@import '../../../design/styles/common/form.styl'
|
||||
@import '../../../design/styles/common/button.styl'
|
||||
|
||||
.ViewportDownloadForm
|
||||
color: var(--text-secondary-color);
|
||||
filter: drop-shadow(0 0 3px var(--ui-gray-darkest));
|
||||
border: none;
|
||||
border-radius: 8px;
|
||||
width: inherit;
|
||||
padding: 15px;
|
||||
background: transparent;
|
||||
z-index: 1080 !important;
|
||||
|
||||
.title
|
||||
margin: 0;
|
||||
font-weight: bold;
|
||||
|
||||
.file-info-container
|
||||
display: flex;
|
||||
flex-direction: row;
|
||||
margin: 20px 0;
|
||||
border-radius: 5px;
|
||||
padding: 20px 10px 0;
|
||||
background-color: #16202b;
|
||||
|
||||
.form-control.input-ohif
|
||||
padding: 6px 12px;
|
||||
|
||||
@media screen and (max-width: 1023px)
|
||||
flex-direction: column;
|
||||
|
||||
.col
|
||||
flex-grow: 1;
|
||||
|
||||
.input-ohif
|
||||
margin-left: 15px;
|
||||
@media screen and (max-width: 1023px)
|
||||
margin-left: 0;
|
||||
margin-top: 5px;
|
||||
width: 100%;
|
||||
|
||||
.file-type
|
||||
.select-ohif
|
||||
margin-left: 17px;
|
||||
@media screen and (max-width: 1023px)
|
||||
margin-left: 0;
|
||||
width: 100%;
|
||||
|
||||
.show-annotations
|
||||
font-weight: bold;
|
||||
line-height: 30px;
|
||||
input
|
||||
margin-right: 7px;
|
||||
vertical-align: middle;
|
||||
label
|
||||
display: flex;
|
||||
justify-content: center;
|
||||
align-items: center;
|
||||
|
||||
.preview
|
||||
display: flex;
|
||||
flex-direction column;
|
||||
height: fit-content;
|
||||
background-color: #16202b;
|
||||
width: fit-content;
|
||||
padding: 10px;
|
||||
border-radius: 5px;
|
||||
align-self: center;
|
||||
@media screen and (max-width: 1023px)
|
||||
width: 100%;
|
||||
justify-content: center;
|
||||
align-items: center;
|
||||
|
||||
.viewport-preview
|
||||
max-height: 512px;
|
||||
max-width: 512px;
|
||||
|
||||
h4
|
||||
width: 100%;
|
||||
text-align center;
|
||||
font-size: 1.3em;
|
||||
margin: 0 0 10px;
|
||||
|
||||
.preview-container
|
||||
width: auto;
|
||||
height: 100%;
|
||||
max-height: 400px;
|
||||
object-fit contain;
|
||||
|
||||
.actions
|
||||
display: flex;
|
||||
height: 60px;
|
||||
flex-wrap: nowrap;
|
||||
justify-content: flex-end;
|
||||
align-items: center;
|
||||
.action-cancel
|
||||
margin: 0 20px;
|
||||
.actions-save
|
||||
margin: 0 0 0 10px;
|
||||
|
||||
.modal-dialog
|
||||
height: 100%;
|
||||
|
||||
.modal-body
|
||||
display: flex;
|
||||
flex-direction: column;
|
||||
+39
@@ -0,0 +1,39 @@
|
||||
---
|
||||
name: Viewport Download Form
|
||||
menu: Components
|
||||
route: /components/viewport-download-form
|
||||
---
|
||||
|
||||
import { Playground, Props } from 'docz'
|
||||
import { State } from 'react-powerplug'
|
||||
import { ViewportDownloadForm } from './../index'
|
||||
import NameSpace from '../../../__docs__/NameSpace'
|
||||
|
||||
# Viewport Download Form
|
||||
|
||||
## Basic usage
|
||||
|
||||
<Playground>
|
||||
<State
|
||||
initial={{}}
|
||||
>
|
||||
{({ state, setState }) => (
|
||||
<React.Fragment>
|
||||
<div>
|
||||
<pre>{JSON.stringify(state, null, 2)}</pre>
|
||||
</div>
|
||||
<div style={{ maxWidth: '400px', margin: '0 auto' }}>
|
||||
<ViewportDownloadForm />
|
||||
</div>
|
||||
</React.Fragment>
|
||||
)}
|
||||
</State>
|
||||
</Playground>
|
||||
|
||||
## API
|
||||
|
||||
<Props of={ViewportDownloadForm} />
|
||||
|
||||
## Translation Namespace
|
||||
|
||||
