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31
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No files matched your search
@@ -175,7 +175,7 @@ jobs:
|
||||
- run:
|
||||
name: 'Build Demo Site'
|
||||
command: yarn run build:demo
|
||||
no_output_timeout: 30m
|
||||
no_output_timeout: 45m
|
||||
- run:
|
||||
name: 'Upload SourceMaps, Send Deploy Notification'
|
||||
command: |
|
||||
|
||||
+3
-1
@@ -8,11 +8,13 @@ coverage:
|
||||
status:
|
||||
project:
|
||||
default:
|
||||
threshold: 0.10%
|
||||
threshold: 0.5%
|
||||
core:
|
||||
flags: core
|
||||
threshold: 0.5%
|
||||
viewer:
|
||||
flags: viewer
|
||||
threshold: 0.5%
|
||||
patch: off
|
||||
flags:
|
||||
core:
|
||||
|
||||
@@ -132,7 +132,7 @@ deployment recipe.
|
||||
### Requirements
|
||||
|
||||
- [Yarn 1.17.3+](https://yarnpkg.com/en/docs/install)
|
||||
- [Node 8+](https://nodejs.org/en/)
|
||||
- [Node 10+](https://nodejs.org/en/)
|
||||
- Yarn Workspaces should be enabled on your machine:
|
||||
- `yarn config set workspaces-experimental true`
|
||||
|
||||
|
||||
@@ -3,6 +3,82 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.52.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.1...@ohif/extension-vtk@0.52.2) (2019-10-09)
|
||||
|
||||
|
||||
### Performance Improvements
|
||||
|
||||
* 🎸 Update vtk viewport for faster image reconstruction ([#1016](https://github.com/OHIF/Viewers/issues/1016)) ([8513ad9](https://github.com/OHIF/Viewers/commit/8513ad9))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.52.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.52.0...@ohif/extension-vtk@0.52.1) (2019-10-04)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.52.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.51.3...@ohif/extension-vtk@0.52.0) (2019-10-03)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 Synced Window Leveling ([559b637](https://github.com/OHIF/Viewers/commit/559b637)), closes [#558](https://github.com/OHIF/Viewers/issues/558)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.3](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.51.2...@ohif/extension-vtk@0.51.3) (2019-10-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.2](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.51.1...@ohif/extension-vtk@0.51.2) (2019-10-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.1](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.51.0...@ohif/extension-vtk@0.51.1) (2019-10-01)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* **rotate:** Use new MPR rotate in react-vtkjs-viewport 0.1.2 ([#964](https://github.com/OHIF/Viewers/issues/964)) ([8503cbc](https://github.com/OHIF/Viewers/commit/8503cbc))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.51.0](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.50.23...@ohif/extension-vtk@0.51.0) (2019-10-01)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 MPR UI improvements. Added MinIP, AvgIP, slab thickness slider and mode toggle ([#947](https://github.com/OHIF/Viewers/issues/947)) ([c79c0c3](https://github.com/OHIF/Viewers/commit/c79c0c3))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.50.23](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.50.22...@ohif/extension-vtk@0.50.23) (2019-10-01)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.50.22](https://github.com/OHIF/Viewers/compare/@ohif/extension-vtk@0.50.21...@ohif/extension-vtk@0.50.22) (2019-09-27)
|
||||
|
||||
**Note:** Version bump only for package @ohif/extension-vtk
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/extension-vtk",
|
||||
"version": "0.50.22",
|
||||
"version": "0.52.2",
|
||||
"description": "OHIF extension for VTK.js",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
@@ -48,11 +48,11 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"react-vtkjs-viewport": "0.1.0"
|
||||
"react-vtkjs-viewport": "0.1.4"
|
||||
},
|
||||
"devDependencies": {
|
||||
"@ohif/core": "^1.0.1",
|
||||
"@ohif/ui": "^0.51.2",
|
||||
"@ohif/core": "^1.2.0",
|
||||
"@ohif/ui": "^0.53.1",
|
||||
"cornerstone-tools": "^4.0.9",
|
||||
"cornerstone-wado-image-loader": "^3.0.0",
|
||||
"dcmjs": "^0.6.1",
|
||||
|
||||
@@ -1,16 +1,17 @@
|
||||
import React, { Component } from "react";
|
||||
import { getImageData, loadImageData } from "react-vtkjs-viewport";
|
||||
import React, { Component } from 'react';
|
||||
import { getImageData, loadImageData } from 'react-vtkjs-viewport';
|
||||
|
||||
import ConnectedVTKViewport from "./ConnectedVTKViewport";
|
||||
import LoadingIndicator from "./LoadingIndicator.js";
|
||||
import OHIF from "@ohif/core";
|
||||
import PropTypes from "prop-types";
|
||||
import cornerstone from "cornerstone-core";
|
||||
import handleSegmentationStorage from "./handleSegmentationStorage.js";
|
||||
import vtkDataArray from "vtk.js/Sources/Common/Core/DataArray";
|
||||
import vtkImageData from "vtk.js/Sources/Common/DataModel/ImageData";
|
||||
import vtkVolume from "vtk.js/Sources/Rendering/Core/Volume";
|
||||
import vtkVolumeMapper from "vtk.js/Sources/Rendering/Core/VolumeMapper";
|
||||
import ConnectedVTKViewport from './ConnectedVTKViewport';
|
||||
import LoadingIndicator from './LoadingIndicator.js';
|
||||
import OHIF from '@ohif/core';
|
||||
import PropTypes from 'prop-types';
|
||||
import cornerstone from 'cornerstone-core';
|
||||
import handleSegmentationStorage from './handleSegmentationStorage.js';
|
||||
import vtkDataArray from 'vtk.js/Sources/Common/Core/DataArray';
|
||||
import vtkImageData from 'vtk.js/Sources/Common/DataModel/ImageData';
|
||||
import vtkVolume from 'vtk.js/Sources/Rendering/Core/Volume';
|
||||
import vtkVolumeMapper from 'vtk.js/Sources/Rendering/Core/VolumeMapper';
|
||||
import vtkViewportSubscriptionManager from './utils/vtkViewportSubscriptionManager.js';
|
||||
|
||||
const { StackManager } = OHIF.utils;
|
||||
|
||||
@@ -24,7 +25,7 @@ cornerstone.metaData.addProvider(
|
||||
StackManager.setMetadataProvider(metadataProvider);
|
||||
|
||||
const SOP_CLASSES = {
|
||||
SEGMENTATION_STORAGE: "1.2.840.10008.5.1.4.1.1.66.4"
|
||||
SEGMENTATION_STORAGE: '1.2.840.10008.5.1.4.1.1.66.4',
|
||||
};
|
||||
|
||||
const specialCaseHandlers = {};
|
||||
@@ -42,7 +43,7 @@ const volumeCache = {};
|
||||
*/
|
||||
function createLabelMapImageData(backgroundImageData) {
|
||||
const labelMapData = vtkImageData.newInstance(
|
||||
backgroundImageData.get("spacing", "origin", "direction")
|
||||
backgroundImageData.get('spacing', 'origin', 'direction')
|
||||
);
|
||||
labelMapData.setDimensions(backgroundImageData.getDimensions());
|
||||
labelMapData.computeTransforms();
|
||||
@@ -50,7 +51,7 @@ function createLabelMapImageData(backgroundImageData) {
|
||||
const values = new Uint8Array(backgroundImageData.getNumberOfPoints());
|
||||
const dataArray = vtkDataArray.newInstance({
|
||||
numberOfComponents: 1, // labelmap with single component
|
||||
values
|
||||
values,
|
||||
});
|
||||
labelMapData.getPointData().setScalars(dataArray);
|
||||
|
||||
@@ -61,24 +62,24 @@ class OHIFVTKViewport extends Component {
|
||||
state = {
|
||||
volumes: null,
|
||||
paintFilterLabelMapImageData: null,
|
||||
paintFilterBackgroundImageData: null
|
||||
paintFilterBackgroundImageData: null,
|
||||
};
|
||||
|
||||
static propTypes = {
|
||||
studies: PropTypes.object,
|
||||
displaySet: PropTypes.object,
|
||||
viewportIndex: PropTypes.number,
|
||||
children: PropTypes.node
|
||||
children: PropTypes.node,
|
||||
};
|
||||
|
||||
static id = "OHIFVTKViewport";
|
||||
static id = 'OHIFVTKViewport';
|
||||
|
||||
static init() {
|
||||
console.log("OHIFVTKViewport init()");
|
||||
console.log('OHIFVTKViewport init()');
|
||||
}
|
||||
|
||||
static destroy() {
|
||||
console.log("OHIFVTKViewport destroy()");
|
||||
console.log('OHIFVTKViewport destroy()');
|
||||
StackManager.clearStacks();
|
||||
}
|
||||
|
||||
@@ -109,7 +110,7 @@ class OHIFVTKViewport extends Component {
|
||||
} else if (sopInstanceUid) {
|
||||
const index = stack.imageIds.findIndex(imageId => {
|
||||
const sopCommonModule = cornerstone.metaData.get(
|
||||
"sopCommonModule",
|
||||
'sopCommonModule',
|
||||
imageId
|
||||
);
|
||||
if (!sopCommonModule) {
|
||||
@@ -151,7 +152,7 @@ class OHIFVTKViewport extends Component {
|
||||
|
||||
switch (sopClassUid) {
|
||||
case SOP_CLASSES.SEGMENTATION_STORAGE:
|
||||
throw new Error("Not yet implemented");
|
||||
throw new Error('Not yet implemented');
|
||||
|
||||
const data = handleSegmentationStorage(
|
||||
stack.imageIds,
|
||||
@@ -164,7 +165,7 @@ class OHIFVTKViewport extends Component {
|
||||
return loadImageData(imageDataObject).then(() => {
|
||||
return {
|
||||
data: imageDataObject.vtkImageData,
|
||||
labelmap: labelmapDataObject
|
||||
labelmap: labelmapDataObject,
|
||||
};
|
||||
});
|
||||
default:
|
||||
@@ -172,7 +173,7 @@ class OHIFVTKViewport extends Component {
|
||||
|
||||
return loadImageData(imageDataObject).then(() => {
|
||||
return {
|
||||
data: imageDataObject.vtkImageData
|
||||
data: imageDataObject.vtkImageData,
|
||||
};
|
||||
});
|
||||
}
|
||||
@@ -189,10 +190,16 @@ class OHIFVTKViewport extends Component {
|
||||
volumeActor.setMapper(volumeMapper);
|
||||
volumeMapper.setInputData(data);
|
||||
|
||||
const range = data.getPointData().getScalars().getRange();
|
||||
const range = data
|
||||
.getPointData()
|
||||
.getScalars()
|
||||
.getRange();
|
||||
|
||||
// TODO: For PET we might want to just set this to 0-5 SUV
|
||||
volumeActor.getProperty().getRGBTransferFunction(0).setRange(range[0], range[1]);
|
||||
volumeActor
|
||||
.getProperty()
|
||||
.getRGBTransferFunction(0)
|
||||
.setRange(range[0], range[1]);
|
||||
|
||||
// TODO: Should look into implementing autoAdjustSampleDistance in vtk
|
||||
const sampleDistance =
|
||||
@@ -200,7 +207,7 @@ class OHIFVTKViewport extends Component {
|
||||
Math.sqrt(
|
||||
data
|
||||
.getSpacing()
|
||||
.map((v) => v * v)
|
||||
.map(v => v * v)
|
||||
.reduce((a, b) => a + b, 0)
|
||||
);
|
||||
|
||||
@@ -218,12 +225,12 @@ class OHIFVTKViewport extends Component {
|
||||
displaySetInstanceUid,
|
||||
sopClassUids,
|
||||
sopInstanceUid,
|
||||
frameIndex
|
||||
frameIndex,
|
||||
} = displaySet;
|
||||
|
||||
if (sopClassUids.length > 1) {
|
||||
console.warn(
|
||||
"More than one SOPClassUid in the same series is not yet supported."
|
||||
'More than one SOPClassUid in the same series is not yet supported.'
|
||||
);
|
||||
}
|
||||
|
||||
@@ -249,7 +256,7 @@ class OHIFVTKViewport extends Component {
|
||||
this.setState({
|
||||
volumes: [volumeActor],
|
||||
paintFilterBackgroundImageData: data,
|
||||
paintFilterLabelMapImageData: labelmap
|
||||
paintFilterLabelMapImageData: labelmap,
|
||||
});
|
||||
}
|
||||
|
||||
@@ -257,6 +264,11 @@ class OHIFVTKViewport extends Component {
|
||||
this.setStateFromProps();
|
||||
}
|
||||
|
||||
componentWillUnmount() {
|
||||
console.log(this.props.viewportIndex);
|
||||
vtkViewportSubscriptionManager.unsubscribe(this.props.viewportIndex);
|
||||
}
|
||||
|
||||
componentDidUpdate(prevProps) {
|
||||
const { studies, displaySet } = this.props.viewportData;
|
||||
const prevDisplaySet = prevProps.viewportData.displaySet;
|
||||
@@ -279,12 +291,12 @@ class OHIFVTKViewport extends Component {
|
||||
childrenWithProps = this.props.children.map((child, index) => {
|
||||
return React.cloneElement(child, {
|
||||
viewportIndex: this.props.viewportIndex,
|
||||
key: index
|
||||
key: index,
|
||||
});
|
||||
});
|
||||
}
|
||||
|
||||
const style = { width: "100%", height: "100%", position: "relative" };
|
||||
const style = { width: '100%', height: '100%', position: 'relative' };
|
||||
|
||||
return (
|
||||
<>
|
||||
|
||||
@@ -2,12 +2,14 @@ import {
|
||||
vtkInteractorStyleMPRCrosshairs,
|
||||
vtkInteractorStyleMPRWindowLevel,
|
||||
vtkInteractorStyleMPRSlice,
|
||||
vtkInteractorStyleMPRRotate,
|
||||
vtkSVGCrosshairsWidget,
|
||||
vtkSVGWidgetManager,
|
||||
} from 'react-vtkjs-viewport';
|
||||
|
||||
import setMPRLayout from './utils/setMPRLayout.js';
|
||||
import setViewportToVTK from './utils/setViewportToVTK.js';
|
||||
import vtkViewportSubscriptionManager from './utils/vtkViewportSubscriptionManager.js';
|
||||
import vtkCoordinate from 'vtk.js/Sources/Rendering/Core/Coordinate';
|
||||
import vtkMath from 'vtk.js/Sources/Common/Core/Math';
|
||||
import vtkMatrixBuilder from 'vtk.js/Sources/Common/Core/MatrixBuilder';
|
||||
@@ -18,6 +20,7 @@ const { BlendMode } = Constants;
|
||||
// TODO: Put this somewhere else
|
||||
let apis = {};
|
||||
let currentSlabThickness = 0.1;
|
||||
let defaultSlabThickness = 0.1;
|
||||
|
||||
function getCrosshairCallbackForIndex(index) {
|
||||
return ({ worldPos }) => {
|
||||
@@ -98,7 +101,7 @@ function _setView(api, sliceNormal, viewUp) {
|
||||
const camera = renderer.getActiveCamera();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
istyle.setSliceNormal(...sliceNormal);
|
||||
camera.setViewUp(...viewUp);
|
||||
istyle.setViewUp(...viewUp);
|
||||
|
||||
renderWindow.render();
|
||||
}
|
||||
@@ -109,14 +112,15 @@ function switchMPRInteractors(api, istyle) {
|
||||
const camera = renderer.getActiveCamera();
|
||||
const currentIStyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
let currentNormal;
|
||||
if (currentIStyle.getSliceNormal && istyle.getSliceNormal) {
|
||||
currentNormal = currentIStyle.getSliceNormal();
|
||||
let currentViewport;
|
||||
if (currentIStyle.getViewport && istyle.getViewport) {
|
||||
currentViewport = currentIStyle.getViewport();
|
||||
}
|
||||
|
||||
let currentSlabThickness;
|
||||
if (currentIStyle.getSlabThickness && istyle.getSlabThickness) {
|
||||
currentSlabThickness = currentIStyle.getSlabThickness();
|
||||
defaultSlabThickness = currentSlabThickness;
|
||||
}
|
||||
|
||||
renderWindow.getInteractor().setInteractorStyle(istyle);
|
||||
@@ -124,11 +128,11 @@ function switchMPRInteractors(api, istyle) {
|
||||
// TODO: Not sure why this is required the second time this function is called
|
||||
istyle.setInteractor(renderWindow.getInteractor());
|
||||
|
||||
if (istyle.getVolumeMapper() !== api.volumes[0]) {
|
||||
if (currentNormal) {
|
||||
istyle.setSliceNormal(currentNormal);
