chore(release): publish [skip ci]

- @ohif/extension-vtk@0.50.3
 - @ohif/core@0.50.2
 - @ohif/viewer@0.50.6

.babelrc

@@ -1,19 +0,0 @@
-{
-  "presets": [
-    [
-      "@babel/preset-env",
-      {
-        "targets": {
-          "ie": "11"
-        }
-      }
-    ],
-    "@babel/preset-react"
-  ],
-  "plugins": [
-    "@babel/plugin-proposal-class-properties",
-    "@babel/plugin-syntax-dynamic-import",
-    "@babel/plugin-transform-regenerator",
-    "@babel/plugin-transform-runtime"
-  ]
-}

.circleci/config.yml

@@ -1,4 +1,4 @@
-version: 2
+version: 2.1
 
 ### ABOUT
 #
@@ -9,17 +9,29 @@ version: 2
 # create pull request previews and to update `https://docs.ohif.org`
 ###
 
+orbs:
+  codecov: codecov/codecov@1.0.5
+  cypress: cypress-io/cypress@1.8.0
+
 defaults: &defaults
-  working_directory: ~/repo
   docker:
-    - image: circleci/node:10.15.1
+    - image: circleci/node:10.16.0
+      environment:
+        TERM: xterm # Enable colors in term
+  working_directory: ~/repo
 
 jobs:
-  build_and_test:
+  PR_UNIT_TESTS:
     <<: *defaults
+
     steps:
-      # Download and cache dependencies
-      - checkout
+      # Enable yarn workspaces
+      - run: yarn config set workspaces-experimental true
+
+      # Checkout code and ALL Git Tags
+      - checkout:
+          post:
+            - git fetch --all
       - restore_cache:
           name: Restore Yarn and Cypress Package Cache
           keys:
@@ -35,34 +47,56 @@ jobs:
           paths:
             - ~/.cache ## Cache yarn and Cypress
           key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
-      # Build & Test
-      - run: yarn build:package:ci
-      # https://www.viget.com/articles/using-junit-on-circleci-2-0-with-jest-and-eslint/
+
+      # RUN TESTS
       - run:
           name: 'JavaScript Test Suite'
-          command: yarn test:unit:ci
-          environment:
-            JEST_JUNIT_OUTPUT: 'reports/junit/js-test-results.xml'
-      # Store result
-      - store_test_results:
-          path: reports/junit
-      - store_artifacts:
-          path: reports/junit
+          command: yarn run test:unit:ci
+
+      # PLATFORM/VIEWER
+      - run:
+          name: 'VIEWER: Combine report output'
+          command: |
+            viewerCov="/home/circleci/repo/platform/viewer/coverage"
+            touch "${viewerCov}/reports"
+            cat "${viewerCov}/clover.xml" >> "${viewerCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
+            cat "${viewerCov}/lcov.info" >>"${viewerCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
+      - codecov/upload:
+          file: '/home/circleci/repo/platform/viewer/coverage/reports'
+          flags: 'viewer'
+
+      # PLATFORM/CORE
+      - run:
+          name: 'CORE: Combine report output'
+          command: |
+            coreCov="/home/circleci/repo/platform/core/coverage"
+            touch "${coreCov}/reports"
+            cat "${coreCov}/clover.xml" >> "${coreCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
+            cat "${coreCov}/lcov.info" >> "${coreCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
+      - codecov/upload:
+          file: '/home/circleci/repo/platform/core/coverage/reports'
+          flags: 'core'
+
       # Persist :+1:
       - persist_to_workspace:
           root: ~/repo
           paths: .
 
-  e2e_test:
-    working_directory: ~/repo
-    docker:
-      - image: cypress/base:8
-        environment:
-          ## this enables colors in the output
-          TERM: xterm
+  MERGE_UNIT_TESTS:
+    <<: *defaults
+
     steps:
-      - attach_workspace:
-          at: ~/repo
+      # Enable yarn workspaces
+      - run: yarn config set workspaces-experimental true
+
+      # Checkout code and ALL Git Tags
+      - checkout:
+          post:
+            - git fetch --all
       - restore_cache:
           name: Restore Yarn and Cypress Package Cache
           keys:
@@ -70,11 +104,52 @@ jobs:
             - yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
             - yarn-packages-v1-{{ .Branch }}-
             - yarn-packages-v1-
-      # - run: $(yarn bin)/cypress run --record
-      # Shouldn't be needed if we're using a package cache that contains Cypress
-      # Could do a check here, if it doesn't exist, install cypress?
-      - run: yarn install
-      - run: yarn run test:e2e:ci
+      - run:
+          name: Install Dependencies
+          command: yarn install --frozen-lockfile
+      - save_cache:
+          name: Save Yarn Package Cache
+          paths:
+            - ~/.cache ## Cache yarn and Cypress
+          key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
+
+      # RUN TESTS
+      - run:
+          name: 'JavaScript Test Suite'
+          command: yarn run test:unit:ci
+
+      # PLATFORM/VIEWER
+      - run:
+          name: 'VIEWER: Combine report output'
+          command: |
+            viewerCov="/home/circleci/repo/platform/viewer/coverage"
+            touch "${viewerCov}/reports"
+            cat "${viewerCov}/clover.xml" >> "${viewerCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
+            cat "${viewerCov}/lcov.info" >>"${viewerCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
+      - codecov/upload:
+          file: '/home/circleci/repo/platform/viewer/coverage/reports'
+          flags: 'viewer'
+
+      # PLATFORM/CORE
+      - run:
+          name: 'CORE: Combine report output'
+          command: |
+            coreCov="/home/circleci/repo/platform/core/coverage"
+            touch "${coreCov}/reports"
+            cat "${coreCov}/clover.xml" >> "${coreCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
+            cat "${coreCov}/lcov.info" >> "${coreCov}/reports"
+            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
+      - codecov/upload:
+          file: '/home/circleci/repo/platform/core/coverage/reports'
+          flags: 'core'
+
+      # Persist :+1:
+      - persist_to_workspace:
+          root: ~/repo
+          paths: .
 
   npm_publish:
     <<: *defaults
@@ -86,11 +161,15 @@ jobs:
           command:
             mkdir ~/.ssh/ && echo -e "Host github.com\n\tStrictHostKeyChecking
             no\n" > ~/.ssh/config
-      # --no-ci argument is not ideal; however, semantic-rlease thinks we're
-      # attempting to run it from a `pr`, which is not the case
+      - run: git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
+      - run: git config --global user.name "ohif-bot"
       - run:
-          name: Publish using Semantic Release
-          command: npx semantic-release --debug
+          name: Authenticate with registry
+          command:
+            echo "//registry.npmjs.org/:_authToken=$NPM_TOKEN" > ~/repo/.npmrc
+      - run: npx lerna version
+      - run: npx lerna publish from-package
+
       # Persist :+1:
       - persist_to_workspace:
           root: ~/repo
@@ -106,8 +185,8 @@ jobs:
           command:
             mkdir ~/.ssh/ && echo -e "Host github.com\n\tStrictHostKeyChecking
             no\n" > ~/.ssh/config
-      - run: git config --global user.email "gh-pages@localhost"
-      - run: git config --global user.name "npm gh-pages"
+      - run: git config --global user.email "danny.ri.brown+ohif-bot@gmail.com"
+      - run: git config --global user.name "ohif-bot"
       - run: yarn global add gh-pages
       - run:
           name: Generate Docs
@@ -145,26 +224,11 @@ jobs:
               docker push ohif/$IMAGE_NAME:latest
             fi
 
-  build_demo_site:
+  deploy_demo_site:
     <<: *defaults
     steps:
-      # Download and cache dependencies
-      - checkout
-      - restore_cache:
-          name: Restore Yarn Package Cache
-          keys:
-            # when lock file changes, use increasingly general patterns to restore cache
-            - yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
-            - yarn-packages-v1-{{ .Branch }}-
-            - yarn-packages-v1-
-      - run:
-          name: Install Dependencies
-          command: yarn install --frozen-lockfile
-      - save_cache:
-          name: Save Yarn Package Cache
-          paths:
-            - ~/.cache/yarn
-          key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
+      - attach_workspace:
+          at: ~/repo
       # Build & Test
       - run:
           name: 'Build Demo Site, Upload SourceMaps, Send Deploy Notification'
@@ -212,42 +276,71 @@ workflows:
   version: 2
 
   # PULL REQUESTS
-  pull_requests:
+  PR_CHECKS:
     jobs:
-      - build_and_test:
+      - PR_UNIT_TESTS:
           filters:
             branches:
               ignore:
                 - master
                 - feature/*
                 - hotfix/*
+      # Cypress job added by `cypress-io` orb
+      - cypress/run:
+          pre-steps:
+            - run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v' # Use yarn latest
+          yarn: true
+          store_artifacts: true
+          start: yarn run dev
+          wait-on: 'http://localhost:3000'
+          no-workspace: true # Don't persist workspace
+          working_directory: platform/viewer
+          cache-key: 'yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}'
+          post-steps:
+            - store_test_results:
+                path: cypress/results
+          requires:
+            - PR_UNIT_TESTS
 
   # MERGE TO MASTER
-  cut_release:
+  RELEASE:
     jobs:
-      - build_and_test:
+      - MERGE_UNIT_TESTS:
           filters:
             branches:
               only: master
-      - e2e_test:
+      # Cypress job added by `cypress-io` orb
+      - cypress/run:
+          pre-steps:
+            - run: 'rm -rf ~/.yarn && npm i -g yarn && yarn -v' # Use yarn latest
+          yarn: true
+          record: true
+          store_artifacts: true
+          start: yarn run dev
+          wait-on: 'http://localhost:3000'
+          working_directory: platform/viewer
+          cache-key: 'yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}'
+          post-steps:
+            - store_test_results:
+                path: cypress/results
           requires:
-            - build_and_test
+            - MERGE_UNIT_TESTS
       # Update NPM
       - npm_publish:
           requires:
-            - e2e_test
+            - cypress/run
       # Update docs.ohif.org
-      - docs_publish:
-          requires:
-            - e2e_test
+      # - docs_publish:
+      #     requires:
+      #       - cypress/run
       # Update hub.docker.org
-      - docker_publish:
-          requires:
-            - npm_publish
+      # - docker_publish:
+      #     requires:
+      #       - npm_publish
       # Update viewer.ohif.org
-      - build_demo_site:
-          requires:
-            - e2e_test
-      - demo_site_publish:
-          requires:
-            - build_demo_site
+      # - build_demo_site:
+      #     requires:
+      #       - cypress/run
+      # - demo_site_publish:
+      #     requires:
+      #       - build_demo_site

.codecov.yml

@@ -9,4 +9,15 @@ coverage:
     project:
       default:
         threshold: 0.10%
+      core:
+        flags: core
+      viewer:
+        flags: viewer
     patch: off
+flags:
+  core:
+    paths:
+      - platform/core
+  viewer:
+    paths:
+      - platform/viewer

.eslintrc.json

@@ -1,5 +1,10 @@
 {
-  "extends": ["react-app", "eslint:recommended", "plugin:react/recommended"],
+  "extends": [
+    "react-app",
+    "eslint:recommended",
+    "plugin:react/recommended",
+    "plugin:prettier/recommended"
+  ],
   "parser": "babel-eslint",
   "env": {
     "jest": true

.gitattributes

@@ -1,39 +0,0 @@
-# These settings are for any web project
-
-# Handle line endings automatically for files detected as text
-# and leave all files detected as binary untouched.
-* text=auto
-
-# Force the following filetypes to have unix eols, so Windows does not break them
-*.* text eol=lf
-
-# Windows forced line-endings
-/.idea/* text eol=crlf
-
-#
-## These files are binary and should be left untouched
-#
-
-# (binary is a macro for -text -diff)
-*.png binary
-*.jpg binary
-*.jpeg binary
-*.gif binary
-*.ico binary
-*.mov binary
-*.mp4 binary
-*.mp3 binary
-*.flv binary
-*.fla binary
-*.swf binary
-*.gz binary
-*.zip binary
-*.7z binary
-*.ttf binary
-*.eot binary
-*.woff binary
-*.pyc binary
-*.pdf binary
-*.ez binary
-*.bz2 binary
-*.swp binary

.github/ISSUE_TEMPLATE/---bug-report.md

@@ -0,0 +1,39 @@
+---
+name: "\U0001F41B Bug report"
+about: Create a report to help us improve
+title: ''
+labels: 'Bug Report :bug:'
+assignees: ''
+---
+
+**Before Creating an issue**
+
+- Are you running the latest version?
+- Are you reporting to the correct repository?
+- Did you search existing issues?
+
+**Describe the bug**
+
+_A clear and concise description of what the bug is._
+
+**Steps To Reproduce**
+
+1. [First Step]
+2. [Second Step]
+3. ...
+
+```
+Please use code blocks to show formatted errors or code snippets
+```
+
+**Expected behavior**
+
+_A clear and concise description of what you expected to happen._
+
+**Environment**
+
+- OS: [e.g. iOS]
+- Browser [e.g. chrome, safari]
+- Version [e.g. 22]
+
+**Additional context**

.github/ISSUE_TEMPLATE/---feature-request.md

@@ -0,0 +1,19 @@
+---
+name: "\U0001F680 Feature request"
+about: Suggest an idea for this project
+title: ''
+labels: enhancement
+assignees: ''
+---
+
+<!-- ## Awesome, do you have an idea? 😍
+
+If you have a **feature request, improvement or idea**, check [our official roadmap](https://github.com/OHIF/react-viewerbase/projects) to see if it is already planned! -->
+
+<!-- ### 👉 &nbsp; [Go to Roadmap](https://github.com/OHIF/react-viewerbase/projects)
+
+If your feature request isn't there, continue with this issue and we can discuss
+it 🤟 -->
+
+Please include the reasons why you think your change should be made, and any
+supporting evidence that helps us asses its value and priority.

.github/ISSUE_TEMPLATE/---support-question.md

@@ -0,0 +1,18 @@
+---
+name: "\U0001F917 Support Question"
+about: "I have a question \U0001F4AC"
+title: ''
+labels: question
+assignees: ''
+---
+
+We are a small team with limited resources. Your question is much more likely to
+be answered if it is
+[a good question](https://stackoverflow.com/help/how-to-ask)
+
+**Description**
+
+Questions can often be answered by our documentation. Unable to find an answer
+in our docs? We'll try to help. In the meantime, if you answer your own
+question, please respond with the answer here so that others may benefit as
+well. Better yet, open a PR to expand our docs ^\_^

.gitignore

@@ -8,6 +8,7 @@ docs/_book
 src/version.js
 junit.xml
 coverage/
+.docz/
 
 # YALC (for Erik)
 .yalc
@@ -28,3 +29,6 @@ docker/dcm4che/dcm4che-arc
 
 # Cypress test results
 cypress/videos/
+
+# Locize settings
+.locize

.jscsrc

@@ -1,45 +0,0 @@
-{
-    "requireCurlyBraces": {
-        "keywords": [ "if", "else", "for", "while", "do" ],
-        "allExcept" : ["return" , "continue", "break"]
-    },
-    "requireSpaceAfterKeywords": [ "if", "else", "for", "while", "do", "switch", "return" ],
-    "requireSpacesInFunctionExpression": {
-        "beforeOpeningCurlyBrace": true
-    },
-    "disallowSpacesInFunctionExpression": {
-        "beforeOpeningRoundBrace": true
-    },
-    "disallowSpacesInsideParentheses": true,
-    "disallowKeywordsOnNewLine": ["else"],
-    "disallowNewlineBeforeBlockStatements": true,
-    "requirePaddingNewLinesAfterUseStrict": true,
-    "requirePaddingNewLinesAfterBlocks": {
-        "allExcept": ["inCallExpressions", "inArrayExpressions", "inProperties"]
-    },
-    "requireObjectKeysOnNewLine": true,
-    "requireSemicolons": true,
-    "requireSpaceAfterBinaryOperators": true,
-    "requireSpaceAfterComma": true,
-    "requireSpaceBeforeObjectValues": true,
-    "requireSpacesInsideObjectBrackets": "all",
-    "requireLineBreakAfterVariableAssignment": true,
-    "requireSpaceBeforeBinaryOperators": ["+", "-", "/", "*", "=", "==", "===", "!=", "!=="],
-    "disallowSpaceAfterPrefixUnaryOperators": ["++", "--", "+", "-"],
-    "disallowSpaceBeforePostfixUnaryOperators": ["++", "--"],
-    "disallowKeywords": [ "with" ],
-    "disallowMultipleLineBreaks": true,
-    "requireLineFeedAtFileEnd": true,
-    "disallowSpaceAfterObjectKeys": true,
-    "disallowQuotedKeysInObjects": true,
-    "disallowMultipleSpaces": true,
-    "disallowVar": true,
-    "validateLineBreaks": "LF",
-    "validateIndentation": 4,
-    "validateQuoteMarks": {
-        "mark": "'",
-        "escape": true
-    },
-    "validateParameterSeparator": ", ",
-    "requireDollarBeforejQueryAssignment": true
-}

