chore(release): publish [skip ci]

- @ohif/extension-cornerstone@2.9.3 - @ohif/extension-dicom-html@1.2.6 - @ohif/extension-dicom-rt@0.4.2 - @ohif/extension-dicom-segmentation@0.4.2 - @ohif/extension-vtk@1.7.3 - @ohif/core@2.10.2 - @ohif/viewer@4.5.4
[IDC-2017] Harden segmentation import to support more SEGs (#2024 )
2020-09-02 12:19:23 +00:00 · 2020-09-02 14:17:30 +02:00 · 2020-08-28 15:52:27 +00:00 · 2020-08-28 17:51:08 +02:00 · 2020-08-24 09:45:34 +00:00 · 2020-08-24 11:44:09 +02:00
44 changed files with 760 additions and 300 deletions
@@ -11,6 +11,7 @@ node -v

 # Install build deps and all monorepo package dependencies. Yarn Workspaces
 # should also symlink all projects appropriately
+yarn run lerna:restore
 yarn install --no-ignore-optional --pure-lockfile

 # Build && Move PWA Output
@@ -3,6 +3,47 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [2.9.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.2...@ohif/extension-cornerstone@2.9.3) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/extension-cornerstone
+
+
+
+
+
+## [2.9.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.1...@ohif/extension-cornerstone@2.9.2) (2020-08-20)
+
+
+### Bug Fixes
+
+* Updated react-cornerstone-viewport to version 4.0.2 ([#2001](https://github.com/OHIF/Viewers/issues/2001)) ([59ab68b](https://github.com/OHIF/Viewers/commit/59ab68b4edbfec010170c4429c300a53f688bf94))
+
+
+
+
+
+## [2.9.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.9.0...@ohif/extension-cornerstone@2.9.1) (2020-08-20)
+
+
+### Performance Improvements
+
+* **stackPrefetch:** Added stackPrefetch config with 20 max concurrent requests ([#2000](https://github.com/OHIF/Viewers/issues/2000)) ([3b02a06](https://github.com/OHIF/Viewers/commit/3b02a06f5e250660edde4862ce44147db3dc3ab9))
+
+
+
+
+
+# [2.9.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.5...@ohif/extension-cornerstone@2.9.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
 ## [2.8.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-cornerstone@2.8.4...@ohif/extension-cornerstone@2.8.5) (2020-08-05)

 **Note:** Version bump only for package @ohif/extension-cornerstone
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-cornerstone",
-  "version": "2.8.5",
+  "version": "2.9.3",
  "description": "OHIF extension for Cornerstone",
  "author": "OHIF",
  "license": "MIT",
@@ -34,9 +34,9 @@
    "@ohif/ui": "^0.50.0",
    "cornerstone-core": "^2.2.8",
    "cornerstone-math": "^0.1.8",
-    "cornerstone-tools": "4.15.1",
+    "cornerstone-tools": "^4.20.1",
    "cornerstone-wado-image-loader": "^3.1.0",
-    "dcmjs": "0.16.0",
+    "dcmjs": "0.16.3",
    "dicom-parser": "^1.8.3",
    "hammerjs": "^2.0.8",
    "prop-types": "^15.6.2",
@@ -51,6 +51,6 @@
    "classnames": "^2.2.6",
    "lodash.merge": "^4.6.2",
    "lodash.throttle": "^4.1.1",
-    "react-cornerstone-viewport": "4.0.1"
+    "react-cornerstone-viewport": "4.0.2"
  }
 }
@@ -34,4 +34,11 @@ export default function(configuration = {}) {
  cornerstoneTools.toolColors.setActiveColor('rgb(0, 255, 0)');

  cornerstoneTools.store.state.touchProximity = 40;
+
+  // Configure stack prefetch
+  cornerstoneTools.stackPrefetch.setConfiguration({
+    maxImagesToPrefetch: Infinity,
+    preserveExistingPool: false,
+    maxSimultaneousRequests: 20,
+  });
 }
@@ -3,6 +3,22 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [1.2.6](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.5...@ohif/extension-dicom-html@1.2.6) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
+## [1.2.5](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.4...@ohif/extension-dicom-html@1.2.5) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-dicom-html
+
+
+
+
+
 ## [1.2.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-html@1.2.3...@ohif/extension-dicom-html@1.2.4) (2020-07-13)

 **Note:** Version bump only for package @ohif/extension-dicom-html
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-dicom-html",
-  "version": "1.2.4",
+  "version": "1.2.6",
  "description": "OHIF extension for rendering structured reports to HTML",
  "author": "OHIF",
  "license": "MIT",
@@ -29,7 +29,7 @@
  },
  "peerDependencies": {
    "@ohif/core": "^0.50.0",
-    "dcmjs": "0.16.0",
+    "dcmjs": "0.16.3",
    "prop-types": "^15.6.2",
    "react": "^16.8.6",
    "react-dom": "^16.8.6"
@@ -22,6 +22,12 @@ const OHIFDicomHtmlSopClassHandler = {
  getDisplaySetFromSeries(series, study, dicomWebClient, authorizationHeaders) {
    const instance = series.getFirstInstance();

+    const {
+      SeriesDate,
+      SeriesTime,
+      SeriesNumber,
+    } = instance._instance.metadata;
+
    return {
      plugin: 'html',
      Modality: 'SR',
@@ -31,6 +37,9 @@ const OHIFDicomHtmlSopClassHandler = {
      SOPInstanceUID: instance.getSOPInstanceUID(),
      SeriesInstanceUID: series.getSeriesInstanceUID(),
      StudyInstanceUID: study.getStudyInstanceUID(),
+      SeriesDate,
+      SeriesTime,
+      SeriesNumber,
      authorizationHeaders,
    };
  },
@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [0.51.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.51.0...@ohif/extension-dicom-microscopy@0.51.1) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-dicom-microscopy
+
+
+
+
+
 # [0.51.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-microscopy@0.50.9...@ohif/extension-dicom-microscopy@0.51.0) (2020-06-04)


@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-dicom-microscopy",
-  "version": "0.51.0",
+  "version": "0.51.1",
  "description": "OHIF extension for Dicom Microscopy",
  "author": "OHIF",
  "license": "MIT",
@@ -12,6 +12,12 @@ const DicomMicroscopySopClassHandler = {
  getDisplaySetFromSeries(series, study, dicomWebClient) {
    const instance = series.getFirstInstance();

+    const {
+      ContentDate,
+      ContentTime,
+      SeriesNumber,
+    } = instance._instance.metadata;
+
    // Note: We are passing the dicomweb client into each viewport!

    return {
@@ -22,6 +28,9 @@ const DicomMicroscopySopClassHandler = {
      SOPInstanceUID: instance.getSOPInstanceUID(),
      SeriesInstanceUID: series.getSeriesInstanceUID(),
      StudyInstanceUID: study.getStudyInstanceUID(),
+      SeriesDate: ContentDate, // Map ContentDate/Time to SeriesTime for series list sorting.
+      SeriesTime: ContentTime,
+      SeriesNumber,
    };
  },
 };
@@ -3,6 +3,14 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [1.0.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@1.0.3...@ohif/extension-dicom-pdf@1.0.4) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-dicom-pdf
+
+
+
+
+
 ## [1.0.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-pdf@1.0.2...@ohif/extension-dicom-pdf@1.0.3) (2020-04-02)

 **Note:** Version bump only for package @ohif/extension-dicom-pdf
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-dicom-pdf",
-  "version": "1.0.3",
+  "version": "1.0.4",
  "description": "OHIF extension for Dicom PDF",
  "author": "OHIF",
  "license": "MIT",
@@ -12,6 +12,12 @@ const OHIFDicomPDFSopClassHandler = {
  getDisplaySetFromSeries(series, study, dicomWebClient, authorizationHeaders) {
    const instance = series.getFirstInstance();