|
||||
}
|
||||
if (currentViewport) {
|
||||
istyle.setViewport(currentViewport);
|
||||
}
|
||||
|
||||
if (istyle.getVolumeMapper() !== api.volumes[0]) {
|
||||
if (currentSlabThickness) {
|
||||
istyle.setSlabThickness(currentSlabThickness);
|
||||
}
|
||||
@@ -161,7 +165,7 @@ const actions = {
|
||||
},
|
||||
enableRotateTool: () => {
|
||||
apis.forEach(api => {
|
||||
const istyle = vtkInteractorStyleMPRSlice.newInstance();
|
||||
const istyle = vtkInteractorStyleMPRRotate.newInstance();
|
||||
|
||||
switchMPRInteractors(api, istyle);
|
||||
});
|
||||
@@ -182,7 +186,7 @@ const actions = {
|
||||
switchMPRInteractors(api, istyle);
|
||||
});
|
||||
},
|
||||
setSlabThickness: slabThickness => {
|
||||
setSlabThickness: ({ slabThickness }) => {
|
||||
currentSlabThickness = slabThickness;
|
||||
|
||||
apis.forEach(api => {
|
||||
@@ -191,15 +195,6 @@ const actions = {
|
||||
|
||||
if (istyle.setSlabThickness) {
|
||||
istyle.setSlabThickness(currentSlabThickness);
|
||||
|
||||
// TODO: Do this inside the interactors in a setSlabThickness function instead
|
||||
const renderer = api.genericRenderWindow.getRenderer();
|
||||
const camera = renderer.getActiveCamera();
|
||||
const dist = camera.getDistance();
|
||||
const near = dist - currentSlabThickness / 2;
|
||||
const far = dist + currentSlabThickness / 2;
|
||||
|
||||
camera.setClippingRange(near, far);
|
||||
}
|
||||
|
||||
renderWindow.render();
|
||||
@@ -220,6 +215,32 @@ const actions = {
|
||||
renderWindow.render();
|
||||
});
|
||||
},
|
||||
setBlendModeToComposite: () => {
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const istyle = renderWindow.getInteractor().getInteractorStyle();
|
||||
|
||||
const mapper = api.volumes[0].getMapper();
|
||||
if (mapper.setBlendModeToComposite) {
|
||||
mapper.setBlendModeToComposite();
|
||||
}
|
||||
|
||||
if (istyle.setSlabThickness) {
|
||||
istyle.setSlabThickness(defaultSlabThickness);
|
||||
}
|
||||
renderWindow.render();
|
||||
});
|
||||
},
|
||||
setBlendModeToMaximumIntensity: () => {
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
const mapper = api.volumes[0].getMapper();
|
||||
if (mapper.setBlendModeToMaximumIntensity) {
|
||||
mapper.setBlendModeToMaximumIntensity();
|
||||
}
|
||||
renderWindow.render();
|
||||
});
|
||||
},
|
||||
setBlendMode: ({ blendMode }) => {
|
||||
apis.forEach(api => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
@@ -243,16 +264,19 @@ const actions = {
|
||||
|
||||
apis = apiByViewport;
|
||||
|
||||
/*const rgbTransferFunction = apiByViewport[0].volumes[0]
|
||||
const rgbTransferFunction = apiByViewport[0].volumes[0]
|
||||
.getProperty()
|
||||
.getRGBTransferFunction(0);
|
||||
rgbTransferFunction.onModified(() => {
|
||||
|
||||
const onModifiedSubscription = rgbTransferFunction.onModified(() => {
|
||||
apiByViewport.forEach(a => {
|
||||
const renderWindow = a.genericRenderWindow.getRenderWindow();
|
||||
|
||||
renderWindow.render();
|
||||
});
|
||||
});*/
|
||||
});
|
||||
|
||||
vtkViewportSubscriptionManager.pushSubscription(0, onModifiedSubscription);
|
||||
|
||||
apiByViewport.forEach((api, index) => {
|
||||
const renderWindow = api.genericRenderWindow.getRenderWindow();
|
||||
@@ -284,18 +308,18 @@ const actions = {
|
||||
case 0:
|
||||
//Axial
|
||||
istyle.setSliceNormal(0, 0, 1);
|
||||
camera.setViewUp(0, -1, 0);
|
||||
istyle.setViewUp(0, -1, 0);
|
||||
|
||||
break;
|
||||
case 1:
|
||||
// sagittal
|
||||
istyle.setSliceNormal(1, 0, 0);
|
||||
camera.setViewUp(0, 0, 1);
|
||||
istyle.setViewUp(0, 0, 1);
|
||||
break;
|
||||
case 2:
|
||||
// Coronal
|
||||
istyle.setSliceNormal(0, 1, 0);
|
||||
camera.setViewUp(0, 0, 1);
|
||||
istyle.setViewUp(0, 0, 1);
|
||||
break;
|
||||
}
|
||||
|
||||
@@ -338,12 +362,12 @@ const definitions = {
|
||||
options: {},
|
||||
},
|
||||
setBlendModeToComposite: {
|
||||
commandFn: actions.setBlendMode,
|
||||
commandFn: actions.setBlendModeToComposite,
|
||||
storeContexts: [],
|
||||
options: { blendMode: BlendMode.COMPOSITE_BLEND },
|
||||
},
|
||||
setBlendModeToMaximumIntensity: {
|
||||
commandFn: actions.setBlendMode,
|
||||
commandFn: actions.setBlendModeToMaximumIntensity,
|
||||
storeContexts: [],
|
||||
options: { blendMode: BlendMode.MAXIMUM_INTENSITY_BLEND },
|
||||
},
|
||||
|
||||
@@ -0,0 +1,207 @@
|
||||
import React, { useState, useEffect } from 'react';
|
||||
import PropTypes from 'prop-types';
|
||||
import classnames from 'classnames';
|
||||
import { Range, Checkbox, Select } from '@ohif/ui';
|
||||
|
||||
import './slab-thickness-toolbar-button.styl';
|
||||
|
||||
const SLIDER = {
|
||||
MIN: 0.1,
|
||||
MAX: 1000,
|
||||
STEP: 0.1,
|
||||
};
|
||||
|
||||
const ToolbarLabel = props => {
|
||||
const { label } = props;
|
||||
return <div className="toolbar-button-label">{label}</div>;
|
||||
};
|
||||
|
||||
const ToolbarSlider = props => {
|
||||
const { value, min, max, onChange } = props;
|
||||
return (
|
||||
<div className="toolbar-slider-container">
|
||||
<label htmlFor="toolbar-slider">{value}mm</label>
|
||||
<Range
|
||||
value={value}
|
||||
min={min}
|
||||
max={max}
|
||||
step={SLIDER.STEP}
|
||||
onChange={onChange}
|
||||
id="toolbar-slider"
|
||||
/>
|
||||
</div>
|
||||
);
|
||||
};
|
||||
|
||||
const _getSelectOptions = button => {
|
||||
return button.operationButtons.map(button => {
|
||||
return {
|
||||
key: button.label,
|
||||
value: button.id,
|
||||
};
|
||||
});
|
||||
};
|
||||
|
||||
const _getClassNames = (isActive, className) => {
|
||||
return classnames('toolbar-button', 'slab-thickness', className, {
|
||||
active: isActive,
|
||||
});
|
||||
};
|
||||
|
||||
const _applySlabThickness = (
|
||||
value,
|
||||
modeChecked,
|
||||
toolbarClickCallback,
|
||||
button
|
||||
) => {
|
||||
if (!modeChecked || !toolbarClickCallback) {
|
||||
return;
|
||||
}
|
||||
|
||||
const { actionButton } = button;
|
||||
|
||||
const generateOperation = (operation, value) => {
|
||||
// Combine slider value into slider operation
|
||||
const generatedOperation = { ...operation };
|
||||
generatedOperation.commandOptions = {
|
||||
...operation.commandOptions,
|
||||
slabThickness: value,
|
||||
};
|
||||
|
||||
return generatedOperation;
|
||||
};
|
||||
|
||||
const operation = generateOperation(actionButton, value);
|
||||
toolbarClickCallback(operation, event);
|
||||
};
|
||||
|
||||
const _applyModeOperation = (
|
||||
operation,
|
||||
modeChecked,
|
||||
toolbarClickCallback,
|
||||
button
|
||||
) => {
|
||||
// in case modeChecked has not being triggered by user yet
|
||||
if (typeof modeChecked !== 'boolean') {
|
||||
return;
|
||||
}
|
||||
|
||||
const { deactivateButton } = button;
|
||||
|
||||
const _operation = modeChecked ? operation : deactivateButton;
|
||||
if (toolbarClickCallback && _operation) {
|
||||
toolbarClickCallback(_operation);
|
||||
}
|
||||
};
|
||||
|
||||
const _getInitialState = currentSelectedOption => {
|
||||
return {
|
||||
value: SLIDER.MIN,
|
||||
sliderMin: SLIDER.MIN,
|
||||
sliderMax: SLIDER.MAX,
|
||||
modeChecked: undefined,
|
||||
operation: currentSelectedOption,
|
||||
};
|
||||
};
|
||||
|
||||
const INITIAL_OPTION_INDEX = 0;
|
||||
const _getInitialtSelectedOption = (button = {}) => {
|
||||
return (
|
||||
button.operationButtons && button.operationButtons[INITIAL_OPTION_INDEX]
|
||||
);
|
||||
};
|
||||
|
||||
function SlabThicknessToolbarComponent({
|
||||
parentContext,
|
||||
toolbarClickCallback,
|
||||
button,
|
||||
activeButtons,
|
||||
isActive,
|
||||
className,
|
||||
}) {
|
||||
const currentSelectedOption = _getInitialtSelectedOption(button);
|
||||
const [state, setState] = useState(_getInitialState(currentSelectedOption));
|
||||
const { label, operationButtons } = button;
|
||||
const _className = _getClassNames(isActive, className);
|
||||
const selectOptions = _getSelectOptions(button);
|
||||
function onChangeSelect(selectedValue) {
|
||||
// find select value
|
||||
const operation = operationButtons.find(
|
||||
button => button.id === selectedValue
|
||||
);
|
||||
|
||||
if (operation === state.operation) {
|
||||
return;
|
||||
}
|
||||
|
||||
setState({ ...state, operation });
|
||||
}
|
||||
|
||||
function onChangeCheckbox(checked) {
|
||||
setState({ ...state, modeChecked: checked });
|
||||
}
|
||||
|
||||
function onChangeSlider(event) {
|
||||
const value = Number(event.target.value);
|
||||
|
||||
if (value !== state.value) {
|
||||
setState({ ...state, value, modeChecked: true });
|
||||
}
|
||||
}
|
||||
|
||||
useEffect(() => {
|
||||
_applyModeOperation(
|
||||
state.operation,
|
||||
state.modeChecked,
|
||||
toolbarClickCallback,
|
||||
button
|
||||
);
|
||||
}, [state.modeChecked, state.operation]);
|
||||
|
||||
useEffect(() => {
|
||||
_applySlabThickness(
|
||||
state.value,
|
||||
state.modeChecked,
|
||||
toolbarClickCallback,
|
||||
button
|
||||
);
|
||||
}, [state.operation, state.modeChecked, state.value]);
|
||||
|
||||
return (
|
||||
<div className={_className}>
|
||||
<div className="container">
|
||||
<ToolbarSlider
|
||||
value={state.value}
|
||||
min={state.sliderMin}
|
||||
max={state.sliderMax}
|
||||
onChange={onChangeSlider}
|
||||
/>
|
||||
<ToolbarLabel key="toolbar-label" label={label} />
|
||||
</div>
|
||||
<div className="controller">
|
||||
<Checkbox
|
||||
label="mode"
|
||||
checked={state.modeChecked}
|
||||
onChange={onChangeCheckbox}
|
||||
></Checkbox>
|
||||
<Select
|
||||
key="toolbar-select"
|
||||
options={selectOptions}
|
||||
value={selectOptions[INITIAL_OPTION_INDEX].value}
|
||||
onChange={onChangeSelect}
|
||||
></Select>
|
||||
</div>
|
||||
</div>
|
||||
);
|
||||
}
|
||||
|
||||
SlabThicknessToolbarComponent.propTypes = {
|
||||
parentContext: PropTypes.object.isRequired,
|
||||
toolbarClickCallback: PropTypes.func.isRequired,
|
||||
button: PropTypes.object.isRequired,
|
||||
activeButtons: PropTypes.array.isRequired,
|
||||
isActive: PropTypes.bool,
|
||||
className: PropTypes.string,
|
||||
};
|
||||
|
||||
export default SlabThicknessToolbarComponent;
|
||||
@@ -0,0 +1,55 @@
|
||||
.slab-thickness
|
||||
display: flex;
|
||||
flex-direction: row;
|
||||
align-items: flex-end;
|
||||
height: 60px;
|
||||
margin-top: -12px;
|
||||
&:hover
|
||||
color: var(--default-color);
|
||||
.container
|
||||
padding-right: 10px;
|
||||
height: inherit;
|
||||
display: flex;
|
||||
flex-direction: column;
|
||||
justify-content: space-between;
|
||||
.toolbar-slider-container
|
||||
width: 80px;
|
||||
margin: 0px 2px 2px 2px;
|
||||
font-size: 12px;
|
||||
&:hover
|
||||
color: var(--hover-color);
|
||||
input
|
||||
height: 20px;
|
||||
padding-top: 6px;
|
||||
&::-moz-range-thumb
|
||||
height: 16px;
|
||||
margin-top: -7px;
|
||||
&::-webkit-slider-thumb
|
||||
height: 16px;
|
||||
margin-top: -7px;
|
||||
.controller
|
||||
width: 62px;
|
||||
.ohif-check-container
|
||||
margin-bottom: 5px;
|
||||
padding-left: 18px;
|
||||
.ohif-check-label
|
||||
text-transform: capitalize;
|
||||
&:hover
|
||||
color: var(--hover-color);
|
||||
.ohif-checkbox
|
||||
border-radius: 3px;
|
||||
background-color: white;
|
||||
width: 12px;
|
||||
height: 12px;
|
||||
top: 22%;
|
||||
&.ohif-checked:after
|
||||
background-color: var(--active-color);
|
||||
top: 17%;
|
||||
left: 17%;
|
||||
.select-ohif
|
||||
color: var(--default-color);
|
||||
border-color: var(--default-color);
|
||||
background-color: black;
|
||||
background-image: url('data:image/svg+xml;charset=US-ASCII,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22292.4%22%20height%3D%22292.4%22%3E%3Cpath%20fill%3D%22%23007CB2%22%20d%3D%22M287%2069.4a17.6%2017.6%200%200%200-13-5.4H18.4c-5%200-9.3%201.8-12.9%205.4A17.6%2017.6%200%200%200%200%2082.2c0%205%201.8%209.3%205.4%2012.9l128%20127.9c3.6%203.6%207.8%205.4%2012.8%205.4s9.2-1.8%2012.8-5.4L287%2095c3.5-3.5%205.4-7.8%205.4-12.8%200-5-1.9-9.2-5.5-12.8z%22%2F%3E%3C%2Fsvg%3E');
|
||||
&:hover
|
||||
color: var(--hover-color);
|
||||
@@ -1,3 +1,5 @@
|
||||
import SlabThicknessToolbarComponent from './toolbarComponents/SlabThicknessToolbarComponent';
|
||||
|
||||
const TOOLBAR_BUTTON_TYPES = {
|
||||
COMMAND: 'command',
|
||||
SET_TOOL_ACTIVE: 'setToolActive',
|
||||
@@ -31,6 +33,7 @@ const definitions = [
|
||||
commandName: 'enableRotateTool',
|
||||
commandOptions: {},
|
||||
},
|
||||
/*
|
||||
{
|
||||
id: 'setBlendModeToComposite',
|
||||
label: 'Disable MIP',
|
||||
@@ -68,6 +71,50 @@ const definitions = [
|
||||
commandName: 'decreaseSlabThickness',
|
||||
commandOptions: {},
|
||||
},
|
||||
*/
|
||||
{
|
||||
id: 'changeSlabThickness',
|
||||
label: 'Slab Thickness',
|
||||
icon: 'soft-tissue',
|
||||
CustomComponent: SlabThicknessToolbarComponent,
|
||||
commandName: 'setSlabThickness',
|
||||
actionButton: {
|
||||
id: 'setSlabThickness',
|
||||
label: 'slider',
|
||||
type: TOOLBAR_BUTTON_TYPES.COMMAND,
|
||||
commandName: 'setSlabThickness',
|
||||
commandOptions: {},
|
||||
},
|
||||
deactivateButton: {
|
||||
id: 'setBlendModeToComposite',
|
||||
type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
|
||||
commandName: 'setBlendModeToComposite',
|
||||
commandOptions: {},
|
||||
},
|
||||
operationButtons: [
|
||||
{
|
||||
id: 'setBlendModeToMaximumIntensity',
|
||||
label: 'MIP',
|
||||
type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
|
||||
commandName: 'setBlendModeToMaximumIntensity',
|
||||
commandOptions: {},
|
||||
},
|
||||
{
|
||||
id: 'setBlendModeToMinimumIntensity',
|
||||
label: 'MinIP',
|
||||
type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
|
||||
commandName: 'setBlendModeToMinimumIntensity',
|
||||
commandOptions: {},
|
||||
},
|
||||
{
|
||||
id: 'setBlendModeToAverageIntensity',
|
||||
label: 'AvgIP',
|
||||
type: TOOLBAR_BUTTON_TYPES.SET_TOOL_ACTIVE,
|
||||
commandName: 'setBlendModeToAverageIntensity',
|
||||
commandOptions: {},
|
||||
},
|
||||
],
|
||||
},
|
||||
];
|
||||
|
||||
export default {
|
||||
|
||||
@@ -0,0 +1,28 @@
|
||||
const subscriptions = [];
|
||||
|
||||
// This is pretty hacky right now, but it makes sure we don't keep adding subscriptions.
|
||||
// TODO -> Nuke this and move it up a layer once we have more vigorous layout support.
