TrizTech/ohif-viewer
18
0 Fork 0
Code Issues Pull Requests Actions 1 Packages Projects Releases Wiki Activity

feat: cornerstone3D stack and volume viewports (#2787)

Browse Source 
* feat: cs3d working stack viewport and tools (#19)

* Squashed everything

* fix weird react issue

* fix eslint / prettier stuff

* thumbnails work now with cpu rendering

* feat: use new loadImageToCanvas in cs3d

* make jump to measurement work

* fix active thumbnail

* fix measurement delete

* fix window level presets

* remove segmentation and sync groups for now

* fix the dicom pdf and dicom video

* fix cornerstone window assignment for cypress

* apply review comments

Co-authored-by: Erik <erik.sweed@gmail.com>

* feat: cs3d tools and toolGroups (#20)

* add more tools to work with cs3d mode

* fix hotkeys

* add stack manager usage for stach viewports

* add image scrollbar

* wip viewport overlay

* fix toAnnotation schema for tools

* fix the unnecessary size change that triggered resize

* hanging protocol improvement to allow unmatched errors

* study description matching for hanging protocol

* fix the displaysetOptions to work

* fix handle the active tool when a new viewport is added

* fix separate toolGroups for mode

* apply review comments

* apply review comments

* yarn lock

* feat: overlay component (#21)

* fix default displayset options

* add viewport overlay

* apply review comments

* feat: loading and orientation indicators (#22)

* add loading indicator

* add orientation marker initial work

* apply review comments

* fix: orientation markers (#23)

* finished the orientation markers

* fix various broken cypress tests

* apply review comments

* update yarn lock

* feat: re-working measurement tracking mode with cornerstone3d (#2805)

* feat: cs3d working stack viewport and tools (#19)

* Squashed everything

* fix weird react issue

* fix eslint / prettier stuff

* thumbnails work now with cpu rendering

* feat: use new loadImageToCanvas in cs3d

* make jump to measurement work

* fix active thumbnail

* fix measurement delete

* fix window level presets

* remove segmentation and sync groups for now

* fix the dicom pdf and dicom video

* fix cornerstone window assignment for cypress

* apply review comments

Co-authored-by: Erik <erik.sweed@gmail.com>

* feat: Add Measurement tracking mode with cs3D (#2789)

* feat: first render for cornerstone3d tracked viewport

* make tool active work

* wip for SR extension

* renamed dicom sr to cornerstone dicom sr

* remove cornerstone from dicom pdf and video

* move dicom sr logic to sr extension

* feat: Add hydration for the length tool

* fix SR display tool for length using cs3d

* fix default config

* fix: various bugs with sr viewport and tracking

* fix promptying to continue tracking for when SR is created

* feat: add keep trackign of unique identifiers

* fix hydration for same imageIds

* feat: Add SR toolGroup creation on modeEnter

* feat: remove the need for separate mapper for SR hydration

* add SR display for ellipse

* handle hydration of elliptical ROI tool

* remove cornerstone extension

* add arrow mapping

* feat: Add ArrowAnnotate SR display and hydration

* apply review comments

* apply review comments

* move viewport labels to the viewportData

* apply review comments

* fix: integration cypress tests with cornerstone3D and add CINE tool (#2795)

* fix: integration cypress tests with cornerstone3D

* revert to addOrUpdate as it makes more sense

* fix local drag and drop

* fix tests

* move dicomLoaderService to cornerstone extension

* fix various import bugs

* fix bug for local PT series

* fix various unit tests

* bump cs3d versions

* add angle and magnify tool

* bump dependencies to avoid broken peerDeps

* feat: add initial work for capture using cs3d

* feat: show annotations on the image capture

* feat: add svg layer export

* feat: Add CINE Tool

* feat: remove unnecessary viewport rendering for cine state changes

Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>

* docs: modify and improve documentation (#2800)

* cleanup docs versionings

* feat: Add all version explanations

* version docs for 3.0

* wip for changing docs

* wip for updated docs

* add utility module documentation

* fix demo with nohoisting of history

* add slides and video to resources

* apply review comments

* fix: drag and drop SR into SR viewport (#2803)

* update yarn lock

Co-authored-by: Erik <erik.sweed@gmail.com>

* update pathnames to match v3-stable

* update the e2e pathname

* fix: various bugs with regard to tracking workflow (#2811)

* fix: various issues with measurement panel

* fix: update default tool style for annotations

* fix: annotatoin label getting removed

* feat: Add backward compatibility for SR hydration with legacy cornerstone

* fix: cursors and ellipse ROI max style

* fix: ArrowAnnotate SRDisplay

* apply review comments

* bump package versions

* fix: bugin rehydration of SR

* fix: e2e tests

* fix active viewport thickness and arrowTool ui

* add readme for measurement tracking

* use uploaded image for readme

* add back images

* try to fix e2e test

* fix: window level presets hotkeys

* Update README.md

* update yarn lock

* feat: volume api and TMTV mode (#2817)