.jshintrc

@@ -1,93 +0,0 @@
-{
-    // JSHint Default Configuration File (as on JSHint website)
-    // See http://jshint.com/docs/ for more details
-
-    "maxerr"        : 50,       // {int} Maximum error before stopping
-
-    // Enforcing
-    "bitwise"       : true,     // true: Prohibit bitwise operators (&, |, ^, etc.)
-    "camelcase"     : false,    // true: Identifiers must be in camelCase
-    "curly"         : false,     // true: Require {} for every new block or scope
-    "eqeqeq"        : true,     // true: Require triple equals (===) for comparison
-    "forin"         : true,     // true: Require filtering for..in loops with obj.hasOwnProperty()
-    "freeze"        : true,     // true: prohibits overwriting prototypes of native objects such as Array, Date etc.
-    "immed"         : false,    // true: Require immediate invocations to be wrapped in parens e.g. `(function () { } ());`
-    "latedef"       : false,    // true: Require variables/functions to be defined before being used
-    "newcap"        : false,    // true: Require capitalization of all constructor functions e.g. `new F()`
-    "noarg"         : true,     // true: Prohibit use of `arguments.caller` and `arguments.callee`
-    "noempty"       : true,     // true: Prohibit use of empty blocks
-    "nonbsp"        : true,     // true: Prohibit "non-breaking whitespace" characters.
-    "nonew"         : false,    // true: Prohibit use of constructors for side-effects (without assignment)
-    "plusplus"      : false,    // true: Prohibit use of `++` and `--`
-    "quotmark"      : false,    // Quotation mark consistency:
-                                //   false    : do nothing (default)
-                                //   true     : ensure whatever is used is consistent
-                                //   "single" : require single quotes
-                                //   "double" : require double quotes
-    "undef"         : true,     // true: Require all non-global variables to be declared (prevents global leaks)
-    "unused"        : "vars",   // Unused variables:
-                                //   true     : all variables, last function parameter
-                                //   "vars"   : all variables only
-                                //   "strict" : all variables, all function parameters
-    "strict"        : false,    // true: Requires all functions run in ES5 Strict Mode
-    "maxparams"     : false,    // {int} Max number of formal params allowed per function
-    "maxdepth"      : false,    // {int} Max depth of nested blocks (within functions)
-    "maxstatements" : false,    // {int} Max number statements per function
-    "maxcomplexity" : false,    // {int} Max cyclomatic complexity per function
-    "maxlen"        : false,    // {int} Max number of characters per line
-    "varstmt"       : false,    // true: Disallow any var statements. Only `let` and `const` are allowed.
-
-    // Relaxing
-    "asi"           : false,     // true: Tolerate Automatic Semicolon Insertion (no semicolons)
-    "boss"          : false,     // true: Tolerate assignments where comparisons would be expected
-    "debug"         : false,     // true: Allow debugger statements e.g. browser breakpoints.
-    "eqnull"        : false,     // true: Tolerate use of `== null`
-    "es5"           : true,      // true: Allow ES5 syntax (ex: getters and setters)
-    "esnext"        : true,      // true: Allow ES.next (ES6) syntax (ex: `const`)
-    "moz"           : false,     // true: Allow Mozilla specific syntax (extends and overrides esnext features)
-                                 // (ex: `for each`, multiple try/catch, function expression…)
-    "evil"          : false,     // true: Tolerate use of `eval` and `new Function()`
-    "expr"          : false,     // true: Tolerate `ExpressionStatement` as Programs
-    "funcscope"     : false,     // true: Tolerate defining variables inside control statements
-    "globalstrict"  : false,     // true: Allow global "use strict" (also enables 'strict')
-    "iterator"      : false,     // true: Tolerate using the `__iterator__` property
-    "lastsemic"     : false,     // true: Tolerate omitting a semicolon for the last statement of a 1-line block
-    "laxbreak"      : false,     // true: Tolerate possibly unsafe line breakings
-    "laxcomma"      : false,     // true: Tolerate comma-first style coding
-    "loopfunc"      : false,     // true: Tolerate functions being defined in loops
-    "multistr"      : false,     // true: Tolerate multi-line strings
-    "noyield"       : false,     // true: Tolerate generator functions with no yield statement in them.
-    "notypeof"      : false,     // true: Tolerate invalid typeof operator values
-    "proto"         : false,     // true: Tolerate using the `__proto__` property
-    "scripturl"     : false,     // true: Tolerate script-targeted URLs
-    "shadow"        : false,     // true: Allows re-define variables later in code e.g. `var x=1; x=2;`
-    "sub"           : false,     // true: Tolerate using `[]` notation when it can still be expressed in dot notation
-    "supernew"      : false,     // true: Tolerate `new function () { ... };` and `new Object;`
-    "validthis"     : false,     // true: Tolerate using this in a non-constructor function
-
-    // Environments
-    "browser"       : true,     // Web Browser (window, document, etc)
-    "browserify"    : false,    // Browserify (node.js code in the browser)
-    "couch"         : false,    // CouchDB
-    "devel"         : false,    // Development/debugging (alert, confirm, etc)
-    "dojo"          : false,    // Dojo Toolkit
-    "jasmine"       : false,    // Jasmine
-    "jquery"        : true,     // jQuery
-    "mocha"         : false,    // Mocha
-    "mootools"      : false,    // MooTools
-    "node"          : false,    // Node.js
-    "nonstandard"   : false,    // Widely adopted globals (escape, unescape, etc)
-    "phantom"       : false,    // PhantomJS
-    "prototypejs"   : false,    // Prototype and Scriptaculous
-    "qunit"         : false,    // QUnit
-    "rhino"         : false,    // Rhino
-    "shelljs"       : false,    // ShellJS
-    "typed"         : false,    // Globals for typed array constructions
-    "worker"        : false,    // Web Workers
-    "wsh"           : false,    // Windows Scripting Host
-    "yui"           : false,    // Yahoo User Interface
-    "globals"       : {
-        "require": true,
-        "Package": true         // Meteor Package definition
-    }
-}

.netlify/build-deploy-preview.sh

@@ -0,0 +1,30 @@
+#!/bin/bash
+
+# Set directory to location of this script
+# https://stackoverflow.com/a/3355423/1867984
+cd "$(dirname "$0")"
+cd .. # Up to project root
+
+# Helpful to verify which versions we're using
+yarn -v
+node -v
+
+# Install build deps and all monorepo package dependencies. Yarn Workspaces
+# should also symlink all projects appropriately
+yarn install --no-ignore-optional --pure-lockfile
+
+dir
+ls
+
+# Build && Move PWA Output
+yarn run build:ci
+mkdir -p ./.netlify/www/pwa
+mv platform/viewer/dist/* .netlify/www/pwa -v
+
+# Build && Move script output
+# yarn run build:package
+
+echo 'Nothing left to see here. Go home, folks.'
+
+# Build using react-scripts
+# npx cross-env PUBLIC_URL=/demo APP_CONFIG=config/netlify.js react-scripts --max_old_space_size=4096 build

.netlify/www/index.html

@@ -0,0 +1,14 @@
+<html>
+  <head>
+    <title>OHIF Viewer: Deploy Preview</title>
+  </head>
+  <body>
+    <h1>Index of Previews</h1>
+
+    <ul>
+      <li>
+        <a href="/pwa">Progressive Web App</a>
+      </li>
+    </ul>
+  </body>
+</html>

.prettierrc

@@ -4,6 +4,5 @@
   "proseWrap": "always",
   "tabWidth": 2,
   "semi": true,
-  "singleQuote": true,
-  "endOfLine": "lf"
+  "singleQuote": true
 }

.releaserc

@@ -1,14 +0,0 @@
-{
-  "plugins": [
-    "@semantic-release/commit-analyzer",
-    "@semantic-release/release-notes-generator",
-    "@semantic-release/npm",
-    "@semantic-release/github",
-    [
-      "@semantic-release/exec",
-      {
-        "publishCmd": "mkdir tmp && echo ${nextRelease.version} > tmp/updated-version.txt"
-      }
-    ]
-  ]
-}

.scripts/dev.sh

@@ -0,0 +1,14 @@
+#!/bin/bash
+# https://github.com/shelljs/shelljs
+# https://github.com/shelljs/shelljs#exclude-options
+PROJECT=$1
+
+if [ -z "$PROJECT" ]
+then
+  # Default
+  npx lerna run dev:viewer
+else
+  eval "npx lerna run dev:$PROJECT"
+fi
+
+read -p 'Press [Enter] key to continue...'

.vscode/settings.json

@@ -1,30 +1,30 @@
 {
-    "editor.rulers": [80, 120],
-  
-    // ===
-    // Spacing
-    // ===
-  
-    "editor.insertSpaces": true,
-    "editor.tabSize": 2,
-    "editor.trimAutoWhitespace": true,
-    "files.trimTrailingWhitespace": true,
-    "files.eol": "\n",
-    "files.insertFinalNewline": true,
-    "files.trimFinalNewlines": true,
-  
-    // ===
-    // Event Triggers
-    // ===
-  
-    "editor.formatOnSave": true,
-    "eslint.autoFixOnSave": true,
-    "eslint.run": "onSave",
-    "eslint.validate": [
-      { "language": "javascript", "autoFix": true },
-      { "language": "javascriptreact", "autoFix": true }
-    ],
-    "prettier.disableLanguages": [],
-    "prettier.endOfLine": "lf"
-  }
-  
+  "editor.rulers": [80, 120],
+
+  // ===
+  // Spacing
+  // ===
+
+  "editor.insertSpaces": true,
+  "editor.tabSize": 2,
+  "editor.trimAutoWhitespace": true,
+  "files.trimTrailingWhitespace": true,
+  "files.eol": "\n",
+  "files.insertFinalNewline": true,
+  "files.trimFinalNewlines": true,
+
+  // ===
+  // Event Triggers
+  // ===
+
+  "editor.formatOnSave": true,
+  "eslint.autoFixOnSave": true,
+  "eslint.run": "onSave",
+  "eslint.validate": [
+    { "language": "javascript", "autoFix": true },
+    { "language": "javascriptreact", "autoFix": true }
+  ],
+  "prettier.disableLanguages": [],
+  "prettier.endOfLine": "lf",
+  "workbench.colorCustomizations": {}
+}

.webpack/webpack.common.js

@@ -0,0 +1,127 @@
+const path = require('path');
+const webpack = require('webpack');
+const autoprefixer = require('autoprefixer');
+// const ExtractCssChunks = require('extract-css-chunks-webpack-plugin');
+
+module.exports = (env, argv, { SRC_DIR, DIST_DIR }) => {
+  return {
+    entry: {
+      bundle: `${SRC_DIR}/index.js`,
+    },
+    context: SRC_DIR,
+    module: {
+      rules: [
+        /**
+         * JSX
+         */
+        {
+          test: /\.jsx?$/,
+          exclude: [/node_modules/, /packages\\extension/],
+          loader: 'babel-loader',
+          options: {
+            // Find babel.config.js in monorepo root
+            // https://babeljs.io/docs/en/options#rootmode
+            rootMode: 'upward',
+            presets: [
+              [
+                '@babel/preset-env',
+                {
+                  // Do not transform ES6 modules to another format.
+                  // Webpack will take care of that.
+                  modules: false,
+                  targets: {
+                    ie: '11',
+                  },
+                  // https://babeljs.io/docs/en/babel-preset-env#usebuiltins
+                  useBuiltIns: 'usage',
+                  // https://babeljs.io/docs/en/babel-preset-env#corejs
+                  corejs: 3,
+                },
+              ],
+            ],
+          },
+        },
+        /**
+         * Stylus to CSS
+         * CSS to CommonJS
+         * Style nodes from JS Strings
+         */
+        {
+          test: /\.styl$/,
+          use: [
+            { loader: 'style-loader' },
+            { loader: 'css-loader' },
+            { loader: 'stylus-loader' },
+          ],
+        },
+        {
+          test: /\.css$/,
+          use: [
+            'style-loader',
+            // ExtractCssChunks.loader,
+            { loader: 'css-loader', options: { importLoaders: 1 } },
+            {
+              loader: 'postcss-loader',
+              options: {
+                config: {
+                  path: './postcss.config.js',
+                },
+                plugins: () => [autoprefixer('last 2 version', 'ie >= 11')],
+              },
+            },
+          ],
+        },
+        /**
+         * This allows us to include web workers in our bundle, and VTK.js
+         * web workers in our bundle. While this increases bundle size, it
+         * cuts down on the number of includes we need for `script tag` usage.
+         */
+        {
+          test: /\.worker\.js$/,
+          include: /vtk\.js[\/\\]Sources/,
+          use: [
+            {
+              loader: 'worker-loader',
+              options: { inline: true, fallback: false },
+            },
+          ],
+        },
+        /**
+         * This is exclusively used by `vtk.js` to bundle glsl files.
+         */
+        {
+          test: /\.glsl$/i,
+          include: /vtk\.js[\/\\]Sources/,
+          loader: 'shader-loader',
+        },
+      ],
+    },
+    resolve: {
+      // Which directories to search when resolving modules
+      modules: [
+        // Modules specific to this package
+        path.resolve(__dirname, '../node_modules'),
+        // Hoisted Yarn Workspace Modules
+        path.resolve(__dirname, '../../../node_modules'),
+        SRC_DIR,
+      ],
+      // Attempt to resolve these extensions in order.
+      extensions: ['.js', '.jsx', '.json', '*'],
+      // symlinked resources are resolved to their real path, not their symlinked location
+      symlinks: true,
+    },
+    plugins: [
+      new webpack.DefinePlugin({
+        'process.env.NODE_ENV': JSON.stringify(process.env.NODE_ENV),
+        'process.env.DEBUG': JSON.stringify(process.env.DEBUG),
+        'process.env.APP_CONFIG': JSON.stringify(process.env.APP_CONFIG || ''),
+        'process.env.PUBLIC_URL': JSON.stringify(process.env.PUBLIC_URL || ''),
+      }),
+    ],
+    // Fix: https://github.com/webpack-contrib/css-loader/issues/447#issuecomment-285598881
+    // For issue in cornerstone-wado-image-loader
+    node: {
+      fs: 'empty',
+    },
+  };
+};

LICENSE

@@ -1,6 +1,6 @@
-The MIT License (MIT)
+MIT License
 
-Copyright (c) 2015 Open Health Imaging Foundation
+Copyright (c) 2018 Open Health Imaging Foundation
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

README.md

@@ -1,8 +1,8 @@
 <!-- prettier-ignore-start -->
 <!-- markdownlint-disable -->
 <div align="center">
-  <h1>ohif-viewer</h1>
-  <p><strong>ohif-viewer</strong> is a zero-footprint medical image viewer provided by the <a href="http://ohif.org/">Open Health Imaging Foundation (OHIF)</a>. It is a configurable and extensible progressive web application with out-of-the-box support for image archives which support <a href="https://www.dicomstandard.org/dicomweb/">DICOMweb</a>.</p>
+  <h1>OHIF Medical Imaging Viewer</h1>
+  <p><strong>The OHIF Viewer</strong> is a zero-footprint medical image viewer provided by the <a href="http://ohif.org/">Open Health Imaging Foundation (OHIF)</a>. It is a configurable and extensible progressive web application with out-of-the-box support for image archives which support <a href="https://www.dicomstandard.org/dicomweb/">DICOMweb</a>.</p>
 </div>
 
 
@@ -19,218 +19,175 @@
 
 <hr />
 
-[![CircleCI][circleci-image]][circleci-url]
-[![codecov][codecov-image]][codecov-url]
-[![All Contributors](https://img.shields.io/badge/all_contributors-9-orange.svg?style=flat-square)](#contributors)
-[![code style: prettier][prettier-image]][prettier-url]
-[![semantic-release][semantic-image]][semantic-url]
-
 [![NPM version][npm-version-image]][npm-url]
 [![NPM downloads][npm-downloads-image]][npm-url]
 [![Pulls][docker-pulls-img]][docker-image-url]
 [![MIT License][license-image]][license-url]
-<!-- markdownlint-enable -->
-<!-- prettier-ignore-end -->
 
-> ATTENTION: If you are looking for Version 1 (the Meteor Version) of this
-> repository, it lives on
-> [the `v1.x` branch](https://github.com/OHIF/Viewers/tree/v1.x)
+[![Netlify Status][netlify-image]][netlify-url]
+[![CircleCI][circleci-image]][circleci-url]
+[![codecov][codecov-image]][codecov-url]
+[![All Contributors](https://img.shields.io/badge/all_contributors-10-orange.svg?style=flat-square)](#contributors)
 
-## Why?
+## What?
 
