* feat: Update to use pnpm (#6031) [simulated squash-merge]
* feat: load DICOM SEG images via imageLoader
* feat: load DICOM SEG images via imageLoader
* PR review fixes
* Test fragment of compressed multiframes
* fix: Removed dependencies incorrectly
* Update frame as a targetted change to avoid stripping remaining params
* lock
* Update test to agree with the missing representation branch
* test(contour): contour color change coverage (#6042)
* test(contour): contour interactions delete segment (#6069)
---------
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
* chore(version): Update package versions to 3.13.0-beta.98 [skip ci]
* feat(testing): OHIF Test Agent Skills (#5993)
* chore(version): Update package versions to 3.13.0-beta.99 [skip ci]
* test(contour): Add the ContourSegmentToggleLock.spec.ts test file to test contour locking (#6072)
* chore(version): Update package versions to 3.13.0-beta.100 [skip ci]
* chore(testing): Flock lock for playwright tests; Pin node version for OHIF; add more workers (#6099)
* update Cypress apt deps for Ubuntu Noble (drop libgconf-2-4, libasound2→libasound2t64)
* chore(version): Update package versions to 3.13.0-beta.101 [skip ci]
* Debug fixes
* perf(seg): pass explicit frame decode concurrency (16) to SEG loader
Pass an explicit concurrency value (SEG_FRAME_DECODE_CONCURRENCY = 16) into
createFromDicomSegImageId rather than relying on the adapter default, so the
SEG frame fetch/decode parallelism is set at the call site and is ready to
become configurable.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs(behaviours): add behaviours section + multiframe Part 10 prefetch proposal
Start a "Behaviours" docs section for documenting how the system and UI behave
end-to-end (observed behaviours, design proposals, and failure modes), with an
index README and a Docusaurus category.
First entry is the proposal for loading a multiframe SEG as a single Part 10
instance: prefetch the whole instance (gated by loadMultiframeAsPart10RaceTimeMs),
parse it with dcmjs (handling multipart/related vs raw DICOM), and register the
per-frame compressed pixels into the Cornerstone3D core image cache (the single
uniform frame registry) so the per-frame load path is served locally while the
standard decode path is unchanged. Best-effort: falls back to per-frame fetches
on any failure.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Pre-cache the image data using a full part10 file for performance
* Add customizations to specify type of segmentation save
* Add clearcache of the cacheData
* Bump @cornerstonejs/* pins 5.1.3 -> 5.4.10 to match libs/@cornerstonejs base
libs/@cornerstonejs (fix/use-imageLoader-for-seg) is based on the released
cs3d 5.4.10 (merge-base with origin/main is the 5.4.10 version bump), so pin
OHIF to that release. The local branch changes still reach the app via the
cs3d:link symlinks; these pins keep the lockfile/npm fallback aligned.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* Fix seg OOM
* fix: file meta garbage element, bogus NumberOfFrames, unguarded source-map-loader
- dicomWriter: drop the naturalized meta.TransferSyntaxUID assignment that
dcmjs wrote as a garbage (0000,0000) element into every saved file's meta
group (download / clipboard / local wadouri blob / local store); keep the
hex 00020010 assignment, which is required for string-form _meta fallbacks.
- registerNaturalizedDatasetForLocalWadouri: keep the computed frame count
local so single-frame IODs (SR, RTSTRUCT) no longer gain a bogus
NumberOfFrames element in their serialized form.
- rsbuild.config: resolve source-map-loader opportunistically (it is not a
project dependency; the rule only serves the gitignored cs3d-link
workflow) so fresh clones no longer crash at config load.
- Regression tests for both writer fixes (mutation-checked).
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* PR review comment fixes
* Update versions
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Co-authored-by: diattamo <mmddiatta@gmail.com>
Co-authored-by: ohif-bot <danny.ri.brown+ohif-bot@gmail.com>
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
- Add FrameOfReferenceUID to SEG and RTSTRUCT displaySet in SOP Class Handlers so the FOR is available for filtering
- Sync optimisticOverlayDisplaySets when background display set changes so the overlay menu reflects the correct state after a background switch
- Add FOR matching guard to the hydrate segmentation synchronizer to prevent the hydration synchronizer from blindly mirroring segmentations from a source viewport to a target viewport if their primary Frames of Reference do not align.
- fix segmentation overlay order reversal on viewport re-render
* [WIP] Fix contour annotations RTSS saving
* fix: Export image sop image reference provider
* Fixes for download with filename
* Updates to fix metadata issues with CS3D
* Updates to save menu
* Fixing some additional re-save metadata
* Add support for saving with predecessor image sequence
* PR comment fixes
* fix: Load RTSS after save
* fix segmentation save
* fix load of mixed seg/rt studies
* Use frame module to get information on the frame shown
* Fix study browser to use instances.length when numImageFrames not present
* fix: Load of display set split from multiple non-FOR referenes
* Fix RT and SEG applying to wrong series because of using
referenced series sequence without checkout sop instances
* Fix save seg
* Update to released CS3D versions
* test: Add revokeObjectURL to test download blob
* Add hard dependency on mode-basic to fix build order issues
* fix: build
* Try to fix build segmentation
* PR comments
* PR comment update