+    const {
+      ContentDate,
+      ContentTime,
+      SeriesNumber,
+    } = instance._instance.metadata;
+
    return {
      plugin: 'pdf',
      Modality: 'DOC',
@@ -21,6 +27,9 @@ const OHIFDicomPDFSopClassHandler = {
      SOPInstanceUID: instance.getSOPInstanceUID(),
      SeriesInstanceUID: series.getSeriesInstanceUID(),
      StudyInstanceUID: study.getStudyInstanceUID(),
+      SeriesDate: ContentDate, // Map ContentDate/Time to SeriesTime for series list sorting.
+      SeriesTime: ContentTime,
+      SeriesNumber,
      authorizationHeaders: authorizationHeaders,
    };
  },
@@ -3,6 +3,44 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.1...@ohif/extension-dicom-rt@0.4.2) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/extension-dicom-rt
+
+
+
+
+
+## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.4.0...@ohif/extension-dicom-rt@0.4.1) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-dicom-rt
+
+
+
+
+
+# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.3.0...@ohif/extension-dicom-rt@0.4.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
+# [0.3.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.7...@ohif/extension-dicom-rt@0.3.0) (2020-08-10)
+
+
+### Features
+
+* 🎸 Add support for POINT and OPEN_PLANAR for RT ([0e87ab3](https://github.com/OHIF/Viewers/commit/0e87ab37c29fcf9af74bbcefca854c6e6b8707bc))
+
+
+
+
+
 ## [0.2.7](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-rt@0.2.6...@ohif/extension-dicom-rt@0.2.7) (2020-08-10)

 **Note:** Version bump only for package @ohif/extension-dicom-rt
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-dicom-rt",
-  "version": "0.2.7",
+  "version": "0.4.2",
  "description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
  "author": "OHIF",
  "license": "MIT",
@@ -30,8 +30,8 @@
  "peerDependencies": {
    "@ohif/core": "^0.50.0",
    "cornerstone-core": "^2.2.8",
-    "cornerstone-tools": "4.15.1",
-    "dcmjs": "0.16.0",
+    "cornerstone-tools": "^4.20.1",
+    "dcmjs": "0.16.3",
    "prop-types": "^15.6.2",
    "react": "^16.8.6",
    "react-dom": "^16.8.6"
@@ -27,6 +27,7 @@ const OHIFDicomRTStructSopClassHandler = {
    const {
      SeriesDate,
      SeriesTime,
+      SeriesNumber,
      SeriesDescription,
      FrameOfReferenceUID,
      SOPInstanceUID,
@@ -53,6 +54,7 @@ const OHIFDicomRTStructSopClassHandler = {
      isLoaded: false,
      SeriesDate,
      SeriesTime,
+      SeriesNumber,
      SeriesDescription,
    };

@@ -76,21 +76,15 @@ export default async function loadRTStruct(

    const isSupported = false;

-    for (let c = 0; c < ContourSequence.length; c++) {
+    const ContourSequenceArray = _toArray(ContourSequence);
+
+    for (let c = 0; c < ContourSequenceArray.length; c++) {
      const {
        ContourImageSequence,
        ContourData,
        NumberOfContourPoints,
        ContourGeometricType,
-      } = ContourSequence[c];
-
-      if (ContourGeometricType !== 'CLOSED_PLANAR') {
-        // TODO: Do we want to visualise types other than closed planar?
-        // We could easily do open planar and point.
-        continue;
-      }
-
-      isSupported = true;
+      } = ContourSequenceArray[c];

      const sopInstanceUID = ContourImageSequence.ReferencedSOPInstanceUID;
      const imageId = _getImageId(imageIdSopInstanceUidPairs, sopInstanceUID);
@@ -102,26 +96,38 @@ export default async function loadRTStruct(

      const imagePlane = cornerstone.metaData.get('imagePlaneModule', imageId);
      const points = [];
+      let measurementData;

-      for (let p = 0; p < NumberOfContourPoints * 3; p += 3) {
-        points.push({
-          x: ContourData[p],
-          y: ContourData[p + 1],
-          z: ContourData[p + 2],
-        });
+      switch (ContourGeometricType) {
+        case 'CLOSED_PLANAR':
+        case 'OPEN_PLANAR':
+        case 'POINT':
+          isSupported = true;
+
+          for (let p = 0; p < NumberOfContourPoints * 3; p += 3) {
+            points.push({
+              x: ContourData[p],
+              y: ContourData[p + 1],
+              z: ContourData[p + 2],
+            });
+          }
+
+          transformPointsToImagePlane(points, imagePlane);
+
+          measurementData = {
+            handles: {
+              points,
+            },
+            type: ContourGeometricType,
+            structureSetSeriesInstanceUid: rtStructDataset.SeriesInstanceUID,
+            ROINumber: ReferencedROINumber,
+          };
+
+          imageIdSpecificToolData.push(measurementData);
+          break;
+        default:
+          continue;
      }
-
-      transformPointsToImagePlane(points, imagePlane);
-
-      const measurementData = {
-        handles: {
-          points,
-        },
-        structureSetSeriesInstanceUid: rtStructDataset.SeriesInstanceUID,
-        ROINumber: ReferencedROINumber,
-      };
-
-      imageIdSpecificToolData.push(measurementData);
    }

    _setROIContourMetadata(
@@ -314,3 +320,7 @@ function _getImageIdSopInstanceUidPairsForDisplaySet(
    };
  });
 }
+
+function _toArray(objOrArray) {
+  return Array.isArray(objOrArray) ? objOrArray : [objOrArray];
+}
@@ -4,6 +4,7 @@ import TOOL_NAMES from '../utils/toolNames';

 // Cornerstone 3rd party dev kit imports
 const draw = importInternal('drawing/draw');
+const drawCircle = importInternal('drawing/drawCircle');
 const drawJoinedLines = importInternal('drawing/drawJoinedLines');
 const getNewContext = importInternal('drawing/getNewContext');
 const BaseTool = importInternal('base/BaseTool');
@@ -72,22 +73,52 @@ export default class RTStructDisplayTool extends BaseTool {
      const colorArray = ROIContourData.colorArray;
      const color = `rgba(${colorArray[0]},${colorArray[1]},${
        colorArray[2]
-        },${opacity})`;
+      },${opacity})`;

-      lineWidth;
-
-      draw(context, context => {
-        drawJoinedLines(
-          context,
-          eventData.element,
-          points[points.length - 1],
-          points,
-          {
+      switch (data.type) {
+        case 'CLOSED_PLANAR':
+          this._renderClosedPlanar(context, eventData.element, points, {
            color,
            lineWidth,
-          }
-        );
-      });
+          });
+          break;
+        case 'POINT':
+          this._renderPoint(context, eventData.element, points, {
+            color,
+            lineWidth,
+          });
+          break;
+        case 'OPEN_PLANAR':
+          this._renderOpenPlanar(context, eventData.element, points, {
+            color,
+            lineWidth,
+          });
+          break;
+      }
    }
  }
+
+  _renderClosedPlanar(context, element, points, options) {
+    draw(context, context => {
+      drawJoinedLines(
+        context,
+        element,
+        points[points.length - 1],
+        points,
+        options
+      );
+    });
+  }
+
+  _renderPoint(context, element, points, options) {
+    draw(context, context => {
+      drawCircle(context, element, points[0], 3, options);
+    });
+  }
+
+  _renderOpenPlanar(context, element, points, options) {
+    draw(context, context => {
+      drawJoinedLines(context, element, points[0], points, options);
+    });
+  }
 }
@@ -3,6 +3,33 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.4.1...@ohif/extension-dicom-segmentation@0.4.2) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.4.0...@ohif/extension-dicom-segmentation@0.4.1) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-dicom-segmentation
+
+
+
+
+
+# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.4...@ohif/extension-dicom-segmentation@0.4.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
 ## [0.3.4](https://github.com/OHIF/Viewers/compare/@ohif/extension-dicom-segmentation@0.3.3...@ohif/extension-dicom-segmentation@0.3.4) (2020-08-10)

 **Note:** Version bump only for package @ohif/extension-dicom-segmentation
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-dicom-segmentation",
-  "version": "0.3.4",
+  "version": "0.4.2",
  "description": "OHIF extension for viewing segmentations in the 2D MPR view",
  "author": "OHIF",
  "license": "MIT",
@@ -30,8 +30,8 @@
  "peerDependencies": {
    "@ohif/core": "^0.50.0",
    "cornerstone-core": "^2.2.8",
-    "cornerstone-tools": "4.15.1",
-    "dcmjs": "0.16.0",
+    "cornerstone-tools": "^4.20.1",
+    "dcmjs": "0.16.3",
    "prop-types": "^15.6.2",
    "react": "^16.8.6",
    "react-dom": "^16.8.6"
@@ -28,6 +28,7 @@ export default function getSopClassHandlerModule({ servicesManager }) {
      const {
        SeriesDate,
        SeriesTime,
+        SeriesNumber,
        SeriesDescription,
        FrameOfReferenceUID,
        SOPInstanceUID,
@@ -52,6 +53,7 @@ export default function getSopClassHandlerModule({ servicesManager }) {
        isLoaded: false,
        SeriesDate,
        SeriesTime,
+        SeriesNumber,
        SeriesDescription,
      };