|
||||
|
||||
const vtkViewportSubscriptionManager = {
|
||||
subscriptions,
|
||||
pushSubscription(viewportIndex, subscription) {
|
||||
if (!Array.isArray(subscriptions[viewportIndex])) {
|
||||
subscriptions[viewportIndex] = [];
|
||||
}
|
||||
|
||||
subscriptions[viewportIndex].push(subscription);
|
||||
},
|
||||
unsubscribe(viewportIndex) {
|
||||
if (!subscriptions[viewportIndex]) {
|
||||
return;
|
||||
}
|
||||
|
||||
while (subscriptions[viewportIndex].length) {
|
||||
subscriptions[viewportIndex].pop().unsubscribe();
|
||||
}
|
||||
|
||||
subscriptions[viewportIndex] = null;
|
||||
},
|
||||
};
|
||||
|
||||
export default vtkViewportSubscriptionManager;
|
||||
@@ -22,6 +22,7 @@
|
||||
"dev:project": ".scripts/dev.sh",
|
||||
"dev:orthanc": "lerna run dev:orthanc --stream",
|
||||
"orthanc:up": "docker-compose -f .docker/Nginx-Orthanc/docker-compose.yml up",
|
||||
"start": "yarn run dev",
|
||||
"test": "yarn run test:unit",
|
||||
"test:unit": "jest --collectCoverage",
|
||||
"test:unit:ci": "lerna run test:unit:ci --parallel --stream",
|
||||
|
||||
@@ -3,6 +3,44 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
# [1.2.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.1.0...@ohif/core@1.2.0) (2019-10-09)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* OHIF-1002 Study lazy load should be true by default ([#1004](https://github.com/OHIF/Viewers/issues/1004)) ([66d8bc6](https://github.com/OHIF/Viewers/commit/66d8bc6))
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Allow a server requestOptions.auth to be a function that returns the Authorization header. ([#928](https://github.com/OHIF/Viewers/issues/928)) ([0064a4b](https://github.com/OHIF/Viewers/commit/0064a4b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.1.0](https://github.com/OHIF/Viewers/compare/@ohif/core@1.0.2...@ohif/core@1.1.0) (2019-10-03)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Use QIDO + WADO to load series metadata individually rather than the entire study metadata at once ([#953](https://github.com/OHIF/Viewers/issues/953)) ([9e10c2b](https://github.com/OHIF/Viewers/commit/9e10c2b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.0.2](https://github.com/OHIF/Viewers/compare/@ohif/core@1.0.1...@ohif/core@1.0.2) (2019-10-02)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Temporarily sort SEG files to the end of the display set list as a workaround for several metadata issues ([#987](https://github.com/OHIF/Viewers/issues/987)) ([b3b4c10](https://github.com/OHIF/Viewers/commit/b3b4c10))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.0.1](https://github.com/OHIF/Viewers/compare/@ohif/core@1.0.0...@ohif/core@1.0.1) (2019-09-27)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/core",
|
||||
"version": "1.0.1",
|
||||
"version": "1.2.0",
|
||||
"description": "Generic business logic for web-based medical imaging applications",
|
||||
"author": "OHIF Core Team",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -9,7 +9,7 @@ import user from '../user';
|
||||
* @export
|
||||
* @param {Object} [server={}]
|
||||
* @param {Object} [server.requestOptions]
|
||||
* @param {string} [server.requestOptions.auth]
|
||||
* @param {string|function} [server.requestOptions.auth]
|
||||
* @returns {Object} { Authorization }
|
||||
*/
|
||||
export default function getAuthorizationHeader({ requestOptions } = {}) {
|
||||
@@ -19,8 +19,13 @@ export default function getAuthorizationHeader({ requestOptions } = {}) {
|
||||
const accessToken = user && user.getAccessToken && user.getAccessToken();
|
||||
|
||||
if (requestOptions && requestOptions.auth) {
|
||||
// HTTP Basic Auth (user:password)
|
||||
headers.Authorization = `Basic ${btoa(requestOptions.auth)}`;
|
||||
if (typeof requestOptions.auth === 'function') {
|
||||
// Custom Auth Header
|
||||
headers.Authorization = requestOptions.auth(requestOptions);
|
||||
} else {
|
||||
// HTTP Basic Auth (user:password)
|
||||
headers.Authorization = `Basic ${btoa(requestOptions.auth)}`;
|
||||
}
|
||||
} else if (accessToken) {
|
||||
headers.Authorization = `Bearer ${accessToken}`;
|
||||
}
|
||||
|
||||
@@ -7,10 +7,7 @@ describe('getAuthorizationHeader', () => {
|
||||
it('should return a HTTP Basic Auth when server contains requestOptions.auth', () => {
|
||||
const validServer = {
|
||||
requestOptions: {
|
||||
auth: {
|
||||
user: 'dummy_user',
|
||||
password: 'dummy_password',
|
||||
},
|
||||
auth: 'dummy_user:dummy_password',
|
||||
},
|
||||
};
|
||||
|
||||
@@ -26,9 +23,7 @@ describe('getAuthorizationHeader', () => {
|
||||
it('should return a HTTP Basic Auth when server contains requestOptions.auth even though there is no password', () => {
|
||||
const validServerWithoutPassword = {
|
||||
requestOptions: {
|
||||
auth: {
|
||||
user: 'dummy_user',
|
||||
},
|
||||
auth: 'dummy_user',
|
||||
},
|
||||
};
|
||||
|
||||
@@ -43,22 +38,19 @@ describe('getAuthorizationHeader', () => {
|
||||
expect(authentication).toEqual(expectedAuthorizationHeader);
|
||||
});
|
||||
|
||||
it('should return a HTTP Basic Auth when server contains requestOptions.auth even though there is no username', () => {
|
||||
const validServerWithoutPassword = {
|
||||
it('should return a HTTP Basic Auth when server contains requestOptions.auth custom function', () => {
|
||||
const validServerCustomAuth = {
|
||||
requestOptions: {
|
||||
auth: {
|
||||
user: 'dummy_user',
|
||||
},
|
||||
auth: options => `Basic ${options.token}`,
|
||||
token: 'ZHVtbXlfdXNlcjpkdW1teV9wYXNzd29yZA==',
|
||||
},
|
||||
};
|
||||
|
||||
const expectedAuthorizationHeader = {
|
||||
Authorization: `Basic ${btoa(
|
||||
validServerWithoutPassword.requestOptions.auth
|
||||
)}`,
|
||||
Authorization: `Basic ${validServerCustomAuth.requestOptions.token}`,
|
||||
};
|
||||
|
||||
const authentication = getAuthorizationHeader(validServerWithoutPassword);
|
||||
const authentication = getAuthorizationHeader(validServerCustomAuth);
|
||||
|
||||
expect(authentication).toEqual(expectedAuthorizationHeader);
|
||||
});
|
||||
|
||||
@@ -1,10 +1,12 @@
|
||||
// import { api } from 'dicomweb-client'
|
||||
|
||||
const api = {
|
||||
DICOMwebClient: jest.fn().mockImplementation(() => {
|
||||
return {
|
||||
retrieveStudyMetadata: jest.fn().mockResolvedValue([]),
|
||||
};
|
||||
DICOMwebClient: jest.fn().mockImplementation(function() {
|
||||
this.retrieveStudyMetadata = jest.fn().mockResolvedValue([]);
|
||||
this.retrieveSeriesMetadata = jest.fn(function(options) {
|
||||
const { studyInstanceUID, seriesInstanceUID } = options;
|
||||
return Promise.resolve([{ studyInstanceUID, seriesInstanceUID }]);
|
||||
});
|
||||
}),
|
||||
};
|
||||
|
||||
|
||||
@@ -8,7 +8,8 @@ import { SeriesMetadata } from './SeriesMetadata';
|
||||
// - createStacks
|
||||
import { api } from 'dicomweb-client';
|
||||
// - createStacks
|
||||
import { isImage } from './../../utils/isImage';
|
||||
import { isImage } from '../../utils/isImage';
|
||||
import isLowPriorityModality from '../../utils/isLowPriorityModality';
|
||||
|
||||
export class StudyMetadata extends Metadata {
|
||||
constructor(data, uid) {
|
||||
@@ -88,6 +89,100 @@ export class StudyMetadata extends Metadata {
|
||||
return this._displaySets.slice();
|
||||
}
|
||||
|
||||
/**
|
||||
* Split a series metadata object into display sets
|
||||
* @param {Array} sopClassHandlerModules List of SOP Class Modules
|
||||
* @param {SeriesMetadata} series The series metadata object from which the display sets will be created
|
||||
* @param {Array} [givenDisplaySets] An optional list to which the display sets will be appended
|
||||
* @returns {Array} The list of display sets created for the given series object
|
||||
*/
|
||||
_createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series,
|
||||
givenDisplaySets
|
||||
) {
|
||||
const study = this;
|
||||
const displaySets = Array.isArray(givenDisplaySets) ? givenDisplaySets : [];
|
||||
const anyInstances = series.getInstanceCount() > 0;
|
||||
|
||||
if (!anyInstances) {
|
||||
return;
|
||||
}
|
||||
|
||||
const sopClassUids = getSopClassUids(series);
|
||||
|
||||
if (sopClassHandlerModules && sopClassHandlerModules.length > 0) {
|
||||
const displaySet = _getDisplaySetFromSopClassModule(
|
||||
sopClassHandlerModules,
|
||||
series,
|
||||
study,
|
||||
sopClassUids
|
||||
);
|
||||
if (displaySet) {
|
||||
displaySet.sopClassModule = true;
|
||||
displaySets.push(displaySet);
|
||||
return;
|
||||
}
|
||||
}
|
||||
|
||||
// WE NEED A BETTER WAY TO NOTE THAT THIS IS THE DEFAULT BEHAVIOR FOR LOADING
|
||||
// A DISPLAY SET IF THERE IS NO MATCHING SOP CLASS PLUGIN
|
||||
|
||||
// Search through the instances (InstanceMetadata object) of this series
|
||||
// Split Multi-frame instances and Single-image modalities
|
||||
// into their own specific display sets. Place the rest of each
|
||||
// series into another display set.
|
||||
const stackableInstances = [];
|
||||
series.forEachInstance(instance => {
|
||||
// All imaging modalities must have a valid value for sopClassUid (x00080016) or rows (x00280010)
|
||||
if (
|
||||
!isImage(instance.getRawValue('x00080016')) &&
|
||||
!instance.getRawValue('x00280010')
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
let displaySet;
|
||||
|
||||
if (isMultiFrame(instance)) {
|
||||
displaySet = makeDisplaySet(series, [instance]);
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
isClip: true,
|
||||
seriesInstanceUid: series.getSeriesInstanceUID(),
|
||||
studyInstanceUid: study.getStudyInstanceUID(), // Include the study instance Uid for drag/drop purposes
|
||||
numImageFrames: instance.getRawValue('x00280008'), // Override the default value of instances.length
|
||||
instanceNumber: instance.getRawValue('x00200013'), // Include the instance number
|
||||
acquisitionDatetime: instance.getRawValue('x0008002a'), // Include the acquisition datetime
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
} else if (isSingleImageModality(instance.modality)) {
|
||||
displaySet = makeDisplaySet(series, [instance]);
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
studyInstanceUid: study.getStudyInstanceUID(), // Include the study instance Uid
|
||||
seriesInstanceUid: series.getSeriesInstanceUID(),
|
||||
instanceNumber: instance.getRawValue('x00200013'), // Include the instance number
|
||||
acquisitionDatetime: instance.getRawValue('x0008002a'), // Include the acquisition datetime
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
} else {
|
||||
stackableInstances.push(instance);
|
||||
}
|
||||
});
|
||||
|
||||
if (stackableInstances.length) {
|
||||
const displaySet = makeDisplaySet(series, stackableInstances);
|
||||
displaySet.setAttribute('studyInstanceUid', study.getStudyInstanceUID());
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
}
|
||||
|
||||
return displaySets;
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates a set of series to be placed in the Study Metadata
|
||||
* The series that appear in the Study Metadata must represent
|
||||
@@ -101,104 +196,44 @@ export class StudyMetadata extends Metadata {
|
||||
* @returns {Array} An array of series to be placed in the Study Metadata
|
||||
*/
|
||||
createDisplaySets(sopClassHandlerModules) {
|
||||
const study = this;
|
||||
const displaySets = [];
|
||||
const anyDisplaySets = study.getSeriesCount();
|
||||
const anySopClassHandlerModules =
|
||||
sopClassHandlerModules && sopClassHandlerModules.length > 0;
|
||||
const anyDisplaySets = this.getSeriesCount();
|
||||
|
||||
if (!anyDisplaySets) {
|
||||
return displaySets;
|
||||
}
|
||||
|
||||
// Loop through the series (SeriesMetadata)
|
||||
this.forEachSeries(series => {
|
||||
const anyInstances = series.getInstanceCount() > 0;
|
||||
if (!anyInstances) {
|
||||
return;
|
||||
}
|
||||
|
||||
const sopClassUids = getSopClassUids(series);
|
||||
|
||||
if (anySopClassHandlerModules) {
|
||||
const displaySet = _getDisplaySetFromSopClassModule(
|
||||
this.forEachSeries(
|
||||
series =>
|
||||
void this._createDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
series,
|
||||
study,
|
||||
sopClassUids
|
||||
);
|
||||
displaySets
|
||||
)
|
||||
);
|
||||
|
||||
if (displaySet) {
|
||||
displaySet.sopClassModule = true;
|
||||
displaySets.push(displaySet);
|
||||
return sortDisplaySetList(displaySets);
|
||||
}
|
||||
|
||||
return;
|
||||
}
|
||||
}
|
||||
sortDisplaySets() {
|
||||
sortDisplaySetList(this._displaySets);
|
||||
}
|
||||
|
||||
// WE NEED A BETTER WAY TO NOTE THAT THIS IS THE DEFAULT BEHAVIOR FOR LOADING
|
||||
// A DISPLAY SET IF THERE IS NO MATCHING SOP CLASS PLUGIN
|
||||
|
||||
// Search through the instances (InstanceMetadata object) of this series
|
||||
// Split Multi-frame instances and Single-image modalities
|
||||
// into their own specific display sets. Place the rest of each
|
||||
// series into another display set.
|
||||
const stackableInstances = [];
|
||||
series.forEachInstance(instance => {
|
||||
// All imaging modalities must have a valid value for sopClassUid (x00080016) or rows (x00280010)
|
||||
if (
|
||||
!isImage(instance.getRawValue('x00080016')) &&
|
||||
!instance.getRawValue('x00280010')
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
let displaySet;
|
||||
|
||||
if (isMultiFrame(instance)) {
|
||||
displaySet = makeDisplaySet(series, [instance]);
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
isClip: true,
|
||||
seriesInstanceUid: series.getSeriesInstanceUID(),
|
||||
studyInstanceUid: study.getStudyInstanceUID(), // Include the study instance Uid for drag/drop purposes
|
||||
numImageFrames: instance.getRawValue('x00280008'), // Override the default value of instances.length
|
||||
instanceNumber: instance.getRawValue('x00200013'), // Include the instance number
|
||||
acquisitionDatetime: instance.getRawValue('x0008002a'), // Include the acquisition datetime
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
} else if (isSingleImageModality(instance.modality)) {
|
||||
displaySet = makeDisplaySet(series, [instance]);
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
studyInstanceUid: study.getStudyInstanceUID(), // Include the study instance Uid
|
||||
seriesInstanceUid: series.getSeriesInstanceUID(),
|
||||
instanceNumber: instance.getRawValue('x00200013'), // Include the instance number
|
||||
acquisitionDatetime: instance.getRawValue('x0008002a'), // Include the acquisition datetime
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
} else {
|
||||
stackableInstances.push(instance);
|
||||
}
|
||||
});
|
||||
|
||||
if (stackableInstances.length) {
|
||||
const displaySet = makeDisplaySet(series, stackableInstances);
|
||||
displaySet.setAttribute(
|
||||
'studyInstanceUid',
|
||||
study.getStudyInstanceUID()
|
||||
);
|
||||
displaySet.setAttributes({
|
||||
sopClassUids,
|
||||
});
|
||||
displaySets.push(displaySet);
|
||||
}
|
||||
});
|
||||
|
||||
// TODO
|
||||
displaySets.sort(_sortBySeriesNumber);
|
||||
|
||||
return displaySets;
|
||||
/**
|
||||
* Method to append display sets from a given series to the internal list of display sets
|
||||
* @param {Array} sopClassHandlerModules A list of SOP Class Handler Modules
|
||||
* @param {SeriesMetadata} series The series metadata object from which the display sets will be created
|
||||
* @returns {boolean} Returns true on success or false on failure (e.g., the series does not belong to this study)
|
||||
*/
|
||||
createAndAddDisplaySetsForSeries(sopClassHandlerModules, series) {
|
||||
if (this.containsSeries(series)) {
|
||||
this.setDisplaySets(
|
||||
this._createDisplaySetsForSeries(sopClassHandlerModules, series)
|
||||
);
|
||||
return true;
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
/**
|
||||
@@ -206,7 +241,10 @@ export class StudyMetadata extends Metadata {
|
||||
* @param {Array} displaySets Array of display sets (ImageSet[])
|
||||
*/
|
||||
setDisplaySets(displaySets) {
|
||||
displaySets.forEach(displaySet => this.addDisplaySet(displaySet));
|
||||
if (Array.isArray(displaySets) && displaySets.length > 0) {
|
||||
displaySets.forEach(displaySet => this.addDisplaySet(displaySet));
|
||||
this.sortDisplaySets();
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
@@ -320,6 +358,12 @@ export class StudyMetadata extends Metadata {
|
||||
return found;
|
||||
}
|
||||
|
||||
containsSeries(series) {
|
||||
return (
|
||||
series instanceof SeriesMetadata && this._series.indexOf(series) >= 0
|
||||
);
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve the number of series within the current study.
|
||||
* @returns {number} The number of series in the current study.
