Commit Graph
343 Commits
Author SHA1 Message Date
Danny Brown 552df4c9a8 ci: test docs-publish (#803)
* ci: test docs-publish

* Require unit tests for dry run

* ci: Make sure our docs publish is executable

* Try to correct path issue

* Try repo prefix

* Try as yarn command

* Need a workspace to attach to from previous step

* Add before we call our bash script

* See if we can enforce commands being available -- or just install locally?

* Try again

* Try SSH

* Include username in gh https url

* Note regarding failure on PR branches

* Remove docs publish from PR workflow
2019-08-26 22:19:05 -04:00
Erik Ziegler 51472b2276 chore: Remove react-scripts from package.json 2019-08-15 12:26:43 +02:00
Erik Ziegler 20d8f0f5db chore: Add hot-reloading for the React app 2019-08-15 09:47:49 +02:00
dannyrb a034bdd478 Updage engine config 2019-08-14 14:29:57 -04:00
Danny Brown 08ff214ea6 Chore/kill yalc with fire (#629)
* init

* more shifting

* Move @babel dependencies up to workspace root

* Begin updating dependent libraries to use sync'd webpack builds w/ watches

* Commit changes before a long weekend

* Split packages into platform and extensions

* Consolidate how/where we specify file/module type entrypoints

* Make it possible to pass in extensions as App props

* Resolve viewer's modules

* Target for UMD bundle

* Add Webpack Stylus loader

* Provide WebPack build options for microscopy, vtk, and ui

* Better entrypoint for extensions

* Push changes up to switch PCs

* Fix ESM symlink build for Viewers

* Shift docs to root

* Specify additional lerna config props

* Begin providing basic readme info

* Rename example extension folder

* Shift links to bottom of doc

* First attempt at a netlify deploy preview

* Attempt to fix deploy preview build

* push workspace enabled to initial command; remove second yarn install; use npx to call gitbook cli commands

* Try to use global gitbook-cli

* Export node_modules path

* More agressive with modifying PATH

* Follow deploy log output advice

* try again to set bin path

* Try swapping bash with a new shell

* Try bash -l instead of exec bash

* Annd let's try again

* and again

* We may have figured it out johnny, boy

* We need to pull cornerstone-wado-image-loader files from hoisted node_modules

* Attempt to fix ticks/escapes

* Change copy syntax; try running tests on viewers from root for circleci

* Lower version to match circleci image

* Try alternative jest-canvas-mock location and version file syntax

* Run version command instead of calling node directly

* Try alternative jest transform

* Set path and enable workspaces

* Add codecov flags

* Use cpx so our copying finishes?

* Get all platform unit tests to run

* Run and report individually and in parallel

* Try once relying on codecov yaml to split w/ flags

* Add projects to split by flags

* Generate separate reports

* Trigger codecov after everything has finished running; these may not support flags

* Use recommended flags from issue comments for codecov

* Fix typo

* Remove clear flag

* Shift back to calling codecov from root

* Generate example for codecov issue

* Try fixing paths

* Simplify

* Try using codecov orb

* Bump circleci version

* Upload core and viewer

* Use full string paths

* Remove individual codecov calls

* Fix dir

* Combine files before upload

* Escape anchors

* tryfix syntax

* Escape string literal

* Combine lines to reduce path

* long paths

* Use home alias

* Fix filename

* Try to see the contents of our cat'd file

* Also upload `core`

* Try running with aliased folder

* Fix path; split PR and Merge unit tests into separate jobs

* Set default threshold

* Fix typo

* Changing to scoped package names

* Adding note

* Catch more updates

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.0
 - @ohif/extension-dicom-html@0.0.4-alpha.0
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.0
 - @ohif/extension-dicom-pdf@0.0.8-alpha.0
 - @ohif/extension-vtk@0.1.4-alpha.0
 - @ohif/core@0.11.1-alpha.0
 - @ohif/i18n@0.2.3-alpha.0
 - @ohif/ui@0.2.18-alpha.0
 - @ohif/viewer@0.0.22-alpha.0

