Add the ability to merge two different series queries to generate a complete study query result. Provides basic support for other types of merges, but those aren't yet added as full features.
* fix bugs for the RT for the new demo
* fix SM with the static-wado server
* remove thumbnail from tmtv
* migration guide
* fix stability for the rt struct
* apply review comments
* add loading indicator to SM
* pdf works
* try to fix relative bulkData
* fix the rest
* fix preflight for the SM
* fix typo
* apply review comments
* yarn lock
* fix(DICOM PDF and Video)
- added retrieve.directURL for local DICOM load data source; it returns a data URL
- fixed various checks for video using transfer syntaxes and SOP class UID with number of frames
- added call to 'rendered' endpoint for those data sources that support it; others get BulkDataURI
* Added DOC (PDF) and OT (for video in particular) to list of non-image thumbnail modalities.
* Fixed broken e2e tests.
* feat(DICOM Upload)
OHIF #3297
- DicomWebDataSource.store.dicom now accepts an ArrayBuffer of data sets to store
- DicomWebDataSource.store.dicom now also accepts optional callbacks to track upload and an AbortSignal object to cancel upload
- Added DicomFileUploader class that performs and tracks the upload of a DICOM file
- Added various UI pieces for the upload: DicomUpload, DicomUploadProgress, DicomUploadProgressItem
- ProgressLoadingBar was extracted from LoadingIndicatorProgress so it can be reused
- Modal dialogues can now optionally prevent an outside click from closing the Modal
* Passing an XMLHttpRequest to the dataSource.store.dicom method instead of callbacks and AbortSignal.
Cleanup of various UI pieces to minimize code and increase readability.
* Made the DicomUpload component a customization module exported by the cornerstone extension.
* Exposed a copy of the data source configuration via the IWebApiDataSource interface.
Added dicomUploadEnabled to a data source's configuration.
* Code clean up.
* Upgraded the dicomweb-client version to one that provides the ability to
pass a custom HTTP request. DICOM upload uses that custom HTTP request
to track progress and cancel requests.
* Distinguished between failed and cancelled uploads.
* Allow no selection in the upload dialogue.
Fixed the styling of various progress information so that everything aligns.
* Switched from cornerstone wado image loader to cornerstone dicom image loader for DICOM upload.
* Added special cancelled icon to differentiate from failed.
* Added a bit of spacing between the upload progress bar and percentage.
* Fixed minor issue with upload rejection.
* Performance improvement for cancel all uploads:
- use React memo for each upload item progress (row)
- do not await each request of a cancel all
* Fixed various padding/spacing for the DICOM upload drop zone component.
Changed the border dashing for the DICOM upload drop zone to be a background image gradient.
Added hover and active effects to the 'Cancel All Uploads' text.
* feat: initial RT support
* make the segmentation service work with representation data
* feat: make segmentation service work with representations
* fix rtss vis
* fix: rt hydration
* fix the rendering of rt names
* fix imports
* refactor: Modify status and click handling for hydration of RTStructures
Modify status and click handling for hydration of RTStructures by renaming `onPillClick` to `onStatusClick` in `OHIFCornerstoneRTViewport.tsx` and `_getStatusComponent.tsx` files. Also, update initial segmentation configurations in `PanelSegmentation.tsx` and simplify configuration changes and values for segmentation service in `SegmentationService.ts`. Finally, remove console debug in `CornerstoneViewportService.ts`.
* wip for highlighting contours
* refactor rt displayset code
* review code update
* update cornerstone dependencies
* refactor: Update license year, version number, and minor code cleanup
This commit updates the license year in several files, updates the version number in package.json, and contains minor code cleanup in two files.
* add bulkdataURI retrieve for RT
* fix package version
* apply review comments
* apply review comments
* apply review comments
* feat(panels): refactor and streamline segmentation configuration and inputs
Rewrote state hooks and streamlined the configuration input for `PanelSegmentation` to be more verbose and reusable. Included several new input types, including the `InputRange` component which now shows a fixed floating value based on the step provided. The `SegmentationConfig` component now works with dynamic values controlled by `initialConfig`. These changes should improve function usability and make the code more maintainable going forward.
* fix various bugs
* fix contour delete by upgrade cs3d version
* feat(viewport, inputNumber, segmentationConfig, orthanc): Implement minimum and maximum values for input number components, and useBulkDataURI for Orthanc configuration. Compare measurement view planes with absolute viewport view planes in Cornerstone viewport.