|
||||
@@ -650,13 +694,51 @@ function _getDisplaySetFromSopClassModule(
|
||||
}
|
||||
|
||||
/**
|
||||
* Sort series primarily by modality (i.e., series with references to other
|
||||
* series like SEG, KO or PR are grouped in the end of the list) and then by
|
||||
* series number:
|
||||
*
|
||||
* --------
|
||||
* | CT #3 |
|
||||
* | CT #4 |
|
||||
* | CT #5 |
|
||||
* --------
|
||||
* | SEG #1 |
|
||||
* | SEG #2 |
|
||||
* --------
|
||||
*
|
||||
* @param {*} a - DisplaySet
|
||||
* @param {*} b - DisplaySet
|
||||
*/
|
||||
function _sortBySeriesNumber(a, b) {
|
||||
|
||||
function seriesSortingCriteria(a, b) {
|
||||
const isLowPriorityA = isLowPriorityModality(a.modality);
|
||||
const isLowPriorityB = isLowPriorityModality(b.modality);
|
||||
if (!isLowPriorityA && isLowPriorityB) {
|
||||
return -1;
|
||||
}
|
||||
if (isLowPriorityA && !isLowPriorityB) {
|
||||
return 1;
|
||||
}
|
||||
return sortBySeriesNumber(a, b);
|
||||
}
|
||||
|
||||
/**
|
||||
* Sort series by series number. Series with low
|
||||
* @param {*} a - DisplaySet
|
||||
* @param {*} b - DisplaySet
|
||||
*/
|
||||
function sortBySeriesNumber(a, b) {
|
||||
const seriesNumberAIsGreaterOrUndefined =
|
||||
a.seriesNumber > b.seriesNumber || (!a.seriesNumber && b.seriesNumber);
|
||||
|
||||
return seriesNumberAIsGreaterOrUndefined ? 1 : -1;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sorts a list of display set objects
|
||||
* @param {Array} list A list of display sets to be sorted
|
||||
*/
|
||||
function sortDisplaySetList(list) {
|
||||
return list.sort(seriesSortingCriteria);
|
||||
}
|
||||
@@ -1,5 +1,8 @@
|
||||
import { api } from 'dicomweb-client';
|
||||
import DICOMWeb from '../../../DICOMWeb/';
|
||||
import isLowPriorityModality from '../../../utils/isLowPriorityModality';
|
||||
|
||||
const INFO = Symbol('INFO');
|
||||
|
||||
const WADOProxy = {
|
||||
convertURL: (url, server) => {
|
||||
@@ -94,9 +97,7 @@ function buildInstanceWadoRsUri(
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
) {
|
||||
return `${
|
||||
server.wadoRoot
|
||||
}/studies/${studyInstanceUid}/series/${seriesInstanceUid}/instances/${sopInstanceUid}`;
|
||||
return `${server.wadoRoot}/studies/${studyInstanceUid}/series/${seriesInstanceUid}/instances/${sopInstanceUid}`;
|
||||
}
|
||||
|
||||
function buildInstanceFrameWadoRsUri(
|
||||
@@ -166,9 +167,9 @@ function getPaletteColor(server, instance, tag, lutDescriptor) {
|
||||
};
|
||||
|
||||
const arrayBufferToPaletteColorLUT = result => {
|
||||
const arraybuffer = result[0]
|
||||
const byteArray = new Uint8Array(arraybuffer)
|
||||
const lut = []
|
||||
const arraybuffer = result[0];
|
||||
const byteArray = new Uint8Array(arraybuffer);
|
||||
const lut = [];
|
||||
|
||||
for (let i = 0; i < numLutEntries; i++) {
|
||||
if (bits === 16) {
|
||||
@@ -271,200 +272,338 @@ function getRadiopharmaceuticalInfo(instance) {
|
||||
};
|
||||
}
|
||||
|
||||
async function makeSOPInstance(server, study, instance) {
|
||||
const { studyInstanceUid } = study;
|
||||
const seriesInstanceUid = DICOMWeb.getString(instance['0020000E']);
|
||||
let series = study.seriesMap[seriesInstanceUid];
|
||||
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesInstanceUid,
|
||||
seriesDescription: DICOMWeb.getString(instance['0008103E']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
seriesNumber: DICOMWeb.getNumber(instance['00200011']),
|
||||
seriesDate: DICOMWeb.getString(instance['00080021']),
|
||||
seriesTime: DICOMWeb.getString(instance['00080031']),
|
||||
instances: [],
|
||||
};
|
||||
study.seriesMap[seriesInstanceUid] = series;
|
||||
study.seriesList.push(series);
|
||||
}
|
||||
|
||||
const sopInstanceUid = DICOMWeb.getString(instance['00080018']);
|
||||
const wadouri = buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const wadorsuri = buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
|
||||
const sopInstance = {
|
||||
imageType: DICOMWeb.getString(instance['00080008']),
|
||||
sopClassUid: DICOMWeb.getString(instance['00080016']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
sopInstanceUid,
|
||||
instanceNumber: DICOMWeb.getNumber(instance['00200013']),
|
||||
imagePositionPatient: DICOMWeb.getString(instance['00200032']),
|
||||
imageOrientationPatient: DICOMWeb.getString(instance['00200037']),
|
||||
frameOfReferenceUID: DICOMWeb.getString(instance['00200052']),
|
||||
sliceLocation: DICOMWeb.getNumber(instance['00201041']),
|
||||
samplesPerPixel: DICOMWeb.getNumber(instance['00280002']),
|
||||
photometricInterpretation: DICOMWeb.getString(instance['00280004']),
|
||||
planarConfiguration: DICOMWeb.getNumber(instance['00280006']),
|
||||
rows: DICOMWeb.getNumber(instance['00280010']),
|
||||
columns: DICOMWeb.getNumber(instance['00280011']),
|
||||
pixelSpacing: DICOMWeb.getString(instance['00280030']),
|
||||
pixelAspectRatio: DICOMWeb.getString(instance['00280034']),
|
||||
bitsAllocated: DICOMWeb.getNumber(instance['00280100']),
|
||||
bitsStored: DICOMWeb.getNumber(instance['00280101']),
|
||||
highBit: DICOMWeb.getNumber(instance['00280102']),
|
||||
pixelRepresentation: DICOMWeb.getNumber(instance['00280103']),
|
||||
smallestPixelValue: DICOMWeb.getNumber(instance['00280106']),
|
||||
largestPixelValue: DICOMWeb.getNumber(instance['00280107']),
|
||||
windowCenter: DICOMWeb.getString(instance['00281050']),
|
||||
windowWidth: DICOMWeb.getString(instance['00281051']),
|
||||
rescaleIntercept: DICOMWeb.getNumber(instance['00281052']),
|
||||
rescaleSlope: DICOMWeb.getNumber(instance['00281053']),
|
||||
rescaleType: DICOMWeb.getNumber(instance['00281054']),
|
||||
sourceImageInstanceUid: getSourceImageInstanceUid(instance),
|
||||
laterality: DICOMWeb.getString(instance['00200062']),
|
||||
viewPosition: DICOMWeb.getString(instance['00185101']),
|
||||
acquisitionDateTime: DICOMWeb.getString(instance['0008002A']),
|
||||
numberOfFrames: DICOMWeb.getNumber(instance['00280008']),
|
||||
frameIncrementPointer: getFrameIncrementPointer(instance['00280009']),
|
||||
frameTime: DICOMWeb.getNumber(instance['00181063']),
|
||||
frameTimeVector: parseFloatArray(DICOMWeb.getString(instance['00181065'])),
|
||||
sliceThickness: DICOMWeb.getNumber(instance['00180050']),
|
||||
spacingBetweenSlices: DICOMWeb.getString(instance['00180088']),
|
||||
lossyImageCompression: DICOMWeb.getString(instance['00282110']),
|
||||
derivationDescription: DICOMWeb.getString(instance['00282111']),
|
||||
lossyImageCompressionRatio: DICOMWeb.getString(instance['00282112']),
|
||||
lossyImageCompressionMethod: DICOMWeb.getString(instance['00282114']),
|
||||
echoNumber: DICOMWeb.getString(instance['00180086']),
|
||||
contrastBolusAgent: DICOMWeb.getString(instance['00180010']),
|
||||
radiopharmaceuticalInfo: getRadiopharmaceuticalInfo(instance),
|
||||
baseWadoRsUri: baseWadoRsUri,
|
||||
wadouri: WADOProxy.convertURL(wadouri, server),
|
||||
wadorsuri: WADOProxy.convertURL(wadorsuri, server),
|
||||
wadoRoot: server.wadoRoot,
|
||||
imageRendering: server.imageRendering,
|
||||
thumbnailRendering: server.thumbnailRendering,
|
||||
};
|
||||
|
||||
// Get additional information if the instance uses "PALETTE COLOR" photometric interpretation
|
||||
if (sopInstance.photometricInterpretation === 'PALETTE COLOR') {
|
||||
const redPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281101'])
|
||||
);
|
||||
const greenPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281102'])
|
||||
);
|
||||
const bluePaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281103'])
|
||||
);
|
||||
const palettes = await getPaletteColors(
|
||||
server,
|
||||
instance,
|
||||
redPaletteColorLookupTableDescriptor
|
||||
);
|
||||
|
||||
if (palettes) {
|
||||
if (palettes.uid) {
|
||||
sopInstance.paletteColorLookupTableUID = palettes.uid;
|
||||
}
|
||||
|
||||
sopInstance.redPaletteColorLookupTableData = palettes.red;
|
||||
sopInstance.greenPaletteColorLookupTableData = palettes.green;
|
||||
sopInstance.bluePaletteColorLookupTableData = palettes.blue;
|
||||
sopInstance.redPaletteColorLookupTableDescriptor = redPaletteColorLookupTableDescriptor;
|
||||
sopInstance.greenPaletteColorLookupTableDescriptor = greenPaletteColorLookupTableDescriptor;
|
||||
sopInstance.bluePaletteColorLookupTableDescriptor = bluePaletteColorLookupTableDescriptor;
|
||||
}
|
||||
}
|
||||
|
||||
series.instances.push(sopInstance);
|
||||
return sopInstance;
|
||||
}
|
||||
|
||||
/**
|
||||
* Create a plain JS object that describes a study (a study descriptor object)
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Object} aSopInstance a SOP Instance from which study information will be added
|
||||
*/
|
||||
function createStudy(server, aSopInstance) {
|
||||
// TODO: Pass a reference ID to the server instead of including the URLs here
|
||||
return {
|
||||
seriesList: [],
|
||||
seriesMap: Object.create(null),
|
||||
seriesLoader: null,
|
||||
wadoUriRoot: server.wadoUriRoot,
|
||||
wadoRoot: server.wadoRoot,
|
||||
qidoRoot: server.qidoRoot,
|
||||
patientName: DICOMWeb.getName(aSopInstance['00100010']),
|
||||
patientId: DICOMWeb.getString(aSopInstance['00100020']),
|
||||
patientAge: DICOMWeb.getNumber(aSopInstance['00101010']),
|
||||
patientSize: DICOMWeb.getNumber(aSopInstance['00101020']),
|
||||
patientWeight: DICOMWeb.getNumber(aSopInstance['00101030']),
|
||||
accessionNumber: DICOMWeb.getString(aSopInstance['00080050']),
|
||||
studyDate: DICOMWeb.getString(aSopInstance['00080020']),
|
||||
modalities: DICOMWeb.getString(aSopInstance['00080061']),
|
||||
studyDescription: DICOMWeb.getString(aSopInstance['00081030']),
|
||||
imageCount: DICOMWeb.getString(aSopInstance['00201208']),
|
||||
studyInstanceUid: DICOMWeb.getString(aSopInstance['0020000D']),
|
||||
institutionName: DICOMWeb.getString(aSopInstance['00080080']),
|
||||
};
|
||||
}
|
||||
|
||||
/**
|
||||
* Add a list of SOP Instances to a given study object descriptor
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Object} study The study descriptor to which the given SOP instances will be added
|
||||
* @param {Array} sopInstanceList A list of SOP instance objects
|
||||
*/
|
||||
async function addInstancesToStudy(server, study, sopInstanceList) {
|
||||
return Promise.all(
|
||||
sopInstanceList.map(function(sopInstance) {
|
||||
return makeSOPInstance(server, study, sopInstance);
|
||||
})
|
||||
);
|
||||
}
|
||||
|
||||
/**
|
||||
* Parses result data from a WADO search into Study MetaData
|
||||
* Returns an object populated with study metadata, including the
|
||||
* series list.
|
||||
*
|
||||
* @param server
|
||||
* @param studyInstanceUid
|
||||
* @param resultData
|
||||
* @returns {{seriesList: Array, patientName: *, patientId: *, accessionNumber: *, studyDate: *, modalities: *, studyDescription: *, imageCount: *, studyInstanceUid: *}}
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {Array} sopInstanceList List of SOP Instances that build up to the study
|
||||
* @resolves {{seriesList: Array, patientName: *, patientId: *, accessionNumber: *, studyDate: *, modalities: *, studyDescription: *, imageCount: *, studyInstanceUid: *}}
|
||||
*/
|
||||
async function resultDataToStudyMetadata(server, studyInstanceUid, resultData) {
|
||||
if (!resultData.length) {
|
||||
return;
|
||||
async function createStudyFromSOPInstanceList(server, sopInstanceList) {
|
||||
if (Array.isArray(sopInstanceList) && sopInstanceList.length > 0) {
|
||||
const firstSopInstance = sopInstanceList[0];
|
||||
const study = createStudy(server, firstSopInstance);
|
||||
await addInstancesToStudy(server, study, sopInstanceList);
|
||||
return study;
|
||||
}
|
||||
|
||||
const anInstance = resultData[0];
|
||||
if (!anInstance) {
|
||||
return;
|
||||
}
|
||||
|
||||
// TODO: Pass a reference ID to the server instead of including the URLs here
|
||||
const studyData = {
|
||||
seriesList: [],
|
||||
wadoUriRoot: server.wadoUriRoot,
|
||||
wadoRoot: server.wadoRoot,
|
||||
qidoRoot: server.qidoRoot,
|
||||
patientName: DICOMWeb.getName(anInstance['00100010']),
|
||||
patientId: DICOMWeb.getString(anInstance['00100020']),
|
||||
patientAge: DICOMWeb.getNumber(anInstance['00101010']),
|
||||
patientSize: DICOMWeb.getNumber(anInstance['00101020']),
|
||||
patientWeight: DICOMWeb.getNumber(anInstance['00101030']),
|
||||
accessionNumber: DICOMWeb.getString(anInstance['00080050']),
|
||||
studyDate: DICOMWeb.getString(anInstance['00080020']),
|
||||
modalities: DICOMWeb.getString(anInstance['00080061']),
|
||||
studyDescription: DICOMWeb.getString(anInstance['00081030']),
|
||||
imageCount: DICOMWeb.getString(anInstance['00201208']),
|
||||
studyInstanceUid: DICOMWeb.getString(anInstance['0020000D']),
|
||||
institutionName: DICOMWeb.getString(anInstance['00080080']),
|
||||
};
|
||||
|
||||
const seriesMap = {};
|
||||
|
||||
await Promise.all(
|
||||
resultData.map(async function(instance) {
|
||||
const seriesInstanceUid = DICOMWeb.getString(instance['0020000E']);
|
||||
let series = seriesMap[seriesInstanceUid];
|
||||
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesDescription: DICOMWeb.getString(instance['0008103E']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
seriesInstanceUid: seriesInstanceUid,
|
||||
seriesNumber: DICOMWeb.getNumber(instance['00200011']),
|
||||
seriesDate: DICOMWeb.getString(instance['00080021']),
|
||||
seriesTime: DICOMWeb.getString(instance['00080031']),
|
||||
instances: [],
|
||||
};
|
||||
seriesMap[seriesInstanceUid] = series;
|
||||
studyData.seriesList.push(series);
|
||||
}
|
||||
|
||||
const sopInstanceUid = DICOMWeb.getString(instance['00080018']);
|
||||
const wadouri = buildInstanceWadoUrl(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const baseWadoRsUri = buildInstanceWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
const wadorsuri = buildInstanceFrameWadoRsUri(
|
||||
server,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUid,
|
||||
sopInstanceUid
|
||||
);
|
||||
|
||||
const instanceSummary = {
|
||||
imageType: DICOMWeb.getString(instance['00080008']),
|
||||
sopClassUid: DICOMWeb.getString(instance['00080016']),
|
||||
modality: DICOMWeb.getString(instance['00080060']),
|
||||
sopInstanceUid,
|
||||
instanceNumber: DICOMWeb.getNumber(instance['00200013']),
|
||||
imagePositionPatient: DICOMWeb.getString(instance['00200032']),
|
||||
imageOrientationPatient: DICOMWeb.getString(instance['00200037']),
|
||||
frameOfReferenceUID: DICOMWeb.getString(instance['00200052']),
|
||||
sliceLocation: DICOMWeb.getNumber(instance['00201041']),
|
||||
samplesPerPixel: DICOMWeb.getNumber(instance['00280002']),
|
||||
photometricInterpretation: DICOMWeb.getString(instance['00280004']),
|
||||
planarConfiguration: DICOMWeb.getNumber(instance['00280006']),
|
||||
rows: DICOMWeb.getNumber(instance['00280010']),
|
||||
columns: DICOMWeb.getNumber(instance['00280011']),
|
||||
pixelSpacing: DICOMWeb.getString(instance['00280030']),
|
||||
pixelAspectRatio: DICOMWeb.getString(instance['00280034']),
|
||||
bitsAllocated: DICOMWeb.getNumber(instance['00280100']),
|
||||
bitsStored: DICOMWeb.getNumber(instance['00280101']),
|
||||
highBit: DICOMWeb.getNumber(instance['00280102']),
|
||||
pixelRepresentation: DICOMWeb.getNumber(instance['00280103']),
|
||||
smallestPixelValue: DICOMWeb.getNumber(instance['00280106']),
|
||||
largestPixelValue: DICOMWeb.getNumber(instance['00280107']),
|
||||
windowCenter: DICOMWeb.getString(instance['00281050']),
|
||||
windowWidth: DICOMWeb.getString(instance['00281051']),
|
||||
rescaleIntercept: DICOMWeb.getNumber(instance['00281052']),
|
||||
rescaleSlope: DICOMWeb.getNumber(instance['00281053']),
|
||||
rescaleType: DICOMWeb.getNumber(instance['00281054']),
|
||||
sourceImageInstanceUid: getSourceImageInstanceUid(instance),
|
||||
laterality: DICOMWeb.getString(instance['00200062']),
|
||||
viewPosition: DICOMWeb.getString(instance['00185101']),
|
||||
acquisitionDateTime: DICOMWeb.getString(instance['0008002A']),
|
||||
numberOfFrames: DICOMWeb.getNumber(instance['00280008']),
|
||||
frameIncrementPointer: getFrameIncrementPointer(instance['00280009']),
|
||||
frameTime: DICOMWeb.getNumber(instance['00181063']),
|
||||
frameTimeVector: parseFloatArray(
|
||||
DICOMWeb.getString(instance['00181065'])
|
||||
),
|
||||
sliceThickness: DICOMWeb.getNumber(instance['00180050']),
|
||||
spacingBetweenSlices: DICOMWeb.getString(instance['00180088']),
|
||||
lossyImageCompression: DICOMWeb.getString(instance['00282110']),
|
||||
derivationDescription: DICOMWeb.getString(instance['00282111']),
|
||||
lossyImageCompressionRatio: DICOMWeb.getString(instance['00282112']),
|
||||
lossyImageCompressionMethod: DICOMWeb.getString(instance['00282114']),
|
||||
echoNumber: DICOMWeb.getString(instance['00180086']),
|
||||
contrastBolusAgent: DICOMWeb.getString(instance['00180010']),
|
||||
radiopharmaceuticalInfo: getRadiopharmaceuticalInfo(instance),
|
||||
baseWadoRsUri: baseWadoRsUri,
|
||||
wadouri: WADOProxy.convertURL(wadouri, server),
|
||||
wadorsuri: WADOProxy.convertURL(wadorsuri, server),
|
||||
wadoRoot: server.wadoRoot,
|
||||
