feat: 🎸 DICOM SR STOW on MeasurementAPI (#954)

* feat: 🎸 DICOM SR STOW on MeasurementAPI

Closes: #758

* feat: 🎸 Adding the dataExchance from DICOM SR

* feat: 🎸 Fix some issues and get the retrieve measurements working

* feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)

* feat: 🎸 Adding a button to start testing SATE functionality

* feat: 🎸Small fixes into the code

* feat: 🎸 MAke sure we get latest SR in the study, even on lazyLoad mode

* Revert "feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)"

This reverts commit 4b3a1efb5810487d2319826fd59c03d779882b5e.

* feat: 🎸 Make sure after sync we update the viewports and also that annotation tools are set to passive, so it can be drawn in the viewports

* feat: 🎸 Remove console logs and start using OHIF.log

* feat: 🎸 Refactor measurement table to use Snackbar service of messages and make sure we only show save button if server type is dicomWeb

* feat: 🎸 Refactor to remove mocked wadoRoot and use server

* Fix to expose error once we can't save the SR

* Update DCMJS into latest dev version

* Update dcmjs with latest fixes

* Fix PR callouts

* Logging error on MeasurementReport creation

* Preventing from breaking on non supported tools and also warning that some toolType is not sopported

* Small error message update

* Expose better the errors and when we have unsopported tools into the measurements

* Renaming variable

* Expose dcmjs tool support check

* Change the way we warn the unsupportedTools

* Adding style to the button

* Small change on button style

* Fix git conflicts

* Fix after merge with latest master

* Fix after merge with master, btn was not clickable

* Fixing callouts

* Adding util functions into files and refactor with JSDocs

* Refactoring code, adding some basic JSDocs

* Bump dcmjs with latest version and fixes

* JSDocs and small refactors

* yarn lock file after dcmjs update

* Remove unused parameters

* Registering a plain copy of server into measurementAPI

* Small refactor

* Start changing from toolType to toolName

* Rename a function to get instanceMetadata

* Adding error if server is not DICOMWeb on retrieve

* Move snackbar outside of UI component and use UINotificationService

* Refactor and JSDocs

* Small fixes on JSDocs (style)

* Remove unused import

* Improve JSDocs on MeasurementApi

* Remove refactor leftover

* Improve JSDocs and propTypes

* JSDocs and small refactors
This commit is contained in:
Gustavo André Lelis authored and Danny Brown committed 2019-12-11 11:14:01 -05:00
1 parent 5cda5159da
commit ebe1af8d4f
25 files changed
+772 -133

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@@ -11,6 +11,7 @@ import ConnectedStudyBrowser from './ConnectedStudyBrowser.js';
import ConnectedViewerMain from './ConnectedViewerMain.js';
import SidePanel from './../components/SidePanel.js';
import { extensionManager } from './../App.js';
import DICOMSR from '../lib/DICOMSR';
// Contexts
import WhiteLabellingContext from '../context/WhiteLabellingContext.js';
@@ -57,21 +58,31 @@ class Viewer extends Component {
static propTypes = {
studies: PropTypes.array,
studyInstanceUids: PropTypes.array,
activeServer: PropTypes.shape({
type: PropTypes.string,
wadoRoot: PropTypes.string,
}),
onTimepointsUpdated: PropTypes.func,
onMeasurementsUpdated: PropTypes.func,
// window.store.getState().viewports.viewportSpecificData
viewports: PropTypes.object.isRequired,
// window.store.getState().viewports.activeViewportIndex
activeViewportIndex: PropTypes.number.isRequired,
isStudyLoaded: PropTypes.bool,
};
constructor(props) {
super(props);
const { activeServer } = this.props;
const server = Object.assign({}, activeServer);
OHIF.measurements.MeasurementApi.setConfiguration({
dataExchange: {
retrieve: this.retrieveMeasurements,
store: this.storeMeasurements,
retrieve: DICOMSR.retrieveMeasurements,
store: DICOMSR.storeMeasurements,
},
server,
});
OHIF.measurements.TimepointApi.setConfiguration({
@@ -93,18 +104,6 @@ class Viewer extends Component {
thumbnails: [],
};
retrieveMeasurements = (patientId, timepointIds) => {
OHIF.log.info('retrieveMeasurements');
// TODO: Retrieve the measurements from the latest available SR
return Promise.resolve();
};
storeMeasurements = (measurementData, timepointIds) => {
OHIF.log.info('storeMeasurements');
// TODO: Store the measurements into a new SR sent to the active server
return Promise.resolve();
};
retrieveTimepoints = filter => {
OHIF.log.info('retrieveTimepoints');
@@ -171,7 +170,7 @@ class Viewer extends Component {
};
componentDidMount() {
const { studies } = this.props;
const { studies, isStudyLoaded } = this.props;
const { TimepointApi, MeasurementApi } = OHIF.measurements;
const currentTimepointId = 'TimepointId';
@@ -191,8 +190,11 @@ class Viewer extends Component {
const patientId = studies[0] && studies[0].patientId;
timepointApi.retrieveTimepoints({ patientId });
measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
if (isStudyLoaded) {
this.measurementApi.retrieveMeasurements(patientId, [
currentTimepointId,
]);
}
this.setState({
thumbnails: _mapStudiesToThumbnails(studies),
});
@@ -200,18 +202,19 @@ class Viewer extends Component {
}
componentDidUpdate(prevProps) {
if (this.props.studies !== prevProps.studies) {
const { studies } = this.props;
const patientId = studies[0] && studies[0].patientId;
const currentTimepointId = this.currentTimepointId;
this.timepointApi.retrieveTimepoints({ patientId });
this.measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
const { studies, isStudyLoaded } = this.props;
if (studies !== prevProps.studies) {
this.setState({
thumbnails: _mapStudiesToThumbnails(studies),
});
}
if (isStudyLoaded && isStudyLoaded !== prevProps.isStudyLoaded) {
const patientId = studies[0] && studies[0].patientId;
const { currentTimepointId } = this;
this.timepointApi.retrieveTimepoints({ patientId });
this.measurementApi.retrieveMeasurements(patientId, [currentTimepointId]);
}
}
render() {
@@ -294,11 +297,11 @@ class Viewer extends Component {
activeIndex={this.props.activeViewportIndex}
/>
) : (
<ConnectedStudyBrowser
studies={this.state.thumbnails}
studyMetadata={this.props.studies}
/>
)}
<ConnectedStudyBrowser
studies={this.state.thumbnails}
studyMetadata={this.props.studies}
/>
)}
</SidePanel>
{/* MAIN */}
@@ -334,7 +337,7 @@ export default Viewer;
* @param {Study[]} studies
* @param {DisplaySet[]} studies[].displaySets
*/
const _mapStudiesToThumbnails = function(studies) {
const _mapStudiesToThumbnails = function (studies) {
return studies.map(study => {
const { studyInstanceUid } = study;