fix: OHIF 3.9 Recovery 3 (#4697)
Co-authored-by: Ibrahim <93064150+IbrahimCSAE@users.noreply.github.com> Co-authored-by: Bill Wallace <wayfarer3130@gmail.com> Co-authored-by: Chao Sui <chao.sui@curvebeamai.com> Co-authored-by: Jaseel-trenser <108331536+Jaseel-trenser@users.noreply.github.com>
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@@ -1,4 +1,5 @@
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import { vec3 } from 'gl-matrix';
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import { dicomSplit } from './dicomSplit';
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/**
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* Combine the Per instance frame data, the shared frame data
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@@ -15,24 +16,13 @@ const combineFrameInstance = (frame, instance) => {
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PerFrameFunctionalGroupsSequence,
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SharedFunctionalGroupsSequence,
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NumberOfFrames,
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SpacingBetweenSlices,
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ImageType,
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} = instance;
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instance.ImageType = dicomSplit(ImageType);
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if (PerFrameFunctionalGroupsSequence || NumberOfFrames > 1) {
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const frameNumber = Number.parseInt(frame || 1);
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const shared = SharedFunctionalGroupsSequence
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? Object.values(SharedFunctionalGroupsSequence[0])
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.filter(Boolean)
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.map(it => it[0])
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.filter(it => typeof it === 'object')
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: [];
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const perFrame = PerFrameFunctionalGroupsSequence
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? Object.values(PerFrameFunctionalGroupsSequence[frameNumber - 1])
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.filter(Boolean)
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.map(it => it[0])
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.filter(it => typeof it === 'object')
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: [];
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// this is to fix NM multiframe datasets with position and orientation
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// information inside DetectorInformationSequence
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@@ -44,8 +34,12 @@ const combineFrameInstance = (frame, instance) => {
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let ImagePositionPatientToUse = instance.ImagePositionPatient;
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if (!instance.ImagePositionPatient && instance.DetectorInformationSequence) {
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const imagePositionPatient = instance.DetectorInformationSequence[0].ImagePositionPatient;
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const imageOrientationPatient = instance.ImageOrientationPatient;
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let imagePositionPatient = instance.DetectorInformationSequence[0].ImagePositionPatient;
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let imageOrientationPatient = instance.ImageOrientationPatient;
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imagePositionPatient = imagePositionPatient.map(it => Number(it));
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imageOrientationPatient = imageOrientationPatient.map(it => Number(it));
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const SpacingBetweenSlices = Number(instance.SpacingBetweenSlices);
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// Calculate the position for the current frame
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if (imageOrientationPatient && SpacingBetweenSlices) {
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@@ -73,27 +67,77 @@ const combineFrameInstance = (frame, instance) => {
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ImagePositionPatientToUse = [position[0], position[1], position[2]];
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}
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}
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console.debug('🚀 ~ ImagePositionPatientToUse:', ImagePositionPatientToUse);
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const newInstance = Object.assign(instance, { frameNumber: frameNumber });
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// merge the shared first then the per frame to override
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[...shared, ...perFrame].forEach(item => {
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Object.entries(item).forEach(([key, value]) => {
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newInstance[key] = value;
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// Cache the _parentInstance at the top level as a full copy to prevent
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// setting values hard.
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if (!instance._parentInstance) {
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Object.defineProperty(instance, '_parentInstance', {
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value: { ...instance },
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});
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});
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}
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const sharedInstance = createCombinedValue(
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instance._parentInstance,
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SharedFunctionalGroupsSequence?.[0],
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'_shared'
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);
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const newInstance = createCombinedValue(
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sharedInstance,
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PerFrameFunctionalGroupsSequence?.[frameNumber - 1],
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frameNumber
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);
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// Todo: we should cache this combined instance somewhere, maybe add it
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// back to the dicomMetaStore so we don't have to do this again.
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return {
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...newInstance,
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ImagePositionPatient: ImagePositionPatientToUse ??
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newInstance.ImagePositionPatient ?? [0, 0, frameNumber],
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};
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newInstance.ImagePositionPatient = ImagePositionPatientToUse ??
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newInstance.ImagePositionPatient ?? [0, 0, frameNumber];
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Object.defineProperty(newInstance, 'frameNumber', {
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value: frameNumber,
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writable: true,
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enumerable: true,
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configurable: true,
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});
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return newInstance;
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} else {
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return instance;
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}
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};
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/**
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* Creates a combined instance stored in the parent object which
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* inherits from the parent instance the attributes in the functional groups.
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* The storage key in the parent is in key
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*/
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function createCombinedValue(parent, functionalGroups, key) {
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if (parent[key]) {
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return parent[key];
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}
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// Exclude any proxying values
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const newInstance = Object.create(parent);
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Object.defineProperty(parent, key, {
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value: newInstance,
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writable: false,
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enumerable: false,
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});
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if (!functionalGroups) {
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return newInstance;
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}
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const shared = functionalGroups
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? Object.values(functionalGroups)
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.filter(Boolean)
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.map(it => it[0])
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.filter(it => typeof it === 'object')
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: [];
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// merge the shared first then the per frame to override
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[...shared].forEach(item => {
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if (item.SOPInstanceUID) {
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// This sub-item is a previous value information item, so don't merge it
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return;
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}
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Object.entries(item).forEach(([key, value]) => {
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newInstance[key] = value;
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});
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});
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return newInstance;
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}
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export default combineFrameInstance;
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