* Clean up primary readme

* Support for dev and dev:* commands

* Shift build command; satisfy default PWA build

* Remove old scripts

* Clean up UI to set webpack scripts

* Tidy up project links

* Clean duplicate code in UI project

* Update UI project's docs

* Clean up ui and i18n config

* Reduce duplicate code in `@ohif/core`

* Fix @ohif/ui versions

* bump @ohif/core versions

* Redux testkit dep

* Remove unused/duplicate config files for projects/packages

* ohif-core --> @ohif/core

* Safer publish command

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.1
 - @ohif/extension-dicom-html@0.0.4-alpha.1
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.1
 - @ohif/extension-dicom-pdf@0.0.8-alpha.1
 - @ohif/extension-vtk@0.1.4-alpha.1
 - @ohif/core@0.11.1-alpha.1
 - @ohif/i18n@0.2.3-alpha.1
 - @ohif/ui@0.2.18-alpha.1
 - @ohif/viewer@0.0.22-alpha.1

* test version bump

* Add global prettier config

* chore(release): publish %s [skip ci]

 - @ohif/viewer@0.0.22-alpha.2

* test lerna publish

* Update package.jsons

* Fix build scripts

* catch changes

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.2
 - @ohif/extension-dicom-html@0.0.4-alpha.2
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.2
 - @ohif/extension-dicom-pdf@0.0.8-alpha.2
 - @ohif/extension-vtk@0.1.4-alpha.2
 - @ohif/core@0.11.1-alpha.2
 - @ohif/i18n@0.2.3-alpha.2
 - @ohif/ui@0.2.18-alpha.2
 - @ohif/viewer@0.0.22-alpha.3

* fix eslint issues caused by eslint 6 and our react-app config

* Publish with canary tag

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.3
 - @ohif/extension-dicom-html@0.0.4-alpha.3
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.3
 - @ohif/extension-dicom-pdf@0.0.8-alpha.3
 - @ohif/extension-vtk@0.1.4-alpha.3
 - @ohif/core@0.11.1-alpha.3
 - @ohif/i18n@0.2.3-alpha.3
 - @ohif/ui@0.2.18-alpha.3
 - @ohif/viewer@0.0.22-alpha.4

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.4
 - @ohif/extension-dicom-html@0.0.4-alpha.4
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.4
 - @ohif/extension-dicom-pdf@0.0.8-alpha.4
 - @ohif/extension-vtk@0.1.4-alpha.4
 - @ohif/core@0.11.1-alpha.4
 - @ohif/i18n@0.2.3-alpha.4
 - @ohif/ui@0.2.18-alpha.4
 - @ohif/viewer@0.0.22-alpha.5

* Simplify build

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.5
 - @ohif/extension-dicom-html@0.0.4-alpha.5
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.5
 - @ohif/extension-dicom-pdf@0.0.8-alpha.5
 - @ohif/extension-vtk@0.1.4-alpha.5
 - @ohif/core@0.11.1-alpha.5
 - @ohif/i18n@0.2.3-alpha.5
 - @ohif/ui@0.2.18-alpha.5
 - @ohif/viewer@0.0.22-alpha.6

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.6
 - @ohif/extension-dicom-html@0.0.4-alpha.6
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.6
 - @ohif/extension-dicom-pdf@0.0.8-alpha.6
 - @ohif/extension-vtk@0.1.4-alpha.6
 - @ohif/core@0.11.1-alpha.6
 - @ohif/i18n@0.2.3-alpha.6
 - @ohif/ui@0.2.18-alpha.6
 - @ohif/viewer@0.0.22-alpha.7

* Split version and publish

* chore(release): publish %s [skip ci]

 - @ohif/extension-cornerstone@0.0.39-alpha.7
 - @ohif/extension-dicom-html@0.0.4-alpha.7
 - @ohif/extension-dicom-microscopy@0.0.9-alpha.7
 - @ohif/extension-dicom-pdf@0.0.8-alpha.7
 - @ohif/extension-vtk@0.1.4-alpha.7
 - @ohif/core@0.11.1-alpha.7
 - @ohif/i18n@0.2.3-alpha.7
 - @ohif/ui@0.2.18-alpha.7
 - @ohif/viewer@0.0.22-alpha.8

