feat: Add DICOM SEG support and MPR, referenceLines and StackSync and more (#3015)
* feat: add initial sop class handler for SEG * feat: move segmentation service * update segmentation service methods * fix: viewport data structure * feat: Add initial render for the DICOM SEG for each displaySet * fix: various wrong architectural dependencies between services * feat: initial separate SEG display in each viewport * feat: refactore viewport action bar * initial work for SEG hydration * fix: various bugs regarding drag and dropping different viewports * fix: rendering issues for multiple seg displaysets * fix: bugs for thumbnail and hydration * feat: fix the initial segment color * update after rebase * feat: initial design for the segmentation group table * feat: initial new design for the segmentation panel * feat: segmentation panel * feat: make segmentation appear on all related viewports * fix: segmentation load bug based on functional groups * initial work for segmentation crosshairs * fix: various stylings and functionality * fix: various stylings for the seg panel * fix: overflow styles * feat: add more ui components * feat: added segmentation config * feat: add jump to segment * feat: add jump to segment for DICOM SEG viewport * fix: bugs after rebase * feat: jump in segmentation viewport * fix: mpr support for seg * feat: add more icons * feat: new icons * feat: add new side panel * feat: add segmentation config * feat: add loading indicator to ohif * feat: make hanging protocols follow matching rules for viewports * feat: enhance drag and drop to be hanging protocol aware * fix: mpr restore previous layout * fix: crosshairs toggle * fix: add auth headers to the dicom loader via dicomwebclient * fix: bug for crosshairs toggle in mpr * fix: seg viewport reusing old toolGroup * feat: add loading animation with lottie * fix: various bugs for Segmentation hydration in mpr * feat: change outline alpha to outline opacity * feat: loading indicator for seg viewport * fix: various segmentation group styles * fix: local mode for seg * feat: add animation for the highlight * fix: loading indicatro to show segment indices * feat: enhance modality drop down ui * fix: panels * fix: download form * fix: layout shift in loading indicator * fix: loading indicator to have correct values * fix: update software number * fix: image jump between MPR and default * fix: segmentation cleanup and cine service cleanup * fix: segmentation toolgroup clena up * fix: highlight interval should not trigger again * fix: issue with multiframe sorting * rename: change onSeriesChange to onArrowsClick * fix: buttons for tmtv and layout shift * fix: various bugs wrt crosshairs * fix: crosshairs re init on reset camera * fix: middle slice calculation different from cs middle reset camera * fix: reset camera should reset viewport camera * fix: loading segments in MPR mode * fix: tmtv hp back to before * fix: layout shift * feat: orientation markers for volume viewport * fix: capture for volume viewports * fix: memory leak for back to worklist * fix: loading bar bg color * fix: side panel for only one panel * fix: react select style in production * fix: various styling for segmentation groups * fix: various ui styles * feat: add new segmentation config styles * fix: hover state for segmentation item * fix: side panel layout shift * temp add panels * try to fix scrollbar for thimbnail * fix: scroll not appearing for side panels * feat: changed styles for scrollbar * feat: add cpu fallback warning * fix: webworker destroy * fix: select styles * fix: orientation marker color and position * fix: capture screenshot for volume viewports * fix: hide segment visibility on mpr * fix: reloading an already loaded seg displayset * feat: add is equal * fix: mpr jump to measurements * apply review comments * fix: optimization for the segmentation load * fix: remove unnecessary context menu and hp service reset * fix: segmentation service wrt brush settings * feat: initial work for the stack synchronization * fix: add validateDisplaySetSelectorsForNewDisplaySets to make sure drag and drop can follow requirements * fix: various react proptypes * fix: thumbnails for the tmtv and change default props to default params * feat: make showing loading indicator configurable and add docs * bump versions and add more docs * fix demo * update cornerstone versions * apply review comments * feat: add reference lines * fix build * fix unit tests * add reference lines icon * fix: e2e tests * fix static wado config * docs: add segmentation service docs * fix: docker build * fix: keep camera and bump versions * Try re-enabling minification to fix deploy previews Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
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@@ -9,74 +9,16 @@ import {
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AboutModal,
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Header,
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useModal,
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LoadingIndicatorProgress,
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} from '@ohif/ui';
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import i18n from '@ohif/i18n';
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import { hotkeys } from '@ohif/core';
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import { useAppConfig } from '@state';
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import Toolbar from '../Toolbar/Toolbar';
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const { availableLanguages, defaultLanguage, currentLanguage } = i18n;
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function Toolbar({ servicesManager }) {
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const { ToolBarService } = servicesManager.services;
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const [toolbarButtons, setToolbarButtons] = useState([]);
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const [buttonState, setButtonState] = useState({
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primaryToolId: '',
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toggles: {},
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groups: {},
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});
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// Could track buttons and state separately...?