-Building a web based medical imaging viewer from scratch is time intensive, hard
-to get right, and expensive. Instead of re-inventing the wheel, you can use the
-OHIF Viewer as a rock solid platform to build on top of. The Viewer is a
-[React][react-url] [Progressive Web Application][pwa-url] that can be embedded
-in existing applications via it's [packaged source
-(ohif-viewer)][ohif-viewer-url] or hosted stand-alone. The Viewer exposes
-[configuration][configuration-url] and [extensions][extensions-url] to support
-workflow customization and advanced functionality at common integration points.
+The OHIF Medical Imaging Viewer is for viewing medical images. It can retrieve and load images from most sources and formats; render sets in 2D, 3D, and reconstructed representations; allows for the manipulation, annotation, and serialization of observations; supports internationalization, OpenID Connect, offline use, hotkeys, and many more features.
 
-If you're interested in using the OHIF Viewer, but you're not sure it supports
-your use case [check out our docs](https://docs.ohif.org/). Still not sure, or
-you would like to propose new features? Don't hesitate to
-[create an issue](https://github.com/OHIF/Viewers/issues) or open a pull
-request.
+Almost everything offers some degree of customization and configuration. If it doesn't support something you need, we accept pull requests and have an ever improving Extension System.
 
-## Getting Started
+## Why Choose Us
 
-This readme is specific to testing and developing locally. If you're more
-interested in production deployment strategies,
-[you can check out our documentation on publishing](https://docs.ohif.org/).
+### Community & Experience
 
-Want to play around before you dig in?
-[Check out our LIVE Demo](https://viewer.ohif.org/)
+The OHIF Viewer is a collaborative effort that has served as the basis for many active, production, and FDA Cleared medical imaging viewers. It benefits from our extensive community's collective experience, and from the sponsored contributions of individuals, research groups, and commercial organizations.
 
-### Setup
+### Built to Adapt
 
-_Requirements:_
+...
 
-- [NodeJS & NPM](https://nodejs.org/en/download/)
-- [Yarn](https://yarnpkg.com/lang/en/docs/install/)
 
-_Steps:_
+### Support
 
-1. Fork this repository
-2. Clone your forked repository (your `origin`)
+...
 
-- `git clone git@github.com:YOUR_GITHUB_USERNAME/Viewers.git`
+## Quick Start Deployment
 
-3. Add `OHIF/Viewers` as a `remote` repository (the `upstream`)
+> This is only one of many ways to configure and deploy the OHIF Viewer. To learn more about your options, and how to choose the best one for your requirements, check out [our deployment recipes and documentation](https://docs.ohif.org/deployment/).
 
-- `git remote add upstream git@github.com:OHIF/Viewers.git`
+The fastest and easiest way to get started is to include the OHIF Viewer with a script tag. In practice, this is as simple as:
 
-### Developing Locally
-
-In your cloned repository's root folder, run:
+- Including the following dependencies with script tags:
+   - [React](https://unpkg.com/react@16/umd/react.production.min.js)
+   - [React Dom](https://unpkg.com/react-dom@16/umd/react-dom.production.min.js)
+   - The [OHIF Viewer](https://unpkg.com/ohif-viewer@0.19.5/dist/index.umd.js)
+- Have an element with an ID of `root` on the page
+- Configure the OHIF Viewer at `window.config`:
 
 ```js
-// Restore dependencies
+window.config = {
+  routerBasename: "/",
+  servers: {
+    dicomWeb: [
+      {
+        name: "DCM4CHEE",
+        qidoRoot: "https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/rs",
+        wadoRoot: "https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/rs",
+        qidoSupportsIncludeField: true,
+        imageRendering: "wadors",
+        thumbnailRendering: "wadors"
+      }
+    ]
+  }
+};
+```
+
+- Install the viewer: `window.OHIFStandaloneViewer.installViewer(window.config);`
+
+This exact setup is demonstrated in this [CodeSandbox](https://codesandbox.io/s/ohif-viewer-script-tag-usage-c4u4t) and in our [Embedding The Viewer](https://docs.ohif.org/deployment/recipes/embedded-viewer.html) deployment recipe.
+
+## Developing
+
+### Requirements
+
+- [Yarn 1.17.3+](https://yarnpkg.com/en/docs/install)
+- [Node 8+](https://nodejs.org/en/)
+- Yarn Workspaces should be enabled on your machine:
+  - `yarn config set workspaces-experimental true`
+
+### Getting Started
+
+1. [Fork this repository][how-to-fork]
+2. [Clone your forked repository][how-to-clone]
+   - `git clone https://github.com/YOUR-USERNAME/Viewers.git`
+3. Navigate to the cloned project's directory
+4. Add this repo as a `remote` named `upstream`
+   - `git remote add upstream https://github.com/OHIF/Viewers.git`
+5. `yarn install` to restore dependencies and link projects
+
+#### To Develop
+
+_From this repository's root directory:_
+
+```bash
+# Enable Yarn Workspaces
+yarn config set workspaces-experimental true
+
+# Restore dependencies
 yarn install
-
-// Stands up local server to host Viewer.
-// Viewer connects to our public cloud PACS by default
-yarn start
 ```
 
-For more advanced local development scenarios, like using your own locally
-hosted PACS and test data,
-[check out our Essential: Getting Started](https://docs.ohif.org/essentials/getting-started.html)
-guide.
+## Commands
 
-### E2E Tests
+These commands are available from the root directory. Each project directory also supports a number of commands that can be found in their respective `README.md` and `project.json` files.
 
-Using [Cypress](https://www.cypress.io/) to create End-to-End tests and check whether the application flow is performing correctly, ensuring that the integrated components are working as expected.
+| Yarn Commands        | Description                                                   |
+| -------------------- | ------------------------------------------------------------- |
+| **Develop**          |                                                               |
+| `dev` or `start`     | Default development experience for Viewer                     |
+| `dev:project <package-name>` | Replace with `core`, `ui`, `i18n`, `cornerstone`, `vtk`, etc. |
+| `test:unit`          | Jest multi-project test runner; overall coverage              |
+| **Deploy**           |                                                               |
+| `build`*             | Builds production output for our PWA Viewer                   |
+| `build:package`*             | Builds production `commonjs` output for our Viewer                 |
+| `build:package-all`*     | Builds commonjs bundles for all projects                      |
 
-#### Why Cypress?
 
-Cypress is a next generation front end testing tool built for the modern web.
-With Cypress is easy to set up, write, run and debug tests
+\* - For more information on our different builds, check out our [Deploy Docs][deployment-docs]
 
-It allow us to write different types of tests:
+## Projects
 
-- End-to-End tests
-- Integration tests
-- Unit tets
+The OHIF Medical Image Viewing Platform is maintained as a
+[`monorepo`][monorepo]. This means that this repository, instead of containing a
+single project, contains many projects. If you explore our project structure,
+you'll see the following:
 
