feat: Add DICOM SEG support and MPR, referenceLines and StackSync and more (#3015)
* feat: add initial sop class handler for SEG * feat: move segmentation service * update segmentation service methods * fix: viewport data structure * feat: Add initial render for the DICOM SEG for each displaySet * fix: various wrong architectural dependencies between services * feat: initial separate SEG display in each viewport * feat: refactore viewport action bar * initial work for SEG hydration * fix: various bugs regarding drag and dropping different viewports * fix: rendering issues for multiple seg displaysets * fix: bugs for thumbnail and hydration * feat: fix the initial segment color * update after rebase * feat: initial design for the segmentation group table * feat: initial new design for the segmentation panel * feat: segmentation panel * feat: make segmentation appear on all related viewports * fix: segmentation load bug based on functional groups * initial work for segmentation crosshairs * fix: various stylings and functionality * fix: various stylings for the seg panel * fix: overflow styles * feat: add more ui components * feat: added segmentation config * feat: add jump to segment * feat: add jump to segment for DICOM SEG viewport * fix: bugs after rebase * feat: jump in segmentation viewport * fix: mpr support for seg * feat: add more icons * feat: new icons * feat: add new side panel * feat: add segmentation config * feat: add loading indicator to ohif * feat: make hanging protocols follow matching rules for viewports * feat: enhance drag and drop to be hanging protocol aware * fix: mpr restore previous layout * fix: crosshairs toggle * fix: add auth headers to the dicom loader via dicomwebclient * fix: bug for crosshairs toggle in mpr * fix: seg viewport reusing old toolGroup * feat: add loading animation with lottie * fix: various bugs for Segmentation hydration in mpr * feat: change outline alpha to outline opacity * feat: loading indicator for seg viewport * fix: various segmentation group styles * fix: local mode for seg * feat: add animation for the highlight * fix: loading indicatro to show segment indices * feat: enhance modality drop down ui * fix: panels * fix: download form * fix: layout shift in loading indicator * fix: loading indicator to have correct values * fix: update software number * fix: image jump between MPR and default * fix: segmentation cleanup and cine service cleanup * fix: segmentation toolgroup clena up * fix: highlight interval should not trigger again * fix: issue with multiframe sorting * rename: change onSeriesChange to onArrowsClick * fix: buttons for tmtv and layout shift * fix: various bugs wrt crosshairs * fix: crosshairs re init on reset camera * fix: middle slice calculation different from cs middle reset camera * fix: reset camera should reset viewport camera * fix: loading segments in MPR mode * fix: tmtv hp back to before * fix: layout shift * feat: orientation markers for volume viewport * fix: capture for volume viewports * fix: memory leak for back to worklist * fix: loading bar bg color * fix: side panel for only one panel * fix: react select style in production * fix: various styling for segmentation groups * fix: various ui styles * feat: add new segmentation config styles * fix: hover state for segmentation item * fix: side panel layout shift * temp add panels * try to fix scrollbar for thimbnail * fix: scroll not appearing for side panels * feat: changed styles for scrollbar * feat: add cpu fallback warning * fix: webworker destroy * fix: select styles * fix: orientation marker color and position * fix: capture screenshot for volume viewports * fix: hide segment visibility on mpr * fix: reloading an already loaded seg displayset * feat: add is equal * fix: mpr jump to measurements * apply review comments * fix: optimization for the segmentation load * fix: remove unnecessary context menu and hp service reset * fix: segmentation service wrt brush settings * feat: initial work for the stack synchronization * fix: add validateDisplaySetSelectorsForNewDisplaySets to make sure drag and drop can follow requirements * fix: various react proptypes * fix: thumbnails for the tmtv and change default props to default params * feat: make showing loading indicator configurable and add docs * bump versions and add more docs * fix demo * update cornerstone versions * apply review comments * feat: add reference lines * fix build * fix unit tests * add reference lines icon * fix: e2e tests * fix static wado config * docs: add segmentation service docs * fix: docker build * fix: keep camera and bump versions * Try re-enabling minification to fix deploy previews Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
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import React from 'react';
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import PropTypes from 'prop-types';
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import Icon from '../Icon';
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import SegmentationGroup from './SegmentationGroup';
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import SegmentationConfig from './SegmentationConfig';
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const GetSegmentationConfig = ({
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setFillAlpha,
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setFillAlphaInactive,
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setOutlineWidthActive,
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setRenderFill,
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setRenderInactiveSegmentations,
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setRenderOutline,
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setOutlineOpacityActive,
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segmentationConfig,
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}) => {
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return (
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<SegmentationConfig
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setFillAlpha={setFillAlpha}
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setFillAlphaInactive={setFillAlphaInactive}
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setOutlineWidthActive={setOutlineWidthActive}
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setOutlineOpacityActive={setOutlineOpacityActive}
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setRenderFill={setRenderFill}
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setRenderInactiveSegmentations={setRenderInactiveSegmentations}
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setRenderOutline={setRenderOutline}
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segmentationConfig={segmentationConfig}
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/>
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);
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};
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const SegmentationGroupTable = ({
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segmentations,
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onSegmentationAdd,
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onSegmentationEdit,
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onSegmentationClick,
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onSegmentationDelete,
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showAddSegmentation,
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showAddSegment,
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onSegmentClick,
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onSegmentAdd,
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segmentationConfig,
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onSegmentDelete,
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onSegmentEdit,
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onToggleSegmentationVisibility,
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onToggleSegmentVisibility,
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onSegmentColorClick,
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isMinimized,
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onToggleMinimizeSegmentation,
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setFillAlpha,
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setFillAlphaInactive,
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setOutlineWidthActive,
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setOutlineOpacityActive,
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setRenderFill,
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setRenderInactiveSegmentations,
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setRenderOutline,
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}) => {
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return (
