ohif-viewer/extensions/dicom-pdf/src/DicomPDFViewport.js

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import React, { Component, createRef } from 'react';
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import dicomParser from 'dicom-parser';
import PDFJS from 'pdfjs-dist';
import PropTypes from 'prop-types';
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import TypedArrayProp from './TypedArrayProp';
import './DicomPDFViewport.css';
import pdfjsBuild from 'pdfjs-dist/build/pdf';
import pdfjsWorker from 'pdfjs-dist/build/pdf.worker.entry';
pdfjsBuild.GlobalWorkerOptions.workerSrc = pdfjsWorker;
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// TODO: Should probably use dcmjs for this
const SOP_CLASS_UIDS = {
fix: 🐛 Add DicomLoaderService & FileLoaderService to fix SR, PDF, and SEG support in local file and WADO-RS-only use cases (#862) * fix: 🐛 Local file: failing when retrieving segmentation data Fix segmentation data retrieval issues for local file. Changed from fecthing to use cornerstone loadAndCache method BREAKING CHANGE: DICOM Seg Closes: part of #838 * Switch SEG retrieval to WADO-RS * Forgot a debugger * refactor: 💡 Code refactor. Minor changes into methods * fix: 🐛 Load local files: PDF Items: 1. FileLoaderService: used for serveral operations on local files(load it, get list of studies, group them, accepting dicom and pdf) 2. DicomLoaderService: used for loading dicom based on dataset and studies. Depending on type of dicom loader might change. WIP 3. Refactor PDF and handleSegmentationStorage to use DicomLoaderService * fix: 🐛 Code review * fix: 🐛 Code review. Changed:Folder organization and dicom file Move fileLoaderService and others to a specific folder. When loading dicom file change to only retrieve the file(not use cornerstone to cache or anything else). * fix: 🐛 Code review. Move dicomLoaderService to core Moved dicomLoaderService to ohif/core and localFileLoaders to a specific folder. * fix: 🐛 Code review Simplified method to get study for dicom file. Added error handling on file loading. DicomLoaderService to be exposed on ohif/core/utils instead. * fix: 🐛 Reduce local load to one method only Reduced local file load to one method only * fix: 🐛 HTML to use dicomLoaderService. Prefer wadors than (uri) * fix: 🐛 Code implementation for multiframe files * fix: 🐛 Code review. Default local loader to dicom Closes: 838 * fix: 🐛 Code review. Use relative path to require DICOMWeb Closes: 838 * fix: 🐛 Code review. Fix unit test. Added DicomLoaderService mod Closes: 838 * fix: 🐛 Code review. Add 'Seg' on left thumb When getting/creating dataset get modality for file/image read Closes: 838
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ENCAPSULATED_PDF: '1.2.840.10008.5.1.4.1.1.104.1',
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};
class DicomPDFViewport extends Component {
constructor(props) {
super(props);
this.state = {
fileURL: null,
error: null,
currentPageIndex: 1,
pdf: null,
scale: 1,
};
this.canvas = createRef();
this.textLayer = createRef();
}
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static propTypes = {
fix: 🐛 Add DicomLoaderService & FileLoaderService to fix SR, PDF, and SEG support in local file and WADO-RS-only use cases (#862) * fix: 🐛 Local file: failing when retrieving segmentation data Fix segmentation data retrieval issues for local file. Changed from fecthing to use cornerstone loadAndCache method BREAKING CHANGE: DICOM Seg Closes: part of #838 * Switch SEG retrieval to WADO-RS * Forgot a debugger * refactor: 💡 Code refactor. Minor changes into methods * fix: 🐛 Load local files: PDF Items: 1. FileLoaderService: used for serveral operations on local files(load it, get list of studies, group them, accepting dicom and pdf) 2. DicomLoaderService: used for loading dicom based on dataset and studies. Depending on type of dicom loader might change. WIP 3. Refactor PDF and handleSegmentationStorage to use DicomLoaderService * fix: 🐛 Code review * fix: 🐛 Code review. Changed:Folder organization and dicom file Move fileLoaderService and others to a specific folder. When loading dicom file change to only retrieve the file(not use cornerstone to cache or anything else). * fix: 🐛 Code review. Move dicomLoaderService to core Moved dicomLoaderService to ohif/core and localFileLoaders to a specific folder. * fix: 🐛 Code review Simplified method to get study for dicom file. Added error handling on file loading. DicomLoaderService to be exposed on ohif/core/utils instead. * fix: 🐛 Reduce local load to one method only Reduced local file load to one method only * fix: 🐛 HTML to use dicomLoaderService. Prefer wadors than (uri) * fix: 🐛 Code implementation for multiframe files * fix: 🐛 Code review. Default local loader to dicom Closes: 838 * fix: 🐛 Code review. Use relative path to require DICOMWeb Closes: 838 * fix: 🐛 Code review. Fix unit test. Added DicomLoaderService mod Closes: 838 * fix: 🐛 Code review. Add 'Seg' on left thumb When getting/creating dataset get modality for file/image read Closes: 838