-All tests must be in `./cypress/integration` folder.
-
-Commands to run the tests:
-
-```js
-// Open Cypress Dashboard that provides insight into what happened when your tests ran
-yarn run cy
-
-// Run all tests using Electron browser headless
-yarn run cy:run
-
-// Run all tests in CI mode
-yarn run cy:run:ci
+```bash
+.
+├── extensions              #
+│   ├── _example            # Skeleton of example extension
+│   ├── cornerstone         # 2D images w/ Cornerstone.js
+│   ├── dicom-html          # Structured Reports as HTML in viewport
+│   ├── dicom-microscopy    # Whole slide microscopy viewing
+│   ├── dicom-pdf           # View DICOM wrapped PDFs in viewport
+│   └── vtk                 # MPR and Volume support w/ VTK.js
+│
+├── platform                #
+│   ├── core                # Business Logic
+│   ├── i18n                # Internationalization Support
+│   ├── ui                  # React component library
+│   └── viewer              # Connects platform and extension projects
+│
+├── ...                     # misc. shared configuration
+├── lerna.json              # MonoRepo (Lerna) settings
+├── package.json            # Shared devDependencies and commands
+└── README.md               # This file
 ```
 
-### Contributing
+Want to better understand why and how we've structured this repository? Read
+more about it in our [Architecture Documentation][ohif-architecture].
 
-> Large portions of the Viewer's functionality are maintained in other
-> repositories. To get a better understanding of the Viewer's architecture and
-> "where things live", read
-> [our docs on the Viewer's architecture](https://docs.ohif.org/advanced/architecture.html#diagram)
+### Platform
 
-It is notoriously difficult to setup multiple dependent repositories for
-end-to-end testing and development. That's why we recommend writing and running
-unit tests when adding and modifying features. This allows us to program in
-isolation without a complex setup, and has the added benefit of producing
-well-tested business logic.
+These projects comprise the
 
-1. Clone this repository
-2. Navigate to the project directory, and `yarn install`
-3. To begin making changes, `yarn run dev`
-4. To commit changes, run `yarn run cm`
+| Name                            | Description | Links |
+| ------------------------------- | ----------- | ----- |
+| [@ohif/core][platform-core]     |             | NPM   |
+| [@ohif/i18n][platform-i18n]     |             | NPM   |
+| [@ohif/viewer][platform-viewer] |             | NPM   |
+| [@ohif/ui][platform-ui]         |             | NPM   |
 
-When creating tests, place the test file "next to" the file you're testing.
-[For example](https://github.com/OHIF/Viewers/blob/master/src/utils/index.test.js):
+### Extensions
 
-```js
-// File
-index.js
+This is a list of Extensions maintained by the OHIF Core team. It's possible to customize and configure these extensions, and you can even create your own. You can [read more about extensions here][ohif-extensions].
 
-// Test for file
-index.test.js
-```
-
-As you add and modify code, `jest` will watch for uncommitted changes and run
-your tests, reporting the results to your terminal. Make a pull request with
-your changes to `master`, and a core team member will review your work. If you
-have any questions, please don't hesitate to reach out via a GitHub issue.
-
-## Issues
-
-_Looking to contribute? Look for the [Good First Issue][good-first-issue]
-label._
-
-### 🐛 Bugs
-
-Please file an issue for bugs, missing documentation, or unexpected behavior.
-
-[**See Bugs**][bugs]
-
-### 💡 Feature Requests
-
-Please file an issue to suggest new features. Vote on feature requests by adding
-a 👍. This helps maintainers prioritize what to work on.
-
-[**See Feature Requests**][requests-feature]
-
-### ❓ Questions
-
-For questions related to using the library, please visit our support community,
-or file an issue on GitHub.
-
-[Google Group][google-group]
-
-## Roadmap
-
-If you want to know what's planned for the very near future,
-[check out our roadmap](https://ohif.canny.io/). The best way to influence when
-and what is worked on is to contribute to the conversation by creating GitHub
-issues, and contributing code through pull requests. OHIF's high level
-priorities for the near future are:
-
-- Feature parity with version 1
-- Extension and configuration improvements with key integration partners
-- Continued Developer Experience Improvements
-- Segmentation Tools, and improved VTK.js support
-
-More granular information will make it's way to the backlog as these items
-become scoped for development by core maintainers.
-
-> Don't hesitate to ask questions, propose features, or create pull requests.
-> We're here, we're listening, and we're ready to build the best open source
-> medical imaging viewer on the web.
-
-#### Roadmap Generously Powered by Canny.io
-
-<a href="https://ohif.canny.io/">
-  <img height="30" src="docs/latest/assets/img/canny-full.png" />
-</a>
-
-## Contributors
-
-Thanks goes to these wonderful people
-([emoji key](https://allcontributors.org/docs/en/emoji-key)):
-
-<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
-<!-- prettier-ignore -->
-<table><tr><td align="center"><a href="https://github.com/swederik"><img src="https://avatars3.githubusercontent.com/u/607793?v=4" width="100px;" alt="Erik Ziegler"/><br /><sub><b>Erik Ziegler</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=swederik" title="Code">💻</a> <a href="#infra-swederik" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/evren217"><img src="https://avatars1.githubusercontent.com/u/4920551?v=4" width="100px;" alt="Evren Ozkan"/><br /><sub><b>Evren Ozkan</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=evren217" title="Code">💻</a></td><td align="center"><a href="https://github.com/galelis"><img src="https://avatars3.githubusercontent.com/u/2378326?v=4" width="100px;" alt="Gustavo André Lelis"/><br /><sub><b>Gustavo André Lelis</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=galelis" title="Code">💻</a></td><td align="center"><a href="http://dannyrb.com/"><img src="https://avatars1.githubusercontent.com/u/5797588?v=4" width="100px;" alt="Danny Brown"/><br /><sub><b>Danny Brown</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dannyrb" title="Code">💻</a> <a href="#infra-dannyrb" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/all-contributors/all-contributors-bot"><img src="https://avatars3.githubusercontent.com/u/46843839?v=4" width="100px;" alt="allcontributors[bot]"/><br /><sub><b>allcontributors[bot]</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=allcontributors" title="Documentation">📖</a></td><td align="center"><a href="https://www.linkedin.com/in/siliconvalleynextgeneration/"><img src="https://avatars0.githubusercontent.com/u/1230575?v=4" width="100px;" alt="Esref Durna"/><br /><sub><b>Esref Durna</b></sub></a><br /><a href="#question-EsrefDurna" title="Answering Questions">💬</a></td><td align="center"><a href="https://github.com/diego0020"><img src="https://avatars3.githubusercontent.com/u/7297450?v=4" width="100px;" alt="diego0020"/><br /><sub><b>diego0020</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=diego0020" title="Code">💻</a></td></tr><tr><td align="center"><a href="https://github.com/dlwire"><img src="https://avatars3.githubusercontent.com/u/1167291?v=4" width="100px;" alt="David Wire"/><br /><sub><b>David Wire</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dlwire" title="Code">💻</a></td><td align="center"><a href="https://github.com/jfmedeiros1820"><img src="https://avatars1.githubusercontent.com/u/2211708?v=4" width="100px;" alt="João Felipe de Medeiros Moreira"/><br /><sub><b>João Felipe de Medeiros Moreira</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=jfmedeiros1820" title="Tests">⚠️</a></td></tr></table>
-
-<!-- ALL-CONTRIBUTORS-LIST:END -->
-
-This project follows the
-[all-contributors](https://github.com/all-contributors/all-contributors)
-specification. Contributions of any kind welcome!
-
-## License
-
-MIT © [OHIF](https://github.com/OHIF)
+| Name                                                           | Description | Links |
+| -------------------------------------------------------------- | ----------- | ----- |
+| [@ohif/extension-cornestone][extension-cornerstone]            |             | NPM   |
+| [@ohif/extension-dicom-html][extension-dicom-html]             |             | NPM   |
+| [@ohif/extension-dicom-microscopy][extension-dicom-microscopy] |             | NPM   |
+| [@ohif/extension-dicom-pdf][extension-dicom-pdf]               |             | NPM   |
+| [@ohif/extension-vtk][extension-vtk]                           |             | NPM   |
 
 ## Acknowledgments
 
@@ -254,12 +211,20 @@ Cancer Institute, Informatics Technology for Cancer Research (ITCR) program,
 under a
 [grant to Dr. Gordon Harris at Massachusetts General Hospital (U24 CA199460)](https://projectreporter.nih.gov/project_info_description.cfm?aid=8971104).
 
+## License
+
+MIT © [OHIF](https://github.com/OHIF)
+
 <!--
-Links:
--->
+  Links
+  -->
 
 <!-- prettier-ignore-start -->
-<!-- ROW -->
+<!-- Badges -->
+[lerna-image]: https://img.shields.io/badge/maintained%20with-lerna-cc00ff.svg
+[lerna-url]: https://lerna.js.org/
+[netlify-image]: https://api.netlify.com/api/v1/badges/a5d369ab-18a6-41c3-bcde-83805205ac7f/deploy-status
+[netlify-url]: https://app.netlify.com/sites/ohif/deploys
 [all-contributors-image]: https://img.shields.io/badge/all_contributors-0-orange.svg?style=flat-square
 [contributing-url]: https://github.com/OHIF/Viewers/blob/react/CONTRIBUTING.md
 [circleci-image]: https://circleci.com/gh/OHIF/Viewers.svg?style=svg
@@ -278,18 +243,27 @@ Links:
 [docker-image-url]: https://hub.docker.com/r/ohif/viewer
 [license-image]: https://img.shields.io/badge/license-MIT-blue.svg?style=flat-square
 [license-url]: LICENSE
-<!-- DOCS -->
+<!-- Links -->
+[monorepo]: https://en.wikipedia.org/wiki/Monorepo
+[how-to-fork]: https://help.github.com/en/articles/fork-a-repo
+[how-to-clone]: https://help.github.com/en/articles/fork-a-repo#step-2-create-a-local-clone-of-your-fork
+[ohif-architecture]: https://docs.ohif.org/advanced/architecture.html
+[ohif-extensions]: https://docs.ohif.org/advanced/architecture.html
+[deployment-docs]: https://docs.ohif.org/deployment/
 [react-url]: https://reactjs.org/
 [pwa-url]: https://developers.google.com/web/progressive-web-apps/
 [ohif-viewer-url]: https://www.npmjs.com/package/ohif-viewer
 [configuration-url]: https://docs.ohif.org/essentials/configuration.html
 [extensions-url]: https://docs.ohif.org/advanced/extensions.html
-<!-- Misc. -->
-[react-viewer]: https://github.com/OHIF/Viewers/tree/react
-<!-- Issue Boilerplate -->
-[bugs]: https://github.com/OHIF/Viewers/labels/bug
-[requests-feature]: https://github.com/OHIF/Viewers/labels/enhancement
-[good-first-issue]: https://github.com/OHIF/Viewers/labels/good%20first%20issue
-[google-group]: https://groups.google.com/forum/#!forum/cornerstone-platform
-
+<!-- Platform -->
+[platform-core]: platform/core/README.md
+[platform-i18n]: platform/i18n/README.md
+[platform-ui]: platform/ui/README.md
+[platform-viewer]: platform/viewer/README.md
+<!-- Extensions -->
+[extension-cornerstone]: extensions/cornerstone/README.md
+[extension-dicom-html]: extensions/dicom-html/README.md
+[extension-dicom-microscopy]: extensions/dicom-microscopy/README.md
+[extension-dicom-pdf]: extensions/dicom-pdf/README.md
+[extension-vtk]: extensions/vtk/README.md
 <!-- prettier-ignore-end -->

aliases.config.js

@@ -0,0 +1,8 @@
+/* Used by webpack, babel and eslint */
+
+const path = require('path');
+
+module.exports = {
+  '@codinsky/parse-js': path.resolve(__dirname, 'packages/parse/src'),
+  '@codinsky/curate': path.resolve(__dirname, 'packages/curate/src'),
+};

babel.config.js

@@ -0,0 +1,57 @@
+const aliases = require('./aliases.config');
+const path = require('path');
+
+module.exports = {
+  // Also specified in .webpack/webpack.common.js
+  // https://github.com/zloirock/core-js/blob/master/docs/2019-03-19-core-js-3-babel-and-a-look-into-the-future.md
+  presets: [
+    [
+      '@babel/preset-env',
+      {
+        targets: {
+          ie: '11',
+        },
+        // https://babeljs.io/docs/en/babel-preset-env#usebuiltins
+        useBuiltIns: 'usage',
+        // https://babeljs.io/docs/en/babel-preset-env#corejs
+        corejs: 3,
+      },
+    ],
+    '@babel/preset-react',
+  ],
+  // https://babeljs.io/docs/en/options#babelrcroots
+  babelrcRoots: ['./platform/*', './extensions/*'],
+  plugins: [
+    'react-hot-loader/babel',
+    'inline-react-svg',
+    '@babel/plugin-proposal-class-properties',
+    '@babel/plugin-proposal-object-rest-spread',
+    '@babel/plugin-syntax-dynamic-import',
+    '@babel/plugin-transform-regenerator',
+    '@babel/plugin-transform-runtime',
+    [
+      'module-resolver',
+      {
+        // https://github.com/tleunen/babel-plugin-module-resolver/issues/338
+        // There seem to be a bug with module-resolver with a mono-repo setup:
+        // It doesn't resolve paths correctly when using root/alias combo, so we
+        // use this function instead.
+        resolvePath(sourcePath, currentFile, opts) {
+          // This will return undefined if aliases has no key for the sourcePath,
+          // in which case module-resolver will fallback on its default behaviour.
+          return aliases[sourcePath];
+        },
+      },
+    ],
+  ],
+  env: {
+    debug: {
+      sourceMaps: 'inline',
+      retainLines: true,
+    },
+    build: {
+      ignore: ['**/*.test.jsx', '**/*.test.js', '__snapshots__', '__tests__'],
+    },
+  },
+  // ignore: ["node_modules"]
+};

dockerfile

@@ -1,48 +0,0 @@
-# This dockerfile is used to publish the `ohif/viewer` image on dockerhub.
-#
-# It's a good example of how to build our static application and package it
-# with a web server capable of hosting it as static content.
-#
-# docker build
-# --------------
-# If you would like to use this dockerfile to build and tag an image, make sure
-# you set the context to the project's root directory:
-# https://docs.docker.com/engine/reference/commandline/build/
-#
-#
-# SUMMARY
-# --------------
-# This dockerfile has two stages:
-#
-# 1. Building the React application for production
-# 2. Setting up our Nginx (Alpine Linux) image w/ step one's output
-#
-
-
-# Stage 1: Build the application
-# docker build -t ohif/viewer:latest .
-FROM node:11.2.0-slim as builder
-
-# RUN apt-get update && apt-get install -y git yarn
-RUN mkdir /usr/src/app
-WORKDIR /usr/src/app
-
-ENV PATH /usr/src/app/node_modules/.bin:$PATH
-ENV GENERATE_SOURCEMAP=false
-
-COPY package.json /usr/src/app/package.json
-COPY yarn.lock /usr/src/app/yarn.lock
-
-ADD . /usr/src/app/
-RUN yarn install
-RUN yarn run build:web
-
-# Stage 2: Bundle the built application into a Docker container
-# which runs Nginx using Alpine Linux
-FROM nginx:1.15.5-alpine
-RUN rm -rf /etc/nginx/conf.d
-COPY docker/Viewer-v2.x /etc/nginx/conf.d
-COPY --from=builder /usr/src/app/build /usr/share/nginx/html
-EXPOSE 80
-EXPOSE 443
-CMD ["nginx", "-g", "daemon off;"]

docs/latest/advanced/_maintained-extensions-table.md

@@ -10,7 +10,7 @@
         <!-- CORNERSTONE.js -->
         <tr>
             <td>
-                <a href="https://www.npmjs.com/package/ohif-cornerstone-extension">
+                <a href="https://www.npmjs.com/package/@ohif/extension-cornerstone">
                     Cornerstone
                 </a>
             </td>
@@ -22,7 +22,7 @@
         <!-- VTK.js -->
         <tr>
             <td>
-                <a href="https://www.npmjs.com/package/ohif-vtk-extension">
+                <a href="https://www.npmjs.com/package/@ohif/extension-vtk">
                     VTK.js
                 </a>
             </td>
@@ -33,30 +33,30 @@
         </tr>
         <tr>
             <td>
-                <a href="">HTML</a>
+                <a href="https://www.npmjs.com/package/@ohif/extension-dicom-html">DICOM HTML</a>
             </td>
             <td>
-                Renders text and HTML content for <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-html-extension/src/OHIFDicomHtmlSopClassHandler.js#L7-L15">specific SopClassUIDs</a>.
+                Renders text and HTML content for <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-html/src/OHIFDicomHtmlSopClassHandler.js#L4-L12">specific SopClassUIDs</a>.
             </td>
             <td>Viewport, SopClassHandler</td>
         </tr>
         <tr>
             <td>
-                <a href="https://www.npmjs.com/package/ohif-dicom-pdf-extension">PDF</a>
+                <a href="https://www.npmjs.com/package/@ohif/extension-dicom-pdf">DICOM PDF</a>
             </td>
             <td>
-                Renders PDFs for a <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-pdf-extension/src/OHIFDicomPDFSopClassHandler.js#L8">specific SopClassUID</a>.
+                Renders PDFs for a <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-pdf/src/OHIFDicomPDFSopClassHandler.js#L4-L6">specific SopClassUID</a>.
             </td>
             <td>Viewport, SopClassHandler</td>
         </tr>
         <tr>
             <td>
-                <a href="https://www.npmjs.com/package/ohif-dicom-microscopy-extension">Microscopy</a>
+                <a href="https://www.npmjs.com/package/@ohif/extension-dicom-microscopy">DICOM Microscopy</a>
             </td>
             <td>
-                Renders Microscopy images for a <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-microscopy-extension/src/DicomMicroscopySopClassHandler.js#L6">specific SopClassUID</a>.
+                Renders Microscopy images for a <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-microscopy/src/DicomMicroscopySopClassHandler.js#L5-L7">specific SopClassUID</a>.
             </td>
             <td>Viewport, SopClassHandler</td>
         </tr>
     </tbody>
-</table>
+</table>

docs/latest/advanced/architecture.md

@@ -12,17 +12,13 @@ architected, and the role each of it's dependent libraries plays.
 
 ## Overview
 
-The [`OHIF/Viewers`](https://github.com/OHIF/Viewers/tree/react) repository
-contains the source code for the OHIF Medical Imaging Viewer. It is effectively
-a React
-[progressive web app](https://developers.google.com/web/progressive-web-apps/)
-(PWA) that combines the business logic housed in
-[`OHIF/ohif-core`](https://github.com/OHIF/ohif-core) and the components in our
-React Component library
-[`OHIF/react-viewerbase`](https://github.com/OHIF/react-viewerbase). It provides
-customization for common use cases through
-[configuration](../essentials/configuration.md) and for adding functionality via
-[extensions](./extensions.md).
+The [`OHIF/Viewers`][viewers-project] project contains the source code for the
+OHIF Medical Imaging Viewer. It is effectively a React [progressive web
+app][pwa] (PWA) that combines the business logic housed in
+[`OHIF/ohif-core`][core] and the components in our React Component library
+[`OHIF/react-viewerbase`][component-library]. It provides customization for
+common use cases through [configuration][configuration] and for adding
+functionality via [extensions][extensions].
 
 ### Business Logic
 
@@ -71,13 +67,13 @@ looking for ways to improve our extensibility ^\_^
 
 This diagram is a conceptual illustration of how the Viewer is architected.
 
-0. (optional) `extensions` can be registered with `ohif-core`'s extension
+1. (optional) `extensions` can be registered with `ohif-core`'s extension
    manager
-1. `ohif-core` provides bussiness logic and a way for `viewer` to access
+2. `ohif-core` provides bussiness logic and a way for `viewer` to access
    registered extensions
-1. The `viewer` composes and provides data to components from our component
+3. The `viewer` composes and provides data to components from our component
    library (`react-viewerbase`)
-1. The `viewer` can be built and served as a stand-alone PWA, or as an
+4. The `viewer` can be built and served as a stand-alone PWA, or as an
    embeddable package
    ([`ohif-viewer`](https://www.npmjs.com/package/ohif-viewer))
 
@@ -98,3 +94,16 @@ You can, but you will not be able to leverage as much of the existing code and
 components. `ohif-core` could still be used for business logic, and to provide a
 model for extensions. `react-viewerbase` would then become a guide for the
 components you would need to recreate.
+
+<!--
+  Links
+  -->
+
+<!-- prettier-ignore-start -->
+[viewers-project]: https://github.com/OHIF/Viewers
+[pwa]: https://developers.google.com/web/progressive-web-apps/
+[core]: https://github.com/OHIF/ohif-core
+[component-library]: https://github.com/OHIF/react-viewerbase
+[configuration]: ../essentials/configuration.md
+[extensions]: ./extensions.m
+<!-- prettier-ignore-end -->

docs/latest/advanced/extensions.md

@@ -152,7 +152,7 @@ is used depends on:
 <center><i>An example of three Viewports</i></center>
 
 For a complete example implementation,
-[check out the OHIFCornerstoneViewport](https://github.com/OHIF/Viewers/blob/react/extensions/ohif-cornerstone-extension/src/OHIFCornerstoneViewport.js).
+[check out the OHIFCornerstoneViewport](https://github.com/OHIF/Viewers/blob/master/extensions/cornerstone/src/OHIFCornerstoneViewport.js).
 
 #### Toolbar
 
@@ -168,7 +168,7 @@ store.
 Toolbar components are rendered in the `ToolbarRow` component.
 
 For a complete example implementation,
-[check out the OHIFCornerstoneViewport's Toolbar Module](https://github.com/OHIF/Viewers/blob/react/extensions/ohif-cornerstone-extension/src/ToolbarModule.js).
+[check out the OHIFCornerstoneViewport's Toolbar Module](https://github.com/OHIF/Viewers/blob/master/extensions/cornerstone/src/toolbarModule.js).
 
 #### SopClassHandler
 
@@ -198,7 +198,7 @@ _app.js_
 
 ```js
 import { createStore, combineReducers } from 'redux';
-import OHIF from 'ohif-core';
+import OHIF from '@ohif/core';
 import OHIFCornerstoneExtension from 'ohif-cornerstone-extension';
 
 const combined = combineReducers(OHIF.redux.reducers);
@@ -214,8 +214,8 @@ ExtensionManager.registerExtensions(store, extensions);
 
 A small number of powerful extensions for popular use cases are maintained by
 OHIF. They're co-located in the
-[`OHIF/Viewers`](https://github.com/OHIF/Viewers/tree/react/) repository, in the
-top level [`extensions/`](https://github.com/OHIF/Viewers/tree/react/extensions)
+[`OHIF/Viewers`](https://github.com/OHIF/Viewers) repository, in the top level
+[`extensions/`](https://github.com/OHIF/Viewers/tree/master/extensions)
 directory.
 
 {% include "./_maintained-extensions-table.md" %}
@@ -225,6 +225,6 @@ directory.
 -->
 
 <!-- prettier-ignore-start -->
-[example-ext-src]: https://github.com/OHIF/Viewers/blob/master/extensions/_ohif-example-extension/src/index.js)
-[module-types]: https://github.com/OHIF/ohif-core/blob/43c08a29eff3fb646a0e83a03a236ddd84f4a6e8/src/plugins.js#L1-L6
+[example-ext-src]: https://github.com/OHIF/Viewers/tree/master/extensions/_example/src
+[module-types]: https://github.com/OHIF/Viewers/blob/master/platform/core/src/extensions/MODULE_TYPES.js
 <!-- prettier-ignore-end -->

docs/latest/advanced/monorepos-a-crash-courese.md

@@ -0,0 +1,23 @@
+# MonoRepos: A Crash Course
+
+- [Lerna][lerna]
+
+Solutions:
+
+## Semantic-Release
+
+- [Semantic-Release](https://github.com/semantic-release/semantic-release/issues/193#issuecomment-462063871)
+- [Multi-semantic-release](https://github.com/dhoulb/multi-semantic-release)
+- [semantic-release-monorepo](https://github.com/Updater/semantic-release-monorepo)
+
+# Netlify
+
+- https://community.netlify.com/t/best-practices-for-deploying-sites-from-monorepos/818
+
+<!--
+  Links
+  -->
+
+<!-- prettier-ignore-start -->
+[lerna]: https://github.com/lerna/lerna
+<!-- prettier-ignore-end -->

docs/latest/connecting-to-image-archives/google-cloud-healthcare.md

@@ -1,11 +1,5 @@
 # Google Cloud Healthcare
 
-> ATTENTION: The original documentation for this integration lives in the legacy
-> `version 1` Meteor documentation. You can
-> [find it here](/history/v1/connecting-to-image-archives/google-cloud-healthcare.html).
-> These docs will mirror the Meteor documentation until our `React`
-> implementation has been updated to work with Google Cloud Healthcare.
-
 > The [Google Cloud Healthcare API](https://cloud.google.com/healthcare/) is a
 > powerful option for storing medical imaging data in the cloud.
 