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<div className="font-inter font-[300]">
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<GetSegmentationConfig
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// showAddSegmentation={showAddSegmentation}
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// onSegmentationAdd={onSegmentationAdd}
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segmentationConfig={segmentationConfig}
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setFillAlpha={setFillAlpha}
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setFillAlphaInactive={setFillAlphaInactive}
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setOutlineWidthActive={setOutlineWidthActive}
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setOutlineOpacityActive={setOutlineOpacityActive}
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setRenderFill={setRenderFill}
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setRenderInactiveSegmentations={setRenderInactiveSegmentations}
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setRenderOutline={setRenderOutline}
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/>
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<div className="flex flex-col pr-[1px] mt-1">
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{!!segmentations.length &&
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segmentations.map((segmentation, index) => {
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const {
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id,
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label,
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displayText = [],
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segmentCount,
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segments,
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isVisible,
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isActive,
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activeSegmentIndex,
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} = segmentation;
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return (
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<>
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<SegmentationGroup
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id={id}
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label={label}
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isMinimized={isMinimized[id]}
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segments={segments}
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showAddSegment={showAddSegment}
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segmentCount={segmentCount}
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isActive={isActive}
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isVisible={isVisible}
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onSegmentColorClick={onSegmentColorClick}
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onSegmentationClick={() => onSegmentationClick(id)}
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activeSegmentIndex={activeSegmentIndex}
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onToggleMinimizeSegmentation={onToggleMinimizeSegmentation}
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onSegmentationEdit={onSegmentationEdit}
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onSegmentationDelete={onSegmentationDelete}
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onSegmentClick={onSegmentClick}
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onSegmentEdit={onSegmentEdit}
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onToggleSegmentVisibility={onToggleSegmentVisibility}
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onToggleSegmentationVisibility={
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onToggleSegmentationVisibility
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}
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onSegmentAdd={onSegmentAdd}
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showSegmentDelete={false}
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/>
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<div className="h-2 bg-black"></div>
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</>
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);
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})}
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</div>
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{showAddSegmentation && (
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<div
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className="flex items-center cursor-pointer hover:opacity-80 text-primary-active bg-black text-[12px] pl-1 h-[45px]"
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onClick={() => onSegmentationAdd()}
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>
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<Icon name="row-add" className="w-5 h-5" />
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<div className="pl-1">Add New Segmentation</div>
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</div>
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)}
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</div>
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);
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};
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SegmentationGroupTable.propTypes = {
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title: PropTypes.string.isRequired,
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segmentations: PropTypes.array.isRequired,
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activeSegmentationId: PropTypes.string.isRequired,
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onClick: PropTypes.func.isRequired,
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onEdit: PropTypes.func.isRequired,
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onDelete: PropTypes.func.isRequired,
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onToggleLocked: PropTypes.func,
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onToggleVisibility: PropTypes.func.isRequired,
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onToggleVisibilityAll: PropTypes.func.isRequired,
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segmentationConfig: PropTypes.object,
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};
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SegmentationGroupTable.defaultProps = {
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title: '',
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segmentations: [],
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activeSegmentationId: '',
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onClick: () => {},
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onEdit: () => {},
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onDelete: () => {},
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onToggleLocked: () => {},
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onToggleVisibility: () => {},
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onToggleVisibilityAll: () => {},
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segmentationConfig: {
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initialConfig: {
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fillAlpha: 0.5,
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fillAlphaInactive: 0.5,
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outlineWidthActive: 1,
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outlineOpacity: 1,
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outlineOpacityInactive: 0.5,
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renderFill: true,
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renderInactiveSegmentations: true,
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renderOutline: true,
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},
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usePercentage: true,
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},
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setFillAlpha: () => {},
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setFillAlphaInactive: () => {},
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setOutlineWidthActive: () => {},
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setOutlineOpacityActive: () => {},
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setRenderFill: () => {},
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setRenderInactiveSegmentations: () => {},
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setRenderOutline: () => {},
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};
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export default SegmentationGroupTable;
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