imageRendering: server.imageRendering,
|
||||
thumbnailRendering: server.thumbnailRendering,
|
||||
};
|
||||
|
||||
// Get additional information if the instance uses "PALETTE COLOR" photometric interpretation
|
||||
if (instanceSummary.photometricInterpretation === 'PALETTE COLOR') {
|
||||
const redPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281101'])
|
||||
);
|
||||
const greenPaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281102'])
|
||||
);
|
||||
const bluePaletteColorLookupTableDescriptor = parseFloatArray(
|
||||
DICOMWeb.getString(instance['00281103'])
|
||||
);
|
||||
const palettes = await getPaletteColors(
|
||||
server,
|
||||
instance,
|
||||
redPaletteColorLookupTableDescriptor
|
||||
);
|
||||
|
||||
if (palettes) {
|
||||
if (palettes.uid) {
|
||||
instanceSummary.paletteColorLookupTableUID = palettes.uid;
|
||||
}
|
||||
|
||||
instanceSummary.redPaletteColorLookupTableData = palettes.red;
|
||||
instanceSummary.greenPaletteColorLookupTableData = palettes.green;
|
||||
instanceSummary.bluePaletteColorLookupTableData = palettes.blue;
|
||||
instanceSummary.redPaletteColorLookupTableDescriptor = redPaletteColorLookupTableDescriptor;
|
||||
instanceSummary.greenPaletteColorLookupTableDescriptor = greenPaletteColorLookupTableDescriptor;
|
||||
instanceSummary.bluePaletteColorLookupTableDescriptor = bluePaletteColorLookupTableDescriptor;
|
||||
}
|
||||
}
|
||||
|
||||
series.instances.push(instanceSummary);
|
||||
})
|
||||
);
|
||||
|
||||
return studyData;
|
||||
throw new Error('Failed to create study out of provided SOP instance list');
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve Study MetaData from a DICOM server using a WADO call
|
||||
*
|
||||
* @param server
|
||||
* @param studyInstanceUid
|
||||
* @returns {Promise}
|
||||
* Retrieve Study metadata from a DICOM server. If the server is configured to use lazy load, only the first series
|
||||
* will be loaded and the property "studyLoader" will be set to let consumer load remaining series as needed
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {string} studyInstanceUid The Study Instance UID of the study which needs to be loaded
|
||||
* @returns {Object} A study descriptor object
|
||||
*/
|
||||
async function RetrieveMetadata(server, studyInstanceUid) {
|
||||
const config = {
|
||||
return (server.enableStudyLazyLoad !== false
|
||||
? lazyLoadStudyMetadata
|
||||
: loadStudyMetadata)(server, studyInstanceUid);
|
||||
}
|
||||
|
||||
/**
|
||||
*
|
||||
* @param {*} server
|
||||
* @param {*} studyInstanceUID
|
||||
*/
|
||||
async function loadStudyMetadata(server, studyInstanceUID) {
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
};
|
||||
const dicomWeb = new api.DICOMwebClient(config);
|
||||
const options = {
|
||||
studyInstanceUID: studyInstanceUid,
|
||||
};
|
||||
});
|
||||
return dicomWeb
|
||||
.retrieveStudyMetadata({ studyInstanceUID })
|
||||
.then(result => createStudyFromSOPInstanceList(server, result));
|
||||
}
|
||||
|
||||
return dicomWeb.retrieveStudyMetadata(options).then(result => {
|
||||
return resultDataToStudyMetadata(server, studyInstanceUid, result);
|
||||
async function lazyLoadStudyMetadata(server, studyInstanceUid) {
|
||||
const seriesInstanceUids = await searchStudySeries(server, studyInstanceUid);
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.wadoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
const seriesLoader = makeSeriesLoader(
|
||||
dicomWeb,
|
||||
studyInstanceUid,
|
||||
seriesInstanceUids
|
||||
);
|
||||
const firstSeries = await seriesLoader.next();
|
||||
const study = await createStudyFromSOPInstanceList(
|
||||
server,
|
||||
firstSeries.sopInstances
|
||||
);
|
||||
if (seriesLoader.hasNext()) {
|
||||
attachSeriesLoader(server, study, seriesLoader);
|
||||
}
|
||||
return study;
|
||||
}
|
||||
|
||||
function attachSeriesLoader(server, study, seriesLoader) {
|
||||
study.seriesLoader = Object.freeze({
|
||||
hasNext() {
|
||||
return seriesLoader.hasNext();
|
||||
},
|
||||
async next() {
|
||||
const series = await seriesLoader.next();
|
||||
await addInstancesToStudy(server, study, series.sopInstances);
|
||||
return study.seriesMap[series.seriesInstanceUID];
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates an immutable series loader object which loads each series sequentially using the iterator interface
|
||||
* @param {DICOMWebClient} dicomWebClient The DICOMWebClient instance to be used for series load
|
||||
* @param {string} studyInstanceUID The Study Instance UID from which series will be loaded
|
||||
* @param {Array} seriesInstanceUIDList A list of Series Instance UIDs
|
||||
* @returns {Object} Returns an object which supports loading of instances from each of given Series Instance UID
|
||||
*/
|
||||
function makeSeriesLoader(
|
||||
dicomWebClient,
|
||||
studyInstanceUID,
|
||||
seriesInstanceUIDList
|
||||
) {
|
||||
return Object.freeze({
|
||||
hasNext() {
|
||||
return seriesInstanceUIDList.length > 0;
|
||||
},
|
||||
async next() {
|
||||
const seriesInstanceUID = seriesInstanceUIDList.shift();
|
||||
const sopInstances = await dicomWebClient.retrieveSeriesMetadata({
|
||||
studyInstanceUID,
|
||||
seriesInstanceUID,
|
||||
});
|
||||
return { studyInstanceUID, seriesInstanceUID, sopInstances };
|
||||
},
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Search series of a given study
|
||||
* @param {Object} server Object with server configuration paramenters
|
||||
* @param {string} studyInstanceUID The Study Instance UID to search series from;
|
||||
* @returns {Arrays} A list of Series Instance UIDs
|
||||
*/
|
||||
async function searchStudySeries(server, studyInstanceUID) {
|
||||
const dicomWeb = new api.DICOMwebClient({
|
||||
url: server.qidoRoot,
|
||||
headers: DICOMWeb.getAuthorizationHeader(server),
|
||||
});
|
||||
const seriesList = await dicomWeb.searchForSeries({ studyInstanceUID });
|
||||
return seriesList
|
||||
.sort(seriesSortingCriteria)
|
||||
.map(series => getSeriesInfo(series).seriesInstanceUid);
|
||||
}
|
||||
|
||||
/**
|
||||
* Series sorting criteria: series considered low priority are moved to the end
|
||||
* of the list and series number is used to break ties
|
||||
* @param {Object} firstSeries
|
||||
* @param {Object} secondSeries
|
||||
*/
|
||||
function seriesSortingCriteria(firstSeries, secondSeries) {
|
||||
const a = getSeriesInfo(firstSeries);
|
||||
const b = getSeriesInfo(secondSeries);
|
||||
if (!a.isLowPriority && b.isLowPriority) {
|
||||
return -1;
|
||||
}
|
||||
if (a.isLowPriority && !b.isLowPriority) {
|
||||
return 1;
|
||||
}
|
||||
return a.seriesNumber - b.seriesNumber;
|
||||
}
|
||||
|
||||
/**
|
||||
* Creates an object with processed series information and saves its reference
|
||||
* inside the series object itself to simplify sorting
|
||||
* @param {Object} series The raw series object
|
||||
*/
|
||||
function getSeriesInfo(series) {
|
||||
let info = series[INFO];
|
||||
if (!info) {
|
||||
const modality = DICOMWeb.getString(series['00080060'], '').toUpperCase();
|
||||
info = Object.freeze({
|
||||
modality,
|
||||
isLowPriority: isLowPriorityModality(modality),
|
||||
seriesInstanceUid: DICOMWeb.getString(series['0020000E']),
|
||||
seriesNumber: DICOMWeb.getNumber(series['00200011'], 0) || 0,
|
||||
});
|
||||
series[INFO] = info;
|
||||
}
|
||||
return info;
|
||||
}
|
||||
|
||||
export default RetrieveMetadata;
|
||||
@@ -0,0 +1,5 @@
|
||||
const LOW_PRIORITY_MODALITIES = Object.freeze(['SEG', 'KO', 'PR']);
|
||||
|
||||
export default function isLowPriorityModality(modality) {
|
||||
return LOW_PRIORITY_MODALITIES.includes(modality);
|
||||
}
|
||||
@@ -70,32 +70,48 @@ const getWadoRsInstanceMetaData = (study, series, instance) => {
|
||||
.toJSON();
|
||||
};
|
||||
|
||||
export default function updateMetaDataManager(study) {
|
||||
study.seriesList.forEach(series => {
|
||||
series.instances.forEach(instance => {
|
||||
// Cache just images that are going to be loaded via WADO-RS
|
||||
if (
|
||||
instance.imageRendering !== 'wadors' &&
|
||||
instance.thumbnailRendering !== 'wadors'
|
||||
) {
|
||||
return;
|
||||
}
|
||||
/**
|
||||
* Update metadata manager with instances of a specifc series
|
||||
* @param {Object} study A plain study descriptor object
|
||||
* @param {Object} series A Series descriptor object contaning the instances to be added to the manager
|
||||
*/
|
||||
function updateMetaDataManagerForSeries(study, series) {
|
||||
series.instances.forEach(instance => {
|
||||
// Cache just images that are going to be loaded via WADO-RS
|
||||
if (
|
||||
instance.imageRendering !== 'wadors' &&
|
||||
instance.thumbnailRendering !== 'wadors'
|
||||
) {
|
||||
return;
|
||||
}
|
||||
|
||||
const metaData = getWadoRsInstanceMetaData(study, series, instance);
|
||||
const numberOfFrames = instance.numberOfFrames || 1;
|
||||
const metaData = getWadoRsInstanceMetaData(study, series, instance);
|
||||
const numberOfFrames = instance.numberOfFrames || 1;
|
||||
|
||||
// We can share the same metaData with all frames because it doesn't have
|
||||
// any frame specific data, such as frameNumber, pixelData, offset, etc.
|
||||
// WADO-RS frame number is 1-based
|
||||
for (let frameNumber = 0; frameNumber < numberOfFrames; frameNumber++) {
|
||||
const imageId = getWADORSImageId(instance, frameNumber);
|
||||
// We can share the same metaData with all frames because it doesn't have
|
||||
// any frame specific data, such as frameNumber, pixelData, offset, etc.
|
||||
// WADO-RS frame number is 1-based
|
||||
for (let frameNumber = 0; frameNumber < numberOfFrames; frameNumber++) {
|
||||
const imageId = getWADORSImageId(instance, frameNumber);
|
||||
|
||||
// TODO Drop dependency on this
|
||||
cornerstoneWADOImageLoader.wadors.metaDataManager.add(
|
||||
imageId,
|
||||
metaData
|
||||
);
|
||||
}
|
||||
});
|
||||
// TODO Drop dependency on this
|
||||
cornerstoneWADOImageLoader.wadors.metaDataManager.add(imageId, metaData);
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
/**
|
||||
* Update metadata manager
|
||||
* @param {Object} study A plain study descriptor object
|
||||
* @param {string} [seriesInstanceUid] The Series Instance UID of the series to be added (Optional)
|
||||
*/
|
||||
export default function updateMetaDataManager(study, seriesInstanceUid) {
|
||||
if (seriesInstanceUid) {
|
||||
const series = study.seriesMap[seriesInstanceUid];
|
||||
updateMetaDataManagerForSeries(study, series);
|
||||
} else {
|
||||
study.seriesList.forEach(series => {
|
||||
updateMetaDataManagerForSeries(study, series);
|
||||
});
|
||||
}
|
||||
}
|
||||
@@ -3,6 +3,17 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.50.5](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.50.4...@ohif/i18n@0.50.5) (2019-10-04)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* CineDialog buttons label ([#998](https://github.com/OHIF/Viewers/issues/998)) ([4df624b](https://github.com/OHIF/Viewers/commit/4df624b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.50.4](https://github.com/OHIF/Viewers/compare/@ohif/i18n@0.50.3...@ohif/i18n@0.50.4) (2019-09-10)
|
||||
|
||||
**Note:** Version bump only for package @ohif/i18n
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/i18n",
|
||||
"version": "0.50.4",
|
||||
"version": "0.50.5",
|
||||
"description": "Internationalization library for The OHIF Viewer",
|
||||
"author": "OHIF",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -1,8 +1,8 @@
|
||||
{
|
||||
"Next image": "$t(Common:Play) $t(Common:Image)",
|
||||
"Next image": "$t(Common:Next) $t(Common:Image)",
|
||||
"Play / Stop": "$t(Common:Play) / $t(Common:Stop)",
|
||||
"Previous image": "$t(Common:Previous) $t(Common:Image)",
|
||||
"Skip to first image": "Skip to first $t(Common:Image)",
|
||||
"Skip to last image": "Skip, to last $t(Common:Image)",
|
||||
"Skip to last image": "Skip to last $t(Common:Image)",
|
||||
"fps": "fps"
|
||||
}
|
||||
@@ -1,5 +1,5 @@
|
||||
{
|
||||
"Next image": " $t(Common:Image) $t(Common:Next)",
|
||||
"Next image": "$t(Common:Image) $t(Common:Next)",
|
||||
"Play / Stop": "$t(Common:Play) / Stop",
|
||||
"Previous image": "$t(Common:Image) $t(Common:Previous)",
|
||||
"Skip to first image": "Ir a la primera $t(Common:Image)",
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
{
|
||||
"Next image": "$t(Common:Play) $t(Common:Image)",
|
||||
"Next image": "$t(Common:Next) $t(Common:Image)",
|
||||
"Play / Stop": "$t(Common:Play) / $t(Common:Stop)",
|
||||
"Previous image": "$t(Common:Previous) $t(Common:Image)",
|
||||
"Skip to first image": "$t(Common:Image)最初にスキップ",
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
{
|
||||
"Next image": "$t(Common:Play) $t(Common:Image)",
|
||||
"Next image": "$t(Common:Next) $t(Common:Image)",
|
||||
"Play / Stop": "$t(Common:Play) / $t(Common:Stop)",
|
||||
"Previous image": "$t(Common:Previous) $t(Common:Image)",
|
||||
"Skip to first image": "Bỏ qua đến đầu $t(Common:Image)",
|
||||
|
||||
@@ -3,6 +3,50 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [0.53.1](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.53.0...@ohif/ui@0.53.1) (2019-10-04)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Move Series Information to Separate Row ([#990](https://github.com/OHIF/Viewers/issues/990)) ([458d310](https://github.com/OHIF/Viewers/commit/458d310))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.53.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.52.0...@ohif/ui@0.53.0) (2019-10-03)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Use QIDO + WADO to load series metadata individually rather than the entire study metadata at once ([#953](https://github.com/OHIF/Viewers/issues/953)) ([9e10c2b](https://github.com/OHIF/Viewers/commit/9e10c2b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [0.52.0](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.51.3...@ohif/ui@0.52.0) (2019-10-01)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 MPR UI improvements. Added MinIP, AvgIP, slab thickness slider and mode toggle ([#947](https://github.com/OHIF/Viewers/issues/947)) ([c79c0c3](https://github.com/OHIF/Viewers/commit/c79c0c3))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.3](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.51.2...@ohif/ui@0.51.3) (2019-10-01)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Address issues with touch devices and drag/drop causing crashes ([#982](https://github.com/OHIF/Viewers/issues/982)) ([cf40a83](https://github.com/OHIF/Viewers/commit/cf40a83))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [0.51.2](https://github.com/OHIF/Viewers/compare/@ohif/ui@0.51.1...@ohif/ui@0.51.2) (2019-09-26)
|
||||
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/ui",
|
||||
"version": "0.51.2",
|
||||
"version": "0.53.1",
|
||||
"description": "A set of React components for Medical Imaging Viewers",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
|
||||
@@ -6,15 +6,29 @@ export class Checkbox extends Component {
|
||||
static propTypes = {
|
||||
label: PropTypes.string.isRequired,
|
||||
checked: PropTypes.bool,
|
||||
onChange: PropTypes.func,
|
||||
};
|
||||
|
||||
constructor(props) {
|
||||
super(props);
|
||||
this.state = { checked: props.checked, label: props.label };
|
||||
this.state = { checked: !!props.checked, label: props.label };
|
||||
}
|
||||
|
||||
handleChange(e) {
|
||||
this.setState({ checked: e.target.checked });
|
||||
const checked = e.target.checked;
|
||||
this.setState({ checked });
|
||||
if (this.props.onChange) this.props.onChange(checked);
|
||||
}
|
||||
|
||||
componentDidUpdate(props) {
|
||||
const { checked = false, label } = props;
|
||||
|
||||
if (this.state.checked !== checked || this.state.label !== label) {
|
||||
this.setState({
|
||||
checked,
|
||||
label,
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
render() {
|
||||
@@ -32,9 +46,7 @@ export class Checkbox extends Component {
|
||||
<input
|
||||
type="checkbox"
|
||||
checked={this.state.checked}
|
||||
onChange={e => {
|
||||
this.handleChange(e);
|
||||
}}
|
||||
onChange={this.handleChange.bind(this)}
|
||||
/>
|
||||
{checkbox}
|
||||
{this.state.label}
|
||||
|
||||
@@ -13,6 +13,7 @@ import {
|
||||
UserPreferencesModal,
|
||||
} from './userPreferencesModal';
|
||||
|
||||
import { Checkbox } from './checkbox';
|
||||
import { CineDialog } from './cineDialog';
|
||||
import { QuickSwitch } from './quickSwitch';
|
||||
import { RoundedButtonGroup } from './roundedButtonGroup';
|
||||
@@ -23,6 +24,7 @@ import { ToolbarSection } from './toolbarSection';
|
||||
import { Tooltip } from './tooltip';
|
||||
|
||||
export {
|
||||
Checkbox,
|
||||
CineDialog,
|
||||
ExampleDropTarget,
|
||||
LayoutButton,
|
||||
|
||||
@@ -1,3 +1,4 @@
|
||||
/* global cornerstone */
|
||||
import './ImageThumbnail.styl';
|
||||
|
||||
import React, { PureComponent } from 'react';
|
||||
@@ -12,25 +13,6 @@ import ViewportLoadingIndicator from '../../viewer/ViewportLoadingIndicator';
|
||||
// - Pass in the entire load and render function as a prop?