* Try simplify netlify build

* react-viewerbase --> @ohif/ui

* add test for stylus loader

* Try new way to specify publish path

* Use an output folder that won't be ignored

* Try move command

* fiddle with paths

* Dig for some information

* Make sure we're in root for our commands

* Remove discovery

* Setup script-tag example

* Fix typo

* Move config folder

* Update cornerstone extension to use shared/root webpack configs

* capture changes

* Update extension webpack configs

* Don't check in docz output

* Fix babel runtime resolution issue

* Simplify ui build steps

* Push in progress

* Shift directories

* Get viewer dev path to work

* Fix viewer commonjs build

* Fix build pwa config for viewers

* Make sure our package specific command can be called from root

* Update notes

* Fix imports and misc. merge notes

* Bump wado-image-loader version

* Switch up commands to remove webworkers copy

* Fix CI config

* Fix more broken package references

* Add react-dropzone

* Persist so e2e test can use

* Fix lockfile

* Use cypress orb to simplify CI

* Fix config

* Try again

* Install yarn latest for orb

* Install yarn a different way

* Wait on correct port

* Run tests in viewer project

* Fix cypress config

* Make Cypress happier - use default location

* Simplify e2e testing

* Capture UI changes since fork

* Catch core up

* Grab latest deps after merge

* Fix broken import

* Make sure cornerstone-wado-image-loader resolves to 3+

* Note regarding orbs

* Fix refresh on 404 routes

* Fix odd error for cornerstone-wado-image-loader

* Different target for UMD

* Simplify dev script

* Try to get fancy with netlify output

* Let's do it again

* Try to fix measurementTools issue

* See if we can get our lerna magic to work on merge to monorepo branch
2019-08-13 15:36:46 -04:00
Erik Ziegler 36952c401a fix(package.json) - Bump @ohif/i18n to 0.2.5 to add further Chinese translations 2019-07-31 12:45:02 +02:00
Erik Ziegler 2174f4f2fd fix(package.json) - Bump @ohif/i18n to 0.2.4 to add Vietnamese and improve Chinese translations 2019-07-31 11:17:10 +02:00
Erik Ziegler ec1946e379 ci(e2e): Fix cypress test memory issues by splitting build step out (#738) 2019-07-30 14:51:28 +02:00
Erik Ziegler a4112c46a5 fix(package.json): Bump WADO Image Loader dependency, remove unnecessary worker and codec paths (#727)
Note: had to disable sourcemaps for commonjs modules. This seems to be the only way to prevent memory issues on CircleCI.
2019-07-30 11:00:08 +02:00
David Wire e73d009c21 fix(package.json): Resolve react/react-dom dependency conflict for embedded users (#734)
* fix(package.json): Resolve react/react-dom dependency conflict for embedded users

Some of the recent changes around the script-tag support for ohif/Viewers included moving react and
react-dom from peerDependencies to dependencies. This caused an error for embedded consumers of the
viewer because there could be multiple versions of react included. The error in the console points
to this link: https://reactjs.org/warnings/invalid-hook-call-warning.html. These changes are
necessary to resolve the issue for embedded users and don't seem to break the standalone version
either.

* fix(script-tag/index.html): Add `react` and `react-dom` as external scripts for cypress tests

The cyrpress tests won't pass unless we add the `react` and `react-dom` dependencies as external
scripts since they're no longer first order depdencies.
2019-07-30 08:30:23 +02:00
Erik Ziegler f826341631 fix(package.json): Bump VTK extension to fix jitter issues in MPR view 2019-07-29 21:20:11 +02:00
Egor Lezhnin 40bf1a2efd feat(fuzzyMatching): fuzzymatching for query parameters if server config indicates support 2019-07-29 09:56:07 -04:00
Erik Ziegler b1df019c49 fix(package.json): Update @ohif/i18n to 0.2.3 2019-07-29 10:03:48 +02:00
Erik Ziegler 5802cf18eb fix(script-tag): Include React and ReactDOM as dependencies and add installViewer function to simplify script tag usage. (#721) 2019-07-29 08:20:07 +02:00
Danny Brown 210c2e8d2c fix: clear annotations toolbar button 2019-07-26 16:38:37 -04:00
Erik Ziegler da318c9c8c feat(DicomUploader): Make DICOM Uploader work with all DICOMWeb servers (#717)
* feat(DicomUploader): Make DICOM Uploader work with all DICOMWeb servers