@@ -1,4 +1,7 @@
 import setActiveLabelmap from './utils/setActiveLabelMap';
+import { classes } from '@ohif/core';
+
+const { ImageSet } = classes;

 export default function getSourceDisplaySet(studies, segDisplaySet) {
  const referencedDisplaySet = _getReferencedDisplaySet(segDisplaySet, studies);
@@ -19,15 +22,43 @@ const _getReferencedDisplaySet = (segDisplaySet, studies) => {
    ds => ds.displaySetInstanceUID !== segDisplaySet.displaySetInstanceUID
  );

-  const ReferencedSeriesSequence = Array.isArray(
-    segDisplaySet.metadata.ReferencedSeriesSequence
-  )
-    ? segDisplaySet.metadata.ReferencedSeriesSequence
-    : [segDisplaySet.metadata.ReferencedSeriesSequence];
+  const { metadata } = segDisplaySet;

-  const referencedSeriesInstanceUIDs = ReferencedSeriesSequence.map(
-    ReferencedSeries => ReferencedSeries.SeriesInstanceUID
-  );
+  let referencedSeriesInstanceUIDs;
+
+  if (metadata.ReferencedSeriesSequence) {
+    const ReferencedSeriesSequence = _toArray(
+      metadata.ReferencedSeriesSequence
+    );
+
+    referencedSeriesInstanceUIDs = ReferencedSeriesSequence.map(
+      ReferencedSeries => ReferencedSeries.SeriesInstanceUID
+    );
+  } else {
+    const { PerFrameFunctionalGroupsSequence } = metadata;
+
+    let SourceImageSequence;
+
+    if (metadata.SourceImageSequence) {
+      SourceImageSequence = metadata.SourceImageSequence;
+    } else {
+      const firstFunctionalGroups = _toArray(
+        PerFrameFunctionalGroupsSequence
+      )[0];
+      const { DerivationImageSequence } = firstFunctionalGroups;
+
+      SourceImageSequence = DerivationImageSequence;
+    }
+
+    const firstSourceImage = _toArray(SourceImageSequence)[0];
+
+    const { ReferencedSOPInstanceUID } = firstSourceImage;
+
+    referencedSeriesInstanceUIDs = _findReferencedSeriesInstanceUIDsFromSOPInstanceUID(
+      otherDisplaySets,
+      ReferencedSOPInstanceUID
+    );
+  }

  const referencedDisplaySet = otherDisplaySets.find(ds =>
    referencedSeriesInstanceUIDs.includes(ds.SeriesInstanceUID)
@@ -35,3 +66,23 @@ const _getReferencedDisplaySet = (segDisplaySet, studies) => {

  return referencedDisplaySet;
 };
+
+const _findReferencedSeriesInstanceUIDsFromSOPInstanceUID = (
+  displaySets,
+  SOPInstanceUID
+) => {
+  const imageSets = displaySets.filter(ds => ds instanceof ImageSet);
+
+  for (let i = 0; i < imageSets.length; i++) {
+    const { images } = imageSets[i];
+    for (let j = 0; j < images.length; j++) {
+      if (images[j].SOPInstanceUID === SOPInstanceUID) {
+        return [images[j].getData().metadata.SeriesInstanceUID];
+      }
+    }
+  }
+};
+
+function _toArray(arrayOrObject) {
+  return Array.isArray(arrayOrObject) ? arrayOrObject : [arrayOrObject];
+}
@@ -3,6 +3,44 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [1.7.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.2...@ohif/extension-vtk@1.7.3) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.7.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.1...@ohif/extension-vtk@1.7.2) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/extension-vtk
+
+
+
+
+
+## [1.7.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.7.0...@ohif/extension-vtk@1.7.1) (2020-08-24)
+
+
+### Bug Fixes
+
+* 🐛 Fail gracefully on an MPR load error ([#1992](https://github.com/OHIF/Viewers/issues/1992)) ([779a7e0](https://github.com/OHIF/Viewers/commit/779a7e0976aa3a2d2bf1dc8f056950f0545c9fff))
+
+
+
+
+
+# [1.7.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.10...@ohif/extension-vtk@1.7.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
 ## [1.6.10](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@1.6.9...@ohif/extension-vtk@1.6.10) (2020-08-10)

 **Note:** Version bump only for package @ohif/extension-vtk
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/extension-vtk",
-  "version": "1.6.10",
+  "version": "1.7.3",
  "description": "OHIF extension for VTK.js",
  "author": "OHIF",
  "license": "MIT",
@@ -33,9 +33,9 @@
    "@ohif/i18n": "^0.50.0",
    "@ohif/ui": "^0.50.0",
    "cornerstone-core": "^2.2.8",
-    "cornerstone-tools": "4.15.1",
+    "cornerstone-tools": "^4.20.1",
    "cornerstone-wado-image-loader": "^3.1.0",
-    "dcmjs": "0.16.0",
+    "dcmjs": "0.16.3",
    "dicom-parser": "^1.8.3",
    "i18next": "^17.0.3",
    "i18next-browser-languagedetector": "^3.0.1",
@@ -50,12 +50,12 @@
  "dependencies": {
    "@babel/runtime": "^7.5.5",
    "lodash.throttle": "^4.1.1",
-    "react-vtkjs-viewport": "^0.9.0"
+    "react-vtkjs-viewport": "^0.10.4"
  },
  "devDependencies": {
-    "@ohif/core": "^2.9.14",
+    "@ohif/core": "^2.10.2",
    "@ohif/ui": "^1.5.3",
-    "cornerstone-tools": "4.15.1",
+    "cornerstone-tools": "^4.20.1",
    "cornerstone-wado-image-loader": "^3.1.0",
    "dicom-parser": "^1.8.3",
    "gh-pages": "^2.0.1",
@@ -32,16 +32,16 @@ class LoadingIndicator extends PureComponent {
            </div>
          </div>
        ) : (
-            <div className="imageViewerLoadingIndicator loadingIndicator">
-              <div className="indicatorContents">
-                <p>
-                  {this.props.t('Loading...')}
-                  <i className="fa fa-spin fa-circle-o-notch fa-fw" />
-                  {percComplete}
-                </p>
-              </div>
+          <div className="imageViewerLoadingIndicator loadingIndicator">
+            <div className="indicatorContents">
+              <p>
+                {this.props.t('Loading...')}
+                <i className="fa fa-spin fa-circle-o-notch fa-fw" />
+                {percComplete}
+              </p>
            </div>
-          )}
+          </div>
+        )}
      </React.Fragment>
    );
  }
@@ -49,27 +49,30 @@ class OHIFVTKViewport extends Component {
  state = {
    volumes: null,
    paintFilterLabelMapImageData: null,
-    paintFilterBackgroundImageData: null
+    paintFilterBackgroundImageData: null,
+    percentComplete: 0,
+    isLoaded: false,
  };

  static propTypes = {
    viewportData: PropTypes.shape({
-      studies: PropTypes.array,
+      studies: PropTypes.array.isRequired,
      displaySet: PropTypes.shape({
-        StudyInstanceUID: PropTypes.string,
-        displaySetInstanceUID: PropTypes.string,
+        StudyInstanceUID: PropTypes.string.isRequired,
+        displaySetInstanceUID: PropTypes.string.isRequired,
        sopClassUIDs: PropTypes.arrayOf(PropTypes.string),
        SOPInstanceUID: PropTypes.string,
        frameIndex: PropTypes.number,
      }),
    }),
-    viewportIndex: PropTypes.number,
+    viewportIndex: PropTypes.number.isRequired,
    children: PropTypes.node,
    onScroll: PropTypes.func,
+    servicesManager: PropTypes.object.isRequired,
  };

  static defaultProps = {
-    onScroll: () => { },
+    onScroll: () => {},
  };

  static id = 'OHIFVTKViewport';
@@ -156,9 +159,11 @@ class OHIFVTKViewport extends Component {
      const { activeLabelmapIndex } = brushStackState;
      const labelmap3D = brushStackState.labelmaps3D[activeLabelmapIndex];