* update yarn lock
* feat: Allow navigating to a specified series and sop instance
This was a feature in OHIF v2, so adding it to v3, albeit with new
parameters.
feat: Allow comma separated as well as repeated args params
* docs
* Test fixes
* feat: Navigate to SOP selected - PR fixes
* Updated docs
* PR fixes
* feat: warn for overlapping segments
* fix: typo
* refactor mpr toggle and stack sync
* fix: wip for more general mpr
* fix: tool groups for mpr
* fix: changing of viewport id
* fix: viewport Id for the seg viewports
* fix
* update cornerstone version
* feat: add initial sop class handler for SEG
* feat: move segmentation service
* update segmentation service methods
* fix: viewport data structure
* feat: Add initial render for the DICOM SEG for each displaySet
* fix: various wrong architectural dependencies between services
* feat: initial separate SEG display in each viewport
* feat: refactore viewport action bar
* initial work for SEG hydration
* fix: various bugs regarding drag and dropping different viewports
* fix: rendering issues for multiple seg displaysets
* fix: bugs for thumbnail and hydration
* feat: fix the initial segment color
* update after rebase
* feat: initial design for the segmentation group table
* feat: initial new design for the segmentation panel
* feat: segmentation panel
* feat: make segmentation appear on all related viewports
* fix: segmentation load bug based on functional groups
* initial work for segmentation crosshairs
* fix: various stylings and functionality
* fix: various stylings for the seg panel
* fix: overflow styles
* feat: add more ui components
* feat: added segmentation config
* feat: add jump to segment
* feat: add jump to segment for DICOM SEG viewport
* fix: bugs after rebase
* feat: jump in segmentation viewport
* fix: mpr support for seg
* feat: add more icons
* feat: new icons
* feat: add new side panel
* feat: add segmentation config
* feat: add loading indicator to ohif
* feat: make hanging protocols follow matching rules for viewports
* feat: enhance drag and drop to be hanging protocol aware
* fix: mpr restore previous layout
* fix: crosshairs toggle
* fix: add auth headers to the dicom loader via dicomwebclient
* fix: bug for crosshairs toggle in mpr
* fix: seg viewport reusing old toolGroup
* feat: add loading animation with lottie
* fix: various bugs for Segmentation hydration in mpr
* feat: change outline alpha to outline opacity
* feat: loading indicator for seg viewport
* fix: various segmentation group styles
* fix: local mode for seg
* feat: add animation for the highlight
* fix: loading indicatro to show segment indices
* feat: enhance modality drop down ui
* fix: panels
* fix: download form
* fix: layout shift in loading indicator
* fix: loading indicator to have correct values
* fix: update software number
* fix: image jump between MPR and default
* fix: segmentation cleanup and cine service cleanup
* fix: segmentation toolgroup clena up
* fix: highlight interval should not trigger again
* fix: issue with multiframe sorting
* rename: change onSeriesChange to onArrowsClick
* fix: buttons for tmtv and layout shift
* fix: various bugs wrt crosshairs
* fix: crosshairs re init on reset camera
* fix: middle slice calculation different from cs middle reset camera
* fix: reset camera should reset viewport camera
* fix: loading segments in MPR mode
* fix: tmtv hp back to before
* fix: layout shift
* feat: orientation markers for volume viewport
* fix: capture for volume viewports
* fix: memory leak for back to worklist
* fix: loading bar bg color
* fix: side panel for only one panel
* fix: react select style in production
* fix: various styling for segmentation groups
* fix: various ui styles
* feat: add new segmentation config styles
* fix: hover state for segmentation item
* fix: side panel layout shift
* temp add panels
* try to fix scrollbar for thimbnail
* fix: scroll not appearing for side panels
* feat: changed styles for scrollbar
* feat: add cpu fallback warning
* fix: webworker destroy
* fix: select styles
* fix: orientation marker color and position
* fix: capture screenshot for volume viewports
* fix: hide segment visibility on mpr
* fix: reloading an already loaded seg displayset
* feat: add is equal
* fix: mpr jump to measurements
* apply review comments
* fix: optimization for the segmentation load
* fix: remove unnecessary context menu and hp service reset
* fix: segmentation service wrt brush settings
* feat: initial work for the stack synchronization
* fix: add validateDisplaySetSelectorsForNewDisplaySets to make sure drag and drop can follow requirements
* fix: various react proptypes
* fix: thumbnails for the tmtv and change default props to default params
* feat: make showing loading indicator configurable and add docs
* bump versions and add more docs
* fix demo
* update cornerstone versions
* apply review comments
* feat: add reference lines
* fix build
* fix unit tests
* add reference lines icon
* fix: e2e tests
* fix static wado config
* docs: add segmentation service docs
* fix: docker build
* fix: keep camera and bump versions
* Try re-enabling minification to fix deploy previews
Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
* Changed the static wado filter to allow filtering for series before start make requests of the entire metadata
* fixed first filter to use studyFilterKeys
Co-authored-by: Thomas Forster <thomasforster@ip-192-168-68-104.eu-west-2.compute.internal>