|
||||
//import cornerstone from 'cornerstone-core';
|
||||
|
||||
/**
|
||||
* Asynchronous wrapper around Cornerstone's renderToCanvas method.
|
||||
*
|
||||
* @param {HTMLElement} canvasElement An HTML <canvas> element
|
||||
* @param {Image} image A Cornerstone Image
|
||||
*
|
||||
* @return {Promise} A promise tracking the progress of the rendering. Resolves empty.
|
||||
*/
|
||||
function renderAsync(canvasElement, image) {
|
||||
return new Promise((resolve, reject) => {
|
||||
try {
|
||||
cornerstone.renderToCanvas(canvasElement, image);
|
||||
resolve();
|
||||
} catch (error) {
|
||||
reject(error);
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
export default class ImageThumbnail extends PureComponent {
|
||||
static propTypes = {
|
||||
imageSrc: PropTypes.string,
|
||||
@@ -52,40 +34,32 @@ export default class ImageThumbnail extends PureComponent {
|
||||
super(props);
|
||||
|
||||
this.canvas = React.createRef();
|
||||
|
||||
const renderIntoCanvas = this.props.imageId && !this.props.imageSrc;
|
||||
|
||||
this.state = {
|
||||
loading: renderIntoCanvas,
|
||||
loading: this.shouldRenderToCanvas(),
|
||||
};
|
||||
}
|
||||
|
||||
shouldRenderToCanvas() {
|
||||
return this.props.imageId && !this.props.imageSrc;
|
||||
}
|
||||
|
||||
componentDidMount() {
|
||||
const renderIntoCanvas = this.props.imageId && !this.props.imageSrc;
|
||||
|
||||
if (renderIntoCanvas) {
|
||||
const { imageId } = this.props;
|
||||
const canvas = this.canvas.current;
|
||||
|
||||
cornerstone.loadAndCacheImage(imageId).then(
|
||||
image => {
|
||||
renderAsync(canvas, image).then(
|
||||
() => {
|
||||
this.setState({
|
||||
loading: false,
|
||||
});
|
||||
},
|
||||
error => {
|
||||
// TODO: Set state?
|
||||
throw new Error(error);
|
||||
}
|
||||
);
|
||||
},
|
||||
error => {
|
||||
// TODO: Set state?
|
||||
if (this.shouldRenderToCanvas()) {
|
||||
cornerstone
|
||||
.loadAndCacheImage(this.props.imageId)
|
||||
.then(image => {
|
||||
cornerstone.renderToCanvas(this.canvas.current, image);
|
||||
this.setState({
|
||||
loading: false,
|
||||
});
|
||||
})
|
||||
.catch(error => {
|
||||
this.setState({
|
||||
loading: false,
|
||||
error: true,
|
||||
});
|
||||
throw new Error(error);
|
||||
}
|
||||
);
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
@@ -100,12 +74,10 @@ export default class ImageThumbnail extends PureComponent {
|
||||
const showStackLoadingProgressBar =
|
||||
this.props.stackPercentComplete !== undefined;
|
||||
|
||||
const renderIntoCanvas = this.props.imageId && !this.props.imageSrc;
|
||||
|
||||
return (
|
||||
<div className="ImageThumbnail">
|
||||
<div className="image-thumbnail-canvas">
|
||||
{renderIntoCanvas ? (
|
||||
{this.shouldRenderToCanvas() ? (
|
||||
<canvas
|
||||
ref={this.canvas}
|
||||
width={this.props.width}
|
||||
@@ -130,6 +102,9 @@ export default class ImageThumbnail extends PureComponent {
|
||||
/>
|
||||
</div>
|
||||
)}
|
||||
{this.state.loading && (
|
||||
<div className="image-thumbnail-loading-indicator"></div>
|
||||
)}
|
||||
</div>
|
||||
);
|
||||
}
|
||||
|
||||
@@ -26,6 +26,36 @@
|
||||
-webkit-background-clip: padding
|
||||
background-clip: padding-box
|
||||
|
||||
// Thumbnail Loading Indicator
|
||||
|
||||
.image-thumbnail-loading-indicator
|
||||
position: absolute
|
||||
left: 50%
|
||||
top: 50%
|
||||
margin: -22px 0 0 -22px
|
||||
display: block
|
||||
width: 44px
|
||||
height: 44px
|
||||
|
||||
&:after
|
||||
content: " "
|
||||
display: block
|
||||
width: 32px
|
||||
height: 32px
|
||||
margin: 1px
|
||||
border-radius: 50%
|
||||
border: 5px solid var(--ui-border-color-dark)
|
||||
border-color: var(--ui-border-color-dark) transparent var(--ui-border-color-dark) transparent
|
||||
animation: image-thumbnail-loading-indicator 1.2s linear infinite
|
||||
|
||||
@keyframes image-thumbnail-loading-indicator
|
||||
0%
|
||||
transform: rotate(0deg)
|
||||
100%
|
||||
transform: rotate(360deg)
|
||||
|
||||
// The End...
|
||||
|
||||
.image-thumbnail-canvas
|
||||
height: 100%
|
||||
overflow: hidden
|
||||
@@ -36,7 +66,6 @@
|
||||
-webkit-user-drag: none
|
||||
pointer-events: none
|
||||
|
||||
|
||||
.thumbnailLoadingIndicator
|
||||
display: none
|
||||
pointer-events: none
|
||||
|
||||
@@ -25,7 +25,7 @@ class StudyBrowser extends Component {
|
||||
if (this.props.supportsDragAndDrop) {
|
||||
return (
|
||||
<ThumbnailEntryDragSource
|
||||
key={`${studyIndex}_${thumbIndex}`}
|
||||
key={thumb.displaySetInstanceUid}
|
||||
{...study}
|
||||
{...thumb}
|
||||
id={`${studyIndex}_${thumbIndex}`}
|
||||
@@ -37,7 +37,7 @@ class StudyBrowser extends Component {
|
||||
return (
|
||||
<div className="ThumbnailEntryContainer">
|
||||
<ThumbnailEntry
|
||||
key={`${studyIndex}_${thumbIndex}`}
|
||||
key={thumb.displaySetInstanceUid}
|
||||
{...study}
|
||||
{...thumb}
|
||||
id={`${studyIndex}_${thumbIndex}`}
|
||||
|
||||
@@ -38,7 +38,6 @@ class ThumbnailEntry extends Component {
|
||||
let className = classnames('ThumbnailEntry noselect', {
|
||||
active: this.props.active,
|
||||
});
|
||||
const infoOnly = false;
|
||||
|
||||
let contents = null;
|
||||
if (this.props.imageSrc || this.props.imageId) {
|
||||
@@ -54,8 +53,10 @@ class ThumbnailEntry extends Component {
|
||||
);
|
||||
} else if (this.props.altImageText) {
|
||||
contents = (
|
||||
<div className={'alt-image-text p-x-1'}>
|
||||
<h1>{this.props.altImageText}</h1>
|
||||
<div className="p-x-1">
|
||||
<div className="alt-image-text">
|
||||
<h1>{this.props.altImageText}</h1>
|
||||
</div>
|
||||
</div>
|
||||
);
|
||||
}
|
||||
@@ -69,23 +70,23 @@ class ThumbnailEntry extends Component {
|
||||
>
|
||||
{contents}
|
||||
<div
|
||||
className={infoOnly ? 'series-details info-only' : 'series-details'}
|
||||
className="series-details"
|
||||
>
|
||||
<div className="series-description">
|
||||
{this.props.seriesDescription}
|
||||
</div>
|
||||
<div className="series-information">
|
||||
<div className="item item-series clearfix">
|
||||
<div className="item item-series">
|
||||
<div className="icon">S:</div>
|
||||
<div className="value">{this.props.seriesNumber}</div>
|
||||
</div>
|
||||
{hasInstanceNumber && (
|
||||
<div className="item item-series clearfix">
|
||||
<div className="item item-series">
|
||||
<div className="icon">I:</div>
|
||||
<div className="value">{this.props.instanceNumber}</div>
|
||||
</div>
|
||||
)}
|
||||
<div className="item item-frames clearfix">
|
||||
<div className="item item-frames">
|
||||
<div className="icon">
|
||||
<div />
|
||||
</div>
|
||||
|
||||
@@ -31,8 +31,6 @@
|
||||
color: var(--text-primary-color);
|
||||
|
||||
.series-details
|
||||
display: flex;
|
||||
flex-direction: row;
|
||||
color: var(--text-primary-color);
|
||||
font-size: 14px
|
||||
line-height: 1.3em
|
||||
@@ -44,9 +42,6 @@
|
||||
position: relative
|
||||
word-wrap: break-word
|
||||
|
||||
.series-description
|
||||
flex-grow: 1
|
||||
|
||||
&.info-only
|
||||
.series-description
|
||||
display: none
|
||||
@@ -67,36 +62,33 @@
|
||||
float: none
|
||||
line-height: 25px
|
||||
|
||||
.value
|
||||
margin-left: 0
|
||||
width: auto
|
||||
|
||||
.series-information
|
||||
padding-right: 4px
|
||||
max-width: 50px
|
||||
display: flex
|
||||
flex-direction: row
|
||||
align-items: center
|
||||
|
||||
.item
|
||||
flex: 1
|
||||
text-align: center
|
||||
|
||||
.item-frames .icon
|
||||
height: 18px
|
||||
|
||||
.value
|
||||
color: var(--text-secondary-color);
|
||||
display: inline-block
|
||||
float: right
|
||||
display: inline
|
||||
font-size: 12px
|
||||
margin-left: 4px
|
||||
overflow: hidden
|
||||
text-overflow: ellipsis
|
||||
white-space: nowrap
|
||||
width: calc(100% - 15px)
|
||||
|
||||
.icon
|
||||
color: var(--active-color);
|
||||
display: inline-block
|
||||
float: left
|
||||
display: inline
|
||||
font-size: 10px
|
||||
font-weight: 900
|
||||
text-align: right
|
||||
width: 11px
|
||||
|
||||
div
|
||||
background-color: var(--series-count-background-color);
|
||||
|
||||
@@ -2,6 +2,7 @@
|
||||
margin: 0;
|
||||
width: 100%;
|
||||
-webkit-appearance: none;
|
||||
background-color: transparent;
|
||||
}
|
||||
|
||||
.range:focus {
|
||||
|
||||
@@ -11,7 +11,7 @@ class Range extends React.Component {
|
||||
|
||||
handleChange = event => {
|
||||
this.setState({ value: event.target.value });
|
||||
if (this.props.onChange) this.props.onChange();
|
||||
if (this.props.onChange) this.props.onChange(event);
|
||||
};
|
||||
|
||||
render() {
|
||||
@@ -21,6 +21,7 @@ class Range extends React.Component {
|
||||
value={this.state.value}
|
||||
min={this.props.min}
|
||||
max={this.props.max}
|
||||
step={this.props.step || 1}
|
||||
onChange={this.handleChange}
|
||||
id={this.props.id}
|
||||
className="range"
|
||||
|
||||
@@ -34,10 +34,6 @@
|
||||
}
|
||||
|
||||
.select-ohif:focus {
|
||||
border-color: #aaa;
|
||||
box-shadow: 0 0 1px 3px rgba(59, 153, 252, 0.7);
|
||||
box-shadow: 0 0 0 3px -moz-mac-focusring;
|
||||
color: #222;
|
||||
outline: none;
|
||||
}
|
||||
|
||||
|
||||
@@ -11,8 +11,9 @@ class Select extends Component {
|
||||
}
|
||||
|
||||
handleChange = event => {
|
||||
this.setState({ value: event.target.value });
|
||||
if (this.props.onChange) this.props.onChange();
|
||||
const value = event.target.value;
|
||||
this.setState({ value });
|
||||
if (this.props.onChange) this.props.onChange(value);
|
||||
};
|
||||
|
||||
render() {
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
import {
|
||||
Checkbox,
|
||||
CineDialog,
|
||||
ExampleDropTarget,
|
||||
LayoutButton,
|
||||
@@ -25,7 +26,7 @@ import {
|
||||
import { ICONS, Icon } from './elements';
|
||||
|
||||
// Alias this for now as not all dependents are using strict versioning
|
||||
import { DropdownMenu as Dropdown } from './elements/form';
|
||||
import { DropdownMenu as Dropdown, Range, Select } from './elements/form';
|
||||
import ExpandableToolMenu from './viewer/ExpandableToolMenu.js';
|
||||
import LayoutManager from './LayoutChooser/LayoutManager.js';
|
||||
import LayoutPanelDropTarget from './LayoutChooser/LayoutPanelDropTarget.js';
|
||||
@@ -38,6 +39,7 @@ import ViewerbaseDragDropContext from './utils/viewerbaseDragDropContext.js';
|
||||
export {
|
||||
ICONS,
|
||||
//
|
||||
Checkbox,
|
||||
CineDialog,
|
||||
Dropdown,
|
||||
ExpandableToolMenu,
|
||||
@@ -53,8 +55,10 @@ export {
|
||||
OverlayTrigger,
|
||||
PlayClipButton,
|
||||
QuickSwitch,
|
||||
Range,
|
||||
RoundedButtonGroup,
|
||||
ScrollableArea,
|
||||
Select,
|
||||
SelectTree,
|
||||
SimpleDialog,
|
||||
StudyBrowser,
|
||||
|
||||
@@ -10,10 +10,11 @@ const isTouchDevice = !!('ontouchstart' in window || navigator.maxTouchPoints);
|
||||
//
|
||||
// http://react-dnd.github.io/react-dnd/docs/api/drag-drop-context
|
||||
export default function viewerbaseDragDropContext(DecoratedClass) {
|
||||
const backend = isTouchDevice ? TouchBackend({ enableMouseEvents: true }) : HTML5Backend;
|
||||
const backend = isTouchDevice ? TouchBackend : HTML5Backend;
|
||||
const opts = isTouchDevice ? { enableMouseEvents: true } : {};
|
||||
|
||||
return (props) => (
|
||||
<DndProvider backend={backend}>
|
||||
<DndProvider backend={backend} opts={opts}>
|
||||
<DecoratedClass {...props}/>
|
||||
</DndProvider>
|
||||
);
|
||||
|
||||
@@ -108,16 +108,8 @@ class ExpandableToolMenu extends React.Component {
|
||||
};
|
||||
|
||||
render() {
|
||||
return (
|
||||
<OverlayTrigger
|
||||
key="menu-button"
|
||||
trigger="click"
|
||||
placement="bottom"
|
||||
rootClose={true}
|
||||
handleHide={this.onOverlayHide}
|
||||
onClick={this.onExpandableToolClick}
|
||||
overlay={this.toolbarMenuOverlay()}
|
||||
>
|
||||
const getToolBarButtonComponent = () => {
|
||||
return (
|
||||
<ToolbarButton
|
||||
key="menu-button"
|
||||
type="tool"
|
||||
@@ -128,6 +120,22 @@ class ExpandableToolMenu extends React.Component {
|
||||
isExpandable={true}
|
||||
isExpanded={this.state.isExpanded}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
const toolbarComponent = getToolBarButtonComponent();
|
||||
|
||||
return (
|
||||
<OverlayTrigger
|
||||
key="menu-button"
|
||||
trigger="click"
|
||||
placement="bottom"
|
||||
rootClose={true}
|
||||
handleHide={this.onOverlayHide}
|
||||
onClick={this.onExpandableToolClick}
|
||||
overlay={this.toolbarMenuOverlay()}
|
||||
>
|
||||
{toolbarComponent}
|
||||
</OverlayTrigger>
|
||||
);
|
||||
}
|
||||
|
||||
@@ -114,6 +114,8 @@ module.exports = (env, argv) => {
|
||||
hot: true,
|
||||
open: true,
|
||||
port: 3000,
|
||||
host: '0.0.0.0',
|
||||
public: 'http://localhost:' + 3000,
|
||||
historyApiFallback: {
|
||||
disableDotRule: true,
|
||||
},
|
||||
|
||||
@@ -3,6 +3,111 @@
|
||||
All notable changes to this project will be documented in this file.