-      this.segmentsDefaultProperties = labelmap3D.segmentsHidden.map(isHidden => {
-        return { visible: !isHidden };
-      });
+      this.segmentsDefaultProperties = labelmap3D.segmentsHidden.map(
+        isHidden => {
+          return { visible: !isHidden };
+        }
+      );

      const vtkLabelmapID = `${firstImageId}_${activeLabelmapIndex}`;

@@ -349,7 +354,7 @@ class OHIFVTKViewport extends Component {

    if (
      displaySet.displaySetInstanceUID !==
-      prevDisplaySet.displaySetInstanceUID ||
+        prevDisplaySet.displaySetInstanceUID ||
      displaySet.SOPInstanceUID !== prevDisplaySet.SOPInstanceUID ||
      displaySet.frameIndex !== prevDisplaySet.frameIndex
    ) {
@@ -360,34 +365,54 @@ class OHIFVTKViewport extends Component {
  loadProgressively(imageDataObject) {
    loadImageData(imageDataObject);

-    const { isLoading, insertPixelDataPromises } = imageDataObject;
-
-    const NumberOfFrames = insertPixelDataPromises.length;
+    const { isLoading, imageIds } = imageDataObject;

    if (!isLoading) {
      this.setState({ isLoaded: true });
      return;
    }

-    insertPixelDataPromises.forEach(promise => {
-      promise.then(numberProcessed => {
-        const percentComplete = Math.floor(
-          (numberProcessed * 100) / NumberOfFrames
-        );
+    const NumberOfFrames = imageIds.length;

-        if (percentComplete !== this.state.percentComplete) {
-          this.setState({
-            percentComplete,
+    const onPixelDataInsertedCallback = numberProcessed => {
+      const percentComplete = Math.floor(
+        (numberProcessed * 100) / NumberOfFrames
+      );
+
+      if (percentComplete !== this.state.percentComplete) {
+        this.setState({
+          percentComplete,
+        });
+      }
+    };
+
+    const onPixelDataInsertedErrorCallback = error => {
+      const { UINotificationService } = this.props.servicesManager.services;
+
+      if (!this.hasError) {
+        if (this.props.viewportIndex === 0) {
+          // Only show the notification from one viewport 1 in MPR2D.
+          UINotificationService.show({
+            title: 'MPR Load Error',
+            message: error.message,
+            type: 'error',
+            autoClose: false,
          });
        }
-      });
-    });

-    Promise.all(insertPixelDataPromises).then(() => {
+        this.hasError = true;
+      }
+    };
+
+    const onAllPixelDataInsertedCallback = () => {
      this.setState({
        isLoaded: true,
      });
-    });
+    };
+
+    imageDataObject.onPixelDataInserted(onPixelDataInsertedCallback);
+    imageDataObject.onAllPixelDataInserted(onAllPixelDataInsertedCallback);
+    imageDataObject.onPixelDataInsertedError(onPixelDataInsertedErrorCallback);
  }

  render() {
@@ -435,7 +460,7 @@ class OHIFVTKViewport extends Component {
                segmentsDefaultProperties: this.segmentsDefaultProperties,
                onNewSegmentationRequested: () => {
                  this.setStateFromProps();
-                }
+                },
              }}
              onScroll={this.props.onScroll}
            />
@@ -16,8 +16,10 @@ const vtkExtension = {
   */
  id: 'vtk',

-  getViewportModule({ commandsManager }) {
-    const ExtendedVTKViewport = props => <OHIFVTKViewport {...props} />;
+  getViewportModule({ commandsManager, servicesManager }) {
+    const ExtendedVTKViewport = props => (
+      <OHIFVTKViewport {...props} servicesManager={servicesManager} />
+    );
    return withCommandsManager(ExtendedVTKViewport, commandsManager);
  },
  getToolbarModule() {
@@ -34,9 +34,8 @@
    "see-changed": "lerna changed",
    "docs:publish": "chmod +x ./build-and-publish-docs.sh && ./build-and-publish-docs.sh",
    "release": "yarn run lerna:version && yarn run lerna:publish",
-    "lerna:cache": "[ $NETLIFY_RESTORE = 1 ] && ./netlify-lerna-cache.sh || :",
-    "lerna:restore": "[ $NETLIFY_RESTORE = 1 ] && ./netlify-lerna-restore.sh || :",
-    "preinstall": "yarn lerna:restore",
+    "lerna:cache": "./netlify-lerna-cache.sh",
+    "lerna:restore": "./netlify-lerna-restore.sh",
    "lerna:version": "npx lerna version prerelease --force-publish",
    "lerna:publish": "lerna publish from-package --canary --dist-tag canary",
    "link-list": "npm ls --depth=0 --link=true"
@@ -3,6 +3,33 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [2.10.2](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.1...@ohif/core@2.10.2) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/core
+
+
+
+
+
+## [2.10.1](https://github.com/OHIF/Viewers/compare/@ohif/core@2.10.0...@ohif/core@2.10.1) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/core
+
+
+
+
+
+# [2.10.0](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.14...@ohif/core@2.10.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
 ## [2.9.14](https://github.com/OHIF/Viewers/compare/@ohif/core@2.9.13...@ohif/core@2.9.14) (2020-08-10)

 **Note:** Version bump only for package @ohif/core
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/core",
-  "version": "2.9.14",
+  "version": "2.10.2",
  "description": "Generic business logic for web-based medical imaging applications",
  "author": "OHIF Core Team",
  "license": "MIT",
@@ -32,14 +32,14 @@
  },
  "peerDependencies": {
    "cornerstone-core": "^2.2.8",
-    "cornerstone-tools": "4.15.1",
+    "cornerstone-tools": "^4.20.1",
    "cornerstone-wado-image-loader": "^3.1.0",
    "dicom-parser": "^1.8.3"
  },
  "dependencies": {
    "@babel/runtime": "^7.5.5",
    "ajv": "^6.10.0",
-    "dcmjs": "0.16.0",
+    "dcmjs": "0.16.3",
    "dicomweb-client": "^0.6.0",
    "immer": "6.0.2",
    "isomorphic-base64": "^1.0.2",
@@ -54,9 +54,6 @@ export class OHIFStudyMetadataSource extends StudyMetadataSource {
          // Get Study display sets
          const displaySets = studyMetadata.createDisplaySets();

-          // Set studyMetadata display sets
-          studyMetadata.setDisplaySets(displaySets);
-
          OHIFStudyMetadataSource._updateStudyCollections(studyMetadata);
          resolve(studyMetadata);
        })
@@ -10,8 +10,8 @@ import { api } from 'dicomweb-client';
 // - createStacks
 import { isImage } from '../../utils/isImage';
 import isDisplaySetReconstructable from '../../utils/isDisplaySetReconstructable';
-import isLowPriorityModality from '../../utils/isLowPriorityModality';
 import errorHandler from '../../errorHandler';
+import isLowPriorityModality from '../../utils/isLowPriorityModality';

 export class StudyMetadata extends Metadata {
  constructor(data, uid) {
@@ -308,14 +308,10 @@ export class StudyMetadata extends Metadata {
        series
      );

-      displaySets.push(...displaySetsForSeries);
+      displaySetsForSeries.forEach(ds => this._insertDisplaySet(ds));
    });

-    return sortDisplaySetList(displaySets);
-  }
-
-  sortDisplaySets() {
-    sortDisplaySetList(this._displaySets);
+    return this._displaySets;
  }

  /**
@@ -346,25 +342,9 @@ export class StudyMetadata extends Metadata {
      this.addDisplaySet(displaySet);
    });

-    this.sortDisplaySets();
-
    return true;
  }

-  /**
-   * Set display sets
-   * @param {Array} displaySets Array of display sets (ImageSet[])
-   */
-  setDisplaySets(displaySets) {
-    if (Array.isArray(displaySets) && displaySets.length > 0) {
-      // TODO: This is weird, can we just switch it to writable: true?
-      this._displaySets.splice(0);
-
-      displaySets.forEach(displaySet => this.addDisplaySet(displaySet));
-      this.sortDisplaySets();
-    }
-  }
-
  /**
   * Add a single display set to the list
   * @param {Object} displaySet Display set object
@@ -372,7 +352,7 @@ export class StudyMetadata extends Metadata {
   */
  addDisplaySet(displaySet) {
    if (displaySet instanceof ImageSet || displaySet.sopClassModule) {
-      this._displaySets.push(displaySet);
+      this._insertDisplaySet(displaySet);
      return true;
    }
    return false;
@@ -393,6 +373,96 @@ export class StudyMetadata extends Metadata {
    }
  }