* Bump viewerbase version
2019-07-26 15:04:28 +02:00
Danny Brown ba261a0d54 fix: support for next/previous image hotkeys via cornerstone extension update
* Bump @ohif/extenions-cornerstone react-cornerstone-viewport dep and cut release

* fix: bump @ohif/extension-cornerstone version to latest

* Catching the yarn lock changes

* Cut new release for cornerstone extension and update Viewers to use it

* Add new commands to netlify dmeo

* Flip directions for next/previous image
2019-07-23 15:39:56 -04:00
Danny Brown 5a13194203 fix(react-cornerstone-viewport): Viewport resizes on stack scroll (#709)
* Bump @ohif/extenions-cornerstone react-cornerstone-viewport dep and cut release

* fix: bump @ohif/extension-cornerstone version to latest

* Catching the yarn lock changes
2019-07-23 13:00:02 -04:00
Erik Ziegler a2cc477a1a fix(package.json): Update @ohif/extension-microscopy to 0.0.12 2019-07-22 15:47:45 +02:00
Erik Ziegler 83d7d59954 fix(package.json): Update ohif-core and dicomweb-client to fix Palette Color BulkData retrieval (#703) 2019-07-22 15:09:55 +02:00
Erik Ziegler f547fdf832 fix(OpenIDConnect): Stop storing tokens in sessionStorage. Prefix OIDC routes automatically. Add logout button (#698) 2019-07-21 16:43:42 +02:00
Erik Ziegler 54e0e32e22 fix(package.json): Bump ohif-core, extension-microscopy, and dicomweb-client (#697) 2019-07-21 10:04:07 +02:00
Erik Ziegler 71f11a4856 fix(package.json): Update microscopy, pdf, and html extensions to fix thumbnail labels 2019-07-19 18:24:43 +02:00
Erik Ziegler a34d47c850 fix(package.json): Bump cornerstone-tools to 3.16.0 (#690) 2019-07-19 17:48:29 +02:00
Erik Ziegler f758741950 fix(package.json): Update @ohif/extension-cornerstone to fix loading issue (#689) 2019-07-19 17:07:35 +02:00
Erik Ziegler 104343aad5 fix(package.json): Bump @ohif/vtk-extension usage to fix performance issues, add Slab MIP (#686) 2019-07-18 13:52:06 +02:00
Erik Ziegler 2f104b5e91 feat(ViewerLocalFileData): Add drag/drop to load DICOM files in the Viewer at /local (#644) 2019-07-11 13:49:29 +02:00
Erik Ziegler f256ac5a7d fix(package.json): Fix issues with babel-core causes undefined _objectSpread2 (#650) 2019-07-11 12:59:33 +02:00
Egor Lezhnin 4a09f33446 feat(GoogleCloud): Initial commits to include the Healthcare API Adapter (#584)
* This is a React port of https://github.com/quantumsoftgroup/healthcare-api-adapter - It still needs some UI cleanup.
2019-07-10 09:26:19 +02:00
Erik Ziegler 4095629310 fix(package.json): Bump @ohif/extension-cornerstone to 0.0.40 (#638) 2019-07-09 18:38:31 +02:00
João Felipe de Medeiros Moreira ff2c1cb2f1 test(E2E): End-to-end tests for script tag (#633)
fix #621
2019-07-09 18:08:18 +02:00
Erik Ziegler 562d63fa74 fix(package.json): Update @ohif/extension-dicom-microscopy to fix resizing behaviour
fix #550
2019-07-08 14:31:23 +02:00
Evren Ozkan dd6acb2d03 feat(extension-cornerstone): Add additional tools: Magnify, ROI Window, Probe, Ellipse, Rectangle, Invert, Rotate Right, Flip H, Flip V, Clear 2019-07-08 13:49:56 +02:00
Danny Brown 5ac9048ef0 feat: extension panels
* Snapshot -- Switching branches
* fix classes and hooks for panel componet
* Restore button functionality
* feat: support for expandableToolMenu
* Shift cornerstoneTools config up a layer, and use globalToolSync
* Remaining initCornerstoneTools changes
* Pull in Segmentation Plugin
* Shift MeasurementsPanel to an extension
* Note regarding where data is coming from
* Make sure measurement callback is available
* Bump core version
* Shift MeasurementsTable to a local extensions directory
* Register appCommands as an extension
* Update package dependencies and yarn lock
* Support for panel width
* Ability to pass props to our panel component
* Add a safety check around calling our tacked on method for tool options
* Left sidebar plugins + fix activeIndex prop passed to sidebar.
* fix: viewer height
Now in a shared container w/ top bar, so we need to factor that in when calculating height
* lock file latest
* Update thumbnails if studies has changes
* bump cornerstone version to resolve globalToolSynch history issue
* Default panel to open; studies optional
* Bump minor version for ohif-cornestone-extension
* Simplify button logic
* Accommodate odd roundedButtonGroup value change emit
* Map viewers + selectedViewport instead of pulling off the window
2019-07-04 14:09:13 -04:00
Erik Ziegler 57d2ae23ae ci(package.json): Change settings for viewer.ohif.org to use Locize CDN 2019-06-30 23:40:03 +02:00
Erik Ziegler fd6ec04514 feat(package.json): Update i18n approach to optionally use Locize CDN depending on config. Bump @ohif/extension-vtk @ohif/i18n 2019-06-30 23:10:43 +02:00
Erik Ziegler 8a4306d1b0 fix(package.json): Bump vtk extension and react-viewerbase 2019-06-29 11:35:20 +02:00
Rodrigo Antinarelli 16cea8681e @ohif/i18n: Fix issues with exports and update docs (#598)
* update i18n version -- already published