@@ -16,10 +10,7 @@ store their data in the cloud. It offers an
 [almost-entirely complete DICOMWeb API](https://cloud.google.com/healthcare/docs/dicom)
 which requires tokens generated via the
 [OAuth 2.0 Sign In flow](https://developers.google.com/identity/sign-in/web/sign-in).
-Images can even be transcoded on the fly if this is desired. The Cloud
-Healthcare API is a very attractive option because it allows us to avoid
-deploying the Meteor server entirely. We can just deploy OHIF as a client-only
-static site application.
+Images can even be transcoded on the fly if this is desired.
 
 ## Setup a Google Cloud Healthcare Project
 
@@ -44,10 +35,10 @@ static site application.
   - Choose the "Web Application" type
   - Set up an
     [OAuth 2.0 Client ID](https://support.google.com/cloud/answer/6158849?hl=en)
-  - Add your domain (e.g. `http://localhost:3000`) to Authorized JavaScript
+  - Add your domain (e.g. `http://localhost:5000`) to Authorized JavaScript
     origins.
-  - Add your domain, plus `_oauth/google` (e.g.
-    `http://localhost:3000/_oauth/google`) to Authorized Redirect URIs.
+  - Add your domain, plus `callback` (e.g.
+    `http://localhost:5000/callback`) to Authorized Redirect URIs.
   - Save your Client ID for later.
 
 - (Optional): Enable Public Datasets that are being hosted by Google:
@@ -55,70 +46,26 @@ static site application.
 
 ## Run the viewer with your OAuth Client ID
 
-1. Open the `config/oidc-googleCloud.json` file and change `YOURCLIENTID` to
+1. Open the `config/google.js` file and change `YOURCLIENTID` to
    your Client ID value.
-1. Run the OHIF Viewer using the oidc-googleCloud.json configuration file
+1. Run the OHIF Viewer using the config/google.js configuration file
 
 ```bash
 cd OHIFViewer
-METEOR_PACKAGE_DIRS="../Packages" meteor npm install
-METEOR_PACKAGE_DIRS="../Packages" meteor --settings ../config/oidc-googleCloud.json
+yarn install
+APP_CONFIG=config/google.js yarn run dev
 ```
 
 ## Running via Docker
 
-OHIF is also providing a Docker container which can connect to Google Cloud
-Healthcare with a Client ID which is provided at runtime. This is a very simple
-method to get up and running. Internally, the container is running
-[Nginx](https://nginx.org/) to serve the
-[Standalone Viewer](../standalone-viewer/usage.md).
+The OHIF Viewer Docker container can be connected to Google Cloud
+Healthcare by providing a Client ID at runtime. This is a very simple
+method to get up and running.
 
 1. Install Docker (https://www.docker.com/)
 1. Run the Docker container, providing a Client ID as an environment variable.
    Client IDs look like `xyz.apps.googleusercontent.com`.
 
 ```bash
-docker run --env CLIENT_ID=$CLIENT_ID --publish 3000:80 ohif/viewer-google-cloud:latest
-```
-
-## Building the ohif/viewer-google-cloud Docker Image
-
-The
-[ohif/viewer-google-cloud](https://cloud.docker.com/u/ohif/repository/docker/ohif/viewer-google-cloud)
-Docker image is built as follows. The Dockerfile and nginx.conf are in the
-`/dockersupport/viewer-google-cloud` folder.
-
-1. [Install Meteor](https://www.meteor.com/install)
-1. Clone the repository
-
-```bash
-git clone https://github.com/OHIF/Viewers.git
-cd Viewers
-```
-
-1. Install meteor-build-client-fixed2 so you can build the Standalone Viewer
-
-```bash
-npm install -g meteor-build-client-fixed2
-```
-
-1. Build the Standalone client-only OHIF Viewer
-
-```bash
-cd OHIFViewer/
-METEOR_PACKAGE_DIRS="../Packages" meteor npm install
-METEOR_PACKAGE_DIRS="../Packages" meteor-build-client-fixed2 ../dockersupport/viewer-google-cloud/build -s ../config/oidc.json
-```
-
-1. Build the Docker image
-
-```bash
-cd ../dockersupport/viewer-google-cloud
-docker build -t ohif/viewer-google-cloud .
-```
-
-1. Run the Docker image using an OAuth Client ID
-
-```bash
-docker run --env CLIENT_ID={$someID}.apps.googleusercontent.com --publish 3000:80 ohif/viewer-google-cloud
+docker run --env CLIENT_ID=$CLIENT_ID --publish 5000:80 ohif/viewer:latest
 ```

docs/latest/deployment/recipes/build-for-production.md

@@ -71,11 +71,11 @@ how to configure the project for your own imaging archive below.
 #### How it Works
 
 The configuration for our project is in the `/public/config` directory. Our
-build process knows which configuration file to use based on the
-`REACT_APP_CONFIG` environment variable. By default, its value is
-[`default.js`](https://github.com/OHIF/Viewers/blob/react/public/config/default.js).
-When we build, the `%REACT_APP_CONFIG%` value in
-our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/react/public/index.html#L12-L15)
+build process knows which configuration file to use based on the `APP_CONFIG`
+environment variable. By default, its value is
+[`default.js`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/config/default.js).
+When we build, the `%APP_CONFIG%` value in
+our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/index.html)
 file is substituted for the correct configuration file's name. This sets
 the`window.config` equal to our configuration file's value.
 
@@ -88,7 +88,6 @@ _/public/config/default.js_
 ```js
 window.config = {
   routerBasename: '/',
-  relativeWebWorkerScriptsPath: '',
   servers: {
     dicomWeb: [
       {
@@ -105,17 +104,17 @@ window.config = {
       },
     ],
   },
-}
+};
 ```
 
 You can also create a new config file and specify its path relative to the build
-output's root by setting the `REACT_APP_CONFIG` environment variable. You can
-set the value of this environment variable a few different ways:
+output's root by setting the `APP_CONFIG` environment variable. You can set the
+value of this environment variable a few different ways:
 
 - [Add a temporary environment variable in your shell](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-temporary-environment-variables-in-your-shell)
 - [Add environment specific variables in `.env` file(s)](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-development-environment-variables-in-env)
 - Using the `cross-env` package in an npm script:
-  - `"build": "cross-env REACT_APP_CONFIG=config/my-config.js react-scripts build"`
+  - `"build": "cross-env APP_CONFIG=config/my-config.js react-scripts build"`
 
 After updating the configuration, `yarn run build:web` to generate updated build
 output.

docs/latest/deployment/recipes/embedded-viewer.md

@@ -50,8 +50,6 @@ include tags. Here's how it works:
 window.config = {
   // default: '/'
   routerBasename: '/',
-  // default: ''
-  relativeWebWorkerScriptsPath: '',
   servers: {
     dicomWeb: [
       {

docs/latest/deployment/recipes/nginx--image-archive.md

@@ -11,7 +11,7 @@ control.
 Do not use this recipe to host sensitive medical data on the open web. Depending
 on your company's policies, this may be an appropriate setup on an internal
 network when protected with a server's basic authentication. For a more robust
-setup, check out our [user account control recpie](./user-account-control.md)
+setup, check out our [user account control recipe](./user-account-control.md)
 that builds on the lessons learned here.
 
 ## Overview
@@ -51,7 +51,7 @@ We can solve this one of two ways:
 
 This solution uses the first approach, but you can see an example of the second
 in the `docker-compose` bundled with this project for local development:
-[HERE](#)
+[HERE](https://github.com/OHIF/Viewers/blob/master/platform/viewer/.recipes/Nginx-Orthanc/docker-compose.yml)
 
 You can read more about CORS in this Medium article: [Understanding
 CORS][understanding-cors]
@@ -124,10 +124,10 @@ likely want to update:
 The OHIF Viewer's configuration is imported from a static `.js` file and made
 available globally at `window.config`. The configuration we use is set to a
 specific file when we build the viewer, and determined by the env variable:
-`REACT_APP_CONFIG`. You can see where we set its value in the `dockerfile` for
-this solution:
+`APP_CONFIG`. You can see where we set its value in the `dockerfile` for this
+solution:
 
-`ENV REACT_APP_CONFIG=config/docker_openresty-orthanc.js`
+`ENV APP_CONFIG=config/docker_openresty-orthanc.js`
 
 You can find the configuration we're using here:
 `/public/config/docker_openresty-orthanc.js`

docs/latest/deployment/recipes/user-account-control.md

@@ -125,10 +125,10 @@ likely want to update:
 The OHIF Viewer's configuration is imported from a static `.js` file and made
 available globally at `window.config`. The configuration we use is set to a
 specific file when we build the viewer, and determined by the env variable:
-`REACT_APP_CONFIG`. You can see where we set its value in the `dockerfile` for
-this solution:
+`APP_CONFIG`. You can see where we set its value in the `dockerfile` for this
+solution:
 
-`ENV REACT_APP_CONFIG=config/docker_openresty-orthanc-keycloak.js`
+`ENV APP_CONFIG=config/docker_openresty-orthanc-keycloak.js`
 
 You can find the configuration we're using here:
 `/public/config/docker_openresty-orthanc-keycloak.js`
@@ -281,9 +281,9 @@ community members put together:
 [orthanc-docs]: http://book.orthanc-server.com/users/configuration.html#configuration
 [lua-resty-openidc-docs]: https://github.com/zmartzone/lua-resty-openidc
 <!-- SRC -->
-[config]: #
-[dockerfile]: #
-[config-nginx]: #
-[config-orthanc]: #
-[config-keycloak]: #
+[config]: https://github.com/OHIF/Viewers/blob/master/platform/viewer/src/config.js
+[dockerfile]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
+[config-nginx]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
+[config-orthanc]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
+[config-keycloak]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
 <!-- prettier-ignore-end -->

docs/latest/essentials/configuration.md

@@ -7,11 +7,11 @@
 ## How it Works
 
 The configuration for our project is in the `/public/config` directory. Our
-build process knows which configuration file to use based on the
-`REACT_APP_CONFIG` environment variable. By default, its value is
-[`default.js`](https://github.com/OHIF/Viewers/blob/react/public/config/default.js).
-When we build, the `%REACT_APP_CONFIG%` value in
-our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/react/public/index.html#L12-L15)
+build process knows which configuration file to use based on the `APP_CONFIG`
+environment variable. By default, its value is
+[`default.js`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/config/default.js).
+When we build, the `%APP_CONFIG%` value in
+our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/index.html)
 file is substituted for the correct configuration file's name. This sets the
 `window.config` equal to our configuration file's value.
 
@@ -24,7 +24,6 @@ _/public/config/default.js_
 ```js
 window.config = {
   routerBasename: '/',
-  relativeWebWorkerScriptsPath: '',
   servers: {
     dicomWeb: [
       {
@@ -41,17 +40,17 @@ window.config = {
       },
     ],
   },
-}
+};
 ```
 
 You can also create a new config file and specify its path relative to the build
-output's root by setting the `REACT_APP_CONFIG` environment variable. You can
-set the value of this environment variable a few different ways:
+output's root by setting the `APP_CONFIG` environment variable. You can set the
+value of this environment variable a few different ways:
 
 - [Add a temporary environment variable in your shell](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-temporary-environment-variables-in-your-shell)
 - [Add environment specific variables in `.env` file(s)](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-development-environment-variables-in-env)
 - Using the `cross-env` package in an npm script:
-  - `"build": "cross-env REACT_APP_CONFIG=config/my-config.js react-scripts build"`
+  - `"build": "cross-env APP_CONFIG=config/my-config.js react-scripts build"`
 
 After updating the configuration, `yarn run build:web` to generate updated build
 output.

docs/latest/essentials/data-source.md

@@ -60,8 +60,8 @@ _Upload your first Study:_
 #### Orthanc: Learn More
 
 You can see the `docker-compose.yml` file this command runs at
-[`<project-root>/docker/Nginx-Docker/`](#), and more on Orthanc for Docker in
-[Orthanc's documentation][orthanc-docker].
+[`<project-root>/platform/viewer/.recipes/Nginx-Orthanc/`](https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes/Nginx-Orthanc),
+and more on Orthanc for Docker in [Orthanc's documentation][orthanc-docker].
 
 ### Connecting to Orthanc
 
@@ -87,24 +87,22 @@ is running the `dev:orthanc` script in our project's `package.json`. That script
 is:
 
 ```js
-cross-env PORT=5000 REACT_APP_CONFIG=config/docker_nginx-orthanc.js react-scripts start
+cross-env PORT=5000 APP_CONFIG=config/docker_nginx-orthanc.js react-scripts start
 ```
 
 - `cross-env` sets two environment variables
   - PORT: 5000
-  - REACT_APP_CONFIG: `config/docker_nginx-orthanc.js`
+  - APP_CONFIG: `config/docker_nginx-orthanc.js`
 - `react-scripts` runs it's `start` script. This is [the de-facto
   way][cra-start] to run a "Create React App" in development mode.
 