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byteArray: TypedArrayProp.uint8,
useNative: PropTypes.bool,
viewportData: PropTypes.object,
activeViewportIndex: PropTypes.number,
setViewportActive: PropTypes.func,
viewportIndex: PropTypes.number,
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};
static defaultProps = {
useNative: false,
};
async componentDidMount() {
const dataSet = this.parseByteArray(this.props.byteArray);
const fileURL = this.getPDFFileUrl(dataSet, this.props.byteArray);
this.setState(state => ({ ...state, fileURL }));
if (!this.props.useNative) {
const pdf = await PDFJS.getDocument(fileURL).promise;
this.setState(state => ({ ...state, pdf }), () => this.updatePDFCanvas());
}
}
updatePDFCanvas = async () => {
const { pdf, scale, currentPageIndex } = this.state;
const context = this.canvas.getContext('2d');
const page = await pdf.getPage(currentPageIndex);
let viewport = page.getViewport({ scale });
this.canvas.height = viewport.height;
this.canvas.width = viewport.width;
const renderContext = {
canvasContext: context,
viewport: viewport,
};
await page.render(renderContext);
const textContent = await page.getTextContent();
this.textLayer.innerHTML = '';
this.textLayer.style.height = viewport.height + 'px';
this.textLayer.style.width = viewport.width + 'px';
PDFJS.renderTextLayer({
textContent,
container: this.textLayer,
viewport,
textDivs: [],
});
};
componentDidUpdate(prevProps, prevState) {
const { currentPageIndex, scale } = this.state;
const newValidScale = prevState.scale !== scale && scale > 0;
const newValidPageNumber =
prevState.currentPageIndex !== currentPageIndex && currentPageIndex > 0;
if (newValidScale || newValidPageNumber) {
this.updatePDFCanvas();
}
}
getPDFFileUrl = (dataSet, byteArray) => {
fix: 🐛 Add DicomLoaderService & FileLoaderService to fix SR, PDF, and SEG support in local file and WADO-RS-only use cases (#862) * fix: 🐛 Local file: failing when retrieving segmentation data Fix segmentation data retrieval issues for local file. Changed from fecthing to use cornerstone loadAndCache method BREAKING CHANGE: DICOM Seg Closes: part of #838 * Switch SEG retrieval to WADO-RS * Forgot a debugger * refactor: 💡 Code refactor. Minor changes into methods * fix: 🐛 Load local files: PDF Items: 1. FileLoaderService: used for serveral operations on local files(load it, get list of studies, group them, accepting dicom and pdf) 2. DicomLoaderService: used for loading dicom based on dataset and studies. Depending on type of dicom loader might change. WIP 3. Refactor PDF and handleSegmentationStorage to use DicomLoaderService * fix: 🐛 Code review * fix: 🐛 Code review. Changed:Folder organization and dicom file Move fileLoaderService and others to a specific folder. When loading dicom file change to only retrieve the file(not use cornerstone to cache or anything else). * fix: 🐛 Code review. Move dicomLoaderService to core Moved dicomLoaderService to ohif/core and localFileLoaders to a specific folder. * fix: 🐛 Code review Simplified method to get study for dicom file. Added error handling on file loading. DicomLoaderService to be exposed on ohif/core/utils instead. * fix: 🐛 Reduce local load to one method only Reduced local file load to one method only * fix: 🐛 HTML to use dicomLoaderService. Prefer wadors than (uri) * fix: 🐛 Code implementation for multiframe files * fix: 🐛 Code review. Default local loader to dicom Closes: 838 * fix: 🐛 Code review. Use relative path to require DICOMWeb Closes: 838 * fix: 🐛 Code review. Fix unit test. Added DicomLoaderService mod Closes: 838 * fix: 🐛 Code review. Add 'Seg' on left thumb When getting/creating dataset get modality for file/image read Closes: 838
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let pdfByteArray = byteArray;
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fix: 🐛 Add DicomLoaderService & FileLoaderService to fix SR, PDF, and SEG support in local file and WADO-RS-only use cases (#862) * fix: 🐛 Local file: failing when retrieving segmentation data Fix segmentation data retrieval issues for local file. Changed from fecthing to use cornerstone loadAndCache method BREAKING CHANGE: DICOM Seg Closes: part of #838 * Switch SEG retrieval to WADO-RS * Forgot a debugger * refactor: 💡 Code refactor. Minor changes into methods * fix: 🐛 Load local files: PDF Items: 1. FileLoaderService: used for serveral operations on local files(load it, get list of studies, group them, accepting dicom and pdf) 2. DicomLoaderService: used for loading dicom based on dataset and studies. Depending on type of dicom loader might change. WIP 3. Refactor PDF and handleSegmentationStorage