|
||||
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
|
||||
|
||||
## [1.4.5](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.4.4...@ohif/viewer@1.4.5) (2019-10-09)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.4.4](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.4.3...@ohif/viewer@1.4.4) (2019-10-07)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.4.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.4.2...@ohif/viewer@1.4.3) (2019-10-04)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.4.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.4.1...@ohif/viewer@1.4.2) (2019-10-04)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.4.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.4.0...@ohif/viewer@1.4.1) (2019-10-03)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.4.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.3.3...@ohif/viewer@1.4.0) (2019-10-03)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* Use QIDO + WADO to load series metadata individually rather than the entire study metadata at once ([#953](https://github.com/OHIF/Viewers/issues/953)) ([9e10c2b](https://github.com/OHIF/Viewers/commit/9e10c2b))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.3.2...@ohif/viewer@1.3.3) (2019-10-02)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.2](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.3.1...@ohif/viewer@1.3.2) (2019-10-01)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.3.1](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.3.0...@ohif/viewer@1.3.1) (2019-10-01)
|
||||
|
||||
|
||||
### Bug Fixes
|
||||
|
||||
* Exit MPR mode if Layout is changed ([#984](https://github.com/OHIF/Viewers/issues/984)) ([674ca9f](https://github.com/OHIF/Viewers/commit/674ca9f))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# [1.3.0](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.2.8...@ohif/viewer@1.3.0) (2019-10-01)
|
||||
|
||||
|
||||
### Features
|
||||
|
||||
* 🎸 MPR UI improvements. Added MinIP, AvgIP, slab thickness slider and mode toggle ([#947](https://github.com/OHIF/Viewers/issues/947)) ([c79c0c3](https://github.com/OHIF/Viewers/commit/c79c0c3))
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.8](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.2.7...@ohif/viewer@1.2.8) (2019-10-01)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.7](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.2.6...@ohif/viewer@1.2.7) (2019-10-01)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
## [1.2.6](https://github.com/OHIF/Viewers/compare/@ohif/viewer@1.2.5...@ohif/viewer@1.2.6) (2019-09-27)
|
||||
|
||||
**Note:** Version bump only for package @ohif/viewer
|
||||
|
||||
@@ -0,0 +1,407 @@
|
||||
describe('OHIF Cornerstone Toolbar', () => {
|
||||
|
||||
before(() => {
|
||||
cy.openStudy("MISTER^MR");
|
||||
cy.waitDicomImage();
|
||||
});
|
||||
|
||||
beforeEach(() => {
|
||||
//Creating aliases for Cornerstone tools buttons
|
||||
cy.get('.toolbar-button:nth-child(2)').as('stackScrollBtn');
|
||||
cy.get('.toolbar-button:nth-child(3)').as('zoomBtn');
|
||||
cy.get('.toolbar-button:nth-child(4)').as('levelsBtn');
|
||||
cy.get('.toolbar-button:nth-child(5)').as('panBtn');
|
||||
cy.get('.toolbar-button:nth-child(6)').as('lengthBtn');
|
||||
cy.get('.toolbar-button:nth-child(7)').as('annotateBtn');
|
||||
cy.get('.toolbar-button:nth-child(8)').as('angleBtn');
|
||||
cy.get('.toolbar-button:nth-child(9)').as('resetBtn');
|
||||
cy.get('.toolbar-button:nth-child(10)').as('cineBtn');
|
||||
cy.get('.expandableToolMenu').as('moreBtn');
|
||||
cy.get('.PluginSwitch > .toolbar-button').as('twodmprBtn');
|
||||
cy.get('.btn-group > .toolbar-button').as('layoutBtn');
|
||||
cy.get('.pull-right > .RoundedButtonGroup > .roundedButtonWrapper > .roundedButton').as('measurementsBtn');
|
||||
cy.get('.viewport-element').as('viewport');
|
||||
cy.get('section.sidepanel.from-right').as('measurementsPanel')
|
||||
//Following best practices, reset should be done before each test
|
||||
cy.resetViewport();
|
||||
})
|
||||
|
||||
|
||||
it('checks if all primary buttons are being displayed', () => {
|
||||
cy.get('@stackScrollBtn').should('be.visible').contains('Stack Scroll');
|
||||
cy.get('@zoomBtn').should('be.visible').contains('Zoom');
|
||||
cy.get('@levelsBtn').should('be.visible').contains('Levels');
|
||||
cy.get('@panBtn').should('be.visible').contains('Pan');
|
||||
cy.get('@lengthBtn').should('be.visible').contains('Length');
|
||||
cy.get('@annotateBtn').should('be.visible').contains('Annotate');
|
||||
cy.get('@angleBtn').should('be.visible').contains('Angle');
|
||||
cy.get('@resetBtn').should('be.visible').contains('Reset');
|
||||
cy.get('@cineBtn').should('be.visible').contains('CINE');
|
||||
cy.get('@moreBtn').should('be.visible').contains('More');
|
||||
cy.get('@twodmprBtn').should('be.visible').contains('2D MPR');
|
||||
cy.get('@layoutBtn').should('be.visible').contains('Layout');
|
||||
});
|
||||
|
||||
|
||||
it('checks if Stack Scroll tool will navigate across all series in the viewport', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@stackScrollBtn')
|
||||
.click()
|
||||
.then(($stackScrollBtn) =>{
|
||||
cy.wrap($stackScrollBtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//drags the mouse inside the viewport to be able to interact with series
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'top', { which: 1 })
|
||||
.trigger('mousemove', 'center', { which: 1 })
|
||||
.trigger('mouseup');
|
||||
|
||||
const overlaySeriesInformation = 'div.ViewportOverlay > div.bottom-left.overlay-element > div';
|
||||
const expectedText = 'Ser: 1Img: 14 14/26256 x 256Loc: 0.00 mm Thick: 5.00 mm';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('have.text', expectedText);
|
||||
});
|
||||
|
||||
|
||||
it('checks if Zoom tool will zoom in/out an image in the viewport', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@zoomBtn')
|
||||
.click()
|
||||
.then(($zoomBtn) =>{
|
||||
cy.wrap($zoomBtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//drags the mouse inside the viewport to be able to interact with series
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'top', { which: 1 })
|
||||
.trigger('mousemove', 'center', { which: 1 })
|
||||
.trigger('mouseup');
|
||||
|
||||
const overlaySeriesInformation = 'div.ViewportOverlay > div.bottom-right.overlay-element > div';
|
||||
const expectedText = 'Zoom: 884%W: 820 L: 410Lossless / Uncompressed';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('have.text', expectedText);
|
||||
});
|
||||
|
||||
|
||||
it('checks if Levels tool will change the contrast and brightness of an image in the viewport', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@levelsBtn')
|
||||
.click()
|
||||
.then(($levelsBtn) =>{
|
||||
cy.wrap($levelsBtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//drags the mouse inside the viewport to be able to interact with series
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'top', { which: 1 })
|
||||
.trigger('mousemove', 'center', { which: 1 })
|
||||
.trigger('mouseup')
|
||||
.trigger('mousedown', 'center', { which: 1 })
|
||||
.trigger('mousemove', 'left', { which: 1 })
|
||||
.trigger('mouseup');
|
||||
|
||||
const overlaySeriesInformation = 'div.ViewportOverlay > div.bottom-right.overlay-element > div';
|
||||
const expectedText = 'Zoom: 211%W: 544 L: 626Lossless / Uncompressed';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('have.text', expectedText);
|
||||
});
|
||||
|
||||
|
||||
it('checks if Pan tool will move the image inside the viewport', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@panBtn')
|
||||
.click()
|
||||
.then(($panBtn) =>{
|
||||
cy.wrap($panBtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//Get image position from cornerstone and check if y axis was modified
|
||||
let cornerstone;
|
||||
let currentPan;
|
||||
|
||||
cy.window()
|
||||
.its('cornerstone')
|
||||
.then((c) => {
|
||||
cornerstone = c;
|
||||
currentPan = () => cornerstone.getEnabledElements()[0].viewport.translation;
|
||||
});
|
||||
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'center', { which: 1 })
|
||||
.trigger('mousemove', 'bottom', { which: 1 })
|
||||
.trigger('mouseup', 'bottom')
|
||||
.then(() => {
|
||||
expect(currentPan().y > 0).to.eq(true);
|
||||
});
|
||||
});
|
||||
|
||||
|
||||
it('checks if Length annotation can be added on viewport and on measurements panel', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@lengthBtn')
|
||||
.click()
|
||||
.then(($lengthbtn) =>{
|
||||
cy.wrap($lengthbtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//Add annotation on the viewport
|
||||
const firstClick = [150, 100];
|
||||
const secondClick = [130, 170];
|
||||
cy.addLine('.cornerstone-canvas', firstClick, secondClick)
|
||||
|
||||
//Verify if measurement annotation was added into the measurements panel
|
||||
cy.get('@measurementsBtn')
|
||||
.click()
|
||||
.then($measurementsBtn => {
|
||||
cy.get('@measurementsPanel')
|
||||
.should('be.visible');
|
||||
|
||||
cy.get('.measurementItem')
|
||||
.its('length')
|
||||
.should('be.eq', 1);
|
||||
|
||||
cy.wrap($measurementsBtn)
|
||||
.click();
|
||||
})
|
||||
});
|
||||
|
||||
|
||||
it('checks if Angle annotation can be added on viewport and on measurements panel', () => {
|
||||
//Click on button and vefiry if icon is active on toolbar
|
||||
cy.get('@angleBtn')
|
||||
.click()
|
||||
.then(($angleBtn) =>{
|
||||
cy.wrap($angleBtn)
|
||||
.should('have.class', 'active')
|
||||
})
|
||||
|
||||
//Add annotation on the viewport
|
||||
const initPos = [180, 390];
|
||||
const midPos = [300, 410];
|
||||
const finalPos = [180, 450];
|
||||
cy.addAngle('.cornerstone-canvas', initPos, midPos, finalPos);
|
||||
|
||||
//Verify if measurement annotation was added into the measurements panel
|
||||
cy.get('@measurementsBtn')
|
||||
.click()
|
||||
.then($measurementsBtn => {
|
||||
cy.get('@measurementsPanel')
|
||||
.should('be.visible');
|
||||
|
||||
cy.get('.measurementItem')
|
||||
.its('length')
|
||||
.should('be.eq', 2);
|
||||
|
||||
cy.wrap($measurementsBtn)
|
||||
.click();
|
||||
})
|
||||
});
|
||||
|
||||
|
||||
it('checks if Reset tool will reset all changes made on the image', () => {
|
||||
//Make some changes by zooming in and rotating the image
|
||||
cy.imageZoomIn();
|
||||
cy.imageContrast();
|
||||
|
||||
//Click on reset button
|
||||
cy.get('@resetBtn').click()
|
||||
|
||||
const overlaySeriesInformation = 'div.ViewportOverlay > div.bottom-right.overlay-element > div';
|
||||
const expectedText = 'Zoom: 211%W: 820 L: 410Lossless / Uncompressed';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('have.text', expectedText);
|
||||
});
|
||||
|
||||
|
||||
it('checks if CINE tool will prompt a modal with working controls', () => {
|
||||
//Click on button
|
||||
cy.get('@cineBtn')
|
||||
.click();
|
||||
//Vefiry if cine control overlay is being displayed
|
||||
cy.get('.cine-controls').as('cineControls')
|
||||
.should('be.visible');
|
||||
|
||||
//Test PLAY button
|
||||
cy.get('[title="Play / Stop"]')
|
||||
.click()
|
||||
.wait(100)
|
||||
.click();
|
||||
|
||||
const overlaySeriesInformation = 'div.ViewportOverlay > div.bottom-left.overlay-element > div';
|
||||
let expectedText = 'Img: 1 1/26';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('not.have.text', expectedText);
|
||||
|
||||
//Test SKIP TO FIRST IMAGE button
|
||||
cy.get('[title="Skip to first Image"]')
|
||||
.click()
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('contain.text', expectedText);
|
||||
|
||||
//Test NEXT IMAGE button
|
||||
cy.get('[title="Next Image"]') //Title is wrong and was reported on bug #995: https://github.com/OHIF/Viewers/issues/995
|
||||
.click()
|
||||
expectedText = 'Img: 2 2/26';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('contain.text', expectedText);
|
||||
|
||||
//Test SKIP TO LAST IMAGE button
|
||||
cy.get('[title="Skip to last Image"]') //Title is wrong and was reported on bug #995: https://github.com/OHIF/Viewers/issues/995
|
||||
.click()
|
||||
expectedText = 'Img: 27 26/26';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('contain.text', expectedText);
|
||||
|
||||
//Test PREVIOUS IMAGE button
|
||||
cy.get('[title="Previous Image"]')
|
||||
.click()
|
||||
expectedText = 'Img: 26 25/26';
|
||||
cy.get(overlaySeriesInformation)
|
||||
.should('contain.text', expectedText);
|
||||
|
||||
//Click on Cine button
|
||||
cy.get('@cineBtn')
|
||||
.click();
|
||||
//Vefiry if cine control overlay is hidden
|
||||
cy.get('@cineControls')
|
||||
.should('not.be.visible');
|
||||
});
|
||||
|
||||
|
||||
it('checks if More button will prompt a modal with secondary tools', () => {
|
||||
cy.get('@moreBtn')
|
||||
.click();
|
||||
//Verify if overlay is displayed
|
||||
cy.get('.tooltip-toolbar-overlay').as('toolbarOverlay')
|
||||
.should('be.visible');
|
||||
|
||||
let iconName;
|
||||
//Click on one of the secondary tools from the overlay
|
||||
cy.get('.tooltip-inner > :nth-child(1)')
|
||||
.click()
|
||||
.then(($magnifyBtn) =>{
|
||||
cy.wrap($magnifyBtn)
|
||||
.should('have.class', 'active')
|
||||
.find('svg').then(($icon)=>{
|
||||
iconName = $icon.text();
|
||||
})
|
||||
})
|
||||
|
||||
//Check if More button is active and if it has same icon as the secondary tool selected
|
||||
cy.get('@moreBtn')
|
||||
.click()
|
||||
.then(($moreBtn) =>{
|
||||
cy.wrap($moreBtn)
|
||||
.should('have.class', 'active')
|
||||
.contains(iconName);
|
||||
})
|
||||
|
||||
//Verify if overlay is hidden
|
||||
cy.get('@toolbarOverlay')
|
||||
.should('not.be.visible');
|
||||
});
|
||||
|
||||
|
||||
it('checks if Layout tool will multiply the number of viewports displayed', () => {
|
||||
//Click on Layout button and verify if overlay is displayed
|
||||
cy.get('@layoutBtn')
|
||||
.click()
|
||||
.then(() => {
|
||||
cy.get('.layoutChooser').as('layoutChooser')
|
||||
.should('be.visible')
|
||||
.find('td')
|
||||
.its('length')
|
||||
.should('be.eq', 9);
|
||||
})
|
||||
|
||||
//verify if layout has changed to 2 viewports
|
||||
cy.get('tbody > :nth-child(1) > :nth-child(2)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 2);
|
||||
})
|
||||
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(2) > :nth-child(1)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 2);
|
||||
})
|
||||
|
||||
//verify if layout has changed to 3 viewports
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(1) > :nth-child(3)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wait(1000);
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 3);
|
||||
})
|
||||
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(3) > :nth-child(1)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 3);
|
||||
})
|
||||
|
||||
//verify if layout has changed to 4 viewports
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(2) > :nth-child(2)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 4);
|
||||
})
|
||||
|
||||
//verify if layout has changed to 6 viewports
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(2) > :nth-child(3)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 6);
|
||||
})
|
||||
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(3) > :nth-child(2)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 6);
|
||||
})
|
||||
|
||||
//verify if layout has changed to 9 viewports
|
||||
cy.get('@layoutBtn').click();
|
||||
cy.get('tbody > :nth-child(3) > :nth-child(3)').click();
|
||||
cy.get('.viewport-container').then(($viewport) =>{
|
||||
cy.wrap($viewport)
|
||||
.its('length')
|
||||
.should('be.eq', 9);
|
||||
})
|
||||
|
||||
//Commented this to avoid throwing an wrong exception at the end of "Layout button" test
|
||||
//this commented section should be uncommented once issue #999 is fixed. (https://github.com/OHIF/Viewers/issues/999)
|
||||
|
||||
//verify if layout has changed to 1 viewport
|
||||
// cy.get('@layoutBtn').click();
|
||||
// cy.get('tbody > :nth-child(1) > :nth-child(1)').click();
|
||||
// cy.get('.viewport-container').then(($viewport) =>{
|
||||
// cy.wrap($viewport)
|
||||
// .its('length')
|
||||
// .should('be.eq', 1);
|
||||
// })
|
||||
|
||||
});
|
||||
|
||||
});
|
||||
@@ -1,5 +1,4 @@
|
||||
/*
|
||||
TODO: Temporarily commented out because it is failing on CI due to timing issues
|
||||
|
||||
describe('OHIF Study Viewer Page', () => {
|
||||
|
||||
before(() => {
|
||||
@@ -41,10 +40,8 @@ describe('OHIF Study Viewer Page', () => {
|
||||
cy.get(measurementsButton).click();
|
||||
cy.get(rightPanel).should('be.visible');
|
||||
|
||||
|
||||
cy.get(measurementsButton).click();
|
||||
cy.get(rightPanel).should('not.be.enabled');
|
||||
});
|
||||
|
||||
});
|
||||
*/
|
||||
@@ -1,4 +1,6 @@
|
||||
import { DragSimulator } from "../helpers/DragSimulator.js";
|
||||
import { doesNotReject } from "assert";
|
||||
import { disconnect } from "cluster";
|
||||
|
||||
// ***********************************************
|
||||
// This example commands.js shows you how to
|
||||
@@ -30,12 +32,114 @@ Cypress.Commands.add('openStudy', (patientName) => {
|
||||
cy.visit('/');
|
||||
cy.get('#patientName')
|
||||
.type(patientName);
|
||||
cy.get('.studylistStudy > .patientName')
|
||||
.contains(patientName)
|
||||
.click();
|
||||
|
||||
cy.get('.studylistStudy > .patientName').as('patientResult')
|
||||
.then({ timeout: 5000 }, ($patientResult) => {
|
||||
cy.contains(patientName)
|
||||
.click();
|
||||
})
|
||||
}
|
||||
);
|
||||
|
||||
Cypress.Commands.add('drag', {prevSubject: 'element',},
|
||||
(...args) => DragSimulator.simulate(...args)
|
||||
);
|
||||
|
||||
/**
|
||||
* Command to perform two clicks into two different positions. Each position must be [x, y].
|
||||
* The positions are considering the element as reference, therefore, top-left of the element will be (0, 0).
|
||||
*
|
||||
* @param {*} viewport - Selector for viewport we would like to interact with
|
||||
* @param {number[]} firstClick - Click position [x, y]
|
||||
* @param {number[]} secondClick - Click position [x, y]
|
||||
*/
|
||||
Cypress.Commands.add('addLine', (viewport, firstClick, secondClick) => {
|
||||
|
||||
cy.get(viewport).then(($viewport) => {
|
||||
const [ x1, y1 ] = firstClick;
|
||||
const [ x2, y2 ] = secondClick;
|
||||
|
||||
cy.wrap($viewport)
|
||||
.click(x1, y1, {force: true})
|
||||
.trigger('mousemove', {clientX:x2, clientY:y2})
|
||||
.click(x2, y2, {force: true})
|
||||
});
|
||||
});
|
||||
|
||||
|
||||
/**
|
||||
* Command to perform three clicks into three different positions. Each position must be [x, y].