+  /**
+   * Insert the displaySet so that the list has an increasing SeriesNumber,
+   * with the most recent series first for displaySets with the same SeriesNumber.
+   *
+   * If the displaySet is low priority, the same logic is applied, but is sorted within a sub list
+   * At the end of the list, where all low priority data is found.
+   */
+  _insertDisplaySet(displaySet) {
+    const { SeriesNumber } = displaySet;
+    const displaySets = this._displaySets;
+    let insertIndex = displaySets.length;
+    let firstIndexWithSameSeriesNumber;
+
+    // If low priority, start search from next low priority.
+    if (isLowPriorityModality(displaySet.Modality)) {
+      let startingIndex;
+
+      // Find where the first low priority displaySet is.
+      for (let i = 0; i < displaySets.length; i++) {
+        if (isLowPriorityModality(displaySets[i].Modality)) {
+          startingIndex = i;
+          break;
+        }
+      }
+
+      if (!startingIndex) {
+        startingIndex = displaySets.length;
+      }
+
+      // Find the correct SeriesNumber location to insert within the low priority
+      // Modality displaySets
+      for (let i = startingIndex; i < displaySets.length; i++) {
+        if (
+          displaySets[i].SeriesNumber === SeriesNumber &&
+          !firstIndexWithSameSeriesNumber
+        ) {
+          firstIndexWithSameSeriesNumber = i;
+        }
+
+        if (displaySets[i].SeriesNumber > SeriesNumber) {
+          insertIndex = i;
+          break;
+        }
+      }
+    } else {
+      // Find correct SeriesNumber to insert or where the low priority modalities start.
+      for (let i = 0; i < displaySets.length; i++) {
+        if (
+          displaySets[i].SeriesNumber === SeriesNumber &&
+          !firstIndexWithSameSeriesNumber
+        ) {
+          firstIndexWithSameSeriesNumber = i;
+        }
+
+        if (
+          displaySets[i].SeriesNumber > SeriesNumber ||
+          isLowPriorityModality(displaySets[i].Modality)
+        ) {
+          insertIndex = i;
+          break;
+        }
+      }
+    }
+
+    // If we have multiple displaySets with the same series number, find the insert position based on
+    // SeriesDate and SeriesTime.
+    if (firstIndexWithSameSeriesNumber !== undefined) {
+      // If no SeriesDate, is just a placeholder displaySet, just insert anywhere, it will be re-added later.
+      if (displaySet.SeriesDate) {
+        const seriesDateTime = `${displaySet.SeriesDate}${displaySet.SeriesTime}`;
+
+        for (let i = firstIndexWithSameSeriesNumber; i < insertIndex; i++) {
+          const displaySetI = displaySets[i];
+
+          if (
+            displaySetI.SeriesDate &&
+            `${displaySetI.SeriesDate}${displaySetI.SeriesTime}` <
+              seriesDateTime
+          ) {
+            insertIndex = i;
+            break;
+          }
+        }
+      }
+    }
+
+    this._displaySets.splice(insertIndex, 0, displaySet);
+    this.displaySets = this._displaySets;
+  }
+
  /**
   * Search the associated display sets using the supplied callback as criteria. The callback is passed
   * two arguments: display set (an ImageSet instance) and index (the integer
@@ -548,49 +618,6 @@ export class StudyMetadata extends Metadata {
    return this._series.indexOf(series);
  }

-  /**
-   * It sorts the series based on display sets order. Each series must be an instance
-   * of SeriesMetadata and each display sets must be an instance of ImageSet.
-   * Useful example of usage:
-   *     Study data provided by backend does not sort series at all and client-side
-   *     needs series sorted by the same criteria used for sorting display sets.
-   */
-  sortSeriesByDisplaySets() {
-    // Object for mapping display sets' index by SeriesInstanceUID
-    const displaySetsMapping = {};
-
-    // Loop through each display set to create the mapping
-    this.forEachDisplaySet((displaySet, index) => {
-      if (!(displaySet instanceof ImageSet)) {
-        throw new OHIFError(
-          `StudyMetadata::sortSeriesByDisplaySets display set at index ${index} is not an instance of ImageSet`
-        );
-      }
-
-      // In case of multiframe studies, just get the first index occurence
-      if (displaySetsMapping[displaySet.SeriesInstanceUID] === void 0) {
-        displaySetsMapping[displaySet.SeriesInstanceUID] = index;
-      }
-    });
-
-    // Clone of actual series
-    const actualSeries = this.getSeries();
-
-    actualSeries.forEach((series, index) => {
-      if (!(series instanceof SeriesMetadata)) {
-        throw new OHIFError(
-          `StudyMetadata::sortSeriesByDisplaySets series at index ${index} is not an instance of SeriesMetadata`
-        );
-      }
-
-      // Get the new series index
-      const seriesIndex = displaySetsMapping[series.getSeriesInstanceUID()];
-
-      // Update the series object with the new series position
-      this._series[seriesIndex] = series;
-    });
-  }
-
  /**
   * Compares the current study instance with another one.
   * @param {StudyMetadata} study An instance of the StudyMetadata class.
@@ -865,53 +892,3 @@ function _getDisplaySetFromSopClassModule(
  }
  return displaySet;
 }
-
-/**
- * Sort series primarily by Modality (i.e., series with references to other
- * series like SEG, KO or PR are grouped in the end of the list) and then by
- * series number:
- *
- *  --------
- * | CT #3  |
- * | CT #4  |
- * | CT #5  |
- *  --------
- * | SEG #1 |
- * | SEG #2 |
- *  --------
- *
- * @param {*} a - DisplaySet
- * @param {*} b - DisplaySet
- */
-
-function seriesSortingCriteria(a, b) {
-  const isLowPriorityA = isLowPriorityModality(a.Modality);
-  const isLowPriorityB = isLowPriorityModality(b.Modality);
-  if (!isLowPriorityA && isLowPriorityB) {
-    return -1;
-  }
-  if (isLowPriorityA && !isLowPriorityB) {
-    return 1;
-  }
-  return sortBySeriesNumber(a, b);
-}
-
-/**
- * Sort series by series number. Series with low
- * @param {*} a - DisplaySet
- * @param {*} b - DisplaySet
- */
-function sortBySeriesNumber(a, b) {
-  const seriesNumberAIsGreaterOrUndefined =
-    a.SeriesNumber > b.SeriesNumber || (!a.SeriesNumber && b.SeriesNumber);
-
-  return seriesNumberAIsGreaterOrUndefined ? 1 : -1;
-}
-
-/**
- * Sorts a list of display set objects
- * @param {Array} list A list of display sets to be sorted
- */
-function sortDisplaySetList(list) {
-  return list.sort(seriesSortingCriteria);
-}
@@ -1,4 +1,11 @@
-const LOW_PRIORITY_MODALITIES = Object.freeze(['SEG', 'KO', 'PR']);
+const LOW_PRIORITY_MODALITIES = Object.freeze([
+  'SEG',
+  'DOC',
+  'RTSTRUCT',
+  'SR',
+  'KO',
+  'PR',
+]);

 export default function isLowPriorityModality(Modality) {
  return LOW_PRIORITY_MODALITIES.includes(Modality);
@@ -3,6 +3,90 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