-The `REACT_APP_CONFIG` value tells our app which file to load on to
-`window.config`. By default, our app uses the file at
-`<project-root>/public/config/default.js`. Here is what that configuration looks
-like:
+The `APP_CONFIG` value tells our app which file to load on to `window.config`.
+By default, our app uses the file at `<project-root>/public/config/default.js`.
+Here is what that configuration looks like:
 
 ```js
 window.config = {
   routerBasename: '/',
-  relativeWebWorkerScriptsPath: '',
   servers: {
     dicomWeb: [
       {

docs/latest/frequently-asked-questions.md

@@ -37,8 +37,8 @@ Some tips for filing a new issue:
 At the moment we are in the process of defining our roadmap and will do our best
 to communicate this to the community. If your requested feature is on the
 roadmap, then it will most likely be built at some point. If it is not, you are
-welcome to build it yourself and [contribute it](../contributing.md). If you
-have resources and would like to fund the development of a feature, please
+welcome to build it yourself and [contribute it](contributing.md). If you have
+resources and would like to fund the development of a feature, please
 [contact us](http://www.ohif.org).
 
 ### Who should I contact about Academic Collaborations?

docs/latest/yarn.lock

@@ -1074,10 +1074,10 @@ gitbook-plugin-sitemap@^1.2.0:
   dependencies:
     sitemap "1.5.0"
 
-gitbook-plugin-theme-cornerstone@^1.1.2:
-  version "1.1.3"
-  resolved "https://registry.yarnpkg.com/gitbook-plugin-theme-cornerstone/-/gitbook-plugin-theme-cornerstone-1.1.3.tgz#320e1d688eaf27dbf8d580f285509b55984437fd"
-  integrity sha512-fURj67XGQ5rZPj8LXbwEviMxLfWgN/s08t9Wnp1dQqffBUJwsLe00R/IeecOjsQHJ3Gvb8GjbXJ6qzIDGu5hPA==
+gitbook-plugin-theme-cornerstone@^1.1.4:
+  version "1.1.4"
+  resolved "https://registry.yarnpkg.com/gitbook-plugin-theme-cornerstone/-/gitbook-plugin-theme-cornerstone-1.1.4.tgz#bc21b65acee2ac67e2ddb0986442ec448fe0c7fb"
+  integrity sha512-BADgFyEKhkc0pPSBRwXa5VU2UoYQkd2cRwjrtjHyV6w4h/M7uyeWYFOcsgi2ju3rpHRCwF8lMg/TtDdAV8V1SQ==
 
 gitbook-plugin-versions@^2.1.4:
   version "2.1.4"
@@ -1608,9 +1608,9 @@ lodash.map@^4.4.0:
   integrity sha1-dx7Hg540c9nEzeKLGTlMNWL09tM=
 
 lodash.merge@^4.4.0:
-  version "4.6.1"
-  resolved "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.1.tgz#adc25d9cb99b9391c59624f379fbba60d7111d54"
-  integrity sha512-AOYza4+Hf5z1/0Hztxpm2/xiPZgi/cjMqdnKTUWTBSKchJlxXXuUSxCCl8rJlf4g6yww/j6mA8nC8Hw/EZWxKQ==
+  version "4.6.2"
+  resolved "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.2.tgz#558aa53b43b661e1925a0afdfa36a9a1085fe57a"
+  integrity sha512-0KpjqXRVvrYyCsX1swR/XTK0va6VQkQM6MNo7PqW77ByjAhoARA8EfrP1N4+KlKj8YS0ZUCtRT/YUuhyYDujIQ==
 
 lodash.pad@^4.1.0:
   version "4.5.1"

eslintAliasesResolver.js

@@ -0,0 +1,8 @@
+module.exports.interfaceVersion = 2;
+
+module.exports.resolve = (source, file, aliases) => {
+  if (aliases[source]) {
+    return { found: true, path: aliases[source] };
+  }
+  return { found: false };
+};

extensions/cornerstone/.webpack/webpack.dev.js

@@ -0,0 +1,16 @@
+const path = require('path');
+const merge = require('webpack-merge');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+
+//
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-development
+    mode: 'development',
+  });
+};

extensions/cornerstone/.webpack/webpack.prod.js

@@ -0,0 +1,39 @@
+const merge = require('webpack-merge');
+const path = require('path');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+const pkg = require('./../package.json');
+
+const ROOT_DIR = path.join(__dirname, './..');
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-production
+    mode: 'production',
+    devtool: 'source-map',
+    stats: {
+      colors: true,
+      hash: true,
+      timings: true,
+      assets: true,
+      chunks: false,
+      chunkModules: false,
+      modules: false,
+      children: false,
+      warnings: true,
+    },
+    optimization: {
+      minimize: true,
+      sideEffects: true,
+    },
+    output: {
+      path: ROOT_DIR,
+      library: 'ohifExtensionCornerstone',
+      libraryTarget: 'umd',
+      filename: pkg.main,
+    },
+  });
+};

extensions/cornerstone/CHANGELOG.md

@@ -0,0 +1,98 @@
+# Change Log
+
+All notable changes to this project will be documented in this file.
+See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.50.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.50.0-alpha.10...@ohif/extension-cornerstone@0.50.1) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
+# [0.50.0-alpha.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.9...@ohif/extension-cornerstone@0.50.0-alpha.10) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
+## [0.0.39-alpha.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.8...@ohif/extension-cornerstone@0.0.39-alpha.9) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
+## 0.0.39-alpha.8 (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.6...@ohif/extension-cornerstone@0.0.39-alpha.7) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.5...@ohif/extension-cornerstone@0.0.39-alpha.6) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.4...@ohif/extension-cornerstone@0.0.39-alpha.5) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.3...@ohif/extension-cornerstone@0.0.39-alpha.4) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.2...@ohif/extension-cornerstone@0.0.39-alpha.3) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.39-alpha.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.1...@ohif/extension-cornerstone@0.0.39-alpha.2) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+## [0.0.39-alpha.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@0.0.39-alpha.0...@ohif/extension-cornerstone@0.0.39-alpha.1) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+## 0.0.39-alpha.0 (2019-08-05)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone

extensions/cornerstone/package.json

@@ -0,0 +1,53 @@
+{
+  "name": "@ohif/extension-cornerstone",
+  "version": "0.50.1",
+  "description": "OHIF extension for Cornerstone",
+  "author": "OHIF",
+  "license": "MIT",
+  "repository": "OHIF/Viewers",
+  "main": "dist/index.umd.js",
+  "module": "src/index.js",
+  "engines": {
+    "node": ">=10",
+    "npm": ">=6",
+    "yarn": ">=1.16.0"
+  },
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "publishConfig": {
+    "access": "public"
+  },
+  "scripts": {
+    "dev": "webpack --config .webpack/webpack.dev.js --watch --debug --output-pathinfo",
+    "dev:cornerstone": "yarn run dev",
+    "build": "webpack --config .webpack/webpack.prod.js",
+    "build:package": "yarn run build",
+    "prepublishOnly": "yarn run build",
+    "start": "yarn run dev"
+  },
+  "peerDependencies": {
+    "@ohif/core": "^0.50.0",
+    "@ohif/ui": "^0.50.0",
+    "cornerstone-core": "^2.2.8",
+    "cornerstone-math": "^0.1.8",
+    "cornerstone-tools": "^3.1.0",
+    "cornerstone-wado-image-loader": "^3.0.0",
+    "dcmjs": "^0.3.8",
+    "dicom-parser": "^1.8.3",
+    "hammerjs": "^2.0.8",
+    "prop-types": "^15.6.2",
+    "react": "^15.0.0 || ^16.0.0",
+    "react-dom": "^15.0.0 || ^16.0.0",
+    "react-redux": "^6.0.0",
+    "react-resize-detector": "^3.4.0",
+    "redux": "^4.0.1"
+  },
+  "dependencies": {
+    "@babel/runtime": "^7.5.5",
+    "classnames": "^2.2.6",
+    "lodash.throttle": "^4.1.1",
+    "react-cornerstone-viewport": "0.1.30"
+  }
+}

extensions/cornerstone/src/ConnectedCornerstoneViewport.js

@@ -1,9 +1,24 @@
 import CornerstoneViewport from 'react-cornerstone-viewport';
-import OHIF from 'ohif-core';
+import OHIF from '@ohif/core';
 import { connect } from 'react-redux';
 import throttle from 'lodash.throttle';
 
 const { setViewportActive, setViewportSpecificData } = OHIF.redux.actions;
+const {
+  onAdded,
+  onRemoved,
+  onModified,
+} = OHIF.measurements.MeasurementHandlers;
+
+// TODO: Transition to enums for the action names so that we can ensure they stay up to date
+// everywhere they're used.
+const MEASUREMENT_ACTION_MAP = {
+  added: onAdded,
+  removed: onRemoved,
+  modified: throttle(event => {
+    return onModified(event);
+  }, 300),
+};
 
 const mapStateToProps = (state, ownProps) => {
   let dataFromStore;
@@ -71,20 +86,7 @@ const mapDispatchToProps = (dispatch, ownProps) => {
     },
 
     onMeasurementsChanged: (event, action) => {
-      const {
-        onAdded,
-        onRemoved,
-        onModified,
-      } = OHIF.measurements.MeasurementHandlers;
-      const actions = {
-        added: onAdded,
-        removed: onRemoved,
-        modified: throttle(event => {
-          return onModified(event);
-        }, 300),
-      };
-
-      return actions[action](event);
+      return MEASUREMENT_ACTION_MAP[action](event);
     },
   };
 };

extensions/cornerstone/src/OHIFCornerstoneViewport.js

@@ -1,10 +1,10 @@
-import React, { Component } from 'react';
+import React, { Component } from "react";
 
-import ConnectedCornerstoneViewport from './ConnectedCornerstoneViewport';
-import OHIF from 'ohif-core';
-import PropTypes from 'prop-types';
-import cornerstone from 'cornerstone-core';
-import handleSegmentationStorage from './handleSegmentationStorage.js';
+import ConnectedCornerstoneViewport from "./ConnectedCornerstoneViewport";
+import OHIF from "@ohif/core";
+import PropTypes from "prop-types";
+import cornerstone from "cornerstone-core";
+import handleSegmentationStorage from "./handleSegmentationStorage.js";
 
 const { StackManager } = OHIF.utils;
 
@@ -18,7 +18,7 @@ cornerstone.metaData.addProvider(
 StackManager.setMetadataProvider(metadataProvider);
 
 const SOP_CLASSES = {
-  SEGMENTATION_STORAGE: '1.2.840.10008.5.1.4.1.1.66.4',
+  SEGMENTATION_STORAGE: "1.2.840.10008.5.1.4.1.1.66.4"
 };
 
 const specialCaseHandlers = {};
@@ -28,11 +28,11 @@ specialCaseHandlers[
 
 class OHIFCornerstoneViewport extends Component {
   state = {
-    viewportData: null,
+    viewportData: null
   };
 
   static defaultProps = {
-    customProps: {},
+    customProps: {}
   };
 
   static propTypes = {
@@ -40,17 +40,17 @@ class OHIFCornerstoneViewport extends Component {
     displaySet: PropTypes.object,
     viewportIndex: PropTypes.number,
     children: PropTypes.node,
-    customProps: PropTypes.object,
+    customProps: PropTypes.object
   };
 
-  static id = 'OHIFCornerstoneViewport';
+  static id = "OHIFCornerstoneViewport";
 
   static init() {
-    console.log('OHIFCornerstoneViewport init()');
+    console.log("OHIFCornerstoneViewport init()");
   }
 
   static destroy() {
-    console.log('OHIFCornerstoneViewport destroy()');
+    console.log("OHIFCornerstoneViewport destroy()");
     StackManager.clearStacks();
   }
 
@@ -72,15 +72,15 @@ class OHIFCornerstoneViewport extends Component {
     frameIndex = 0
   ) {
     if (!studies || !studies.length) {
-      throw new Error('Studies not provided.');
+      throw new Error("Studies not provided.");
     }
 
     if (!studyInstanceUid) {
-      throw new Error('StudyInstanceUID not provided.');
+      throw new Error("StudyInstanceUID not provided.");
     }
 
     if (!displaySetInstanceUid) {
-      throw new Error('StudyInstanceUID not provided.');
+      throw new Error("StudyInstanceUID not provided.");
     }
 
     // Create shortcut to displaySet
@@ -89,7 +89,7 @@ class OHIFCornerstoneViewport extends Component {
     );
 
     if (!study) {
-      throw new Error('Study not found.');
+      throw new Error("Study not found.");
     }
 
     const displaySet = study.displaySets.find(set => {
@@ -97,7 +97,7 @@ class OHIFCornerstoneViewport extends Component {
     });
 
     if (!displaySet) {
-      throw new Error('Display Set not found.');
+      throw new Error("Display Set not found.");
     }
 
     // Get stack from Stack Manager
@@ -110,7 +110,7 @@ class OHIFCornerstoneViewport extends Component {
     if (sopInstanceUid) {
       const index = stack.imageIds.findIndex(imageId => {
         const sopCommonModule = cornerstone.metaData.get(
-          'sopCommonModule',
+          "sopCommonModule",
           imageId
         );
         if (!sopCommonModule) {
@@ -124,7 +124,7 @@ class OHIFCornerstoneViewport extends Component {
         stack.currentImageIdIndex = index;
       } else {
         console.warn(
-          'SOPInstanceUID provided was not found in specified DisplaySet'
+          "SOPInstanceUID provided was not found in specified DisplaySet"
         );
       }
     }
@@ -183,7 +183,7 @@ class OHIFCornerstoneViewport extends Component {
         viewportData = {
           studyInstanceUid,
           displaySetInstanceUid,
-          stack,
+          stack
         };
 
         break;
@@ -199,12 +199,16 @@ class OHIFCornerstoneViewport extends Component {
       displaySetInstanceUid,
       sopClassUids,
       sopInstanceUid,
-      frameIndex,
+      frameIndex
     } = displaySet;
 
+    if (!studyInstanceUid || !displaySetInstanceUid) {
+      return;
+    }
+
     if (sopClassUids && sopClassUids.length > 1) {
       console.warn(
-        'More than one SOPClassUid in the same series is not yet supported.'
+        "More than one SOPClassUid in the same series is not yet supported."
       );
     }
 
@@ -219,7 +223,7 @@ class OHIFCornerstoneViewport extends Component {
       frameIndex
     ).then(viewportData => {
       this.setState({
-        viewportData,
+        viewportData
       });
     });
   }
@@ -250,7 +254,7 @@ class OHIFCornerstoneViewport extends Component {
       childrenWithProps = this.props.children.map((child, index) => {
         return React.cloneElement(child, {
           viewportIndex: this.props.viewportIndex,
-          key: index,
+          key: index
         });
       });
     }

extensions/cornerstone/src/commandsModule.js

@@ -1,5 +1,7 @@
 import cornerstone from 'cornerstone-core';
 import cornerstoneTools from 'cornerstone-tools';
+import OHIF from '@ohif/core';
+const scroll = cornerstoneTools.import('util/scroll');
 
 const actions = {
   rotateViewport: ({ viewports, rotation }) => {
@@ -89,15 +91,76 @@ const actions = {
     // TODO
     console.warn('updateDisplaySet: ', direction);
   },
-  clearAnnotations: () => {
-    console.warn('clearAnnotations: not yet implemented');
-    // const toolState =
-    //   cornerstoneTools.globalImageIdSpecificToolStateManager.toolState;
-    // if (!toolState) return;
-    // Object.keys(toolState).forEach(imageId => {
-    //   if (!cornerstoneImageId || cornerstoneImageId === imageId)
-    //     delete toolState[imageId];
-    // });
+  clearAnnotations: ({ viewports }) => {
+    const element = _getActiveViewportEnabledElement(
+      viewports.viewportSpecificData,
+      viewports.activeViewportIndex
+    );
+    if (!element) {
+      return;
+    }
+
+    const enabledElement = cornerstone.getEnabledElement(element);
+    if (!enabledElement || !enabledElement.image) {
+      return;
+    }
+
+    const {
+      toolState,
+    } = cornerstoneTools.globalImageIdSpecificToolStateManager;
+    if (
+      !toolState ||
+      toolState.hasOwnProperty(enabledElement.image.imageId) === false
+    ) {
+      return;
+    }
+
+    const imageIdToolState = toolState[enabledElement.image.imageId];
+
+    const measurementsToRemove = [];
+
+    Object.keys(imageIdToolState).forEach(toolType => {
+      const { data } = imageIdToolState[toolType];
+
+      data.forEach(measurementData => {
+        const { _id, lesionNamingNumber, measurementNumber } = measurementData;
+        if (!_id) {
+          return;
+        }
+
+        measurementsToRemove.push({
+          toolType,
+          _id,
+          lesionNamingNumber,
+          measurementNumber,
+        });
+      });
+    });
+
+    measurementsToRemove.forEach(measurementData => {
+      OHIF.measurements.MeasurementHandlers.onRemoved({
+        detail: {
+          toolType: measurementData.toolType,
+          measurementData,
+        },
+      });
+    });
+  },
+  nextImage: ({ viewports }) => {
+    const enabledElement = _getActiveViewportEnabledElement(
+      viewports.viewportSpecificData,
+      viewports.activeViewportIndex
+    );
+
+    scroll(enabledElement, 1);
+  },
+  previousImage: ({ viewports }) => {
+    const enabledElement = _getActiveViewportEnabledElement(
+      viewports.viewportSpecificData,