<NameSpace name="ViewportDownloadForm" />
|
||||
@@ -0,0 +1,2 @@
|
||||
import ViewportDownloadForm from './ViewportDownloadForm';
|
||||
export { ViewportDownloadForm };
|
||||
@@ -1,27 +1,35 @@
|
||||
import { StudyBrowser, ThumbnailEntry } from './studyBrowser';
|
||||
import { StudyBrowser, Thumbnail } from './studyBrowser';
|
||||
import { LayoutButton, LayoutChooser } from './layoutButton';
|
||||
import { MeasurementTable, MeasurementTableItem } from './measurementTable';
|
||||
import { Overlay, OverlayTrigger } from './overlayTrigger';
|
||||
import { TableList, TableListItem } from './tableList';
|
||||
import {
|
||||
AboutModal,
|
||||
AboutContent,
|
||||
UserPreferences,
|
||||
UserPreferencesModal,
|
||||
} from './userPreferencesModal';
|
||||
UserPreferencesForm,
|
||||
} from './userPreferencesForm';
|
||||
|
||||
import { Checkbox } from './checkbox';
|
||||
import { CineDialog } from './cineDialog';
|
||||
import { ViewportDownloadForm } from './content/viewportDownloadForm';
|
||||
import { QuickSwitch } from './quickSwitch';
|
||||
import { RoundedButtonGroup } from './roundedButtonGroup';
|
||||
import { SelectTree } from './selectTree';
|
||||
import { SimpleDialog } from './simpleDialog';
|
||||
import { StudyList } from './studyList';
|
||||
import { OHIFModal } from './ohifModal';
|
||||
import {
|
||||
PageToolbar,
|
||||
StudyList,
|
||||
TableSearchFilter,
|
||||
TablePagination,
|
||||
} from './studyList';
|
||||
import { ToolbarSection } from './toolbarSection';
|
||||
import { Tooltip } from './tooltip';
|
||||
|
||||
export {
|
||||
Checkbox,
|
||||
CineDialog,
|
||||
ViewportDownloadForm,
|
||||
LayoutButton,
|
||||
LayoutChooser,
|
||||
MeasurementTable,
|
||||
@@ -30,16 +38,20 @@ export {
|
||||
OverlayTrigger,
|
||||
QuickSwitch,
|
||||
RoundedButtonGroup,
|
||||
PageToolbar,
|
||||
SelectTree,
|
||||
SimpleDialog,
|
||||
StudyBrowser,
|
||||
StudyList,
|
||||
TableList,
|
||||
TableListItem,
|
||||
ThumbnailEntry,
|
||||
Thumbnail,
|
||||
TableSearchFilter,
|
||||
TablePagination,
|
||||
ToolbarSection,
|
||||
Tooltip,
|
||||
AboutModal,
|
||||
AboutContent,
|
||||
UserPreferences,
|
||||
UserPreferencesModal,
|
||||
UserPreferencesForm,
|
||||
OHIFModal,
|
||||
};
|
||||
@@ -30,6 +30,11 @@
|
||||
.measurementLocation
|
||||
margin-left: 9px;
|
||||
margin-top: 9px;
|
||||
overflow: hidden;
|
||||
max-width: calc(100% - 50px);
|
||||
text-overflow: ellipsis;
|
||||
overflow-wrap: normal;
|
||||
white-space: nowrap;
|
||||
|
||||
.measurementDisplayText
|
||||
display: inline-block;
|
||||
|
||||
@@ -0,0 +1,68 @@
|
||||
import React from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import ReactBootstrapModal from 'react-bootstrap-modal';
|
||||
import classNames from 'classnames';
|
||||
|
||||
const OHIFModal = ({
|
||||
className,
|
||||
closeButton,
|
||||
backdrop,
|
||||
keyboard,
|
||||
show,
|
||||
title,
|
||||
onHide,
|
||||
footer: Footer,
|
||||
header: Header,
|
||||
children,
|
||||
}) => (
|
||||
<ReactBootstrapModal
|
||||
className={classNames('modal fade themed in', className)}
|
||||
backdrop={backdrop}
|
||||
keyboard={keyboard}
|
||||
show={show}
|
||||
large={true}
|
||||
title={title}
|
||||
onHide={onHide}
|
||||
>
|
||||
{(Header || title) && (
|
||||
<ReactBootstrapModal.Header closeButton={closeButton}>
|
||||
{title && (
|
||||
<ReactBootstrapModal.Title>{title}</ReactBootstrapModal.Title>
|
||||
)}
|
||||