* update ohif/i18n version and add modules

* update ohif/i18n version

* update translating documentation

* replace addLocales method and exported modules

* lock files

* Update index.js

* fix(@ohif/i18n): export custom methods in the main i18n object

`initI18n`, `addLocales` and `T` are now being exported inside the main `i18n` object.

* remove unecessary dependencies

* update vtk-extension lock file
2019-06-29 09:33:38 +02:00
Erik Ziegler cb565427b3 fix(package.json): Bump ohif-core to fix broken multiframe usage with WADO-RS
fix #539
2019-06-28 17:56:13 +02:00
biharck edb0db349b feat(OHIFStandaloneViewer.js): adding NProgress loading bar on top of the page 2019-06-27 15:28:37 +02:00
Erik Ziegler 5a3f3e3eff fix(package.json): Update react-viewerbase and extension-vtk to ensure old @ohif/i18n is not used 2019-06-27 15:12:42 +02:00
Erik Ziegler 722d68c85a fix(package.json): Update vtk-extension to fix i18n issues 2019-06-27 14:09:20 +02:00
Rodrigo Antinarelli d04bb323f7 @ohif-i18n - Replace use of context to import locales (#575) 2019-06-27 12:01:11 +02:00
Erik Ziegler 2bdcb7c5f7 fix(extension-dicom-microscopy): Update to 0.0.8 to use retrieveRendered by default 2019-06-24 13:32:11 +02:00
João Felipe de Medeiros Moreira 612832069d ci: add e2e tests with cypress
* Creates E2E tests using Cypress and includes two tests

* Improves yarn.lock file

* Includes documentation

* Cypress project id

* test e2e w/ ci and video

* run unit command before e2e

* Also cache cypress

* Persist cypress to next build step

* Try a different path

* Try without working dir

* Persist less data, but restore yarn/cypress cache in next step

* Install cypress to invalidate cache

* Add e2e as a blocker for merged publishing
2019-06-22 10:02:07 -04:00
Danny Brown 51d1679dfb Merge branch 'master' into feature/extensions-panels-and-docs 2019-06-21 00:00:33 -04:00
dannyrb f4e4cfdf39 lock file 2019-06-20 23:50:06 -04:00
dannyrb 23de20d7d3 Bump extension and ohif-core versions 2019-06-20 23:30:52 -04:00
Danny Brown 39d844f106 Merge branch 'master' into dev-react-proxy 2019-06-18 21:05:13 -04:00
dannyrb b542ce4437 port html extension 2019-06-17 16:23:31 -04:00