+## [4.5.4](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.3...@ohif/viewer@4.5.4) (2020-09-02)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.5.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.2...@ohif/viewer@4.5.3) (2020-08-28)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.5.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.1...@ohif/viewer@4.5.2) (2020-08-24)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+## [4.5.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.5.0...@ohif/viewer@4.5.1) (2020-08-20)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+# [4.5.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.4.1...@ohif/viewer@4.5.0) (2020-08-20)
+
+
+### Features
+
+* 🎸 Filter/promote multiple series instances ([#1533](https://github.com/OHIF/Viewers/issues/1533)) ([5fdace1](https://github.com/OHIF/Viewers/commit/5fdace1432b4b1bd31a60c5db6bd681610ec2b8e))
+
+
+
+
+
+## [4.4.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.4.0...@ohif/viewer@4.4.1) (2020-08-20)
+
+
+### Bug Fixes
+
+* Fix incorrect command name in Percy test ([#1999](https://github.com/OHIF/Viewers/issues/1999)) ([ebdcde1](https://github.com/OHIF/Viewers/commit/ebdcde1c4d9c95393cf79cc9994f5d60f6d66fdd))
+
+
+
+
+
+# [4.4.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.3.1...@ohif/viewer@4.4.0) (2020-08-18)
+
+
+### Features
+
+* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))
+
+
+
+
+
+## [4.3.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.3.0...@ohif/viewer@4.3.1) (2020-08-10)
+
+**Note:** Version bump only for package @ohif/viewer
+
+
+
+
+
+# [4.3.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.16...@ohif/viewer@4.3.0) (2020-08-10)
+
+
+### Features
+
+* 🎸 Optional disable measurements panel in app config ([#1912](https://github.com/OHIF/Viewers/issues/1912)) ([3d86b5f](https://github.com/OHIF/Viewers/commit/3d86b5f876d6481bcc57de88a0ba1f974f4ee263)), closes [#1864](https://github.com/OHIF/Viewers/issues/1864)
+
+
+
+
+
 ## [4.2.16](https://github.com/OHIF/Viewers/compare/@ohif/viewer@4.2.15...@ohif/viewer@4.2.16) (2020-08-10)

 **Note:** Version bump only for package @ohif/viewer
@@ -19,7 +19,7 @@ describe('Visual Regression - OHIF VTK Extension', () => {
    cy.get('[data-cy="2d mpr"]').click();

    //Wait waitVTKLoading Images
-    cy.waitVTKwaitVTKLoading();
+    cy.waitVTKLoading();
  });

  beforeEach(() => {
@@ -114,7 +114,7 @@ Cypress.Commands.add('waitVTKLoading', () => {
  });

  // Wait for finish loading
-  cy.get('[data-cy="viewprt-grid"]', { timeout: 30000 }).should($grid => {
+  cy.get('[data-cy="viewprt-grid"]', { timeout: 90000 }).should($grid => {
    expect($grid).not.to.contain.text('Loading');
  });
 });
@@ -1,6 +1,6 @@
 {
  "name": "@ohif/viewer",
-  "version": "4.2.16",
+  "version": "4.5.4",
  "description": "OHIF Viewer",
  "author": "OHIF Contributors",
  "license": "MIT",
@@ -48,16 +48,16 @@
  },
  "dependencies": {
    "@babel/runtime": "^7.5.5",
-    "@ohif/core": "^2.9.14",
-    "@ohif/extension-cornerstone": "^2.8.5",
-    "@ohif/extension-dicom-html": "^1.2.4",
-    "@ohif/extension-dicom-microscopy": "^0.51.0",
+    "@ohif/core": "^2.10.2",
+    "@ohif/extension-cornerstone": "^2.9.3",
+    "@ohif/extension-dicom-html": "^1.2.6",
+    "@ohif/extension-dicom-microscopy": "^0.51.1",
    "@ohif/extension-dicom-p10-downloader": "^0.1.2",
-    "@ohif/extension-dicom-pdf": "^1.0.3",
-    "@ohif/extension-dicom-rt": "^0.2.7",
-    "@ohif/extension-dicom-segmentation": "^0.3.4",
+    "@ohif/extension-dicom-pdf": "^1.0.4",
+    "@ohif/extension-dicom-rt": "^0.4.2",
+    "@ohif/extension-dicom-segmentation": "^0.4.2",
    "@ohif/extension-lesion-tracker": "^0.2.0",
-    "@ohif/extension-vtk": "^1.6.10",
+    "@ohif/extension-vtk": "^1.7.3",
    "@ohif/i18n": "^0.52.8",
    "@ohif/ui": "^1.5.3",
    "@tanem/react-nprogress": "^1.1.25",
@@ -65,9 +65,9 @@
    "core-js": "^3.2.1",
    "cornerstone-core": "^2.2.8",
    "cornerstone-math": "^0.1.8",
-    "cornerstone-tools": "4.15.1",
+    "cornerstone-tools": "^4.20.1",
    "cornerstone-wado-image-loader": "^3.1.0",
-    "dcmjs": "0.16.0",
+    "dcmjs": "0.16.3",
    "dicom-parser": "^1.8.3",
    "dicomweb-client": "^0.4.4",
    "hammerjs": "^2.0.8",
@@ -2,6 +2,7 @@ window.config = function(props) {
  var servicesManager = props.servicesManager;

  return {
+    disableMeasurementPanel: true,
    routerBasename: '/',
    enableGoogleCloudAdapter: true,
    enableGoogleCloudAdapterUI: false,
@@ -13,7 +13,7 @@ import {
  ModalProvider,
  DialogProvider,
  OHIFModal,
-  ErrorBoundary
+  ErrorBoundary,
 } from '@ohif/ui';

 import {
@@ -168,7 +168,7 @@ class App extends Component {

    if (this._userManager) {
      return (
-        <ErrorBoundary context='App'>
+        <ErrorBoundary context="App">
          <Provider store={store}>
            <AppProvider config={this._appConfig}>
              <I18nextProvider i18n={i18n}>
@@ -200,7 +200,7 @@ class App extends Component {
    }

    return (
-      <ErrorBoundary context='App'>
+      <ErrorBoundary context="App">
        <Provider store={store}>
          <AppProvider config={this._appConfig}>
            <I18nextProvider i18n={i18n}>
@@ -271,17 +271,21 @@ function _initExtensions(extensions, cornerstoneExtensionConfig, appConfig) {
    api: {
      contexts: CONTEXTS,
      hooks: {
-        useAppContext
-      }
-    }
+        useAppContext,
+      },
+    },
  });

  const requiredExtensions = [
    GenericViewerCommands,
    [OHIFCornerstoneExtension, cornerstoneExtensionConfig],
-    /* WARNING: MUST BE REGISTERED _AFTER_ OHIFCornerstoneExtension */
-    MeasurementsPanel,
  ];
+
+  if (appConfig.disableMeasurementPanel !== true) {
+    /* WARNING: MUST BE REGISTERED _AFTER_ OHIFCornerstoneExtension */
+    requiredExtensions.push(MeasurementsPanel);
+  }
+
  const mergedExtensions = requiredExtensions.concat(extensions);
  extensionManager.registerExtensions(mergedExtensions);
 }
@@ -19,6 +19,7 @@ import UserManagerContext from '../context/UserManagerContext';
 import AppContext from '../context/AppContext';

 import './Viewer.css';
+import { finished } from 'stream';

 class Viewer extends Component {
  static propTypes = {
@@ -189,6 +190,7 @@ class Viewer extends Component {
          currentTimepointId,
        ]);
      }
+
      this.setState({
        thumbnails: _mapStudiesToThumbnails(studies),
      });
@@ -197,6 +199,7 @@ class Viewer extends Component {

  componentDidUpdate(prevProps) {
    const { studies, isStudyLoaded } = this.props;
+
    if (studies !== prevProps.studies) {
      this.setState({
        thumbnails: _mapStudiesToThumbnails(studies),
@@ -355,7 +358,6 @@ export default withDialog(Viewer);
 * a mapping layer?
 *
 * TODO[react]:
- * - Add sorting of display sets
 * - Add showStackLoadingProgressBar option
 *
 * @param {Study[]} studies
@@ -369,9 +371,9 @@ const _mapStudiesToThumbnails = function(studies) {
      const {
        displaySetInstanceUID,
        SeriesDescription,
-        SeriesNumber,
        InstanceNumber,
        numImageFrames,
+        SeriesNumber,
      } = displaySet;

      let imageId;
@@ -395,9 +397,9 @@ const _mapStudiesToThumbnails = function(studies) {
        altImageText,
        displaySetInstanceUID,
        SeriesDescription,
-        SeriesNumber,
        InstanceNumber,
        numImageFrames,
+        SeriesNumber,
      };
    });

@@ -77,7 +77,6 @@ class ViewerLocalFileData extends Component {
      study.displaySets =
        study.displaySets ||
        studyMetadata.createDisplaySets(sopClassHandlerModules);
-      studyMetadata.setDisplaySets(study.displaySets);

      studyMetadata.forEachDisplaySet(displayset => {
        displayset.localFile = true;
@@ -14,23 +14,25 @@ const { OHIFStudyMetadata, OHIFSeriesMetadata } = metadata;
 const { retrieveStudiesMetadata, deleteStudyMetadataPromise } = studies;
 const { studyMetadataManager, makeCancelable } = utils;