{Header && <Header hide={onHide} />}
|
||||
</ReactBootstrapModal.Header>
|
||||
)}
|
||||
<ReactBootstrapModal.Body>{children}</ReactBootstrapModal.Body>
|
||||
{Footer && (
|
||||
<ReactBootstrapModal.Footer>
|
||||
<Footer hide={onHide} />
|
||||
</ReactBootstrapModal.Footer>
|
||||
)}
|
||||
</ReactBootstrapModal>
|
||||
);
|
||||
|
||||
OHIFModal.propTypes = {
|
||||
className: PropTypes.string,
|
||||
closeButton: PropTypes.bool,
|
||||
backdrop: PropTypes.bool,
|
||||
keyboard: PropTypes.bool,
|
||||
show: PropTypes.bool,
|
||||
title: PropTypes.string,
|
||||
onHide: PropTypes.func,
|
||||
footer: PropTypes.oneOfType([
|
||||
PropTypes.arrayOf(PropTypes.node),
|
||||
PropTypes.node,
|
||||
PropTypes.func,
|
||||
]),
|
||||
header: PropTypes.oneOfType([
|
||||
PropTypes.arrayOf(PropTypes.node),
|
||||
PropTypes.node,
|
||||
PropTypes.func,
|
||||
]),
|
||||
children: PropTypes.oneOfType([
|
||||
PropTypes.arrayOf(PropTypes.node),
|
||||
PropTypes.node,
|
||||
]).isRequired,
|
||||
};
|
||||
|
||||
export default OHIFModal;
|
||||
@@ -0,0 +1,39 @@
|
||||
---
|
||||
name: OHIFModal
|
||||
menu: Components
|
||||
route: /components/ohif-modal
|
||||
---
|
||||
|
||||
import { Playground, Props } from 'docz'
|
||||
import { State } from 'react-powerplug'
|
||||
import { OHIFModal } from './../index'
|
||||
import NameSpace from '../../../__docs__/NameSpace'
|
||||
|
||||
# OHIF Modal
|
||||
|
||||
## Basic usage
|
||||
|
||||
<Playground>
|
||||
<State
|
||||
initial={{}}
|
||||
>
|
||||
{({ state, setState }) => (
|
||||
<React.Fragment>
|
||||
<div>
|
||||
<pre>{JSON.stringify(state, null, 2)}</pre>
|
||||
</div>
|
||||
<div style={{ maxWidth: '400px', margin: '0 auto' }}>
|
||||
<OHIFModal />
|
||||
</div>
|
||||
</React.Fragment>
|
||||
)}
|
||||
</State>
|
||||
</Playground>
|
||||
|
||||
## API
|
||||
|
||||
<Props of={OHIFModal} />
|
||||
|
||||
## Translation Namespace
|
||||
|
||||
<NameSpace name="OHIFModal" />
|
||||
@@ -0,0 +1,2 @@
|
||||
import OHIFModal from './OHIFModal';
|
||||
export { OHIFModal };
|
||||
@@ -45,7 +45,7 @@
|
||||
.thumbnails-wrapper
|
||||
transform-origin: 0% 0%
|
||||
|
||||
.ThumbnailEntry
|
||||
.thumbnail
|
||||
float: left
|
||||
|
||||
.series-item
|
||||
@@ -98,7 +98,7 @@
|
||||
transition: transform 0.3s ease
|
||||
transform-origin: 100% 0%
|
||||
|
||||
.ThumbnailEntry
|
||||
.thumbnail
|
||||
float: right
|
||||
|
||||
.series-details
|
||||
@@ -179,7 +179,7 @@
|
||||
.thumbnails-wrapper
|
||||
transform: scale(1) translateY(0)
|
||||
|
||||
.ThumbnailEntry .series-details
|
||||
.thumbnail .series-details
|
||||
opacity: 1
|
||||
transform: translateY(0)
|
||||
transition-delay: 0.3s
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
import React, { Component } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
|
||||
import { ThumbnailEntry } from './../studyBrowser';
|
||||
import { Thumbnail } from './../studyBrowser';
|
||||
import './SeriesList.styl';
|
||||
|
||||
export class SeriesList extends Component {
|
||||
@@ -24,7 +24,7 @@ export class SeriesList extends Component {
|
||||
getSeriesItems = () => {
|
||||
return this.props.seriesItems.map((seriesData, index) => {
|
||||
return (
|
||||
<ThumbnailEntry
|
||||
<Thumbnail
|
||||
key={seriesData.displaySetInstanceUid}
|
||||
id={`series_thumb_${index}`}
|
||||
{...seriesData}
|
||||
|
||||
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Show more
Reference in new issue
Block a user