+      viewports.activeViewportIndex
+    );
+
+    scroll(enabledElement, -1);
   },
 };
 
@@ -147,8 +210,21 @@ const definitions = {
     storeContexts: ['viewports'],
     options: {},
   },
-  // TODO: Clear Annotations
-  // TODO: Next/Previous image
+  clearAnnotations: {
+    commandFn: actions.clearAnnotations,
+    storeContexts: ['viewports'],
+    options: {},
+  },
+  nextImage: {
+    commandFn: actions.nextImage,
+    storeContexts: ['viewports'],
+    options: {},
+  },
+  previousImage: {
+    commandFn: actions.previousImage,
+    storeContexts: ['viewports'],
+    options: {},
+  },
   // TODO: First/Last image
   // Next/Previous series/DisplaySet
   nextViewportDisplaySet: {

extensions/cornerstone/src/handleSegmentationStorage.js

@@ -1,8 +1,8 @@
-import * as dcmjs from 'dcmjs';
+import * as dcmjs from "dcmjs";
 
-import OHIF from 'ohif-core';
-import cornerstone from 'cornerstone-core';
-import cornerstoneTools from 'cornerstone-tools';
+import OHIF from "@ohif/core";
+import cornerstone from "cornerstone-core";
+import cornerstoneTools from "cornerstone-tools";
 
 const { StackManager } = OHIF.utils;
 
@@ -56,7 +56,7 @@ function retrieveDicomData(wadoUri) {
   // TODO: Authorization header depends on the server. If we ever have multiple servers
   // we will need to figure out how / when to pass this information in.
   return fetch(wadoUri, {
-    headers: OHIF.DICOMWeb.getAuthorizationHeader(),
+    headers: OHIF.DICOMWeb.getAuthorizationHeader()
   }).then(response => response.arrayBuffer());
 }
 
@@ -91,7 +91,7 @@ async function handleSegmentationStorage(
 
   if (displaySets.length > 1) {
     console.warn(
-      'More than one display set with the same seriesInstanceUid. This is not supported yet...'
+      "More than one display set with the same seriesInstanceUid. This is not supported yet..."
     );
   }
 
@@ -100,7 +100,7 @@ async function handleSegmentationStorage(
   const results = parseSeg(arrayBuffer, imageIds);
 
   if (!results) {
-    throw new Error('Fractional segmentations are not supported');
+    throw new Error("Fractional segmentations are not supported");
   }
 
   const { segMetadata, toolState } = results;
@@ -123,7 +123,7 @@ async function handleSegmentationStorage(
   return {
     studyInstanceUid,
     displaySetInstanceUid,
-    stack,
+    stack
   };
 }
 

extensions/cornerstone/src/toolbarModule.js

@@ -17,7 +17,7 @@
 //  -- ACTIVE_ROUTE::VIEWER
 //  -- ACTIVE_VIEWPORT::CORNERSTONE
 // setToolActive commands should receive the button event that triggered
-// so we can do the "bind to this butyon" magic
+// so we can do the "bind to this button" magic
 
 const TOOLBAR_BUTTON_TYPES = {
   COMMAND: 'command',
@@ -98,6 +98,98 @@ const definitions = [
       behavior: 'CINE',
     },
   },
+  {
+    id: 'More',
+    label: 'More',
+    icon: 'ellipse-circle',
+    buttons: [
+      {
+        id: 'Magnify',
+        label: 'Magnify',
+        icon: 'circle',
+        //
+        type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
+        commandName: 'setToolActive',
+        commandOptions: { toolName: 'Magnify' },
+      },
+      {
+        id: 'WwwcRegion',
+        label: 'ROI Window',
+        icon: 'stop',
+        //
+        type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
+        commandName: 'setToolActive',
+        commandOptions: { toolName: 'WwwcRegion' },
+      },
+      {
+        id: 'DragProbe',
+        label: 'Probe',
+        icon: 'dot-circle',
+        //
+        type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
+        commandName: 'setToolActive',
+        commandOptions: { toolName: 'DragProbe' },
+      },
+      {
+        id: 'EllipticalRoi',
+        label: 'Ellipse',
+        icon: 'circle-o',
+        //
+        type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
+        commandName: 'setToolActive',
+        commandOptions: { toolName: 'EllipticalRoi' },
+      },
+      {
+        id: 'RectangleRoi',
+        label: 'Rectangle',
+        icon: 'square-o',
+        //
+        type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
+        commandName: 'setToolActive',
+        commandOptions: { toolName: 'RectangleRoi' },
+      },
+      {
+        id: 'Invert',
+        label: 'Invert',
+        icon: 'adjust',
+        //
+        type: TOOLBAR_BUTTON_TYPES.COMMAND,
+        commandName: 'invertViewport',
+      },
+      {
+        id: 'RotateRight',
+        label: 'Rotate Right',
+        icon: 'rotate-right',
+        //
+        type: TOOLBAR_BUTTON_TYPES.COMMAND,
+        commandName: 'rotateViewportCW',
+      },
+      {
+        id: 'FlipH',
+        label: 'Flip H',
+        icon: 'ellipse-h',
+        //
+        type: TOOLBAR_BUTTON_TYPES.COMMAND,
+        commandName: 'flipViewportHorizontal',
+      },
+      {
+        id: 'FlipV',
+        label: 'Flip V',
+        icon: 'ellipse-v',
+        //
+        type: TOOLBAR_BUTTON_TYPES.COMMAND,
+        commandName: 'flipViewportVertical',
+      },
+      {
+        id: 'Clear',
+        label: 'Clear',
+        icon: 'trash',
+        //
+        type: TOOLBAR_BUTTON_TYPES.COMMAND,
+        commandName: 'clearAnnotations',
+      },
+    ],
+  },
 ];
 
 export default {

extensions/dicom-html/.webpack/webpack.dev.js

@@ -0,0 +1,16 @@
+const path = require('path');
+const merge = require('webpack-merge');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+
+//
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-development
+    mode: 'development',
+  });
+};

extensions/dicom-html/.webpack/webpack.prod.js

@@ -0,0 +1,39 @@
+const merge = require('webpack-merge');
+const path = require('path');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+const pkg = require('./../package.json');
+
+const ROOT_DIR = path.join(__dirname, './..');
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-production
+    mode: 'production',
+    devtool: 'source-map',
+    stats: {
+      colors: true,
+      hash: true,
+      timings: true,
+      assets: true,
+      chunks: false,
+      chunkModules: false,
+      modules: false,
+      children: false,
+      warnings: true,
+    },
+    optimization: {
+      minimize: true,
+      sideEffects: true,
+    },
+    output: {
+      path: ROOT_DIR,
+      library: 'ohifExtensionDicomHtml',
+      libraryTarget: 'umd',
+      filename: pkg.main,
+    },
+  });
+};

extensions/dicom-html/CHANGELOG.md

@@ -0,0 +1,98 @@
+# Change Log
+
+All notable changes to this project will be documented in this file.
+See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.50.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.50.0-alpha.10...@ohif/extension-dicom-html@0.50.1) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
+# [0.50.0-alpha.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.9...@ohif/extension-dicom-html@0.50.0-alpha.10) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
+## [0.0.4-alpha.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.8...@ohif/extension-dicom-html@0.0.4-alpha.9) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
+## 0.0.4-alpha.8 (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.6...@ohif/extension-dicom-html@0.0.4-alpha.7) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.5...@ohif/extension-dicom-html@0.0.4-alpha.6) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.4...@ohif/extension-dicom-html@0.0.4-alpha.5) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.3...@ohif/extension-dicom-html@0.0.4-alpha.4) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.2...@ohif/extension-dicom-html@0.0.4-alpha.3) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.4-alpha.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.1...@ohif/extension-dicom-html@0.0.4-alpha.2) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+## [0.0.4-alpha.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@0.0.4-alpha.0...@ohif/extension-dicom-html@0.0.4-alpha.1) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+## 0.0.4-alpha.0 (2019-08-05)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html

extensions/dicom-html/README.md

@@ -0,0 +1 @@
+# @ohif/extension-dicom-html

extensions/dicom-html/app.css

@@ -0,0 +1 @@
+:root{--text-color-primary:#fff}.DicomHtmlViewport{padding:20px;overflow-y:scroll;width:100%;height:100%;color:#fff;color:var(--text-color-primary)}

extensions/dicom-html/package.json

@@ -0,0 +1,40 @@
+{
+  "name": "@ohif/extension-dicom-html",
+  "version": "0.50.1",
+  "description": "OHIF extension for rendering structured reports to HTML",
+  "author": "OHIF",
+  "license": "MIT",
+  "repository": "OHIF/Viewers",
+  "main": "dist/index.umd.js",
+  "module": "src/index.js",
+  "engines": {
+    "node": ">=10",
+    "npm": ">=6",
+    "yarn": ">=1.16.0"
+  },
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "publishConfig": {
+    "access": "public"
+  },
+  "scripts": {
+    "dev": "webpack --config .webpack/webpack.dev.js --watch --debug --output-pathinfo",
+    "dev:dicom-html": "yarn run dev",
+    "build": "webpack --config .webpack/webpack.prod.js",
+    "build:package": "yarn run build",
+    "prepublishOnly": "yarn run build",
+    "start": "yarn run dev"
+  },
+  "peerDependencies": {
+    "@ohif/core": "^0.50.0",
+    "dcmjs": "^0.3.3",
+    "prop-types": "^15.6.2",
+    "react": "^15.0.0 || ^16.0.0",
+    "react-dom": "^15.0.0 || ^16.0.0"
+  },
+  "dependencies": {
+    "@babel/runtime": "^7.5.5"
+  }
+}

extensions/dicom-html/src/OHIFDicomHtmlSopClassHandler.js

@@ -1,4 +1,4 @@
-import { MODULE_TYPES, utils } from 'ohif-core';
+import { MODULE_TYPES, utils } from '@ohif/core';
 
 // TODO: Should probably use dcmjs for this
 const SOP_CLASS_UIDS = {
@@ -8,7 +8,7 @@ const SOP_CLASS_UIDS = {
   PROCEDURE_LOG_STORAGE: '1.2.840.10008.5.1.4.1.1.88.40',
   MAMMOGRAPHY_CAD_SR: '1.2.840.10008.5.1.4.1.1.88.50',
   CHEST_CAD_SR: '1.2.840.10008.5.1.4.1.1.88.65',
-  X_RAY_RADIATION_DOSE_SR: '1.2.840.10008.5.1.4.1.1.88.67'
+  X_RAY_RADIATION_DOSE_SR: '1.2.840.10008.5.1.4.1.1.88.67',
 };
 
 const sopClassUids = Object.values(SOP_CLASS_UIDS);
@@ -24,15 +24,16 @@ const OHIFDicomHtmlSopClassHandler = {
 
     return {
       plugin: 'html',
+      modality: 'SR',
       displaySetInstanceUid: utils.guid(),
       wadoRoot: study.getData().wadoRoot,
       wadoUri: instance.getData().wadouri,
       sopInstanceUid: instance.getSOPInstanceUID(),
       seriesInstanceUid: series.getSeriesInstanceUID(),
       studyInstanceUid: study.getStudyInstanceUID(),
-      authorizationHeaders
+      authorizationHeaders,
     };
-  }
+  },
 };
 
 export default OHIFDicomHtmlSopClassHandler;

extensions/dicom-microscopy/.webpack/webpack.dev.js

@@ -0,0 +1,16 @@
+const path = require('path');
+const merge = require('webpack-merge');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+
+//
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-development
+    mode: 'development',
+  });
+};

extensions/dicom-microscopy/.webpack/webpack.prod.js

@@ -0,0 +1,39 @@
+const merge = require('webpack-merge');
+const path = require('path');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+const pkg = require('./../package.json');
+
+const ROOT_DIR = path.join(__dirname, './..');
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-production
+    mode: 'production',
+    devtool: 'source-map',
+    stats: {
+      colors: true,
+      hash: true,
+      timings: true,
+      assets: true,
+      chunks: false,
+      chunkModules: false,
+      modules: false,
+      children: false,
+      warnings: true,
+    },
+    optimization: {
+      minimize: true,
+      sideEffects: true,
+    },
+    output: {
+      path: ROOT_DIR,
+      library: 'ohifExtensionDicomMicroscopy',
+      libraryTarget: 'umd',
+      filename: pkg.main,
+    },
+  });
+};

extensions/dicom-microscopy/CHANGELOG.md

@@ -0,0 +1,98 @@
+# Change Log
+
+All notable changes to this project will be documented in this file.
+See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.50.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.50.0-alpha.10...@ohif/extension-dicom-microscopy@0.50.1) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+
+
+
+
+# [0.50.0-alpha.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.9...@ohif/extension-dicom-microscopy@0.50.0-alpha.10) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+
+
+
+
+## [0.0.9-alpha.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.8...@ohif/extension-dicom-microscopy@0.0.9-alpha.9) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+
+
+
+
+## 0.0.9-alpha.8 (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+
+
+
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.6...@ohif/extension-dicom-microscopy@0.0.9-alpha.7) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.5...@ohif/extension-dicom-microscopy@0.0.9-alpha.6) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.4...@ohif/extension-dicom-microscopy@0.0.9-alpha.5) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.3...@ohif/extension-dicom-microscopy@0.0.9-alpha.4) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.2...@ohif/extension-dicom-microscopy@0.0.9-alpha.3) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.9-alpha.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.1...@ohif/extension-dicom-microscopy@0.0.9-alpha.2) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+## [0.0.9-alpha.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.0.9-alpha.0...@ohif/extension-dicom-microscopy@0.0.9-alpha.1) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+## 0.0.9-alpha.0 (2019-08-05)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy

extensions/dicom-microscopy/package.json

@@ -0,0 +1,40 @@
+{
+  "name": "@ohif/extension-dicom-microscopy",
+  "version": "0.50.1",
+  "description": "OHIF extension for Dicom Microscopy",
+  "author": "OHIF",
+  "license": "MIT",
+  "repository": "OHIF/Viewers",
+  "main": "dist/index.umd.js",
+  "module": "src/index.js",
+  "publishConfig": {
+    "access": "public"
+  },
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "engines": {
+    "node": ">=10",
+    "npm": ">=6",
+    "yarn": ">=1.16.0"
+  },
+  "scripts": {
+    "dev": "webpack --config .webpack/webpack.dev.js --watch --debug --output-pathinfo",
+    "dev:dicom-microscopy": "yarn run dev",
+    "build": "webpack --config .webpack/webpack.prod.js",
+    "build:package": "yarn run build",
+    "prepublishOnly": "yarn run build",
+    "start": "yarn run dev"
+  },
+  "peerDependencies": {
+    "@ohif/core": "^0.50.0",
+    "react": "^15.0.0 || ^16.0.0",
+    "react-dom": "^15.0.0 || ^16.0.0"
+  },
+  "dependencies": {
+    "@babel/runtime": "^7.5.5",
+    "classnames": "^2.2.6",
+    "dicom-microscopy-viewer": "^0.4.3"
+  }
+}

extensions/dicom-microscopy/src/DicomMicroscopySopClassHandler.js

@@ -1,4 +1,4 @@
-import OHIF from 'ohif-core';
+import OHIF from '@ohif/core';
 
 const { utils } = OHIF;
 
@@ -16,6 +16,7 @@ const DicomMicroscopySopClassHandler = {
 
     return {
       plugin: 'microscopy',
+      modality: 'SM',
       displaySetInstanceUid: utils.guid(),
       dicomWebClient,
       sopInstanceUid: instance.getSOPInstanceUID(),

extensions/dicom-microscopy/src/DicomMicroscopyViewport.js

@@ -1,6 +1,7 @@
 import React, { Component } from 'react';
-
+import ReactResizeDetector from 'react-resize-detector';
 import { api } from 'dicom-microscopy-viewer';
+import debounce from 'lodash.debounce';
 
 const microscopyViewer = api.VLWholeSlideMicroscopyImageViewer;
 
@@ -9,10 +10,16 @@ class DicomMicroscopyViewport extends Component {
     error: null,
   };
 
+  viewer = null;
+
   constructor(props) {
     super(props);
 
     this.container = React.createRef();
+
+    this.debouncedResize = debounce(() => {
+      if (this.viewer) this.viewer.resize();
+    }, 100);
   }
 
   // install the microscopy renderer into the web page.
@@ -52,17 +59,18 @@ class DicomMicroscopyViewport extends Component {
       .then(metadata => {
         metadata = metadata.filter(m => m);
 
-        const viewer = new microscopyViewer({
+        this.viewer = new microscopyViewer({
           client: dicomWebClient,
           metadata,
+          retrieveRendered: false
         });
 
-        viewer.render({ container, retrieveRendered: true });