* feat: volumeAPI and TMTV mode

* feat: use cs3d cache service to obtain viewportData

* wip for volume api

* wip: fusion viewport

* feat: add blend mode option

* wip for image scrollbar

* fix drag and drop thumbnail

* wip for image scrollbar for voluems

* fix: element mismatch bug for scroll

* feat: Add image scrollbar to volumes

* feat: add syncGroups to volume api

* feat: add tmtv mode initial setup

* feat: add initial image options for the stack viewports

* feat: Add custom load strategy for volume viewports via HP

* apply review comments

fix: Jump presets cs3d (#2812)

* feat: Add JumpPreset to OHIF for Cornerstone3D

* fix: accessing viewport service from servicesManager

feat: volume API and TMTV mode (#2814)

* fix: do not display overlays on mip viewports

* feat: add optional disableCommands for toggle buttons

* fix: toggleCrossharis

* feat: config the crosshairs

* feat: add PetSUV Panel for changing metadata

* feat: initial work for the rectangleROIThreshold panel

* wip: measurement service

* roi threshold working

* feat: Add displayText to segmentations

* feat: add remove segmentation

* feat: add csv export

* feat: add RT export for annotations in tmtv mode

* fix: fusion to use pt in tmtv mode and measuremet mappings

* fix: various bugs

* apply review comments

* apply review comments

* feat: add fusion color maps

* add readme to tmtv mode

* Update README.md

* fix: try to fix build

* fix unit tests

* Update README.md

* feat: add about to the panel

* fix: changing strategy in roi panel

* apply review comments

* update package versions

* wip for stackPrefetch

* fix: cornerstone3d hydration and renaming (#2818)

* update readme

* renamed cornerstone extension

* wip for renaming cornerstone3D variables

* wip for renaming cornerstone3D variables

* wip for fixing bugs for SR viewport

* fix: jumpToMeasurement and initial label after hydration

* fix: fileName capitalization

* feat: use the new prefetch stack in the cs3d (#2820)

* feat: use the new prefetch stack in the cs3d

* use viewport scroll api for stack viewport

* fix cine stop when scrollbar changes

* feat: use new prefetch events

* fix loading state to not show repeatedly

* fix: various bugs for tmtv mode thresholding and new icons (#2823)

* feat: make tmtv mode available in worklist

* feat: add new icons for tmtv mode

* feat: add fusion color icon

* fix: parallel scale calculation

* fix: bump Cornerstone to get large image support working

* fix: Fix issues with CPU viewport flipping, including config files

* fix: bump cornerstone to fix magnify tool

* fix: Bump Cornerstone version to fix resetCamera issue in StackViewport

* ci: Add _headers file to enable CORS headers for Netlify Drag/Drop deploys

* fix: WADO-URI was not working. PET Metadata was coming from the wrong place. Fixed some minor React errors

* feat(OHIF):Allow modes and extensions to be added after commpile time. (#2838)

Also works with the compile time add that the existing cli uses, so that both build types work.
Eric and I agreed this doesn't change existing functionality, but is almost entirely build issues/fixes.

* bump: dependency versions to fix hydration bugs (#2848)

* bump: dcmjs version to fix hydration bugs

* try to fix tests

* bump dependency versions

Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
This commit is contained in:
Erik ZieglerAlirezaBill Wallace
 authored and GitHub committed 2022-07-27 12:39:04 -04:00
1 parent 86dcaf6293
commit bd1c38c00c
668 files changed
+41669 -13410
Download Patch File Download Diff File Expand all files Collapse all files

