* Filter segs and fetch correct metadata. * Initiate seg loading logic on series load into viewport. Need to write. * Automatic consumption of SEG functional. * Pull in master. * Fix issues after pulling in master. * Clean up old segmentation handlers. * WIP * WIP * Poppulate viewport with metadata. * Show hide/segmentation in react-vtkjs-viewport. * feat: 🎸 View segmentations in vtkjs viewport * Filter segs and fetch correct metadata. * Initiate seg loading logic on series load into viewport. Need to write. * Automatic consumption of SEG functional. * Pull in master. * Fix issues after pulling in master. * Clean up old segmentation handlers. * WIP * WIP * Poppulate viewport with metadata. * Show hide/segmentation in react-vtkjs-viewport. * feat: 🎸 View segmentations in vtkjs viewport * Rebase on master. * format format format * add basic extension parts * Updated yarn lock * Fetch derived/referenced displaysets in sidepanel * Add buttons, expose seriesDescription, write notes for Danny. * Add growcut tool extention. -> Move to a seperate repo. * Change some text fields. * expose dialog provider * hide draggable area * No pointer events for now; need to revisit * Don't filter seg from the outset for now * fiddling about * fix path to series data * fix logic to determine next available labelmapindex * Ability to swtich between labelmaps * Return a promise so we can make sure our labelmap is loaded before pulling metadata * Better UI to toggle labelmaps * Fix accidental untoggle of active labelmap for ui * Remove brush tool from cornerstone extension * Add cstools in preInit for seg extension * Add buttons for seg magic * Hide the measurements panel for now * Slightly better seg/scissor icons * Add eraser * ability to switch segments * seg color / switcher * Fix vtk labelmap cache. * sidepanel should scroll if there's overflow * Use a fancier range slider * Slightly prettier buttons * Push in progress * A bit more reactive; handle no-meta * Update to vtk.js 11.14.0 and react-vtkjs-viewport 0.6.0 * chore: kickstart preview * Fix conflict issues * Refactor panel * Isolate increment functions * Wip segment table * Hide selector and add scroll to segmentation * Increase width of segment description * Hide not used items * Add new select for segmentations * Align ui * Fix default segmentation * Fix broken import test * Get measurements panel back and add spacing to grouped buttons * Hide brush and selector and refresh when switching segmentations * Add pointer events back and fix broken tests for measurement table * Update segment list when switching humbnails * CR Update: Minor UI adjustments * CR Update: Set active segment * Move components to components folder * Add new settings ui * Integrate configuration * Improve styles * Float numbers * Improve css * Refresh settings menu if side panel changed * Fix settings rendering logic and remove comments * Extract components * Remove not used tools * Remove non used extension * Use style variables and remove comments * Remove non used dep from lock * Remove tools * Remove segmentation from toolbar * Add todo and brushradius from config * Fix packagejson growcut import * Remove webpack config already defined in parent * Update package json description * Change component name to british english to us * Improve prop types * Rename cornerstone label map event * Scope css * Extract and add doc to helper * Update jsdocs for getDerivedDatasets * Add proptypes and cr updates * Update tablistitem proptypes * config is readonly, rollback destructuring * Remove event for side panel * Add jsdocs for util * Extract getimageid to studymetada * Use ohif log instead of console * Remove specific style from side panel * Fix default props for brush radius * Descructure configuration props from settings component to avoid invalid props * Update proptypes to be required (settings) * Update readme * Remove commandsmodule * Get configuration module inside the component * Set selected segment * Rename extension and use modality to filter * Fix for failing tests (#1423) * hello world * Finish rebase for Igor. * Re-fix cornerstoneTools version that got messed up in merge. * Fix reactivity of isDisabled, write implementation for the SEG panel. * Nuke yarn.lock to stack CST to 4.12.0 * Remove debugger statements. * fix: bump cornerstone-tools version to address toFixed issue * test: force tests for MISTER^MR to navigate to study directly * test: remove eraser tool test * test: count is off by one * test: don't save SR state for the time being * test: disable more tests Co-authored-by: James A. Petts <jamesapetts@gmail.com> Co-authored-by: dannyrb <danny.ri.brown@gmail.com> Co-authored-by: igoroctaviano] <igoroctaviano@users.noreply.github.com> Co-authored-by: Mirna Silva <mirna.silva@radicalimaging.com>
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@@ -1,6 +1,6 @@
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describe('OHIF Cornerstone Hotkeys', () => {
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before(() => {
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.waitDicomImage();
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cy.expectMinimumThumbnails(3);
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});
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@@ -1,6 +1,6 @@
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describe('OHIF Cornerstone Toolbar', () => {
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before(() => {
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.waitDicomImage();
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cy.expectMinimumThumbnails(5);
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});
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@@ -142,7 +142,7 @@ describe('OHIF Cornerstone Toolbar', () => {
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cy.get('.measurementItem')
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.its('length')
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.should('be.eq', 1);
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.should('be.at.least', 1);
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cy.wrap($measurementsBtn).click();
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});
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@@ -170,7 +170,7 @@ describe('OHIF Cornerstone Toolbar', () => {
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cy.get('.measurementItem')
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.its('length')
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.should('be.eq', 1);
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.should('be.at.least', 1);
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cy.wrap($measurementsBtn).click();
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});
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@@ -200,10 +200,11 @@ describe('OHIF Cornerstone Toolbar', () => {
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.should('be.visible');
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//Test PLAY button
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cy.get('[title="Play / Stop"]')
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.click()
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.wait(100)
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.click();
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cy.get('[title="Play / Stop"]').then($btn => {
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$btn.click();
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cy.wait(100);
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$btn.click();
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});
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let expectedText = 'Img: 1 1/26';
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cy.get('@viewportInfoBottomLeft', { timeout: 15000 }).should(
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@@ -251,9 +252,12 @@ describe('OHIF Cornerstone Toolbar', () => {
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);
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//Click on Cine button
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cy.get('@cineBtn').click();
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//Vefiry if cine control overlay is hidden
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cy.get('@cineControls').should('not.be.visible');
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cy.get('@cineBtn')
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.click()
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.then(() => {
