ohif-viewer/extensions/default/src/DicomWebDataSource/index.js

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import { api } from 'dicomweb-client';
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import {
mapParams,
search as qidoSearch,
seriesInStudy,
processResults,
processSeriesResults,
} from './qido.js';
import {
dicomMetadataStore,
IWebApiDataSource,
utils,
displaySetManager,
} from '@ohif/core';
import getImageId from './utils/getImageId';
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import * as dcmjs from 'dcmjs';
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import { retrieveStudyMetadata } from './retrieveStudyMetadata.js';
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const { naturalizeDataset } = dcmjs.data.DicomMetaDictionary;
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const { urlUtil } = utils;
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/**
*
* @param {string} name - Data source name
* @param {string} wadoUriRoot - Legacy? (potentially unused/replaced)
* @param {string} qidoRoot - Base URL to use for QIDO requests
* @param {string} wadoRoot - Base URL to use for WADO requests
* @param {boolean} qidoSupportsIncludeField - Whether QIDO supports the "Include" option to request additional fields in response
* @param {string} imageRengering - wadors | ? (unsure of where/how this is used)
* @param {string} thumbnailRendering - wadors | ? (unsure of where/how this is used)
* @param {bool} lazyLoadStudy - "enableStudyLazyLoad"; Request series meta async instead of blocking
*/
function createDicomWebApi(dicomWebConfig) {
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const { qidoRoot, wadoRoot, enableStudyLazyLoad } = dicomWebConfig;
const qidoConfig = {
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url: qidoRoot,
// headers: DICOMWeb.getAuthorizationHeader(server),
};
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const wadoConfig = {
url: wadoRoot,
};
// TODO -> Two clients sucks, but its better than 1000.
// TODO -> We'll need to merge auth later.
const qidoDicomWebClient = new api.DICOMwebClient(qidoConfig);
const wadoDicomWebClient = new api.DICOMwebClient(wadoConfig);
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return IWebApiDataSource.create({
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query: {
studies: {
mapParams: mapParams.bind(),
search: async function(origParams) {
const { studyInstanceUid, seriesInstanceUid, ...mappedParams } =
mapParams(origParams) || {};
const results = await qidoSearch(
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qidoDicomWebClient,
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undefined,
undefined,
mappedParams
);
return processResults(results);
},
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processResults: processResults.bind(),
},
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series: {
// mapParams: mapParams.bind(),
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search: async function(studyInstanceUid) {
const results = await seriesInStudy(
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qidoDicomWebClient,
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studyInstanceUid
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);
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return processSeriesResults(results);
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},
// processResults: processResults.bind(),
},
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instances: {
search: (studyInstanceUid, queryParamaters) =>
qidoSearch.call(
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undefined,
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qidoDicomWebClient,
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studyInstanceUid,
null,
queryParamaters
),
},
},
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retrieve: {
series: {
metadata: (queryParams, callback) => {
let { StudyInstanceUIDs } = urlUtil.parse(queryParams, true);
StudyInstanceUIDs = urlUtil.paramString.parseParam(StudyInstanceUIDs);
if (!StudyInstanceUIDs) {
throw new Error(
'Incomplete queryParams, missing StudyInstanceUIDs'
);
}
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const storeInstances = instances => {
const naturalizedInstances = instances.map(naturalizeDataset);
dicomMetadataStore.addInstances(naturalizedInstances);
callback(naturalizedInstances);
};
const studyPromises = StudyInstanceUIDs.map(StudyInstanceUID =>
retrieveStudyMetadata(
wadoDicomWebClient,
StudyInstanceUID,
enableStudyLazyLoad
)
);
studyPromises.forEach(studyPromise => {
studyPromise.then(seriesPromises => {
seriesPromises.forEach(seriesPromise => {
seriesPromise.then(instances => {
storeInstances(instances);
});
});
});
});
},
},
},
getImageIdsForDisplaySet(displaySetInstanceUid) {
const displaySet = displaySetManager.getDisplaySetByUID(
displaySetInstanceUid
);
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const images = displaySet.images;
const imageIds = [];
if (!images) {
return imageIds;
}
displaySet.images.forEach(instance => {
const NumberOfFrames = instance.NumberOfFrames;
if (NumberOfFrames > 1) {
for (let i = 0; i < NumberOfFrames; i++) {
const imageId = getImageId({
instance,
frame: i,
config: dicomWebConfig,
});
imageIds.push(imageId);
}
} else {
const imageId = getImageId({ instance, config: dicomWebConfig });
imageIds.push(imageId);
}
});
return imageIds;
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},
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});
}
export { createDicomWebApi };