|
||||
* The positions are considering the element as reference, therefore, top-left of the element will be (0, 0).
|
||||
*
|
||||
* @param {*} viewport - Selector for viewport we would like to interact with
|
||||
* @param {number[]} firstClick - Click position [x, y]
|
||||
* @param {number[]} secondClick - Click position [x, y]
|
||||
* @param {number[]} thirdClick - Click position [x, y]
|
||||
*/
|
||||
Cypress.Commands.add('addAngle', (viewport, firstClick, secondClick, thirdClick) => {
|
||||
|
||||
cy.get(viewport).then(($viewport) => {
|
||||
const [ x1, y1 ] = firstClick;
|
||||
const [ x2, y2 ] = secondClick;
|
||||
const [ x3, y3 ] = thirdClick;
|
||||
|
||||
cy.wrap($viewport)
|
||||
.click(x1, y1, {force: true})
|
||||
.trigger('mousemove', {clientX:x2, clientY:y2})
|
||||
.click(x2, y2, {force: true})
|
||||
.trigger('mousemove', {clientX:x3, clientY:y3})
|
||||
.click(x3, y3, {force: true})
|
||||
});
|
||||
});
|
||||
|
||||
|
||||
//Command to wait DICOM image to load into the viewport
|
||||
Cypress.Commands.add('waitDicomImage', (timeout = 10000) => {
|
||||
cy.window()
|
||||
.its('cornerstone')
|
||||
.then($cornerstone => {
|
||||
return new Cypress.Promise(resolve => {
|
||||
const onEvent = (renderedEvt) => {
|
||||
const element = renderedEvt.detail.element;
|
||||
|
||||
element.removeEventListener('cornerstoneimagerendered', onEvent);
|
||||
$cornerstone.events.removeEventListener('cornerstoneimagerendered', onEvent);
|
||||
resolve();
|
||||
}
|
||||
const onEnabled = (enabledEvt) => {
|
||||
const element = enabledEvt.detail.element;
|
||||
|
||||
element.addEventListener('cornerstoneimagerendered', onEvent);
|
||||
}
|
||||
$cornerstone.events.addEventListener('cornerstoneelementenabled', onEnabled);
|
||||
});
|
||||
});
|
||||
|
||||
});
|
||||
|
||||
|
||||
//Command to reset the viewport changes throught the cornerstone method
|
||||
Cypress.Commands.add('resetViewport', () => {
|
||||
cy.get('@resetBtn').click()
|
||||
});
|
||||
|
||||
|
||||
Cypress.Commands.add('imageZoomIn', () => {
|
||||
cy.get('@zoomBtn').click();
|
||||
|
||||
//drags the mouse inside the viewport to be able to interact with series
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'top', { which: 1 })
|
||||
.trigger('mousemove', 'center', { which: 1 })
|
||||
.trigger('mouseup');
|
||||
});
|
||||
|
||||
Cypress.Commands.add('imageContrast', () => {
|
||||
cy.get('@levelsBtn').click();
|
||||
|
||||
//drags the mouse inside the viewport to be able to interact with series
|
||||
cy.get('@viewport')
|
||||
.trigger('mousedown', 'center', { which: 1 })
|
||||
.trigger('mousemove', 'top', { which: 1 })
|
||||
.trigger('mouseup');
|
||||
});
|
||||
@@ -1,6 +1,6 @@
|
||||
{
|
||||
"name": "@ohif/viewer",
|
||||
"version": "1.2.6",
|
||||
"version": "1.4.5",
|
||||
"description": "OHIF Viewer",
|
||||
"author": "OHIF Contributors",
|
||||
"license": "MIT",
|
||||
@@ -46,14 +46,14 @@
|
||||
},
|
||||
"dependencies": {
|
||||
"@babel/runtime": "^7.5.5",
|
||||
"@ohif/core": "^1.0.1",
|
||||
"@ohif/core": "^1.2.0",
|
||||
"@ohif/extension-cornerstone": "^2.0.0",
|
||||
"@ohif/extension-dicom-html": "^1.0.0",
|
||||
"@ohif/extension-dicom-microscopy": "^0.50.6",
|
||||
"@ohif/extension-dicom-pdf": "^1.0.0",
|
||||
"@ohif/extension-vtk": "^0.50.22",
|
||||
"@ohif/i18n": "^0.50.4",
|
||||
"@ohif/ui": "^0.51.2",
|
||||
"@ohif/extension-vtk": "^0.52.2",
|
||||
"@ohif/i18n": "^0.50.5",
|
||||
"@ohif/ui": "^0.53.1",
|
||||
"@tanem/react-nprogress": "^1.1.25",
|
||||
"classnames": "^2.2.6",
|
||||
"core-js": "^3.2.1",
|
||||
|
||||
@@ -13,6 +13,7 @@ window.config = {
|
||||
qidoSupportsIncludeField: true,
|
||||
imageRendering: 'wadors',
|
||||
thumbnailRendering: 'wadors',
|
||||
enableStudyLazyLoad: true,
|
||||
},
|
||||
],
|
||||
},
|
||||
|
||||
@@ -12,6 +12,7 @@ window.config = {
|
||||
qidoSupportsIncludeField: true,
|
||||
imageRendering: 'wadors',
|
||||
thumbnailRendering: 'wadors',
|
||||
enableStudyLazyLoad: true,
|
||||
},
|
||||
],
|
||||
},
|
||||
|
||||
@@ -11,6 +11,7 @@ window.config = {
|
||||
qidoSupportsIncludeField: true,
|
||||
imageRendering: 'wadors',
|
||||
thumbnailRendering: 'wadors',
|
||||
enableStudyLazyLoad: true,
|
||||
},
|
||||
],
|
||||
},
|
||||
|
||||
@@ -13,15 +13,23 @@ const mapStateToProps = state => {
|
||||
const mapDispatchToProps = dispatch => {
|
||||
return {
|
||||
// TODO: Change if layout switched becomes more complex
|
||||
onChange: selectedCell => {
|
||||
onChange: (selectedCell, currentLayout) => {
|
||||
let viewports = [];
|
||||
const rows = selectedCell.row + 1;
|
||||
const columns = selectedCell.col + 1;
|
||||
const numViewports = rows * columns;
|
||||
for (let i = 0; i < numViewports; i++) {
|
||||
// Hacky way to allow users to exit MPR "mode"
|
||||
const viewport = currentLayout.viewports[i];
|
||||
let plugin = viewport && viewport.plugin;
|
||||
if (viewport && viewport.vtk) {
|
||||
plugin = 'cornerstone';
|
||||
}
|
||||
|
||||
viewports.push({
|
||||
height: `${100 / rows}%`,
|
||||
width: `${100 / columns}%`,
|
||||
plugin,
|
||||
});
|
||||
}
|
||||
const layout = {
|
||||
@@ -33,9 +41,19 @@ const mapDispatchToProps = dispatch => {
|
||||
};
|
||||
};
|
||||
|
||||
const mergeProps = (propsFromState, propsFromDispatch) => {
|
||||
const onChangeFromDispatch = propsFromDispatch.onChange;
|
||||
const { currentLayout } = propsFromState;
|
||||
|
||||
return {
|
||||
onChange: (selectedCell) => onChangeFromDispatch(selectedCell, currentLayout)
|
||||
};
|
||||
}
|
||||
|
||||
const ConnectedLayoutButton = connect(
|
||||
mapStateToProps,
|
||||
mapDispatchToProps
|
||||
mapDispatchToProps,
|
||||
mergeProps
|
||||
)(LayoutButton);
|
||||
|
||||
export default ConnectedLayoutButton;
|
||||
@@ -229,6 +229,7 @@ function _getButtonComponents(toolbarButtons, activeButtons) {
|
||||
});
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* A handy way for us to handle different button types. IE. firing commands for
|
||||
* buttons, or initiation built in behavior.
|
||||
|
||||
@@ -1,11 +1,11 @@
|
||||
import React, { Component } from "react";
|
||||
import { metadata, studies, utils } from "@ohif/core";
|
||||
import React, { Component } from 'react';
|
||||
import { metadata, studies, utils, log } from '@ohif/core';
|
||||
|
||||
import ConnectedViewer from "./ConnectedViewer.js";
|
||||
import PropTypes from "prop-types";
|
||||
import { extensionManager } from "./../App.js";
|
||||
import ConnectedViewer from './ConnectedViewer.js';
|
||||
import PropTypes from 'prop-types';
|
||||
import { extensionManager } from './../App.js';
|
||||
|
||||
const { OHIFStudyMetadata } = metadata;
|
||||
const { OHIFStudyMetadata, OHIFSeriesMetadata } = metadata;
|
||||
const { retrieveStudiesMetadata } = studies;
|
||||
const { studyMetadataManager, updateMetaDataManager } = utils;
|
||||
|
||||
@@ -13,65 +13,97 @@ class ViewerRetrieveStudyData extends Component {
|
||||
static propTypes = {
|
||||
studyInstanceUids: PropTypes.array.isRequired,
|
||||
seriesInstanceUids: PropTypes.array,
|
||||
server: PropTypes.object
|
||||
server: PropTypes.object,
|
||||
};
|
||||
|
||||
state = {
|
||||
studies: null,
|
||||
error: null
|
||||
};
|
||||
|
||||
async componentDidMount() {
|
||||
// TODO: Avoid using timepoints here
|
||||
//const params = { studyInstanceUids, seriesInstanceUids, timepointId, timepointsFilter={} };
|
||||
const { studyInstanceUids, seriesInstanceUids, server } = this.props;
|
||||
constructor(props) {
|
||||
super(props);
|
||||
this.state = {
|
||||
studies: null,
|
||||
error: null,
|
||||
};
|
||||
}
|
||||
|
||||
async loadStudies() {
|
||||
try {
|
||||
const { server, studyInstanceUids, seriesInstanceUids } = this.props;
|
||||
const studies = await retrieveStudiesMetadata(
|
||||
server,
|
||||
studyInstanceUids,
|
||||
seriesInstanceUids
|
||||
);
|
||||
this.setStudies(studies);
|
||||
} catch (e) {
|
||||
this.setState({ error: true });
|
||||
log.error(e);
|
||||
}
|
||||
}
|
||||
|
||||
// Render the viewer when the data is ready
|
||||
// TODO: CLEAR THIS SOMEWHERE ELSE
|
||||
studyMetadataManager.purge();
|
||||
|
||||
setStudies(givenStudies) {
|
||||
if (Array.isArray(givenStudies) && givenStudies.length > 0) {
|
||||
const sopClassHandlerModules =
|
||||
extensionManager.modules['sopClassHandlerModule'];
|
||||
// Map studies to new format, update metadata manager?
|
||||
const updatedStudies = studies.map(study => {
|
||||
const studies = givenStudies.map(study => {
|
||||
const studyMetadata = new OHIFStudyMetadata(
|
||||
study,
|
||||
study.studyInstanceUid
|
||||
);
|
||||
const sopClassHandlerModules =
|
||||
extensionManager.modules["sopClassHandlerModule"];
|
||||
|
||||
study.displaySets =
|
||||
study.displaySets ||
|
||||
studyMetadata.createDisplaySets(sopClassHandlerModules);
|
||||
if (!study.displaySets) {
|
||||
study.displaySets = studyMetadata.createDisplaySets(
|
||||
sopClassHandlerModules
|
||||
);
|
||||
}
|
||||
studyMetadata.setDisplaySets(study.displaySets);
|
||||
|
||||
// Updates WADO-RS metaDataManager
|
||||
updateMetaDataManager(study);
|
||||
|
||||
studyMetadataManager.add(studyMetadata);
|
||||
|
||||
// Attempt to load remaning series if any
|
||||
this._attemptToLoadRemainingSeries(studyMetadata);
|
||||
return study;
|
||||
});
|
||||
|
||||
this.setState({
|
||||
studies: updatedStudies
|
||||
});
|
||||
} catch (err) {
|
||||
this.setState({
|
||||
error: true
|
||||
});
|
||||
|
||||
// TODO: Handle gracefully instead of throwing?
|
||||
throw new Error(err);
|
||||
this.setState({ studies });
|
||||
}
|
||||
}
|
||||
|
||||
_addSeriesToStudy(studyMetadata, series) {
|
||||
const sopClassHandlerModules =
|
||||
extensionManager.modules['sopClassHandlerModule'];
|
||||
const study = studyMetadata.getData();
|
||||
const seriesMetadata = new OHIFSeriesMetadata(series, study);
|
||||
studyMetadata.addSeries(seriesMetadata);
|
||||
studyMetadata.createAndAddDisplaySetsForSeries(
|
||||
sopClassHandlerModules,
|
||||
seriesMetadata
|
||||
);
|
||||
study.displaySets = studyMetadata.getDisplaySets();
|
||||
updateMetaDataManager(study, series.seriesInstanceUid);
|
||||
this.setState(function(state) {
|
||||
return { studies: state.studies.slice() };
|
||||
});
|
||||
}
|
||||
|
||||
_attemptToLoadRemainingSeries(studyMetadata) {
|
||||
const { seriesLoader } = studyMetadata.getData();
|
||||
if (!seriesLoader) {
|
||||
return;
|
||||
}
|
||||
while (seriesLoader.hasNext()) {
|
||||
seriesLoader
|
||||
.next()
|
||||
.then(
|
||||
series => void this._addSeriesToStudy(studyMetadata, series),
|
||||
error => void log.error(error)
|
||||
);
|
||||
}
|
||||
}
|
||||
|
||||
componentDidMount() {
|
||||
// TODO: CLEAR THIS SOMEWHERE ELSE
|
||||
studyMetadataManager.purge();
|
||||
this.loadStudies();
|
||||
}
|
||||
|
||||
render() {
|
||||
if (this.state.error) {
|
||||
return <div>Error: {JSON.stringify(this.state.error)}</div>;
|
||||
|
||||
@@ -2272,6 +2272,16 @@
|
||||
once "^1.4.0"
|
||||
universal-user-agent "^4.0.0"
|
||||
|
||||
"@ohif/extension-cornerstone@^2.0.0":
|
||||
version "2.0.0"
|
||||
resolved "https://registry.yarnpkg.com/@ohif/extension-cornerstone/-/extension-cornerstone-2.0.0.tgz#b4ee3b594212502192cdd311a100354857280548"
|
||||
integrity sha512-hvJ3t2GRcu906NiYpUWaJIB9ja/M/MKEYLy19t4XBFpqf4VqoezR2KJpZelmZjQscXGaDQeZgvr3DJO5Nva8Uw==
|
||||
dependencies:
|
||||
"@babel/runtime" "^7.5.5"
|
||||
classnames "^2.2.6"
|
||||
lodash.throttle "^4.1.1"
|
||||
react-cornerstone-viewport "0.1.30"
|
||||
|
||||
"@ohif/i18n@^0.2.3":
|
||||
version "0.2.5"
|
||||
resolved "https://registry.yarnpkg.com/@ohif/i18n/-/i18n-0.2.5.tgz#2b92a78109823ce0f50dd590201d980a5fd64974"
|
||||
@@ -8273,6 +8283,11 @@ gl-matrix@3.0.0:
|
||||
resolved "https://registry.yarnpkg.com/gl-matrix/-/gl-matrix-3.0.0.tgz#888301ac7650e148c3865370e13ec66d08a8381f"
|
||||
integrity sha512-PD4mVH/C/Zs64kOozeFnKY8ybhgwxXXQYGWdB4h68krAHknWJgk9uKOn6z8YElh5//vs++90pb6csrTIDWnexA==
|
||||
|
||||
gl-matrix@^3.1.0:
|
||||
version "3.1.0"
|
||||
resolved "https://registry.yarnpkg.com/gl-matrix/-/gl-matrix-3.1.0.tgz#f5b2de17d8fed95a79e5025b10cded0ab9ccbed0"
|
||||
integrity sha512-526NA+3EA+ztAQi0IZpSWiM0fyQXIp7IbRvfJ4wS/TjjQD0uv0fVybXwwqqSOlq33UckivI0yMDlVtboWm3k7A==
|
||||
|
||||
gl-preserve-state@^1.0.0:
|
||||
version "1.0.0"
|
||||
resolved "https://registry.yarnpkg.com/gl-preserve-state/-/gl-preserve-state-1.0.0.tgz#4ef710d62873f1470ed015c6546c37dacddd4198"
|
||||
@@ -14954,12 +14969,13 @@ react-transition-group@^4.1.1:
|
||||
loose-envify "^1.4.0"
|
||||
prop-types "^15.6.2"
|
||||
|
||||
react-vtkjs-viewport@0.1.0:
|
||||
version "0.1.0"
|
||||
resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.1.0.tgz#a00b114b635ff95a82ae1227d70c248e4cafddf4"
|
||||
integrity sha512-0gnRfntpV6ZBNvZOHzjHapFeJajO8nfkSvO5SNUu41bkyXxqYcJwZvb3EWbd04V1RnA0AnKRoR/KL+I09Os7gg==
|
||||
react-vtkjs-viewport@0.1.4:
|
||||
version "0.1.4"
|
||||
resolved "https://registry.yarnpkg.com/react-vtkjs-viewport/-/react-vtkjs-viewport-0.1.4.tgz#f5ecc7dd52ab065d54656f36851f49b058ba683f"
|
||||
integrity sha512-07hVFJJ9LTy+Z9dgdPiPkaohVb013bgjNgH29MVafnjwH92YOXJzfFbf8/yzzVIZsYCETFf7rVw+oMGQJs5TAA==
|
||||
dependencies:
|
||||
date-fns "^2.2.1"
|
||||
gl-matrix "^3.1.0"
|
||||
|
||||
react-with-direction@1.3.0:
|
||||
version "1.3.0"
|
||||
|
||||
Reference in new issue
Block a user