feat: 🎸 DICOM SR STOW on MeasurementAPI (#954)
* feat: 🎸 DICOM SR STOW on MeasurementAPI Closes: #758 * feat: 🎸 Adding the dataExchance from DICOM SR * feat: 🎸 Fix some issues and get the retrieve measurements working * feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs) * feat: 🎸 Adding a button to start testing SATE functionality * feat: 🎸Small fixes into the code * feat: 🎸 MAke sure we get latest SR in the study, even on lazyLoad mode * Revert "feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)" This reverts commit 4b3a1efb5810487d2319826fd59c03d779882b5e. * feat: 🎸 Make sure after sync we update the viewports and also that annotation tools are set to passive, so it can be drawn in the viewports * feat: 🎸 Remove console logs and start using OHIF.log * feat: 🎸 Refactor measurement table to use Snackbar service of messages and make sure we only show save button if server type is dicomWeb * feat: 🎸 Refactor to remove mocked wadoRoot and use server * Fix to expose error once we can't save the SR * Update DCMJS into latest dev version * Update dcmjs with latest fixes * Fix PR callouts * Logging error on MeasurementReport creation * Preventing from breaking on non supported tools and also warning that some toolType is not sopported * Small error message update * Expose better the errors and when we have unsopported tools into the measurements * Renaming variable * Expose dcmjs tool support check * Change the way we warn the unsupportedTools * Adding style to the button * Small change on button style * Fix git conflicts * Fix after merge with latest master * Fix after merge with master, btn was not clickable * Fixing callouts * Adding util functions into files and refactor with JSDocs * Refactoring code, adding some basic JSDocs * Bump dcmjs with latest version and fixes * JSDocs and small refactors * yarn lock file after dcmjs update * Remove unused parameters * Registering a plain copy of server into measurementAPI * Small refactor * Start changing from toolType to toolName * Rename a function to get instanceMetadata * Adding error if server is not DICOMWeb on retrieve * Move snackbar outside of UI component and use UINotificationService * Refactor and JSDocs * Small fixes on JSDocs (style) * Remove unused import * Improve JSDocs on MeasurementApi * Remove refactor leftover * Improve JSDocs and propTypes * JSDocs and small refactors
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@@ -11,6 +11,7 @@ import ConnectedStudyBrowser from './ConnectedStudyBrowser.js';
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import ConnectedViewerMain from './ConnectedViewerMain.js';
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import SidePanel from './../components/SidePanel.js';
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import { extensionManager } from './../App.js';
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import DICOMSR from '../lib/DICOMSR';
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// Contexts
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import WhiteLabellingContext from '../context/WhiteLabellingContext.js';
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@@ -57,21 +58,31 @@ class Viewer extends Component {
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static propTypes = {
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studies: PropTypes.array,
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studyInstanceUids: PropTypes.array,
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activeServer: PropTypes.shape({
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type: PropTypes.string,
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wadoRoot: PropTypes.string,
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}),
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onTimepointsUpdated: PropTypes.func,
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onMeasurementsUpdated: PropTypes.func,
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// window.store.getState().viewports.viewportSpecificData
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viewports: PropTypes.object.isRequired,
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// window.store.getState().viewports.activeViewportIndex
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activeViewportIndex: PropTypes.number.isRequired,
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isStudyLoaded: PropTypes.bool,
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};
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constructor(props) {
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super(props);
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const { activeServer } = this.props;
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const server = Object.assign({}, activeServer);
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OHIF.measurements.MeasurementApi.setConfiguration({
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dataExchange: {
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retrieve: this.retrieveMeasurements,
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store: this.storeMeasurements,
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retrieve: DICOMSR.retrieveMeasurements,
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store: DICOMSR.storeMeasurements,
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},
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server,
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});
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OHIF.measurements.TimepointApi.setConfiguration({
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@@ -93,18 +104,6 @@ class Viewer extends Component {
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thumbnails: [],
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};
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retrieveMeasurements = (patientId, timepointIds) => {
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OHIF.log.info('retrieveMeasurements');
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// TODO: Retrieve the measurements from the latest available SR
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return Promise.resolve();
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};
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storeMeasurements = (measurementData, timepointIds) => {
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OHIF.log.info('storeMeasurements');
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// TODO: Store the measurements into a new SR sent to the active server
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return Promise.resolve();
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};
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retrieveTimepoints = filter => {
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OHIF.log.info('retrieveTimepoints');
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@@ -171,7 +170,7 @@ class Viewer extends Component {
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};
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componentDidMount() {
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const { studies } = this.props;
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const { studies, isStudyLoaded } = this.props;
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const { TimepointApi, MeasurementApi } = OHIF.measurements;
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const currentTimepointId = 'TimepointId';
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@@ -191,8 +190,11 @@ class Viewer extends Component {
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const patientId = studies[0] && studies[0].patientId;
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timepointApi.retrieveTimepoints({ patientId });
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measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
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if (isStudyLoaded) {
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this.measurementApi.retrieveMeasurements(patientId, [
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currentTimepointId,
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]);
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}
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this.setState({
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thumbnails: _mapStudiesToThumbnails(studies),
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});
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@@ -200,18 +202,19 @@ class Viewer extends Component {
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}
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componentDidUpdate(prevProps) {
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if (this.props.studies !== prevProps.studies) {
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const { studies } = this.props;
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const patientId = studies[0] && studies[0].patientId;
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const currentTimepointId = this.currentTimepointId;
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this.timepointApi.retrieveTimepoints({ patientId });
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this.measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
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const { studies, isStudyLoaded } = this.props;
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if (studies !== prevProps.studies) {
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this.setState({
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thumbnails: _mapStudiesToThumbnails(studies),
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});
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}
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if (isStudyLoaded && isStudyLoaded !== prevProps.isStudyLoaded) {
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const patientId = studies[0] && studies[0].patientId;
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const { currentTimepointId } = this;
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this.timepointApi.retrieveTimepoints({ patientId });
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this.measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
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}
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}
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render() {
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@@ -294,11 +297,11 @@ class Viewer extends Component {
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activeIndex={this.props.activeViewportIndex}
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/>
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) : (
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<ConnectedStudyBrowser
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studies={this.state.thumbnails}
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studyMetadata={this.props.studies}
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/>
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)}
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<ConnectedStudyBrowser
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studies={this.state.thumbnails}
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studyMetadata={this.props.studies}
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/>
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)}
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</SidePanel>
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{/* MAIN */}
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@@ -334,7 +337,7 @@ export default Viewer;
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* @param {Study[]} studies
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* @param {DisplaySet[]} studies[].displaySets
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*/
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const _mapStudiesToThumbnails = function(studies) {
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const _mapStudiesToThumbnails = function (studies) {
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return studies.map(study => {
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const { studyInstanceUid } = study;
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