+        this.viewer.render({ container });
       });
   }
 
   componentDidMount() {
-    const { studies, displaySet } = this.props.viewportData;
+    const { displaySet } = this.props.viewportData;
 
     this.installOpenLayersRenderer(this.container.current, displaySet);
   }
@@ -71,6 +79,13 @@ class DicomMicroscopyViewport extends Component {
     const style = { width: '100%', height: '100%' };
     return (
       <div className={'DicomMicroscopyViewer'} style={style}>
+        {ReactResizeDetector && (
+          <ReactResizeDetector
+            handleWidth
+            handleHeight
+            onResize={this.onWindowResize}
+          />
+        )}
         {this.state.error ? (
           <h2>{JSON.stringify(this.state.error)}</h2>
         ) : (
@@ -79,6 +94,10 @@ class DicomMicroscopyViewport extends Component {
       </div>
     );
   }
+
+  onWindowResize = () => {
+    this.debouncedResize();
+  };
 }
 
 export default DicomMicroscopyViewport;

extensions/dicom-pdf/.webpack/webpack.dev.js

@@ -0,0 +1,16 @@
+const path = require('path');
+const merge = require('webpack-merge');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+
+//
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-development
+    mode: 'development',
+  });
+};

extensions/dicom-pdf/.webpack/webpack.prod.js

@@ -0,0 +1,39 @@
+const merge = require('webpack-merge');
+const path = require('path');
+const webpackCommon = require('./../../../.webpack/webpack.common.js');
+const pkg = require('./../package.json');
+
+const ROOT_DIR = path.join(__dirname, './..');
+const SRC_DIR = path.join(__dirname, '../src');
+const DIST_DIR = path.join(__dirname, '../dist');
+
+module.exports = (env, argv) => {
+  const commonConfig = webpackCommon(env, argv, { SRC_DIR, DIST_DIR });
+
+  return merge(commonConfig, {
+    // https://webpack.js.org/configuration/mode/#mode-production
+    mode: 'production',
+    devtool: 'source-map',
+    stats: {
+      colors: true,
+      hash: true,
+      timings: true,
+      assets: true,
+      chunks: false,
+      chunkModules: false,
+      modules: false,
+      children: false,
+      warnings: true,
+    },
+    optimization: {
+      minimize: true,
+      sideEffects: true,
+    },
+    output: {
+      path: ROOT_DIR,
+      library: 'ohifExtensionDicomPdf',
+      libraryTarget: 'umd',
+      filename: pkg.main,
+    },
+  });
+};

extensions/dicom-pdf/CHANGELOG.md

@@ -0,0 +1,98 @@
+# Change Log
+
+All notable changes to this project will be documented in this file.
+See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.50.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.50.0-alpha.10...@ohif/extension-dicom-pdf@0.50.1) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+
+
+
+
+# [0.50.0-alpha.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.9...@ohif/extension-dicom-pdf@0.50.0-alpha.10) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+
+
+
+
+## [0.0.8-alpha.9](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.8...@ohif/extension-dicom-pdf@0.0.8-alpha.9) (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+
+
+
+
+## 0.0.8-alpha.8 (2019-08-14)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+
+
+
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.6...@ohif/extension-dicom-pdf@0.0.8-alpha.7) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.5...@ohif/extension-dicom-pdf@0.0.8-alpha.6) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.4...@ohif/extension-dicom-pdf@0.0.8-alpha.5) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.3...@ohif/extension-dicom-pdf@0.0.8-alpha.4) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.2...@ohif/extension-dicom-pdf@0.0.8-alpha.3) (2019-08-08)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+# Change Log
+
+All notable changes to this project will be documented in this file. See
+[Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.0.8-alpha.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.1...@ohif/extension-dicom-pdf@0.0.8-alpha.2) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+## [0.0.8-alpha.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@0.0.8-alpha.0...@ohif/extension-dicom-pdf@0.0.8-alpha.1) (2019-08-07)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+## 0.0.8-alpha.0 (2019-08-05)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf

extensions/dicom-pdf/README.md

@@ -0,0 +1 @@
+# @ohif/extension-dicom-pdf

extensions/dicom-pdf/package.json

@@ -0,0 +1,43 @@
+{
+  "name": "@ohif/extension-dicom-pdf",
+  "version": "0.50.1",
+  "description": "OHIF extension for Dicom PDF",
+  "author": "OHIF",
+  "license": "MIT",
+  "repository": "OHIF/Viewers",
+  "main": "dist/index.umd.js",
+  "module": "src/index.js",
+  "publishConfig": {
+    "access": "public"
+  },
+  "engines": {
+    "node": ">=10",
+    "npm": ">=6",
+    "yarn": ">=1.16.0"
+  },
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "scripts": {
+    "dev": "webpack --config .webpack/webpack.dev.js --watch --debug --output-pathinfo",
+    "dev:dicom-pdf": "yarn run dev",
+    "build": "webpack --config .webpack/webpack.prod.js",
+    "build:package": "yarn run build",
+    "prepublishOnly": "yarn run build",
+    "start": "yarn run dev"
+  },
+  "peerDependencies": {
+    "@ohif/core": "^0.50.0",
+    "dicom-parser": "^1.8.3",
+    "prop-types": "^15.6.2",
+    "react": "^15.0.0 || ^16.0.0",
+    "react-dom": "^15.0.0 || ^16.0.0"
+  },
+  "dependencies": {
+    "@babel/runtime": "^7.5.5",
+    "classnames": "^2.2.6",
+    "lodash.isequal": "^4.5.0"
+  },
+  "gitHead": "a5baa9228c0eda0df880136bde4420d78e6f8706"
+}

extensions/dicom-pdf/src/OHIFDicomPDFSopClassHandler.js

@@ -1,8 +1,8 @@
-import { MODULE_TYPES, utils } from 'ohif-core';
+import { MODULE_TYPES, utils } from '@ohif/core';
 
 // TODO: Should probably use dcmjs for this
 const SOP_CLASS_UIDS = {
-  ENCAPSULATED_PDF: '1.2.840.10008.5.1.4.1.1.104.1'
+  ENCAPSULATED_PDF: '1.2.840.10008.5.1.4.1.1.104.1',
 };
 
 const OHIFDicomPDFSopClassHandler = {
@@ -14,15 +14,16 @@ const OHIFDicomPDFSopClassHandler = {
 
     return {
       plugin: 'pdf',
+      modality: 'DOC',
       displaySetInstanceUid: utils.guid(),
       wadoRoot: study.getData().wadoRoot,
       wadoUri: instance.getData().wadouri,
       sopInstanceUid: instance.getSOPInstanceUID(),
       seriesInstanceUid: series.getSeriesInstanceUID(),
       studyInstanceUid: study.getStudyInstanceUID(),
-      authorizationHeaders: authorizationHeaders
+      authorizationHeaders: authorizationHeaders,
     };
-  }
+  },
 };
 
 export default OHIFDicomPDFSopClassHandler;

extensions/dicom-pdf/src/OHIFDicomPDFViewport.js

@@ -1,8 +1,8 @@
-import React, { Component } from 'react';
-import PropTypes from 'prop-types';
-import OHIF from 'ohif-core';
-import OHIFComponentPlugin from './OHIFComponentPlugin.js';
-import DicomPDFViewport from './DicomPDFViewport';
+import React, { Component } from "react";
+import PropTypes from "prop-types";
+import OHIF from "@ohif/core";
+import OHIFComponentPlugin from "./OHIFComponentPlugin.js";
+import DicomPDFViewport from "./DicomPDFViewport";
 
 const { DICOMWeb } = OHIF;
 
@@ -18,44 +18,69 @@ class OHIFDicomPDFViewport extends Component {
     error: null
   };
 
-  static id = 'DicomPDFViewportPDF';
+  static id = "DicomPDFViewportPDF";
 
   static init() {
-    console.log('DicomPDFViewport init()');
+    console.log("DicomPDFViewport init()");
   }
 
   static destroy() {
-    console.log('DicomPDFViewport destroy()');
+    console.log("DicomPDFViewport destroy()");
   }
 
   componentDidMount() {
     const { displaySet } = this.props.viewportData;
-    const { studyInstanceUid, seriesInstanceUid, sopInstanceUid, wadoRoot, wadoUri, authorizationHeaders} = displaySet;
+    const {
+      studyInstanceUid,
+      seriesInstanceUid,
+      sopInstanceUid,
+      wadoRoot,
+      wadoUri,
+      authorizationHeaders
+    } = displaySet;
 
-    this.retrieveDicomData(studyInstanceUid, seriesInstanceUid, sopInstanceUid, wadoRoot, wadoUri, authorizationHeaders).then(byteArray => {
-      this.setState({
-        byteArray
-      });
-    }, error => {
-      this.setState({
-        error
-      });
+    this.retrieveDicomData(
+      studyInstanceUid,
+      seriesInstanceUid,
+      sopInstanceUid,
+      wadoRoot,
+      wadoUri,
+      authorizationHeaders
+    ).then(
+      byteArray => {
+        this.setState({
+          byteArray
+        });
+      },
+      error => {
+        this.setState({
+          error
+        });
 
         throw new Error(error);
       }
     );
   }
 
-  retrieveDicomData(studyInstanceUid, seriesInstanceUid, sopInstanceUid, wadoRoot, wadoUri, authorizationHeaders) {
+  retrieveDicomData(
+    studyInstanceUid,
+    seriesInstanceUid,
+    sopInstanceUid,
+    wadoRoot,
+    wadoUri,
+    authorizationHeaders
+  ) {
     // TODO: Passing in a lot of data we aren't using
 
     // TODO: Authorization header depends on the server. If we ever have multiple servers
     // we will need to figure out how / when to pass this information in.
     return fetch(wadoUri, {
       headers: authorizationHeaders
-    }).then(response => response.arrayBuffer()).then(arraybuffer => {
-      return new Uint8Array(arraybuffer);
-    });
+    })
+      .then(response => response.arrayBuffer())
+      .then(arraybuffer => {
+        return new Uint8Array(arraybuffer);
+      });
   }
 
   render() {

extensions/ohif-cornerstone-extension/.babelrc

@@ -1,14 +0,0 @@
-{
-  "presets": [
-    ["@babel/preset-env", {
-      "targets": {
-        "ie": "11"
-      }
-    }],
-    "@babel/preset-react"
-  ],
-  "plugins": [
-    "@babel/plugin-proposal-class-properties",
-    "@babel/plugin-transform-runtime"
-  ]
-}

extensions/ohif-cornerstone-extension/.editorconfig

@@ -1,9 +0,0 @@
-root = true
-
-[*]
-charset = utf-8
-indent_style = space
-indent_size = 2
-end_of_line = lf
-insert_final_newline = true
-trim_trailing_whitespace = true

extensions/ohif-cornerstone-extension/.eslintrc

@@ -1,16 +0,0 @@
-{
-  "extends": [
-  	"react-app",
-  	"eslint:recommended",
-    "plugin:react/recommended"
-  ],
-  "parser": "babel-eslint",
-  "env": {
-    "jest": true
-  },
-  "settings": {
-    "react": {
-      "version": "detect",
-    },
-  },
-}

extensions/ohif-cornerstone-extension/.gitignore

@@ -1,26 +0,0 @@
-
-# See https://help.github.com/ignore-files/ for more about ignoring files.
-
-# dependencies
-node_modules
-
-# builds
-build
-dist
-.rpt2_cache
-
-# misc
-.DS_Store
-.env
-.env.local
-.env.development.local
-.env.test.local
-.env.production.local
-
-npm-debug.log*
-yarn-debug.log*
-yarn-error.log*
-.idea
-
-yalc.lock
-.yalc

extensions/ohif-cornerstone-extension/.prettierrc

@@ -1,9 +0,0 @@
-{
-  "trailingComma": "es5",
-  "printWidth": 80,
-  "proseWrap": "always",
-  "tabWidth": 2,
-  "semi": true,
-  "singleQuote": true,
-  "endOfLine": "lf"
-}

extensions/ohif-cornerstone-extension/.travis.yml

@@ -1,4 +0,0 @@
-language: node_js
-node_js:
-  - 9
-  - 8

extensions/ohif-cornerstone-extension/package.json

@@ -1,101 +0,0 @@
-{
-  "name": "@ohif/extension-cornerstone",
-  "version": "0.0.38",
-  "description": "OHIF extension for Cornerstone",
-  "author": "OHIF",
-  "license": "MIT",
-  "repository": "OHIF/Viewers",
-  "main": "dist/index.umd.js",
-  "module": "dist/index.es.js",
-  "jsnext:main": "dist/index.es.js",
-  "engines": {
-    "node": ">=8",
-    "npm": ">=5"
-  },
-  "scripts": {
-    "build": "rollup -c",
-    "prepublishOnly": "npm run build",
-    "start": "rollup -c -w",
-    "lint": "eslint -c .eslintrc --fix src && prettier --single-quote --write src/**/*.{js,jsx,json,css}"
-  },
-  "peerDependencies": {
-    "cornerstone-core": "^2.2.8",
-    "cornerstone-math": "^0.1.8",
-    "cornerstone-tools": "^3.1.0",
-    "cornerstone-wado-image-loader": "^2.2.3",
-    "dcmjs": "^0.3.8",
-    "dicom-parser": "^1.8.3",
-    "hammerjs": "^2.0.8",
-    "ohif-core": "^0.6.0",
-    "prop-types": "^15.6.2",
-    "react": "^15.0.0 || ^16.0.0",
-    "react-dom": "^15.0.0 || ^16.0.0",
-    "react-redux": "^6.0.0",
-    "react-resize-detector": "^3.4.0",
-    "react-viewerbase": "^0.6.0",
-    "redux": "^4.0.1"
-  },
-  "dependencies": {
-    "@babel/runtime": "^7.2.0",
-    "classnames": "^2.2.6",
-    "lodash.throttle": "^4.1.1",
-    "react-cornerstone-viewport": "0.1.30"
-  },
-  "devDependencies": {
-    "@babel/core": "^7.2.2",
-    "@babel/plugin-external-helpers": "^7.2.0",
-    "@babel/plugin-proposal-class-properties": "^7.2.3",
-    "@babel/plugin-transform-runtime": "^7.2.0",
-    "@babel/preset-env": "^7.2.3",
-    "@babel/preset-react": "^7.0.0",
-    "babel-eslint": "^10.0.1",
-    "cross-env": "^5.2.0",
-    "eslint": "5.13.0",
-    "eslint-plugin-import": "^2.14.0",
-    "eslint-plugin-node": "^8.0.0",
-    "eslint-plugin-promise": "^4.0.1",
-    "eslint-plugin-react": "^7.11.1",
-    "gh-pages": "^2.0.1",
-    "husky": "^1.3.1",
-    "lint-staged": "^8.1.0",
-    "lodash.clonedeep": "^4.5.0",
-    "prettier": "^1.15.3",
-    "react": "^16.6.3",
-    "react-dom": "^16.6.3",
-    "rollup": "^1.1.2",
-    "rollup-plugin-babel": "^4.2.0",
-    "rollup-plugin-commonjs": "^9.2.0",
-    "rollup-plugin-node-builtins": "^2.1.2",
-    "rollup-plugin-node-resolve": "^4.0.0",
-    "rollup-plugin-peer-deps-external": "^2.2.0",
-    "rollup-plugin-postcss": "^2.0.3",
-    "rollup-plugin-url": "^2.1.0",
-    "stylelint": "^9.9.0",
-    "stylelint-config-recommended": "^2.1.0",
-    "stylus": "^0.54.5"
-  },
-  "husky": {
-    "hooks": {
-      "pre-commit": "lint-staged"
-    }
-  },
-  "lint-staged": {
-    "src/**/*.{js,jsx,json,css}": [
-      "prettier --single-quote --write",
-      "git add"
-    ]
-  },
-  "browserslist": [
-    ">0.2%",
-    "not dead",
-    "not ie <= 11",
-    "not op_mini all"
-  ],
-  "files": [
-    "dist",
-    "README.md"
-  ],
-  "publishConfig": {
-    "access": "public"
-  }
-}

extensions/ohif-cornerstone-extension/rollup.config.js

@@ -1,68 +0,0 @@
-import babel from 'rollup-plugin-babel'
-import commonjs from 'rollup-plugin-commonjs'
-import external from 'rollup-plugin-peer-deps-external'
-import postcss from 'rollup-plugin-postcss'
-import resolve from 'rollup-plugin-node-resolve'
-import url from 'rollup-plugin-url'
-import pkg from './package.json'
-// Deal with https://github.com/rollup/rollup-plugin-commonjs/issues/297
-import builtins from 'rollup-plugin-node-builtins';
-
-const globals =  {
-  'react': 'React',
-  'react-dom': 'ReactDOM',
-  'react-redux': 'ReactRedux',
-  'react-resize-detector': 'ReactResizeDetector',
-  'react-viewerbase': 'reactViewerbase',
-  'prop-types': 'PropTypes',
-  'cornerstone-core': 'cornerstone',
-  'cornerstone-wado-image-loader': 'cornerstoneWADOImageLoader',
-  'cornerstone-math': 'cornerstoneMath',
-  'cornerstone-tools': 'cornerstoneTools',
-  'dcmjs': 'dcmjs',
-  'dicom-parser': 'dicomParser',
-  'ohif-core': 'OHIF',
-  'hammerjs': 'Hammer'
-};
-
-export default {
-  input: 'src/index.js',
-  output: [
-    {
-      file: pkg.main,
-      format: 'umd',
-      name: 'ohif-cornerstone-extension',
-      sourcemap: true,
-      globals
-    },
-    {
-      file: pkg.module,
-      format: 'es',
-      sourcemap: true,
-      globals
-    }
-  ],
-  plugins: [
-    builtins(),
-    external(),
-    postcss({
-      modules: false
-    }),
-    url(),
-    babel({
-      exclude: 'node_modules/**',
-      externalHelpers: true,
-      runtimeHelpers: true
-    }),
-    resolve(),
-    commonjs({
-      include: 'node_modules/**',
-      namedExports: {
-          'node_modules/react-is/index.js': [
-            'isValidElementType'
-          ]
-      }
-    })
-  ],
-  external: Object.keys(pkg.peerDependencies || {}),
-}

extensions/ohif-dicom-html-extension/.babelrc

@@ -1,14 +0,0 @@
-{
-  "presets": [
-    ["@babel/preset-env", {
-      "targets": {
-        "ie": "11"
-      }
-    }],
-    "@babel/preset-react"
-  ],
-  "plugins": [
-    "@babel/plugin-proposal-class-properties",
-    "@babel/plugin-transform-runtime"
-  ]
-}

extensions/ohif-dicom-html-extension/.editorconfig

@@ -1,9 +0,0 @@
-root = true
-
-[*]
-charset = utf-8
-indent_style = space
-indent_size = 2
-end_of_line = lf
-insert_final_newline = true
-trim_trailing_whitespace = true