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useEffect(() => {
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const { unsubscribe: unsub1 } = ToolBarService.subscribe(
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ToolBarService.EVENTS.TOOL_BAR_MODIFIED,
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() => setToolbarButtons(ToolBarService.getButtonSection('primary'))
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);
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const { unsubscribe: unsub2 } = ToolBarService.subscribe(
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ToolBarService.EVENTS.TOOL_BAR_STATE_MODIFIED,
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() => setButtonState({ ...ToolBarService.state })
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);
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return () => {
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unsub1();
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unsub2();
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};
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}, [ToolBarService]);
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return (
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<>
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{toolbarButtons.map((toolDef, index) => {
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const { id, Component, componentProps } = toolDef;
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// TODO: ...
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// isActive if:
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// - id is primary?
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// - id is in list of "toggled on"?
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let isActive;
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if (componentProps.type === 'toggle') {
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isActive = buttonState.toggles[id];
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}
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// Also need... to filter list for splitButton, and set primary based on most recently clicked
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// Also need to kill the radioGroup button's magic logic
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// Everything should be reactive off these props, so commands can inform ToolbarService
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// These can... Trigger toolbar events based on updates?
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// Then sync using useEffect, or simply modify the state here?
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return (
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<Component
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key={id}
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id={id}
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{...componentProps}
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bState={buttonState}
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isActive={isActive}
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onInteraction={args => ToolBarService.recordInteraction(args)}
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/>
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);
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})}
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</>
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);
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}
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function ViewerLayout({
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// From Extension Module Params
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extensionManager,
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@@ -84,12 +26,12 @@ function ViewerLayout({
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hotkeysManager,
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commandsManager,
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// From Modes
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leftPanels,
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rightPanels,
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leftPanelDefaultClosed,
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rightPanelDefaultClosed,
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viewports,
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ViewportGridComp,
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leftPanels = [],
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rightPanels = [],
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leftPanelDefaultClosed = false,
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rightPanelDefaultClosed = false,
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}) {
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const [appConfig] = useAppConfig();
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const navigate = useNavigate();
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@@ -101,6 +43,12 @@ function ViewerLayout({
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const { t } = useTranslation();
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const { show, hide } = useModal();
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const [showLoadingIndicator, setShowLoadingIndicator] = useState(
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appConfig.showLoadingIndicator
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);
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const { HangingProtocolService } = servicesManager.services;
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const { hotkeyDefinitions, hotkeyDefaults } = hotkeysManager;
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const versionNumber = process.env.VERSION_NUMBER;
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const buildNumber = process.env.BUILD_NUM;
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@@ -153,8 +101,10 @@ function ViewerLayout({
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title: t('Header:Logout'),
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icon: 'power-off',
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onClick: async () => {
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navigate(`/logout?redirect_uri=${encodeURIComponent(window.location.href)}`);
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}
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navigate(
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`/logout?redirect_uri=${encodeURIComponent(window.location.href)}`
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);
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},
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});
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}
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@@ -186,6 +136,25 @@ function ViewerLayout({
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};
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};
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useEffect(() => {
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const { unsubscribe } = HangingProtocolService.subscribe(
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HangingProtocolService.EVENTS.HANGING_PROTOCOL_APPLIED_FOR_VIEWPORT,
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// Todo: right now to set the loading indicator to false, we need to wait for the
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// HangingProtocolService to finish applying the viewport matching to each viewport,
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// however, this might not be the only approach to set the loading indicator to false. we need to explore this further.