-const _promoteToFront = (list, value, searchMethod) => {
-  let response = [...list];
-  let promoted = false;
-  const index = response.findIndex(searchMethod.bind(undefined, value));
+const _promoteToFront = (list, values, searchMethod) => {
+  let listCopy = [...list];
+  let response = [];
+  let promotedCount = 0;

-  if (index > 0) {
-    const first = response.splice(index, 1);
-    response = [...first, ...response];
-  }
+  const arrayValues = values.split(',');
+  arrayValues.forEach(value => {
+    const index = listCopy.findIndex(searchMethod.bind(undefined, value));

-  if (index >= 0) {
-    promoted = true;
-  }
+    if (index >= 0) {
+      const [itemToPromote] = listCopy.splice(index, 1);
+      response[promotedCount] = itemToPromote;
+      promotedCount++;
+    }
+  });

  return {
-    promoted,
-    data: response,
+    promoted: promotedCount === arrayValues.length,
+    data: [...response, ...listCopy],
  };
 };

@@ -45,7 +47,6 @@ const _promoteList = (study, studyMetadata, filters, isFilterStrategy) => {
  let promoted = false;
  // Promote only if no filter should be applied
  if (!isFilterStrategy) {
-    _sortStudyDisplaySet(study, studyMetadata);
    promoted = _promoteStudyDisplaySet(study, studyMetadata, filters);
  }

@@ -90,12 +91,48 @@ const _isQueryParamApplied = (study, filters = {}, isFilterStrategy) => {
  if (!seriesInstanceUID) {
    return applied;
  }
+  const seriesInstanceUIDs = seriesInstanceUID.split(',');
+
+  let validateFilterApplied = () => {
+    const sameSize = arrayToInspect.length === seriesInstanceUIDs.length;
+    if (!sameSize) {
+      return;
+    }
+
+    return arrayToInspect.every(item =>
+      seriesInstanceUIDs.some(
+        seriesInstanceUIDStr => seriesInstanceUIDStr === item.SeriesInstanceUID
+      )
+    );
+  };
+
+  let validatePromoteApplied = () => {
+    let isValid = true;
+    for (let index = 0; index < seriesInstanceUIDs.length; index++) {
+      const seriesInstanceUIDStr = seriesInstanceUIDs[index];
+      const resultSeries = arrayToInspect[index];
+
+      if (
+        !resultSeries ||
+        resultSeries.SeriesInstanceUID !== seriesInstanceUIDStr
+      ) {
+        isValid = false;
+        break;
+      }
+    }
+    return isValid;
+  };

  const { series = [], displaySets = [] } = study;
-  const firstSeries = isFilterStrategy ? series[0] : displaySets[0];
+  const arrayToInspect = isFilterStrategy ? series : displaySets;
+  const validateMethod = isFilterStrategy
+    ? validateFilterApplied
+    : validatePromoteApplied;

-  if (!firstSeries || firstSeries.SeriesInstanceUID !== seriesInstanceUID) {
+  if (!arrayToInspect) {
    applied = false;
+  } else {
+    applied = validateMethod();
  }

  return applied;
@@ -155,12 +192,6 @@ const _updateStudyDisplaySets = (study, studyMetadata) => {
  if (study.derivedDisplaySets) {
    studyMetadata._addDerivedDisplaySets(study.derivedDisplaySets);
  }
-
-  studyMetadata.setDisplaySets(study.displaySets);
-};
-
-const _sortStudyDisplaySet = (study, studyMetadata) => {
-  studyMetadata.sortDisplaySets(study.displaySets);
 };

 const _thinStudyData = study => {
@@ -221,7 +252,7 @@ function ViewerRetrieveStudyData({
    // Show message in case not promoted neither filtered but should to
    _showUserMessage(
      isQueryParamApplied,
-      'Query parameters were not applied. Using original series list for given study.',
+      'Query parameters were not totally applied. It might be using original series list for given study.',
      snackbarContext
    );

@@ -233,7 +264,7 @@ function ViewerRetrieveStudyData({
   * Method to process studies. It will update displaySet, studyMetadata, load remaining series, ...
   * @param {Array} studiesData Array of studies retrieved from server
   * @param {Object} [filters] - Object containing filters to be applied
-   * @param {string} [filter.seriesInstanceUID] - series instance uid to filter results against
+   * @param {string} [filters.seriesInstanceUID] - series instance uid to filter results against
   */
  const processStudies = (studiesData, filters) => {
    if (Array.isArray(studiesData) && studiesData.length > 0) {
@@ -299,7 +330,6 @@ function ViewerRetrieveStudyData({
      const filters = {};
      // Use the first, discard others
      const seriesInstanceUID = seriesInstanceUIDs && seriesInstanceUIDs[0];
-
      const retrieveParams = [server, studyInstanceUIDs];

      if (seriesInstanceUID) {
@@ -194,7 +194,6 @@ const _mapStudiesToNewFormat = studies => {
    study.displaySets =
      study.displaySets ||
      studyMetadata.createDisplaySets(sopClassHandlerModules);
-    studyMetadata.setDisplaySets(study.displaySets);

    studyMetadataManager.add(studyMetadata);
    uniqueStudyUIDs.add(study.StudyInstanceUID);
@@ -5950,10 +5950,10 @@ cornerstone-math@^0.1.8:
  resolved "https://registry.yarnpkg.com/cornerstone-math/-/cornerstone-math-0.1.8.tgz#68ab1f9e4fdcd7c5cb23a0d2eb4263f9f894f1c5"
  integrity sha512-x7NEQHBtVG7j1yeyj/aRoKTpXv1Vh2/H9zNLMyqYJDtJkNng8C4Q8M3CgZ1qer0Yr7eVq2x+Ynmj6kfOm5jXKw==

-cornerstone-tools@4.15.1:
-  version "4.15.1"
-  resolved "https://registry.yarnpkg.com/cornerstone-tools/-/cornerstone-tools-4.15.1.tgz#f0b1026da9c7758defc088bb2f1e78426a23d91e"
-  integrity sha512-fJuTUJW/NDSD520jPB++tX//Kq80jPDngChHZrhx2xjj/9dCnexD9kmTX30Z0WUq0a2JEHZ6FlcOX38kSmw1hQ==
+cornerstone-tools@^4.20.1:
+  version "4.20.1"
+  resolved "https://registry.yarnpkg.com/cornerstone-tools/-/cornerstone-tools-4.20.1.tgz#90f6c28356622eac037683b19f9175f85d33dff7"
+  integrity sha512-SyQsrg3bnGHUvWGZpUq7ia7/gj12S9zQFK2VMhpyAYxK9pWz+PRv8HBi0eEe/fWGAo/Vc62IRkdP3uF9MJlqiQ==
  dependencies:
    "@babel/runtime" "7.1.2"
    cornerstone-math "0.1.7"
@@ -6539,10 +6539,10 @@ dateformat@^3.0.0:
  resolved "https://registry.yarnpkg.com/dateformat/-/dateformat-3.0.3.tgz#a6e37499a4d9a9cf85ef5872044d62901c9889ae"
  integrity sha512-jyCETtSl3VMZMWeRo7iY1FL19ges1t55hMo5yaam4Jrsm5EPL89UQkoQRyiI+Yf4k8r2ZpdngkV8hr1lIdjb3Q==

-dcmjs@0.16.0:
-  version "0.16.0"
-  resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.16.0.tgz#714755d006c3a49cf65ef13e627ff7a23151d35a"
-  integrity sha512-41nY3Isg5i5FoSd1s67aUgUHi146r+fb8JuiRvDsxvm7MEkkdjIzMYMtxjsrVwKRW1xRH+x34nxbV9+8cc7WQw==
+dcmjs@0.16.3:
+  version "0.16.3"
+  resolved "https://registry.yarnpkg.com/dcmjs/-/dcmjs-0.16.3.tgz#ef44ccc4988a473fd40e1601122c57f2babded11"
+  integrity sha512-pMQGifMpMW9i9ufCdUoEPHrLWnm6ilnpfLqUc+PPoWr7OnuBhiRVRunbv39oTtFDZOLhQ2Ampm7UrkidWAbqiA==
  dependencies:
    "@babel/polyfill" "^7.8.3"
    "@babel/runtime" "^7.8.4"
@@ -15596,10 +15596,10 @@ react-codemirror2@^6.0.0:
  resolved "https://registry.yarnpkg.com/react-codemirror2/-/react-codemirror2-6.0.0.tgz#180065df57a64026026cde569a9708fdf7656525"
  integrity sha512-D7y9qZ05FbUh9blqECaJMdDwKluQiO3A9xB+fssd5jKM7YAXucRuEOlX32mJQumUvHUkHRHqXIPBjm6g0FW0Ag==