No files matched your search

modes/basic-dev-mode/src/toolbarButtons.js
+331
View File
@@ -0,0 +1,331 @@
// TODO: torn, can either bake this here; or have to create a whole new button type
// Only ways that you can pass in a custom React component for render :l
import {
// ExpandableToolbarButton,
// ListMenu,
WindowLevelMenuItem,
} from '@ohif/ui';
import { defaults } from '@ohif/core';
const { windowLevelPresets } = defaults;
/**
*
* @param {*} type - 'tool' | 'action' | 'toggle'
* @param {*} id
* @param {*} icon
* @param {*} label
*/
function _createButton(type, id, icon, label, commands, tooltip) {
return {
id,
icon,
label,
type,
commands,
tooltip,
};
}
const _createActionButton = _createButton.bind(null, 'action');
const _createToggleButton = _createButton.bind(null, 'toggle');
const _createToolButton = _createButton.bind(null, 'tool');
/**
*
* @param {*} preset - preset number (from above import)
* @param {*} title
* @param {*} subtitle
*/
function _createWwwcPreset(preset, title, subtitle) {
return {
id: preset.toString(),
title,
subtitle,
type: 'action',
commands: [
{
commandName: 'setWindowLevel',
commandOptions: {
...windowLevelPresets[preset],
},
context: 'CORNERSTONE',
},
],
};
}
const toolbarButtons = [
// Measurement
{
id: 'MeasurementTools',
type: 'ohif.splitButton',
props: {
groupId: 'MeasurementTools',
isRadio: true, // ?
// Switch?
primary: _createToolButton(
'Length',
'tool-length',
'Length',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'Length',
},
context: 'CORNERSTONE',
},
],
'Length'
),
secondary: {
icon: 'chevron-down',
label: '',
isActive: true,
tooltip: 'More Measure Tools',
},
items: [
_createToolButton(
'Length',
'tool-length',
'Length',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'Length',
},
context: 'CORNERSTONE',
},
],
'Length Tool'
),
_createToolButton(
'Bidirectional',
'tool-bidirectional',
'Bidirectional',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'Bidirectional',
},
context: 'CORNERSTONE',
},
],
'Bidirectional Tool'
),
_createToolButton(
'EllipticalROI',
'tool-elipse',
'Ellipse',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'EllipticalROI',
},
context: 'CORNERSTONE',
},
],
'Ellipse Tool'
),
],
},
},
// Zoom..
{
id: 'Zoom',
type: 'ohif.radioGroup',
props: {
type: 'tool',
icon: 'tool-zoom',
label: 'Zoom',
commands: [
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'Zoom',
},
context: 'CORNERSTONE',
},
],
},
},
// Window Level + Presets...
{
id: 'WindowLevel',
type: 'ohif.splitButton',
props: {
groupId: 'WindowLevel',
primary: _createToolButton(
'WindowLevel',
'tool-window-level',
'Window Level',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'WindowLevel',
},
context: 'CORNERSTONE',
},
],
'Window Level'
),
secondary: {
icon: 'chevron-down',
label: 'W/L Manual',
isActive: true,
tooltip: 'W/L Presets',
},
isAction: true, // ?
renderer: WindowLevelMenuItem,
items: [
_createWwwcPreset(1, 'Soft tissue', '400 / 40'),
_createWwwcPreset(2, 'Lung', '1500 / -600'),
_createWwwcPreset(3, 'Liver', '150 / 90'),
_createWwwcPreset(4, 'Bone', '80 / 40'),
_createWwwcPreset(5, 'Brain', '2500 / 480'),
],
},
},
// Pan...
{
id: 'Pan',
type: 'ohif.radioGroup',
props: {
type: 'tool',
icon: 'tool-move',
label: 'Pan',
commands: [
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'Pan',
},
context: 'CORNERSTONE',
},
],
},
},
{
id: 'Capture',
type: 'ohif.action',
props: {
icon: 'tool-capture',
label: 'Capture',
type: 'action',
commands: [
{
commandName: 'showDownloadViewportModal',
commandOptions: {},
context: 'CORNERSTONE',
},
],
},
},
{
id: 'Layout',
type: 'ohif.layoutSelector',
},
// More...
{
id: 'MoreTools',
type: 'ohif.splitButton',
props: {
isRadio: true, // ?
groupId: 'MoreTools',
primary: _createActionButton(
'Reset',
'tool-reset',
'Reset View',
[
{
commandName: 'resetViewport',
commandOptions: {},
context: 'CORNERSTONE',
},
],
'Reset'
),
secondary: {
icon: 'chevron-down',
label: '',
isActive: true,
tooltip: 'More Tools',
},
items: [
_createActionButton(
'Reset',
'tool-reset',
'Reset View',
[
{
commandName: 'resetViewport',
commandOptions: {},
context: 'CORNERSTONE',
},
],
'Reset'
),
_createActionButton(
'rotate-right',
'tool-rotate-right',
'Rotate Right',
[
{
commandName: 'rotateViewportCW',
commandOptions: {},
context: 'CORNERSTONE',
},
],
'Rotate +90'
),
_createActionButton(
'flip-horizontal',
'tool-flip-horizontal',
'Flip Horizontally',
[
{
commandName: 'flipViewportHorizontal',
commandOptions: {},
context: 'CORNERSTONE',
},
],
'Flip Horizontal'
),
_createToolButton(
'StackScroll',
'tool-stack-scroll',
'Stack Scroll',
[
{
commandName: 'setToolActive',
commandOptions: {
toolName: 'StackScroll',
},
context: 'CORNERSTONE',
},
],
'Stack Scroll'
),
_createActionButton(
'invert',
'tool-invert',
'Invert',
[
{
commandName: 'invertViewport',
commandOptions: {},
context: 'CORNERSTONE',
},
],
'Invert Colors'
),
],
},
},
];
export default toolbarButtons;