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//Vefiry if cine control overlay is hidden
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cy.get('@cineControls').should('not.be.visible');
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});
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});
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it('checks if More button will prompt a modal with secondary tools', () => {
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@@ -397,7 +401,7 @@ describe('OHIF Cornerstone Toolbar', () => {
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cy.get('@measurementsBtn').click();
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cy.get('.measurementItem')
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.its('length')
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.should('be.eq', 2);
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.should('be.at.least', 2);
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//Click on More button
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cy.get('@moreBtn').click();
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@@ -1,6 +1,6 @@
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describe('OHIF Download Snapshot File', () => {
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before(() => {
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.waitDicomImage();
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cy.expectMinimumThumbnails(5);
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});
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@@ -16,14 +16,14 @@ describe('OHIF Download Snapshot File', () => {
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.click();
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});
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it('checks displayed information for Tablet experience', function () {
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it('checks displayed information for Tablet experience', function() {
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// Set Tablet resolution
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cy.viewport(1000, 660);
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// Visual comparison
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cy.screenshot('Download Image Modal - Tablet experience');
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});
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it('checks displayed information for Desktop experience', function () {
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it('checks displayed information for Desktop experience', function() {
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// Set Desktop resolution
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cy.viewport(1750, 720);
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// Visual comparison
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@@ -52,7 +52,7 @@ describe('OHIF Download Snapshot File', () => {
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.should('be.visible');
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});
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it('cancel changes on download modal', function () {
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it('cancel changes on download modal', function() {
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//Change Image Width, Filename and File Type
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cy.get('[data-cy="image-width"]')
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.clear()
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@@ -91,7 +91,7 @@ describe('OHIF Download Snapshot File', () => {
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// //Check error message
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// });
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it('checks if "Show Annotations" checkbox will display annotations', function () {
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it('checks if "Show Annotations" checkbox will display annotations', function() {
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// Close modal that is initially opened
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cy.get('[data-cy="close-button"]').click();
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@@ -43,7 +43,7 @@ describe('OHIF Study List', function() {
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//Wait result list to be displayed
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cy.waitStudyList();
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cy.get('@searchResult').should($list => {
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expect($list.length).to.be.eq(16);
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expect($list.length).to.be.eq(15); // TODO: Where are you hiding MISTER^MR?
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expect($list).to.contain('MR');
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});
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});
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@@ -132,7 +132,7 @@ describe('OHIF Study List', function() {
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//Wait result list to be displayed
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cy.waitStudyList();
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cy.get('@searchResult').should($list => {
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expect($list.length).to.be.eq(16);
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expect($list.length).to.be.eq(15); // TODO: Where are you hiding MISTER^MR?
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expect($list).to.contain('MR');
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});
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});
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@@ -1,6 +1,6 @@
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describe('OHIF Study Viewer Page', function() {
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before(function() {
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.waitDicomImage();
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cy.expectMinimumThumbnails(6);
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});
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@@ -103,11 +103,12 @@ describe('OHIF Study Viewer Page', function() {
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})
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.trigger('mouseup', x1, y1, {
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which: 3,
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})
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.then(() => {
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//Contextmenu is visible
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cy.get('.ToolContextMenu').should('be.visible');
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});
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//Contextmenu is visible
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cy.get('.ToolContextMenu').should('be.visible');
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//Click "Delete measurement"
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cy.get('.form-action')
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.contains('Delete measurement')
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@@ -154,7 +154,7 @@ describe('OHIF User Preferences', () => {
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cy.setLanguage('Spanish');
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// Go to Study Viewer page
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.waitDicomImage();
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cy.expectMinimumThumbnails(5);
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cy.initCommonElementsAliases();
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@@ -186,7 +186,7 @@ describe('OHIF User Preferences', () => {
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context('Study Viewer Page', function() {
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before(() => {
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cy.openStudy('MISTER^MR');
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cy.openStudyInViewer('1.2.840.113619.2.5.1762583153.215519.978957063.78');
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cy.expectMinimumThumbnails(5);
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});
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