-react-cornerstone-viewport@4.0.1:
-  version "4.0.1"
-  resolved "https://registry.yarnpkg.com/react-cornerstone-viewport/-/react-cornerstone-viewport-4.0.1.tgz#6a7ec4c01b0626c4ad11552368f3dfa6cd67bdd5"
-  integrity sha512-47YhFsLS5vCWjiOKS9FwLxtA738HIHuNfdn3EJw6GyWD9jwL5HJQ/Ue1mKATjyHRvb3AyJTJuC/lGl0bsqKbYw==
+react-cornerstone-viewport@4.0.2:
+  version "4.0.2"
+  resolved "https://registry.yarnpkg.com/react-cornerstone-viewport/-/react-cornerstone-viewport-4.0.2.tgz#49bc8f8464164d8e779138dd9244d5c2524e0418"
+  integrity sha512-mF/piahoPG5U5TbxVMtc15bXrQZxcaPycbu4i4KD2rZkiWh1Zs24ryY1S+lFlDB/RcOAm0u+luEEt1tOg8F+UQ==
  dependencies:
    classnames "^2.2.6"
    date-fns "^2.2.1"
@@ -16047,10 +16047,10 @@ react-transition-group@^4.1.1:
    loose-envify "^1.4.0"
    prop-types "^15.6.2"

-react-vtkjs-viewport@^0.9.0:
-  version "0.9.0"
-  resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.9.0.tgz#5a7890643e511946f960db6b05142318be2dfe80"
-  integrity sha512-kjpNr1n+eW0nU736HH07IsSYQXphxfn/RBvKtpBer9tNsl+FyLH8h+uY8KWdv8kVBHkEoaH6/srxB0JBa8l+jA==
+react-vtkjs-viewport@^0.10.4:
+  version "0.10.4"
+  resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.10.4.tgz#eb038b0bf5c384bd3b45f2a0a57f52c682607fea"
+  integrity sha512-J1WxwHbjlttEWvdkM33DJx8QxHr3J7HR6wFSDVBDKY7McK2lwDAdRN8wSqy2BVNILlyurUUVwg2tK2txiJ+tuw==
  dependencies:
    date-fns "^2.2.1"
    gl-matrix "^3.1.0"
Author	SHA1	Message	Date
ohif-bot	6a37a2a661	chore(release): publish [skip ci] - @ohif/extension-cornerstone@2.9.3 - @ohif/extension-dicom-html@1.2.6 - @ohif/extension-dicom-rt@0.4.2 - @ohif/extension-dicom-segmentation@0.4.2 - @ohif/extension-vtk@1.7.3 - @ohif/core@2.10.2 - @ohif/viewer@4.5.4	2020-09-02 12:19:23 +00:00
James Petts	a8caf4bba4	[IDC-2017] Harden segmentation import to support more SEGs (#2024 ) * fix: 🐛 Upgrade dcmjs version to support more SEGs	2020-09-02 14:17:30 +02:00
ohif-bot	29dcc82e28	chore(release): publish [skip ci] - @ohif/extension-dicom-html@1.2.5 - @ohif/extension-dicom-microscopy@0.51.1 - @ohif/extension-dicom-pdf@1.0.4 - @ohif/extension-dicom-rt@0.4.1 - @ohif/extension-dicom-segmentation@0.4.1 - @ohif/extension-vtk@1.7.2 - @ohif/core@2.10.1 - @ohif/viewer@4.5.3	2020-08-28 15:52:27 +00:00
James Petts	dbf0501031	[IDC-1994] Sort series list by SeriesNumber, and sort by same SeriesNumber by date/time. (#2010 ) * Sort based on SeriesNumber and SeriesDate/SeriesTime. * Harden, and perform final sort in algorithm if last N entries have the same SeriesNumber. * Switch to insertion rather than sorting as sorting is too slow. Reimplement low priority sorting into new insertion method. * Fix local file viewing.	2020-08-28 17:51:08 +02:00
ohif-bot	ef28fa2ac1	chore(release): publish [skip ci] - @ohif/extension-vtk@1.7.1 - @ohif/viewer@4.5.2	2020-08-24 09:45:34 +00:00
James Petts	779a7e0976	fix: 🐛 Fail gracefully on an MPR load error (#1992 ) * feat: 🎸 Update react-vtkjs-viewport usage to use requestPool * Fix import of react-vtkjs-viewport to cornerstone-tools path. * Increase maximum load time of MPR test now we are throttling requests. * fix: 🐛 Fail gracefully on an MPR load error * Respond to reviewer comments.	2020-08-24 11:44:09 +02:00
ohif-bot	7f3ca1fc23	chore(release): publish [skip ci] - @ohif/extension-cornerstone@2.9.2 - @ohif/viewer@4.5.1	2020-08-20 14:50:30 +00:00
Alex BroaddusandDanny Brown	59ab68b4ed	fix: Updated react-cornerstone-viewport to version 4.0.2 (#2001 ) Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>	2020-08-20 10:48:16 -04:00
ohif-bot	248bc0a64a	chore(release): publish [skip ci] - @ohif/viewer@4.5.0	2020-08-20 13:13:52 +00:00
ladeirarodolfoandRodolfo Ladeira	5fdace1432	feat: 🎸 Filter/promote multiple series instances (#1533 ) improve filter/promote to be applied on multiple series instances ✅ Closes: 1532 Co-authored-by: Rodolfo Ladeira <rodolfo_radical@hotmail.com>	2020-08-20 15:12:00 +02:00
ohif-bot	71b6b454a3	chore(release): publish [skip ci] - @ohif/extension-cornerstone@2.9.1 - @ohif/viewer@4.4.1	2020-08-20 02:25:10 +00:00
Alex BroaddusandDanny Brown	3b02a06f5e	perf(stackPrefetch): Added stackPrefetch config with 20 max concurrent requests (#2000 ) Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>	2020-08-19 22:23:00 -04:00
Erik Ziegler	ebdcde1c4d	fix: Fix incorrect command name in Percy test (#1999 )	2020-08-19 15:42:25 -04:00
Erik Ziegler	829ac2b410	fix: Avoid lerna:restore unless we are on Netlify (closes #1926 , #1996 ) (#1997 )	2020-08-19 10:58:54 +02:00
Erik Ziegler	09745a0349	wip	2020-08-19 10:41:58 +02:00
Erik Ziegler	cd73dd3027	fix: Avoid lerna:restore unless we are on Netlify (closes #1926 , #1996 )	2020-08-19 10:01:47 +02:00
ohif-bot	ca511edeff	chore(release): publish [skip ci] - @ohif/extension-cornerstone@2.9.0 - @ohif/extension-dicom-rt@0.4.0 - @ohif/extension-dicom-segmentation@0.4.0 - @ohif/extension-vtk@1.7.0 - @ohif/core@2.10.0 - @ohif/viewer@4.4.0	2020-08-18 12:03:55 +00:00
James PettsandErik Ziegler	bb5f30ce2a	feat: 🎸 Update react-vtkjs-viewport usage to use requestPool (#1984 ) * feat: 🎸 Update react-vtkjs-viewport usage to use requestPool * Fix import of react-vtkjs-viewport to cornerstone-tools path. * Increase maximum load time of MPR test now we are throttling requests. * Remove debugger Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>	2020-08-18 14:01:44 +02:00
ohif-bot	87d5c68e71	chore(release): publish [skip ci] - @ohif/extension-dicom-rt@0.3.0 - @ohif/viewer@4.3.1	2020-08-10 12:18:19 +00:00
James Petts	0e87ab37c2	feat: 🎸 Add support for POINT and OPEN_PLANAR for RT * feat: 🎸 Add support for POINT and OPEN_PLANAR for RT	2020-08-10 14:16:19 +02:00
ohif-bot	756b005fe1	chore(release): publish [skip ci] - @ohif/viewer@4.3.0	2020-08-10 09:42:47 +00:00
James Petts	3d86b5f876	feat: 🎸 Optional disable measurements panel in app config (#1912 ) Can disable the measurements panel by adding disableMeasurementPanel: true to the appConfig. Closes: #1864	2020-08-10 11:40:11 +02:00