to use DicomLoaderService * fix: 🐛 Code review * fix: 🐛 Code review. Changed:Folder organization and dicom file Move fileLoaderService and others to a specific folder. When loading dicom file change to only retrieve the file(not use cornerstone to cache or anything else). * fix: 🐛 Code review. Move dicomLoaderService to core Moved dicomLoaderService to ohif/core and localFileLoaders to a specific folder. * fix: 🐛 Code review Simplified method to get study for dicom file. Added error handling on file loading. DicomLoaderService to be exposed on ohif/core/utils instead. * fix: 🐛 Reduce local load to one method only Reduced local file load to one method only * fix: 🐛 HTML to use dicomLoaderService. Prefer wadors than (uri) * fix: 🐛 Code implementation for multiframe files * fix: 🐛 Code review. Default local loader to dicom Closes: 838 * fix: 🐛 Code review. Use relative path to require DICOMWeb Closes: 838 * fix: 🐛 Code review. Fix unit test. Added DicomLoaderService mod Closes: 838 * fix: 🐛 Code review. Add 'Seg' on left thumb When getting/creating dataset get modality for file/image read Closes: 838
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if (dataSet) {
const sopClassUid = dataSet.string('x00080016');
if (sopClassUid !== SOP_CLASS_UIDS.ENCAPSULATED_PDF) {
throw new Error('This is not a DICOM-encapsulated PDF');
}
const fileTag = dataSet.elements.x00420011;
const offset = fileTag.dataOffset;
const remainder = offset + fileTag.length;
pdfByteArray = dataSet.byteArray.slice(offset, remainder);
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}
const PDF = new Blob([pdfByteArray], { type: 'application/pdf' });
const fileURL = URL.createObjectURL(PDF);
return fileURL;
};
onPageChange = async event => {
const { currentPageIndex, pdf } = this.state;
let newPageIndex = currentPageIndex;
const action = event.target.getAttribute('data-pager');
if (action === 'prev') {
if (currentPageIndex === 1) {
return;
}
newPageIndex -= 1;
if (currentPageIndex < 0) {
newPageIndex = 0;
}
}
if (action === 'next') {
if (currentPageIndex === pdf.numPages - 1) {
return;
}
newPageIndex += 1;
if (currentPageIndex > pdf.numPages - 1) {
newPageIndex = pdf.numPages - 1;
}
}
this.setState(state => ({ ...state, currentPageIndex: newPageIndex }));
};
onZoomChange = () => {
let newZoomValue = this.state.scale;
const action = event.target.getAttribute('data-pager');
if (action === '+') {
newZoomValue += 0.25;
}
if (action === '-') {
newZoomValue -= 0.25;
}
this.setState(state => ({ ...state, scale: newZoomValue }));
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};
parseByteArray = byteArray => {
const options = { untilTag: '' };
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let dataSet;
try {
dataSet = dicomParser.parseDicom(byteArray, options);
} catch (error) {
this.setState(state => ({ ...state, error }));
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}
return dataSet;
};
setViewportActiveHandler = () => {
const {
setViewportActive,
viewportIndex,
activeViewportIndex,
} = this.props;
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if (viewportIndex !== activeViewportIndex) {
setViewportActive(viewportIndex);
}
};
downloadPDFCanvas = () => {
const { fileURL } = this.state;
const a = document.createElement('a');
a.href = fileURL;
a.download = fileURL.substr(fileURL.lastIndexOf('/') + 1);
document.body.appendChild(a);
a.click();
document.body.removeChild(a);
};
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render() {
const { fileURL, pdf, error } = this.state;
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return (
<div
className={'DicomPDFViewport'}
onClick={this.setViewportActiveHandler}
onScroll={this.setViewportActiveHandler}
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style={{ width: '100%', height: '100%' }}
>
{!this.props.useNative ? (
<>
<div id="toolbar">
<div id="pager">
{pdf && pdf.numPages > 1 && (
<>
<button data-pager="prev" onClick={this.onPageChange}>
{`<`}
</button>
<button data-pager="next" onClick={this.onPageChange}>
{`>`}
</button>
</>
)}
<button data-pager="-" onClick={this.onZoomChange}>
{`-`}
</button>
<button data-pager="+" onClick={this.onZoomChange}>
{`+`}
</button>
<button onClick={this.downloadPDFCanvas}>Download</button>
</div>
</div>
<div id="canvas">
<div id="pdf-canvas-container">
<canvas
id="pdf-canvas"
ref={canvas => (this.canvas = canvas)}
/>
<div
id="text-layer"
ref={textLayer => (this.textLayer = textLayer)}
></div>
</div>
</div>
</>
) : (
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<object
aria-label="PDF Viewer"
data={fileURL}
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type="application/pdf"
width="100%"
height="100%"
/>
)}
{error && <h2>{JSON.stringify(error)}</h2>}
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</div>
);
}
}
export default DicomPDFViewport;