feat: new Total Metabolic Tumor Volume tmtv (#2866)

* fix: ptDisplaySet metadata problem

* fix: typo in xhrHeader field

* fix: temporary fix for crosshairs on reload data

* fix hotkey bug for input fields

* upgrade docusarusu to stable release

* circle ci node upgrade

* cypress node upgrade

* bump node in netlify

* bump node version

* remove versioned docs

* update resources

* fix: webpack injection of plugins

* fix meaningful label for panels

* add reviews and fix cli for creation

* copy over chunks if exists in the build

* edit templates

* edit templates

* fix yarn lock

* fix(plugin):Deploy on windows is broken

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

modes/tmtv/README.md

@@ -1,7 +1,5 @@
 # Total Metabolic Tumor Volume
 
-# NOTE: THIS MODE IS STILL A WORK IN PROGRESS
-
 ## Introduction
 
 Total Metabolic Tumor Volume (TMTV) workflow mode enables quantitatively measurement of a tumor volume in a patient's body.

modes/tmtv/src/index.js

@@ -3,7 +3,7 @@ import toolbarButtons from './toolbarButtons.js';
 import { id } from './id.js';
 import initToolGroups, { toolGroupIds } from './initToolGroups.js';
 import setCrosshairsConfiguration from './utils/setCrosshairsConfiguration.js';
-import setEllipticalROIConfiguration from './utils/setEllipticalROIConfiguration.js';
+import setFusionActiveVolume from './utils/setFusionActiveVolume.js';
 
 const ohif = {
   layout: '@ohif/extension-default.layoutTemplateModule.viewerLayout',
@@ -58,7 +58,7 @@ function modeFactory({ modeConfiguration }) {
       // Init Default and SR ToolGroups
       initToolGroups(toolNames, Enums, ToolGroupService, commandsManager);
 
-      const activateWindowLevel = () => {
+      const setWindowLevelActive = () => {
         ToolBarService.recordInteraction({
           groupId: 'WindowLevel',
           itemId: 'WindowLevel',
@@ -97,7 +97,6 @@ function modeFactory({ modeConfiguration }) {
       const { unsubscribe } = ToolGroupService.subscribe(
         ToolGroupService.EVENTS.VIEWPORT_ADDED,
         () => {
-          activateWindowLevel();
           // For fusion toolGroup we need to add the volumeIds for the crosshairs
           // since in the fusion viewport we don't want both PT and CT to render MIP
           // when slabThickness is modified
@@ -110,12 +109,14 @@ function modeFactory({ modeConfiguration }) {
             DisplaySetService
           );
 
-          setEllipticalROIConfiguration(
+          setFusionActiveVolume(
             matches,
             toolNames,
             ToolGroupService,
             DisplaySetService
           );
+
+          setWindowLevelActive();
         }
       );
 

modes/tmtv/src/toolbarButtons.js

@@ -67,7 +67,7 @@ function _createWwwcPreset(preset, title, subtitle) {
       {
         commandName: 'setWindowLevel',
         commandOptions: {
-          windowLevel: windowLevelPresets[preset],
+          ...windowLevelPresets[preset],
         },
         context: 'CORNERSTONE',
       },
@@ -272,8 +272,7 @@ const toolbarButtons = [
           commandName: 'displayNotification',
           commandOptions: {
             title: 'RectangleROI Threshold Tip',
-            text:
-              'RectangleROI Threshold tool should be used on PT Axial Viewport',
+            text: 'RectangleROI Threshold tool should be used on PT Axial Viewport',
             type: 'info',
           },
         },
@@ -307,9 +306,10 @@ const toolbarButtons = [
       isAction: true, // ?
       renderer: WindowLevelMenuItem,
       items: [
+        _createColormap('HSV', 'hsv'),
         _createColormap('Hot Iron', 'hot_iron'),
         _createColormap('S PET', 's_pet'),
-        _createColormap('Ret Hot', 'red_hot'),
+        _createColormap('Red Hot', 'red_hot'),
         _createColormap('Perfusion', 'perfusion'),
         _createColormap('Rainbow', 'rainbow_2'),
         _createColormap('SUV', 'suv'),

modes/tmtv/src/utils/setFusionActiveVolume.js

@@ -1,6 +1,6 @@
 import { toolGroupIds } from '../initToolGroups';
 
-export default function setEllipticalROIConfiguration(
+export default function setFusionActiveVolume(
   matches,
   toolNames,
   ToolGroupService,
@@ -22,16 +22,32 @@ export default function setEllipticalROIConfiguration(
     return;
   }
 
-  const toolConfig = ToolGroupService.getToolConfiguration(
+  const wlToolConfig = ToolGroupService.getToolConfiguration(
+    toolGroupIds.Fusion,
+    toolNames.WindowLevel
+  );
+
+  const ellipticalToolConfig = ToolGroupService.getToolConfiguration(
     toolGroupIds.Fusion,
     toolNames.EllipticalROI
   );
 
-  const ellipticalROIConfig = {
-    ...toolConfig,
+  const windowLevelConfig = {
+    ...wlToolConfig,
     volumeId: displaySets[0].displaySetInstanceUID,
   };
 
+  const ellipticalROIConfig = {
+    ...ellipticalToolConfig,
+    volumeId: displaySets[0].displaySetInstanceUID,
+  };
+
+  ToolGroupService.setToolConfiguration(
+    toolGroupIds.Fusion,
+    toolNames.WindowLevel,
+    windowLevelConfig
+  );
+
   ToolGroupService.setToolConfiguration(
     toolGroupIds.Fusion,
     toolNames.EllipticalROI,