fix: OHIF 3.9 Recovery 3 (#4697)

Co-authored-by: Ibrahim <93064150+IbrahimCSAE@users.noreply.github.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
Co-authored-by: Chao Sui <chao.sui@curvebeamai.com>
Co-authored-by: Jaseel-trenser <108331536+Jaseel-trenser@users.noreply.github.com>
This commit is contained in:
authored and GitHub committed 2025-01-21 10:07:43 -05:00
1 parent b19d7af9ff
commit 5d4f2e2a8e
35 files changed
+238 -204

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+75 -31
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@@ -1,4 +1,5 @@
import { vec3 } from 'gl-matrix';
import { dicomSplit } from './dicomSplit';
/**
* Combine the Per instance frame data, the shared frame data
@@ -15,24 +16,13 @@ const combineFrameInstance = (frame, instance) => {
PerFrameFunctionalGroupsSequence,
SharedFunctionalGroupsSequence,
NumberOfFrames,
SpacingBetweenSlices,
ImageType,
} = instance;
instance.ImageType = dicomSplit(ImageType);
if (PerFrameFunctionalGroupsSequence || NumberOfFrames > 1) {
const frameNumber = Number.parseInt(frame || 1);
const shared = SharedFunctionalGroupsSequence
? Object.values(SharedFunctionalGroupsSequence[0])
.filter(Boolean)
.map(it => it[0])
.filter(it => typeof it === 'object')
: [];
const perFrame = PerFrameFunctionalGroupsSequence
? Object.values(PerFrameFunctionalGroupsSequence[frameNumber - 1])
.filter(Boolean)
.map(it => it[0])
.filter(it => typeof it === 'object')
: [];
// this is to fix NM multiframe datasets with position and orientation
// information inside DetectorInformationSequence
@@ -44,8 +34,12 @@ const combineFrameInstance = (frame, instance) => {
let ImagePositionPatientToUse = instance.ImagePositionPatient;
if (!instance.ImagePositionPatient && instance.DetectorInformationSequence) {
const imagePositionPatient = instance.DetectorInformationSequence[0].ImagePositionPatient;
const imageOrientationPatient = instance.ImageOrientationPatient;
let imagePositionPatient = instance.DetectorInformationSequence[0].ImagePositionPatient;
let imageOrientationPatient = instance.ImageOrientationPatient;
imagePositionPatient = imagePositionPatient.map(it => Number(it));
imageOrientationPatient = imageOrientationPatient.map(it => Number(it));
const SpacingBetweenSlices = Number(instance.SpacingBetweenSlices);
// Calculate the position for the current frame
if (imageOrientationPatient && SpacingBetweenSlices) {
@@ -73,27 +67,77 @@ const combineFrameInstance = (frame, instance) => {
ImagePositionPatientToUse = [position[0], position[1], position[2]];
}
}
console.debug('🚀 ~ ImagePositionPatientToUse:', ImagePositionPatientToUse);
const newInstance = Object.assign(instance, { frameNumber: frameNumber });
// merge the shared first then the per frame to override
[...shared, ...perFrame].forEach(item => {
Object.entries(item).forEach(([key, value]) => {
newInstance[key] = value;
// Cache the _parentInstance at the top level as a full copy to prevent
// setting values hard.
if (!instance._parentInstance) {
Object.defineProperty(instance, '_parentInstance', {
value: { ...instance },
});
});
}
const sharedInstance = createCombinedValue(
instance._parentInstance,
SharedFunctionalGroupsSequence?.[0],
'_shared'
);
const newInstance = createCombinedValue(
sharedInstance,
PerFrameFunctionalGroupsSequence?.[frameNumber - 1],
frameNumber
);
// Todo: we should cache this combined instance somewhere, maybe add it
// back to the dicomMetaStore so we don't have to do this again.
return {
...newInstance,
ImagePositionPatient: ImagePositionPatientToUse ??
newInstance.ImagePositionPatient ?? [0, 0, frameNumber],
};
newInstance.ImagePositionPatient = ImagePositionPatientToUse ??
newInstance.ImagePositionPatient ?? [0, 0, frameNumber];
Object.defineProperty(newInstance, 'frameNumber', {
value: frameNumber,
writable: true,
enumerable: true,
configurable: true,
});
return newInstance;
} else {
return instance;
}
};
/**
* Creates a combined instance stored in the parent object which
* inherits from the parent instance the attributes in the functional groups.
* The storage key in the parent is in key
*/
function createCombinedValue(parent, functionalGroups, key) {
if (parent[key]) {
return parent[key];
}
// Exclude any proxying values
const newInstance = Object.create(parent);
Object.defineProperty(parent, key, {
value: newInstance,
writable: false,
enumerable: false,
});
if (!functionalGroups) {
return newInstance;
}
const shared = functionalGroups
? Object.values(functionalGroups)
.filter(Boolean)
.map(it => it[0])
.filter(it => typeof it === 'object')
: [];
// merge the shared first then the per frame to override
[...shared].forEach(item => {
if (item.SOPInstanceUID) {
// This sub-item is a previous value information item, so don't merge it
return;
}
Object.entries(item).forEach(([key, value]) => {
newInstance[key] = value;
});
});
return newInstance;
}
export default combineFrameInstance;