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({ progress }) => {
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if (progress === 100) {
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setShowLoadingIndicator(false);
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}
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}
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);
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return () => {
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unsubscribe();
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};
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}, [HangingProtocolService]);
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const getViewportComponentData = viewportComponent => {
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const entry = extensionManager.getModuleEntry(viewportComponent.namespace);
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@@ -213,44 +182,45 @@ function ViewerLayout({
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</ErrorBoundary>
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</Header>
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<div
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className="bg-black flex flex-row items-stretch w-full overflow-hidden flex-nowrap"
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className="bg-black flex flex-row items-stretch w-full overflow-hidden flex-nowrap relative"
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style={{ height: 'calc(100vh - 52px' }}
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>
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{/* LEFT SIDEPANELS */}
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{leftPanelComponents.length ? (
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<ErrorBoundary context="Left Panel">
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<SidePanel
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side="left"
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defaultComponentOpen={
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leftPanelDefaultClosed ? null : leftPanelComponents[0].name
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}
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childComponents={leftPanelComponents}
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/>
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</ErrorBoundary>
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) : null}
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{/* TOOLBAR + GRID */}
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<div className="flex flex-col flex-1 h-full">
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<div className="flex items-center justify-center flex-1 h-full overflow-hidden bg-black">
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<ErrorBoundary context="Grid">
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<ViewportGridComp
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servicesManager={servicesManager}
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viewportComponents={viewportComponents}
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commandsManager={commandsManager}
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<React.Fragment>
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{showLoadingIndicator && (
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<LoadingIndicatorProgress className="h-full w-full bg-black" />
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)}
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{/* LEFT SIDEPANELS */}
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{leftPanelComponents.length ? (
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<ErrorBoundary context="Left Panel">
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<SidePanel
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side="left"
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activeTabIndex={leftPanelDefaultClosed ? null : 0}
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tabs={leftPanelComponents}
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/>
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</ErrorBoundary>
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) : null}
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{/* TOOLBAR + GRID */}
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<div className="flex flex-col flex-1 h-full">
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<div className="flex items-center justify-center flex-1 h-full overflow-hidden bg-black relative">
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<ErrorBoundary context="Grid">
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<ViewportGridComp
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servicesManager={servicesManager}
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viewportComponents={viewportComponents}
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commandsManager={commandsManager}
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/>
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</ErrorBoundary>
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</div>
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</div>
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</div>
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{rightPanelComponents.length ? (
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<ErrorBoundary context="Right Panel">
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<SidePanel
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side="right"
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defaultComponentOpen={
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rightPanelDefaultClosed ? null : rightPanelComponents[0].name
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}
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childComponents={rightPanelComponents}
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/>
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</ErrorBoundary>
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) : null}
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{rightPanelComponents.length ? (
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<ErrorBoundary context="Right Panel">
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<SidePanel
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side="right"
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activeTabIndex={rightPanelDefaultClosed ? null : 0}
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tabs={rightPanelComponents}
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/>
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</ErrorBoundary>
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) : null}
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</React.Fragment>
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</div>
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</div>
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);
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@@ -271,11 +241,4 @@ ViewerLayout.propTypes = {
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children: PropTypes.oneOfType([PropTypes.node, PropTypes.func]).isRequired,
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};
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ViewerLayout.defaultProps = {
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leftPanels: [],
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rightPanels: [],
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leftPanelDefaultClosed: false,
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rightPanelDefaultClosed: false,
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};
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export default ViewerLayout;
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